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BRAIN BASAL GANGLIA Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS MEDULLA OBLONGATA
MIDBRAIN OLFACTORY BULB PITUITARY GLAND PONS RETINA SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
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VALIDATION
Brain proteome
Basal ganglia
BASAL GANGLIA - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:229.2 nTPM
HPA Brain:494.0 nTPM
GTEx:229.2 nTPM
FANTOM5:431.8 Scaled Tags Per Million
Pig:115.7 nTPM

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA042380
Glial cells Not detected
Neuronal cells Not detected



BASAL GANGLIA - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

494.0
Sample id Sample description nTPM
Caudate nucleus
nTPM: 315.3
2288 Male, age 75, left hemisphere 370.3
1857 Female, age 85, left hemisphere 338.9
1854 Male, age 80, left hemisphere 331.4
2290 Female, age 72, unknown 326.1
2481 Female, age 94, left hemisphere 323.5
2846 Female, age 79, unknown 288.6
1781 Male, age 74, unknown 277.7
2289 Male, age 61, right hemisphere 266.0
Globus pallidus, externus
nTPM: 494.0
1996 Male, age 80, right hemisphere 663.9
2646 Male, age 61, right hemisphere 505.8
2772 Female, age 79, unknown 478.8
2567 Female, age 72, unknown 410.9
2395 Male, age 75, both hemispheres 410.8
Globus pallidus, internus
nTPM: 475.5
2037 Male, age 80, right hemisphere 556.0
1818 Male, age 74, unknown 496.9
2483 Female, age 94, right hemisphere 488.7
2287 Male, age 75, right hemisphere 482.7
2111 Female, age 85, right hemisphere 475.4
2778 Female, age 91, both hemispheres 422.5
2566 Female, age 72, unknown 406.6
Nucleus accumbens
nTPM: 329.5
2286 Male, age 75, left hemisphere 400.4
2698 Female, age 72, unknown 372.0
2732 Male, age 80, right hemisphere 359.7
1806 Female, age 85, left hemisphere 342.1
2824 Male, age 61, right hemisphere 308.6
2391 Female, age 94, left hemisphere 306.6
1783 Male, age 74, unknown 288.8
1856 Female, age 91, right hemisphere 258.0
Nucleus basalis of Meynert
nTPM: 353.4
2569 Male, age 61, both hemispheres 528.1
2393 Male, age 80, right hemisphere 302.9
2821 Male, age 75, both hemispheres 295.4
2484 Female, age 94, left hemisphere 287.2
Nucleus of the diagonal band
nTPM: 309.5
2195 Female, age 85, both hemispheres 317.5
2775 Male, age 80, right hemisphere 317.2
1979 Male, age 74, unknown 311.1
2029 Male, age 61, right hemisphere 305.1
1812 Female, age 91, both hemispheres 296.7
Putamen
nTPM: 287.1
1829 Male, age 74, unknown 337.7
2482 Female, age 94, left hemisphere 312.2
1838 Male, age 80, right hemisphere 287.4
2647 Male, age 75, left hemisphere 278.7
1937 Female, age 91, right hemisphere 273.7
2466 Female, age 79, unknown 262.7
2489 Female, age 72, unknown 257.5
Septal nuclei
nTPM: 330.8
2394 Male, age 61, left hemisphere 386.8
2199 Male, age 80, right hemisphere 375.1
2059 Female, age 85, both hemispheres 356.1
2031 Female, age 72, unknown 313.1
1960 Male, age 74, unknown 308.3
2629 Female, age 94, right hemisphere 300.4
2009 Female, age 91, both hemispheres 275.5
Stria terminalis, bed nucleus
nTPM: 309.0
2201 Male, age 74, unknown 352.0
1974 Female, age 91, both hemispheres 297.8
2486 Female, age 94, both hemispheres 277.1

BASAL GANGLIA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

229.2
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 214.6
Samples: 246

Max nTPM: 393.4
Min nTPM: 105.8
Std nTPM: 47.6
Median nTPM: 207.4
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 393.4
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 365.0
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 356.1
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 344.5
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 335.2
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 331.5
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 330.3
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 327.6
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 322.3
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 316.7
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 310.9
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 310.0
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 305.9
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 304.7
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 302.6
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 300.1
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 294.6
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 292.5
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 287.6
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 284.8
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 283.3
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 282.0
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 281.7
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 277.3
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 276.3
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 275.7
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 274.2
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 271.9
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 271.2
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 270.0
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 269.5
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 269.2
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 265.0
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 264.8
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 263.5
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 263.2
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 260.7
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 257.5
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 256.6
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 256.6
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 254.5
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 254.4
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 253.5
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 253.1
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 251.1
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 250.9
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 250.8
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 249.4
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 249.2
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 248.9
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 248.0
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 248.0
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 247.2
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 246.9
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 245.3
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 244.8
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 244.5
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 244.0
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 241.4
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 240.7
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 240.7
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 240.0
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 239.5
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 238.6
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 238.1
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 237.9
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 237.3
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 237.2
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 236.4
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 236.1
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 235.8
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 235.8
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 235.1
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 232.9
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 232.0
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 230.9
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 230.3
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 229.8
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 229.5
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 229.3
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 228.8
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 228.2
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 228.0
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 227.9
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 226.7
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 226.7
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 226.6
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 226.0
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 225.6
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 225.1
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 224.0
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 223.9
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 223.7
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 223.6
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 222.9
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 222.5
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 221.5
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 221.3
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 220.6
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 219.4
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 218.9
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 218.4
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 218.2
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 217.9
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 216.8
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 216.5
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 216.4
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 216.3
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 215.7
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 215.6
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 215.1
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 214.2
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 213.5
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 212.7
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 212.1
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 212.0
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 211.5
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 210.9
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 210.2
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 210.0
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 208.2
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 207.5
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 207.4
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 207.4
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 206.7
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 206.1
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 206.0
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 205.5
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 204.4
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 204.3
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 203.9
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 203.4
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 203.3
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 203.0
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 202.9
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 202.8
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 202.4
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 202.3
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 201.7
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 201.3
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 201.2
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 201.1
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 200.8
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 200.7
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 200.6
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 200.4
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 200.0
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 199.3
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 199.1
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 199.0
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 199.0
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 198.2
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 197.2
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 197.2
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 196.6
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 195.9
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 195.5
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 195.0
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 194.2
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 193.0
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 193.0
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 192.8
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 192.1
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 191.7
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 191.6
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 191.4
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 190.8
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 190.0
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 189.7
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 189.5
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 188.6
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 188.6
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 188.0
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 187.6
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 187.5
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 186.8
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 186.4
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 186.3
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 185.9
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 185.7
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 185.5
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 185.5
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 185.0
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 185.0
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 183.3
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 182.7
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 182.2
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 181.7
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 181.5
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 181.3
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 180.9
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 180.6
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 180.2
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 178.7
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 177.5
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 176.7
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 175.2
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 175.2
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 175.2
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 175.1
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 174.1
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 173.3
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 172.4
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 172.3
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 171.6
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 170.8
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 169.9
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 167.8
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 167.6
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 167.6
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 166.2
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 165.5
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 163.8
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 162.9
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 162.2
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 160.9
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 160.8
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 159.6
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 158.9
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 158.8
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 158.8
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 157.6
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 156.3
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 156.2
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 155.3
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 154.8
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 154.2
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 153.8
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 153.4
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 153.3
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 153.2
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 151.2
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 150.4
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 148.3
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 147.1
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 146.5
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 146.1
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 144.7
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 141.1
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 139.3
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 137.7
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 132.8
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 130.1
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 125.2
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 109.7
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 105.8
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Brain - Nucleus accumbens (basal ganglia)
Average nTPM: 215.6
Samples: 246

Max nTPM: 456.4
Min nTPM: 97.1
Std nTPM: 65.6
Median nTPM: 201.0
GTEX-11GSP-0011-R6b-SM-57WBQ 60-69 years, female 456.4
GTEX-1RLM8-0011-R6a-SM-EYYXS 50-59 years, male 449.8
GTEX-14753-0011-R6b-SM-5S2UD 60-69 years, male 426.0
GTEX-X261-0011-R6B-SM-4E3J8 50-59 years, male 406.3
GTEX-1EN7A-0011-R6b-SM-9QEHW 40-49 years, male 404.0
GTEX-145MI-0011-R6a-SM-5PNZA 60-69 years, female 394.0
GTEX-13OVJ-0011-R6b-SM-5L3GH 50-59 years, female 391.9
GTEX-147F4-0011-R6b-SM-5S2UP 50-59 years, male 380.6
GTEX-1HFI6-0011-R6b-SM-CM2SR 40-49 years, male 373.6
GTEX-ZV68-0011-R6a-SM-51MSR 50-59 years, female 363.7
GTEX-1H3O1-0011-R6b-SM-CL54U 60-69 years, male 362.5
GTEX-12584-0011-R6a-SM-5NQ7C 40-49 years, male 352.3
GTEX-1EKGG-0011-R6a-SM-CL538 60-69 years, male 347.5
GTEX-15EO6-0011-R6a-SM-7KULK 50-59 years, male 341.7
GTEX-1445S-0011-R6b-SM-5PNUF 60-69 years, male 341.3
GTEX-1GN2E-0011-R6b-SM-9QEII 60-69 years, male 339.3
GTEX-QDT8-0011-R6A-SM-32PKI 30-39 years, female 337.1
GTEX-1LC47-0011-R6b-SM-EZ6MI 60-69 years, male 335.4
GTEX-16XZZ-0011-R6a-SM-7IGNE 60-69 years, male 333.9
GTEX-1GZ2Q-0011-R6a-SM-9OSWM 40-49 years, male 326.0
GTEX-11DYG-0011-R6a-SM-DO936 60-69 years, male 311.8
GTEX-13PL6-0011-R6a-SM-5O9C5 40-49 years, female 306.3
GTEX-1A8G6-0011-R6b-SM-7P8PE 60-69 years, male 305.9
GTEX-1C6WA-0011-R6a-SM-7PBYP 60-69 years, male 302.0
GTEX-1LVA9-0011-R6a-SM-EYYWH 50-59 years, male 298.5
GTEX-1H23P-0011-R6b-SM-A9G1H 60-69 years, male 296.5
GTEX-139TT-0011-R6b-SM-5J2ON 60-69 years, male 295.1
GTEX-1HBPM-0011-R6b-SM-ARU73 60-69 years, female 294.0
GTEX-1192X-0011-R6a-SM-DNZZB 50-59 years, male 293.7
GTEX-15DYW-0011-R6b-SM-6PALA 60-69 years, female 289.0
GTEX-1CB4H-0011-R6b-SM-CKZNK 60-69 years, female 287.4
GTEX-1LB8K-0011-R6a-SM-EXURT 50-59 years, male 287.2
GTEX-S7PM-0011-R6A-SM-3NM8F 60-69 years, male 286.4
GTEX-131XW-0011-R6b-SM-5K7XY 50-59 years, female 283.6
GTEX-17JCI-0011-R6a-SM-72D6D 60-69 years, female 280.5
GTEX-13OW5-0011-R6b-SM-5O9BW 60-69 years, male 280.4
GTEX-ZAB4-0011-R6a-SM-4SOKD 40-49 years, male 279.9
GTEX-P44H-0011-R6A-SM-2XCF3 40-49 years, male 277.4
GTEX-13JVG-0011-R6a-SM-5MR3E 60-69 years, male 276.8
GTEX-ZVT3-0011-R6a-SM-51MSU 60-69 years, female 275.7
GTEX-1R46S-0011-R6a-SM-EZ6N6 60-69 years, female 275.2
GTEX-1I1HK-0011-R6b-SM-CM2T9 60-69 years, male 273.4
GTEX-11NUK-0011-R6a-SM-DO93O 50-59 years, male 272.9
GTEX-1GMR8-0011-R6b-SM-CE6RC 50-59 years, female 271.8
GTEX-1F75B-0011-R6a-SM-ARZMI 50-59 years, male 269.2
GTEX-1IKOH-0011-R6b-SM-A9G1W 60-69 years, female 266.1
GTEX-QVUS-0011-R6A-SM-3GACX 60-69 years, female 265.9
GTEX-1C64N-0011-R6a-SM-7IGO9 50-59 years, male 264.2
GTEX-13N1W-0011-R6a-SM-5MR43 70-79 years, male 263.9
GTEX-YFC4-0011-R6b-SM-4V6E1 40-49 years, female 263.5
GTEX-1H1ZS-0011-R6b-SM-A9G1F 70-79 years, male 262.9
GTEX-139TS-0011-R6a-SM-5J2OB 60-69 years, male 259.5
GTEX-11ONC-0011-R6a-SM-DO12A 60-69 years, male 259.5
GTEX-13SLX-0011-R6a-SM-5PNX4 50-59 years, female 259.3
GTEX-1N2DW-0011-R6a-SM-EZ6MW 50-59 years, male 259.2
GTEX-1H4P4-0011-R6a-SM-ARZLR 50-59 years, male 258.8
GTEX-1H3VE-0011-R6b-SM-A9G1M 40-49 years, male 257.6
GTEX-1E1VI-0011-R6a-SM-9OSVJ 50-59 years, male 255.8
GTEX-ZE7O-0011-R6a-SM-57WCI 50-59 years, female 252.3
GTEX-17HG3-0011-R6b-SM-79OK8 30-39 years, female 251.6
GTEX-1GF9V-0011-R6b-SM-CJI2Q 60-69 years, male 251.5
GTEX-13OW8-0011-R6b-SM-5L3I3 60-69 years, male 247.0
GTEX-1EH9U-0011-R6a-SM-CJI2C 60-69 years, male 246.7
GTEX-1MJK2-0011-R6a-SM-EXUS3 50-59 years, male 246.5
GTEX-13JUV-0011-R6b-SM-5LZYG 40-49 years, female 245.9
GTEX-11WQC-0011-R6a-SM-5BC77 60-69 years, male 245.8
GTEX-144GO-0011-R6b-SM-5S2V7 60-69 years, male 242.8
GTEX-1A3MX-0011-R6a-SM-7P8S9 60-69 years, male 241.4
GTEX-13G51-0011-R6b-SM-5LZX4 60-69 years, male 239.2
GTEX-14E7W-0011-R6b-SM-5ZZV3 70-79 years, male 238.1
GTEX-15DCD-0011-R6b-SM-6M46L 70-79 years, female 237.9
GTEX-ZVZQ-0011-R6b-SM-57WAY 60-69 years, female 237.8
GTEX-1HBPH-0011-R6a-SM-CKZOV 40-49 years, female 236.5
GTEX-1I19N-0011-R6b-SM-CY8GC 70-79 years, male 235.7
GTEX-1F48J-0011-R6a-SM-CJI2F 50-59 years, female 235.1
GTEX-1JJEA-0011-R6a-SM-EXUS1 60-69 years, male 234.6
GTEX-14LZ3-0011-R6a-SM-D3L8C 60-69 years, female 232.2
GTEX-145LU-0011-R6a-SM-5S2V6 50-59 years, male 232.0
GTEX-1HBPI-0011-R6b-SM-A9G1T 50-59 years, male 231.8
GTEX-13QJC-0011-R6a-SM-5S2VI 60-69 years, female 231.3
GTEX-145MH-0011-R6a-SM-5PNZ7 50-59 years, male 230.8
GTEX-ZUA1-0011-R6b-SM-4YCDD 40-49 years, male 229.9
GTEX-1I1GR-0011-R6a-SM-CMKHI 60-69 years, male 229.5
GTEX-1GZ4I-0011-R6b-SM-9WG77 50-59 years, male 226.4
GTEX-T2IS-0011-R6A-SM-32QP2 20-29 years, female 223.7
GTEX-1IKK5-0011-R6b-SM-A9SLY 60-69 years, male 221.4
GTEX-QMR6-0011-R6A-SM-32PKP 50-59 years, male 219.8
GTEX-11DXW-0011-R6a-SM-DO11N 40-49 years, male 219.5
GTEX-WVLH-0011-R6A-SM-3MJFZ 50-59 years, male 219.3
GTEX-1399T-0011-R6b-SM-5K7YL 60-69 years, male 219.1
GTEX-1CB4G-0011-R6b-SM-9QEGO 60-69 years, male 218.8
GTEX-13FLV-0011-R6a-SM-5KLZ4 50-59 years, male 218.7
GTEX-1I1GS-0011-R6b-SM-CMKHE 60-69 years, male 218.6
GTEX-14PHW-0011-R6b-SM-5YYAR 60-69 years, female 218.0
GTEX-147GR-0011-R6b-SM-5S2RO 60-69 years, male 217.5
GTEX-1EMGI-0011-R6a-SM-9OSVR 60-69 years, male 217.5
GTEX-13FXS-0011-R6b-SM-5L3F7 50-59 years, male 217.1
GTEX-ZXG5-0011-R6a-SM-57WBZ 60-69 years, male 216.6
GTEX-1CB4J-0011-R6b-SM-9WG7B 60-69 years, male 216.6
GTEX-11O72-0011-R6a-SM-DNZZQ 40-49 years, male 216.0
GTEX-12ZZZ-0011-R6b-SM-5EQ5B 60-69 years, male 215.2
GTEX-1EWIQ-0011-R6a-SM-ARU8G 70-79 years, female 215.0
GTEX-14ABY-0011-R6a-SM-5PNWR 50-59 years, male 214.7
GTEX-131XH-0011-R6a-SM-5KM2G 50-59 years, male 212.9
GTEX-18465-0011-R6a-SM-7LG6M 50-59 years, male 212.9
GTEX-1GN1U-0011-R6a-SM-CKZNO 50-59 years, female 211.5
GTEX-Q2AG-0011-R6A-SM-2HML7 40-49 years, female 210.9
GTEX-WL46-0011-R6A-SM-3LK6X 50-59 years, male 210.9
GTEX-1B8SF-0011-R6b-SM-7MXUD 60-69 years, male 210.5
GTEX-1EX96-0011-R6a-SM-9OSVV 50-59 years, male 209.2
GTEX-11OF3-0011-R6b-SM-57WBG 60-69 years, male 206.8
GTEX-TSE9-0011-R6A-SM-3DB7L 60-69 years, female 206.3
GTEX-13112-0011-R6b-SM-5DUVK 50-59 years, male 206.2
GTEX-13OVH-0011-R6b-SM-5LUAX 70-79 years, male 204.2
GTEX-14BIM-0011-R6b-SM-5S2VB 60-69 years, female 203.8
GTEX-14JG1-0011-R6b-SM-5YYAU 40-49 years, male 203.8
GTEX-11NV4-0011-R6a-SM-57WD5 60-69 years, male 203.7
GTEX-12ZZY-0011-R6b-SM-5EGLA 60-69 years, male 202.8
GTEX-UTHO-0011-R6A-SM-3GIJW 60-69 years, male 202.5
GTEX-1IY9M-0011-R6a-SM-D4P28 60-69 years, male 202.3
GTEX-1MA7X-0011-R6a-SM-EYYWR 60-69 years, male 202.3
GTEX-Y8DK-0011-R6A-SM-4V6EG 60-69 years, male 201.6
GTEX-WZTO-0011-R6B-SM-4E3J6 40-49 years, male 201.5
GTEX-1J8Q2-0011-R6a-SM-CKZPG 60-69 years, male 200.5
GTEX-13FHP-0011-R6b-SM-5LZY6 50-59 years, male 200.2
GTEX-15G19-0011-R6b-SM-7KUM3 60-69 years, male 197.5
GTEX-1H1CY-0011-R6b-SM-CE6RP 60-69 years, female 196.9
GTEX-13X6K-0011-R6a-SM-5P9K6 60-69 years, female 196.8
GTEX-1LVAO-0011-R6b-SM-EZ6MX 60-69 years, male 196.7
GTEX-1IL2U-0011-R6a-SM-ARZLG 60-69 years, male 196.3
GTEX-13X6J-0011-R6a-SM-5PNUB 50-59 years, male 195.6
GTEX-17HHY-0011-R6b-SM-7189Z 50-59 years, male 195.5
GTEX-15ER7-0011-R6a-SM-6M46M 20-29 years, female 195.3
GTEX-YJ89-0011-R6a-SM-4V6GN 60-69 years, male 195.1
GTEX-12ZZW-0011-R6a-SM-5DUVZ 50-59 years, male 195.0
GTEX-T6MN-0011-R6A-SM-32QP8 50-59 years, male 194.9
GTEX-1IGQW-0011-R6a-SM-CM2TC 60-69 years, male 194.9
GTEX-14PN4-0011-R6b-SM-69LQU 50-59 years, male 194.8
GTEX-11PRG-0011-R6b-SM-DO923 50-59 years, male 194.8
GTEX-1HT8W-0011-R6a-SM-CM2SY 30-39 years, male 194.0
GTEX-1I1GQ-0011-R6b-SM-CE6SE 50-59 years, male 194.0
GTEX-1F6IF-0011-R6a-SM-9QEIO 60-69 years, male 193.5
GTEX-13NYS-0011-R6b-SM-5MR3R 60-69 years, male 192.7
GTEX-13NYB-0011-R6b-SM-5MR51 40-49 years, male 192.2
GTEX-1HUB1-0011-R6b-SM-ARU6W 60-69 years, male 191.5
GTEX-1JMLX-0011-R6b-SM-EXUT9 50-59 years, male 191.5
GTEX-1F6I4-0011-R6a-SM-CE6R4 60-69 years, male 191.2
GTEX-12WSM-0011-R6b-SM-5EQ6N 60-69 years, male 191.0
GTEX-1H1DG-0011-R6a-SM-A9SK8 70-79 years, male 191.0
GTEX-1C6VR-0011-R6a-SM-7MXU8 60-69 years, male 190.4
GTEX-1BAJH-0011-R6b-SM-7MXT2 70-79 years, male 189.7
GTEX-1GF9W-0011-R6b-SM-9QEIE 60-69 years, male 189.0
GTEX-13OW6-0011-R6b-SM-5L3GR 50-59 years, male 187.9
GTEX-13OVL-0011-R6a-SM-5L3G4 50-59 years, male 187.5
GTEX-1IDJH-0011-R6a-SM-A9SLZ 70-79 years, male 186.7
GTEX-NL4W-0011-R6a-SM-2I3GA 50-59 years, male 186.2
GTEX-13O3O-0011-R6b-SM-5P9GY 60-69 years, female 185.8
GTEX-13SLW-0011-R6a-SM-5O9BH 70-79 years, male 185.6
GTEX-14C5O-0011-R6a-SM-5YYB6 60-69 years, male 185.4
GTEX-11TTK-0011-R6b-SM-DNZZW 60-69 years, female 185.1
GTEX-16Z82-0011-R6a-SM-7IGLV 60-69 years, male 183.1
GTEX-1AX9I-0011-R6a-SM-7P8PK 60-69 years, male 183.0
GTEX-13N2G-0011-R6b-SM-5MR3P 60-69 years, male 182.3
GTEX-1GMRU-0011-R6b-SM-A9G3B 50-59 years, male 182.3
GTEX-12WSE-0011-R6b-SM-5LZV5 20-29 years, male 181.6
GTEX-13FLW-0011-R6b-SM-5L3EN 50-59 years, male 181.3
GTEX-14PJM-0011-R6a-SM-6872G 50-59 years, female 181.0
GTEX-ZDXO-0011-R6a-SM-4WWCT 60-69 years, male 179.8
GTEX-1GTWX-0011-R6a-SM-A96RN 60-69 years, male 178.7
GTEX-15CHQ-0011-R6b-SM-69LOX 60-69 years, male 178.4
GTEX-16YQH-0011-R6b-SM-7938T 30-39 years, male 178.1
GTEX-S7SE-0011-R6A-SM-2XCD9 50-59 years, male 178.1
GTEX-1OJC4-0011-R6a-SM-EXOIM 50-59 years, female 177.1
GTEX-1B8L1-0011-R6b-SM-7P8SU 60-69 years, male 175.9
GTEX-12ZZX-0011-R6a-SM-5HL8L 40-49 years, female 174.9
GTEX-14ASI-0011-R6a-SM-5S2UZ 60-69 years, male 174.9
GTEX-17MF6-0011-R6b-SM-7LG6G 40-49 years, male 174.7
GTEX-1HGF4-0011-R6a-SM-A96S1 60-69 years, male 174.6
GTEX-RU72-0011-R6A-SM-2TF71 50-59 years, female 174.2
GTEX-17EVP-0011-R6b-SM-7LT99 40-49 years, male 173.2
GTEX-13O3Q-0011-R6a-SM-5KM2V 50-59 years, male 172.8
GTEX-WHSE-0011-R6A-SM-3P5ZP 20-29 years, male 171.7
GTEX-1J1OQ-0011-R6a-SM-ARU86 40-49 years, female 171.3
GTEX-P44G-0011-R6A-SM-2XCD3 30-39 years, male 171.0
GTEX-X4XX-0011-R6B-SM-46MWP 60-69 years, male 170.3
GTEX-12WSH-0011-R6b-SM-5P9F4 50-59 years, male 169.4
GTEX-18A6Q-0011-R6a-SM-7LG6R 60-69 years, male 169.0
GTEX-PWO3-0011-R6A-SM-2I5F3 60-69 years, female 168.0
GTEX-N7MT-0011-R6a-SM-2I3G3 60-69 years, female 167.3
GTEX-NPJ7-0011-R6a-SM-2I3G7 60-69 years, female 167.1
GTEX-13VXU-0011-R6a-SM-5SI71 50-59 years, male 166.9
GTEX-1I1GV-0011-R6b-SM-ARU6Q 60-69 years, male 166.8
GTEX-ZE9C-0011-R6a-SM-4WWCW 60-69 years, male 166.7
GTEX-1E2YA-0011-R6b-SM-CE6R2 50-59 years, male 166.5
GTEX-14BMV-0011-R6b-SM-5YY9I 50-59 years, male 165.1
GTEX-1HR9M-0011-R6a-SM-ARU6Z 60-69 years, male 164.2
GTEX-WWYW-0011-R6A-SM-3NB3G 50-59 years, female 163.3
GTEX-1GZHY-0011-R6a-SM-9OSWL 50-59 years, female 160.0
GTEX-1ICLZ-0011-R6b-SM-A9G3A 60-69 years, male 159.7
GTEX-1HB9E-0011-R6b-SM-A9G1P 50-59 years, male 159.0
GTEX-145LS-0011-R6b-SM-5PNWL 60-69 years, female 158.5
GTEX-11DZ1-0011-R6b-SM-DNZZG 50-59 years, male 158.2
GTEX-11DXY-0011-R6a-SM-DNZZF 60-69 years, male 156.8
GTEX-144GL-0011-R6a-SM-5P9HW 50-59 years, male 155.8
GTEX-12WSC-0011-R6b-SM-5LU99 50-59 years, male 155.0
GTEX-ZF28-0011-R6a-SM-4WKHI 60-69 years, male 154.3
GTEX-13FHO-0011-R6b-SM-5LZX1 60-69 years, male 154.1
GTEX-13PDP-0011-R6b-SM-5O9D5 60-69 years, male 154.0
GTEX-N7MS-0011-R6a-SM-2HMJ4 60-69 years, male 153.6
GTEX-1F75A-0011-R6b-SM-9QEHD 50-59 years, male 152.8
GTEX-15RJE-0011-R6a-SM-7DHL8 40-49 years, male 151.5
GTEX-12WSD-0011-R6b-SM-5P9JU 60-69 years, female 150.5
GTEX-NPJ8-0011-R6a-SM-2HMKB 40-49 years, male 150.5
GTEX-1GN73-0011-R6b-SM-CJI2T 60-69 years, male 150.1
GTEX-17F97-0011-R6a-SM-7EPGS 50-59 years, male 149.5
GTEX-1H3NZ-0011-R6b-SM-A9G1N 60-69 years, male 149.1
GTEX-14JIY-0011-R6b-SM-68714 60-69 years, male 147.7
GTEX-13IVO-0011-R6b-SM-5K7X9 70-79 years, male 147.6
GTEX-1313W-0011-R6a-SM-5K7XO 50-59 years, female 146.8
GTEX-13RTJ-0011-R6a-SM-5SI74 60-69 years, male 146.7
GTEX-1B996-0011-R6b-SM-793AQ 60-69 years, male 146.7
GTEX-XLM4-0011-R6A-SM-4AT4B 60-69 years, male 146.2
GTEX-1F7RK-0011-R6b-SM-ARZMG 20-29 years, female 145.4
GTEX-1F75W-0011-R6a-SM-9QEI5 60-69 years, male 145.2
GTEX-NL3H-0011-R6a-SM-2I3G8 60-69 years, male 145.1
GTEX-XMD1-0011-R6A-SM-4AT5K 60-69 years, male 144.2
GTEX-1B933-0011-R6b-SM-79OOQ 50-59 years, female 144.1
GTEX-1LH75-0011-R6a-SM-EXURS 50-59 years, female 143.7
GTEX-Z93S-0011-R6b-SM-4RGNJ 50-59 years, male 141.8
GTEX-1F88E-0011-R6a-SM-CKZNW 60-69 years, female 140.7
GTEX-13S7M-0011-R6b-SM-5O9D8 60-69 years, female 139.8
GTEX-183WM-0011-R6b-SM-72D66 70-79 years, female 139.1
GTEX-132Q8-0011-R6a-SM-5K7YN 60-69 years, male 138.4
GTEX-1I1CD-0011-R6b-SM-CJI3Y 60-69 years, female 137.0
GTEX-QVJO-0011-R6A-SM-2S1QN 60-69 years, female 136.3
GTEX-18464-0011-R6a-SM-731CA 50-59 years, male 131.2
GTEX-T5JC-0011-R6A-SM-D3L87 20-29 years, male 130.1
GTEX-12WSF-0011-R6b-SM-5HL8W 70-79 years, male 128.2
GTEX-OHPN-0011-R6A-SM-2I5FH 60-69 years, female 125.4
GTEX-14PQA-0011-R6b-SM-6AJAM 50-59 years, female 124.8
GTEX-X4XY-0011-R6B-SM-46MVB 60-69 years, male 123.6
GTEX-14BIN-0011-R6a-SM-5S2RH 50-59 years, female 123.0
GTEX-17EVQ-0011-R6a-SM-7189U 70-79 years, male 120.0
GTEX-R55E-0011-R6A-SM-2TC5T 20-29 years, male 114.1
GTEX-X4EP-0011-R6A-SM-3P629 60-69 years, female 104.5
GTEX-X585-0011-R6A-SM-46MVJ 50-59 years, male 97.1
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Brain - Putamen (basal ganglia)
Average nTPM: 229.2
Samples: 205

Max nTPM: 366.8
Min nTPM: 126.0
Std nTPM: 45.0
Median nTPM: 220.7
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 366.8
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 360.0
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 354.3
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 346.0
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 345.3
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 345.2
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 344.8
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 342.2
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 329.8
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 328.8
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 314.8
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 306.7
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 305.1
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 300.3
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 300.3
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 296.9
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 294.6
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 294.5
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 293.2
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 291.3
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 287.2
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 287.1
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 286.7
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 285.1
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 284.8
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 282.4
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 280.2
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 277.9
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 275.7
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 275.4
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 274.7
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 273.8
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 273.5
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 273.3
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 272.7
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 272.4
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 272.1
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 272.0
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 271.8
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 269.4
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 269.1
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 268.1
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 266.3
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 265.9
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 263.8
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 260.7
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 258.4
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 258.3
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 257.9
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 257.7
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 257.3
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 256.4
GTEX-1IOXB-0011-R7b-SM-CE6SM 50-59 years, male 255.7
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 250.1
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 248.3
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 247.9
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 247.5
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 247.3
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 247.2
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 246.8
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 246.5
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 245.0
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 244.0
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 243.6
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 242.6
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 241.2
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 240.7
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 240.4
GTEX-P44G-0011-R7A-SM-2I3F9 30-39 years, male 240.4
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 240.3
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 238.0
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 237.8
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 237.3
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 237.0
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 235.6
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 235.6
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 235.5
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 234.1
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 233.2
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 232.7
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 232.1
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 231.2
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 231.1
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 230.8
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 229.4
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 229.4
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 229.2
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 228.5
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 228.5
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 228.3
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 228.1
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 228.0
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 227.7
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 227.0
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 226.9
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 225.8
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 225.0
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 223.3
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 223.1
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 222.4
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 221.5
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 221.0
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 220.7
GTEX-TSE9-0011-R7A-SM-3DB7P 60-69 years, female 220.6
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 220.6
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 220.5
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 220.5
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 220.3
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 219.9
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 218.7
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 218.6
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 217.9
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 217.4
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 217.2
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 216.7
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 215.9
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 215.8
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 214.1
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 213.3
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 213.1
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 212.1
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 211.7
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 211.5
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 210.4
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 210.3
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 210.2
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 210.1
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 209.9
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 209.3
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 208.6
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 208.5
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 207.9
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 207.8
GTEX-N7MS-0011-R7a-SM-2HMKN 60-69 years, male 206.5
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 206.2
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 206.1
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 206.0
GTEX-1J1OQ-0011-R7b-SM-ARU87 40-49 years, female 205.9
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 205.8
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 205.6
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 205.6
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 205.2
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 204.5
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 203.5
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 203.3
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 203.3
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 203.2
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 202.5
GTEX-NL3H-0011-R7a-SM-2I3G5 60-69 years, male 202.4
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 202.0
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 202.0
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 201.9
GTEX-18464-0011-R7b-SM-731CM 50-59 years, male 201.8
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 201.3
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 200.8
GTEX-NPJ8-0011-R7a-SM-2HMJV 40-49 years, male 200.6
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 200.1
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 199.6
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 199.3
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 199.3
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 197.9
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 196.9
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 196.7
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 195.7
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 195.2
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 194.7
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 194.4
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 194.4
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 192.4
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 191.0
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 189.8
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 189.5
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 187.6
GTEX-S7SE-0011-R7A-SM-2XCDI 50-59 years, male 185.1
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 183.3
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 182.4
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 182.3
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 182.2
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 181.9
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 181.5
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 180.1
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 179.8
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 178.2
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 175.9
GTEX-RU72-0011-R7A-SM-2TF5U 50-59 years, female 175.5
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 174.8
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 174.7
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 172.1
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 171.0
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 168.9
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 168.9
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 168.6
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 166.9
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 166.1
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 165.2
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 165.2
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 164.4
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 162.1
GTEX-OHPN-0011-R7A-SM-2I5FI 60-69 years, female 159.5
GTEX-QVJO-0011-R7A-SM-2S1QO 60-69 years, female 159.4
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 156.7
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 155.4
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 153.7
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 151.8
GTEX-R55E-0011-R7A-SM-2TC5Z 20-29 years, male 126.0
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BASAL GANGLIA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

431.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 394.5
FF:10164-103B2 76 years, female 394.5
Nucleus accumbens
Scaled Tags Per Million: 431.8
FF:10037-101F1 23-56 years, mixed 431.8
Putamen
Scaled Tags Per Million: 373.5
FF:10176-103C5 60 years, female 373.5
Globus pallidus
Scaled Tags Per Million: 393.3
FF:10161-103A8 76 years, female 483.0
FF:10175-103C4 60 years, female 303.7

BASAL GANGLIA - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

115.7
Pig sample Sample description nTPM
Caudate
nTPM: 73.0
Samples: 4

Max nTPM: 88.2
Min nTPM: 66.9
Sample A Female 66.9
Sample B Female 68.2
Sample C Male 88.2
Sample D Male 68.6
Putamen
nTPM: 115.7
Samples: 4

Max nTPM: 152.1
Min nTPM: 78.5
Sample A Female 152.1
Sample B Female 78.5
Sample C Male 128.8
Sample D Male 103.4
Septum
nTPM: 83.7
Samples: 4

Max nTPM: 103.5
Min nTPM: 64.4
Sample A Female 81.9
Sample B Female 64.4
Sample C Male 103.5
Sample D Male 85.1
Ventral pallidum
nTPM: 88.1
Samples: 4

Max nTPM: 115.2
Min nTPM: 73.1
Sample A Female 73.1
Sample B Female 74.8
Sample C Male 115.2
Sample D Male 89.3

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The Human Protein Atlas project is funded
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