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BRAIN CEREBELLUM Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS MEDULLA OBLONGATA
MIDBRAIN OLFACTORY BULB PITUITARY GLAND PONS RETINA SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
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VALIDATION
Brain proteome
Cerebellum
CEREBELLUM - Expression summary
Protein expression
Cerebellumi

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Cells in granular layer: Not detected
Cells in molecular layer: Not detected
Purkinje cells: Low
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:111.1 nTPM
HPA Brain:540.3 nTPM
GTEx:111.1 nTPM
FANTOM5:396.7 Scaled Tags Per Million
Pig:51.8 nTPM

CEREBELLUM - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA042380
Purkinje cells Low
Cells in granular layer Not detected
Cells in molecular layer Not detected



CEREBELLUM - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

540.3
Sample id Sample description nTPM
Cerebellar cortex
nTPM: 343.7
2003 Female, age 85, right hemisphere 429.0
1768 Female, age 72, unknown 376.0
2006 Male, age 61, right hemisphere 374.6
2101 Male, age 74, right hemisphere 362.2
1769 Male, age 76, right hemisphere 329.7
2055 Female, age 91, right hemisphere 313.2
1774 Male, age 80, left hemisphere 290.3
1788 Male, age 55, unknown 274.9
Cerebellar nuclei
nTPM: 540.3
2783 Female, age 72, unknown 677.1
2177 Female, age 85, both hemispheres 652.2
1966 Female, age 91, left hemisphere 577.7
2005 Male, age 80, left hemisphere 572.7
2882 Male, age 76, left hemisphere 530.0
1871 Male, age 74, unknown 510.0
1879 Male, age 55, unknown 478.0
2175 Male, age 61, right hemisphere 473.6
2318 Male, age 74, left hemisphere 391.1
Flocculonodular lobe
nTPM: 292.6
1765 Male, age 55, unknown 349.4
1792 Male, age 74, unknown 311.8
2176 Female, age 91, right hemisphere 309.0
1767 Male, age 76, left hemisphere 294.7
1835 Female, age 85, right hemisphere 285.7
1771 Male, age 80, left hemisphere 259.2
2004 Male, age 61, right hemisphere 238.2
Vermis
nTPM: 281.5
1751 Male, age 74, right hemisphere 397.3
1778 Female, age 91, left hemisphere 334.3
1770 Male, age 76, left hemisphere 309.1
1928 Female, age 72, unknown 300.5
2834 Male, age 80, left hemisphere 286.0
1766 Male, age 55, unknown 260.9
1825 Male, age 74, unknown 238.0
1988 Female, age 85, left hemisphere 226.6
2460 Male, age 61, both hemispheres 180.6

CEREBELLUM - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

111.1
GTEx sample id Sample description nTPM
Brain - Cerebellar Hemisphere
Average nTPM: 111.1
Samples: 215

Max nTPM: 241.3
Min nTPM: 54.0
Std nTPM: 35.3
Median nTPM: 103.7
GTEX-1LKK1-0011-R11a-SM-EXOIG 50-59 years, female 241.3
GTEX-1JJ6O-0011-R11b-SM-EXUS2 60-69 years, male 228.8
GTEX-1GMR8-0011-R11b-SM-9OSX2 50-59 years, female 207.7
GTEX-14C39-0011-R11b-SM-5YYAF 40-49 years, male 201.1
GTEX-N7MT-0011-R11A-SM-2I3DZ 60-69 years, female 194.2
GTEX-1IL2U-0011-R11a-SM-CE6SO 60-69 years, male 193.3
GTEX-13N2G-0011-R11a-SM-5MR3F 60-69 years, male 192.0
GTEX-139UW-0011-R11a-SM-5IJGN 60-69 years, male 190.0
GTEX-1GN73-0011-R11b-SM-9OSX4 60-69 years, male 182.9
GTEX-1CAV2-0011-R11a-SM-ARU8D 40-49 years, female 181.5
GTEX-14E7W-0011-R11a-SM-5ZZVA 70-79 years, male 173.3
GTEX-13JUV-0011-R11a-SM-5LZYH 40-49 years, female 172.5
GTEX-12126-0011-R11a-SM-5BC6X 20-29 years, male 171.7
GTEX-16XZZ-0011-R11a-SM-7EPI3 60-69 years, male 170.8
GTEX-16Z82-0011-R11a-SM-79OKJ 60-69 years, male 170.3
GTEX-1R9PO-0011-R11b-SM-EZ6NB 60-69 years, female 169.6
GTEX-14C5O-0011-R11b-SM-6872H 60-69 years, male 169.3
GTEX-13X6K-0011-R11a-SM-5P9F5 60-69 years, female 168.4
GTEX-1HSKV-0011-R11b-SM-AHZ2E 60-69 years, male 167.5
GTEX-13PLJ-0011-R11b-SM-5O9BS 60-69 years, female 165.1
GTEX-WWYW-0011-R11A-SM-3NB38 50-59 years, female 161.4
GTEX-14DAQ-0011-R11a-SM-664NO 60-69 years, female 159.6
GTEX-13OW5-0011-R11b-SM-5L3GG 60-69 years, male 159.5
GTEX-YFC4-0011-R11a-SM-4SOK6 40-49 years, female 156.6
GTEX-1HUB1-0011-R11b-SM-CE6SC 60-69 years, male 156.4
GTEX-1I1GQ-0011-R11b-SM-CKZPA 50-59 years, male 156.2
GTEX-1JJEA-0011-R11a-SM-EXUTE 60-69 years, male 156.0
GTEX-15EO6-0011-R11b-SM-6M47M 50-59 years, male 155.5
GTEX-13NYS-0011-R11b-SM-5MR4P 60-69 years, male 155.3
GTEX-11ZTS-0011-R11a-SM-DO113 60-69 years, female 153.8
GTEX-1A3MX-0011-R11b-SM-7DUGP 60-69 years, male 153.6
GTEX-1HGF4-0011-R11a-SM-C1YRR 60-69 years, male 153.6
GTEX-18A6Q-0011-R11a-SM-72D6H 60-69 years, male 152.6
GTEX-1R9K4-0011-R11a-SM-EZ6N9 60-69 years, male 150.3
GTEX-QDT8-0011-R11A-SM-32PKD 30-39 years, female 149.4
GTEX-1CB4G-0011-R11a-SM-9OSWG 60-69 years, male 148.8
GTEX-14BIN-0011-R11a-SM-5SI79 50-59 years, female 148.4
GTEX-1J1OQ-0011-R11a-SM-A96S3 40-49 years, female 147.0
GTEX-QMR6-0011-R11A-SM-32PKK 50-59 years, male 146.2
GTEX-1HBPI-0011-R11b-SM-CE6SH 50-59 years, male 145.4
GTEX-144GL-0011-R11b-SM-5P9F6 50-59 years, male 144.3
GTEX-16YQH-0011-R11b-SM-7LT98 30-39 years, male 143.4
GTEX-17EVP-0011-R11a-SM-7EWDL 40-49 years, male 140.3
GTEX-1H3VE-0011-R11b-SM-C1YRP 40-49 years, male 138.6
GTEX-13OVJ-0011-R11a-SM-5P9H8 50-59 years, female 137.1
GTEX-1IY9M-0011-R11b-SM-A96TI 60-69 years, male 137.1
GTEX-15ER7-0011-R11a-SM-6LPIL 20-29 years, female 136.7
GTEX-1EKGG-0011-R11a-SM-9QEHZ 60-69 years, male 136.6
GTEX-13FXS-0011-R11a-SM-5L3DM 50-59 years, male 134.8
GTEX-WZTO-0011-R11A-SM-4E3K9 40-49 years, male 133.5
GTEX-1F52S-0011-R11a-SM-CJI23 60-69 years, female 133.5
GTEX-Q2AG-0011-R11A-SM-2HMKZ 40-49 years, female 132.8
GTEX-1N2EE-0011-R11b-SM-EXOIJ 60-69 years, male 132.4
GTEX-14ASI-0011-R11b-SM-6AJBJ 60-69 years, male 132.3
GTEX-1GTWX-0011-R11b-SM-C1YQJ 60-69 years, male 132.1
GTEX-12WSM-0011-R11a-SM-5DUX8 60-69 years, male 131.2
GTEX-13SLW-0011-R11a-SM-5SI8Q 70-79 years, male 130.7
GTEX-WHSE-0011-R11A-SM-3P5YY 20-29 years, male 130.2
GTEX-12ZZX-0011-R11a-SM-5DUVJ 40-49 years, female 128.6
GTEX-15CHQ-0011-R11b-SM-686ZZ 60-69 years, male 127.9
GTEX-1AX9I-0011-R11b-SM-7DHN4 60-69 years, male 124.9
GTEX-1LG7Y-0011-R11a-SM-EXOIH 50-59 years, male 124.4
GTEX-1EMGI-0011-R11b-SM-9OSWX 60-69 years, male 123.4
GTEX-1IKK5-0011-R11a-SM-C1YRX 60-69 years, male 123.0
GTEX-1GZ4I-0011-R11b-SM-9OSWR 50-59 years, male 122.6
GTEX-131XH-0011-R11a-SM-5EGLN 50-59 years, male 121.7
GTEX-15DYW-0011-R11a-SM-6LPIT 60-69 years, female 121.5
GTEX-ZUA1-0011-R11b-SM-51MTI 40-49 years, male 120.9
GTEX-T6MN-0011-R11A-SM-32QOX 50-59 years, male 120.0
GTEX-13FLV-0011-R11a-SM-5LZZ7 50-59 years, male 119.9
GTEX-X261-0011-R11A-SM-4E3JY 50-59 years, male 119.9
GTEX-13OVH-0011-R11b-SM-5KM4X 70-79 years, male 119.8
GTEX-1HB9E-0011-R11b-SM-ARU79 50-59 years, male 119.6
GTEX-X4XX-0011-R11A-SM-46MWQ 60-69 years, male 119.4
GTEX-Y8DK-0011-R11A-SM-4SOK2 60-69 years, male 117.6
GTEX-1I1GV-0011-R11a-SM-CJI3Z 60-69 years, male 116.8
GTEX-NPJ7-0011-R11A-SM-2I3E8 60-69 years, female 116.6
GTEX-1KD4Q-0011-R11b-SM-EXOIE 40-49 years, male 116.5
GTEX-13G51-0011-R11b-SM-5J2NE 60-69 years, male 116.4
GTEX-1GF9W-0011-R11b-SM-9OSXG 60-69 years, male 115.9
GTEX-131XW-0011-R11a-SM-5DUV9 50-59 years, female 115.5
GTEX-1IDJH-0011-R11b-SM-C1YRT 70-79 years, male 115.4
GTEX-1IL2V-0011-R11a-SM-ARU6T 70-79 years, male 115.4
GTEX-14ABY-0011-R11a-SM-5SI7C 50-59 years, male 113.7
GTEX-16GPK-0011-R11b-SM-7MKFF 60-69 years, male 113.7
GTEX-12WSH-0011-R11a-SM-5LZVM 50-59 years, male 113.6
GTEX-11DXY-0011-R11a-SM-DNZZN 60-69 years, male 113.6
GTEX-P44G-0011-R11A-SM-2I3FD 30-39 years, male 113.4
GTEX-13O3O-0011-R11b-SM-5KM4G 60-69 years, female 113.3
GTEX-17HG3-0011-R11b-SM-7KFT4 30-39 years, female 113.0
GTEX-18465-0011-R11a-SM-72D78 50-59 years, male 112.9
GTEX-11GSP-0011-R11b-SM-5NQ7V 60-69 years, female 112.7
GTEX-11H98-0011-R11b-SM-5NQ6U 50-59 years, male 112.4
GTEX-X585-0011-R11B-SM-46MUZ 50-59 years, male 112.4
GTEX-1B8SG-0011-R11a-SM-7P8PF 50-59 years, male 112.4
GTEX-1F6I4-0011-R11b-SM-9OSWS 60-69 years, male 110.8
GTEX-S7SE-0011-R11A-SM-2XCDD 50-59 years, male 110.7
GTEX-1J8EW-0011-R11a-SM-AHZ37 60-69 years, female 109.4
GTEX-TSE9-0011-R11A-SM-3DB7N 60-69 years, female 109.2
GTEX-ZE7O-0011-R11a-SM-57WBC 50-59 years, female 109.2
GTEX-ZVZQ-0011-R11a-SM-51MS6 60-69 years, female 109.2
GTEX-1LVAO-0011-R11b-SM-EXOI8 60-69 years, male 109.1
GTEX-1I1GS-0011-R11a-SM-C1YRU 60-69 years, male 107.6
GTEX-145LU-0011-R11b-SM-5P9JX 50-59 years, male 107.2
GTEX-15DCD-0011-R11a-SM-D4P1R 70-79 years, female 106.7
GTEX-13FHO-0011-R11b-SM-5LZYQ 60-69 years, male 106.6
GTEX-11DZ1-0011-R11b-SM-DO11W 50-59 years, male 104.7
GTEX-NL4W-0011-R11A-SM-2I3DW 50-59 years, male 103.7
GTEX-RU72-0011-R11A-SM-CM2U1 50-59 years, female 103.3
GTEX-11PRG-0011-R11b-SM-DNZZY 50-59 years, male 103.1
GTEX-13X6I-0011-R11a-SM-5P9HN 60-69 years, male 102.9
GTEX-1C64N-0011-R11b-SM-7P8Q6 50-59 years, male 102.5
GTEX-1F48J-0011-R11b-SM-9OSWV 50-59 years, female 101.6
GTEX-13X6J-0011-R11a-SM-5P9HE 50-59 years, male 101.4
GTEX-ZAB4-0011-R11a-SM-4SOKI 40-49 years, male 101.3
GTEX-1B933-0011-R11a-SM-7P8PM 50-59 years, female 101.3
GTEX-NL3H-0011-R11A-SM-2I3E6 60-69 years, male 100.5
GTEX-1I1GR-0011-R11a-SM-CM2T5 60-69 years, male 100.4
GTEX-131YS-0011-R11b-SM-5EGLM 60-69 years, female 100.1
GTEX-139TT-0011-R11b-SM-5LZV1 60-69 years, male 99.0
GTEX-1LSVX-0011-R11b-SM-EXOIA 60-69 years, male 98.7
GTEX-14BIM-0011-R11b-SM-5S2RN 60-69 years, female 98.4
GTEX-1J8Q2-0011-R11a-SM-A9SKI 60-69 years, male 97.8
GTEX-14PN4-0011-R11a-SM-686ZW 50-59 years, male 97.2
GTEX-17F97-0011-R11b-SM-7KFRQ 50-59 years, male 97.0
GTEX-11WQC-0011-R11b-SM-57WD6 60-69 years, male 96.1
GTEX-12WSC-0011-R11a-SM-5GU5J 50-59 years, male 95.5
GTEX-1313W-0011-R11a-SM-5DUXN 50-59 years, female 95.5
GTEX-17HII-0011-R11b-SM-7KFSX 50-59 years, male 95.2
GTEX-1JMOU-0011-R11b-SM-EXUTA 60-69 years, female 95.1
GTEX-13CF2-0011-R11b-SM-5LZXO 60-69 years, male 94.6
GTEX-14E6D-0011-R11b-SM-664NP 50-59 years, male 94.5
GTEX-1IGQW-0011-R11a-SM-C1YRV 60-69 years, male 94.4
GTEX-P44H-0011-R11A-SM-2XCER 40-49 years, male 94.1
GTEX-1E1VI-0011-R11a-SM-9OSWI 50-59 years, male 94.1
GTEX-12WSF-0011-R11a-SM-5LZVT 70-79 years, male 93.7
GTEX-UTHO-0011-R11A-SM-3GIJE 60-69 years, male 93.4
GTEX-1H1DG-0011-R11a-SM-C1YQK 70-79 years, male 92.8
GTEX-11TTK-0011-R11b-SM-DO112 60-69 years, female 92.7
GTEX-13OW6-0011-R11a-SM-5L3H2 50-59 years, male 92.3
GTEX-NPJ8-0011-R11A-SM-2YUMS 40-49 years, male 92.2
GTEX-12ZZZ-0011-R11a-SM-5EGLC 60-69 years, male 92.0
GTEX-13CZV-0011-R11b-SM-5N9FN 60-69 years, male 91.9
GTEX-12WSD-0011-R11a-SM-9OSVC 60-69 years, female 91.7
GTEX-13VXU-0011-R11b-SM-5O9DJ 50-59 years, male 91.4
GTEX-1H3NZ-0011-R11b-SM-CE6SF 60-69 years, male 91.3
GTEX-1HFI6-0011-R11b-SM-A96RU 40-49 years, male 90.1
GTEX-1F75W-0011-R11b-SM-AHZ34 60-69 years, male 90.0
GTEX-11ZUS-0011-R11b-SM-5BC7B 30-39 years, male 89.7
GTEX-15G19-0011-R11b-SM-6LPIH 60-69 years, male 89.6
GTEX-X4EP-0011-R11B-SM-4QASK 60-69 years, female 89.4
GTEX-13FTY-0011-R11a-SM-5IJEA 40-49 years, female 88.5
GTEX-13JVG-0011-R11a-SM-5KM53 60-69 years, male 88.5
GTEX-T5JC-0011-R11A-SM-32PMB 20-29 years, male 88.5
GTEX-WL46-0011-R11A-SM-3MJFT 50-59 years, male 87.1
GTEX-13OW7-0011-R11a-SM-5O9DY 50-59 years, male 87.0
GTEX-12WSI-0011-R11b-SM-5P9EZ 50-59 years, male 85.8
GTEX-1H1ZS-0011-R11a-SM-C1YQM 70-79 years, male 85.8
GTEX-13SLX-0011-R11b-SM-5O9C8 50-59 years, female 84.7
GTEX-1F75A-0011-R11a-SM-AHZ35 50-59 years, male 84.5
GTEX-YJ89-0011-R11a-SM-4SOKA 60-69 years, male 84.3
GTEX-1399T-0011-R11a-SM-5J2O1 60-69 years, male 83.4
GTEX-13RTJ-0011-R11a-SM-5O9CK 60-69 years, male 83.2
GTEX-13OVL-0011-R11b-SM-5L3G7 50-59 years, male 82.2
GTEX-13OW8-0011-R11a-SM-5L3GT 60-69 years, male 82.1
GTEX-1H1CY-0011-R11a-SM-C1YQR 60-69 years, female 82.0
GTEX-1N2DW-0011-R11b-SM-EXOIL 50-59 years, male 81.5
GTEX-1IKOH-0011-R11a-SM-AHZ38 60-69 years, female 81.4
GTEX-1B8L1-0011-R11b-SM-793DJ 60-69 years, male 81.1
GTEX-WVLH-0011-R11A-SM-3MJFO 50-59 years, male 81.1
GTEX-13NZA-0011-R11b-SM-5KM4W 60-69 years, male 80.6
GTEX-13S7M-0011-R11b-SM-5P9HU 60-69 years, female 80.3
GTEX-1I19N-0011-R11b-SM-ARU6Y 70-79 years, male 80.2
GTEX-ZF28-0011-R11a-SM-4WWEI 60-69 years, male 79.8
GTEX-1IOXB-0011-R11a-SM-A9G1X 50-59 years, male 79.7
GTEX-11DYG-0011-R11a-SM-DNZZP 60-69 years, male 79.4
GTEX-13NYB-0011-R11a-SM-5KM3Q 40-49 years, male 79.1
GTEX-145MH-0011-R11a-SM-5P9HQ 50-59 years, male 78.0
GTEX-145MI-0011-R11a-SM-5P9JZ 60-69 years, female 77.3
GTEX-1F7RK-0011-R11b-SM-9QEI2 20-29 years, female 77.2
GTEX-Z93S-0011-R11a-SM-4RGNN 50-59 years, male 76.1
GTEX-11EI6-0011-R11a-SM-DO11V 60-69 years, male 76.1
GTEX-13FHP-0011-R11b-SM-5LZXP 50-59 years, male 75.9
GTEX-1BAJH-0011-R11b-SM-7IGLM 70-79 years, male 75.8
GTEX-16NPV-0011-R11a-SM-7IGMK 50-59 years, female 75.8
GTEX-13PVQ-0011-R11a-SM-5O9DU 50-59 years, male 75.7
GTEX-T2IS-0011-R11A-SM-32QPC 20-29 years, female 75.2
GTEX-1JMQJ-0011-R11a-SM-EXOJY 50-59 years, male 74.9
GTEX-11OF3-0011-R11a-SM-57WCR 60-69 years, male 74.8
GTEX-1M4P7-0011-R11b-SM-EXOIK 60-69 years, male 73.6
GTEX-1GMRU-0011-R11b-SM-C1YQ4 50-59 years, male 73.5
GTEX-1I1HK-0011-R11a-SM-B2LVN 60-69 years, male 72.4
GTEX-ZDXO-0011-R11a-SM-4WWD9 60-69 years, male 70.8
GTEX-183WM-0011-R11a-SM-718A5 70-79 years, female 69.8
GTEX-ZE9C-0011-R11a-SM-4WKGG 60-69 years, male 69.6
GTEX-132Q8-0011-R11b-SM-5DUW9 60-69 years, male 69.0
GTEX-17JCI-0011-R11a-SM-7189Y 60-69 years, female 69.0
GTEX-RVPV-0011-R11A-SM-2TF6F 60-69 years, male 69.0
GTEX-1B8SF-0011-R11a-SM-79OOP 60-69 years, male 68.2
GTEX-13O3Q-0011-R11b-SM-5KM2W 50-59 years, male 67.6
GTEX-11EMC-0011-R11b-SM-DNZZK 60-69 years, female 66.8
GTEX-1H3O1-0011-R11a-SM-A96RV 60-69 years, male 66.8
GTEX-12WSE-0011-R11b-SM-5P9JW 20-29 years, male 66.3
GTEX-N7MS-0011-R11A-SM-2HMJS 60-69 years, male 66.2
GTEX-13QIC-0011-R11b-SM-5O9BU 60-69 years, female 66.1
GTEX-R55E-0011-R11A-SM-2TC6I 20-29 years, male 65.3
GTEX-ZVT3-0011-R11b-SM-57WBI 60-69 years, female 63.6
GTEX-1ICLZ-0011-R11a-SM-CJI3N 60-69 years, male 63.5
GTEX-OHPN-0011-R11A-SM-2I5FM 60-69 years, female 63.0
GTEX-17EVQ-0011-R11a-SM-7LT9C 70-79 years, male 62.5
GTEX-1HCU6-0011-R11b-SM-AHZ2F 60-69 years, female 60.1
GTEX-1H4P4-0011-R11b-SM-CE6S8 50-59 years, male 59.1
GTEX-XMD1-0011-R11A-SM-4AT5J 60-69 years, male 57.7
GTEX-1GZHY-0011-R11a-SM-C1YRQ 50-59 years, female 56.5
GTEX-18464-0011-R11a-SM-72D76 50-59 years, male 54.0
Show allShow less
Brain - Cerebellum
Average nTPM: 108.4
Samples: 241

Max nTPM: 231.6
Min nTPM: 47.3
Std nTPM: 31.5
Median nTPM: 104.6
GTEX-1H3VE-2826-SM-9WPOL 40-49 years, male 231.6
GTEX-14A5I-2826-SM-5SIBF 50-59 years, female 231.4
GTEX-16XZZ-2926-SM-6LPK4 60-69 years, male 211.1
GTEX-1EH9U-3126-SM-7MXU5 60-69 years, male 207.3
GTEX-RU72-2926-SM-2TF66 50-59 years, female 201.3
GTEX-14PJO-2926-SM-686ZI 60-69 years, male 197.0
GTEX-1269C-3126-SM-5EGI6 60-69 years, female 195.5
GTEX-ZF28-2926-SM-4WKG1 60-69 years, male 179.7
GTEX-1JJE9-3026-SM-CNNPA 70-79 years, male 171.5
GTEX-1R46S-3126-SM-DPRZ9 60-69 years, female 167.3
GTEX-144GL-2926-SM-5O99F 50-59 years, male 165.8
GTEX-1JN1M-3126-SM-AHZ4E 60-69 years, female 161.0
GTEX-1JJ6O-3026-SM-C1YQH 60-69 years, male 156.7
GTEX-11EMC-3326-SM-5P9JH 60-69 years, female 156.3
GTEX-14C5O-2926-SM-5RQI1 60-69 years, male 154.9
GTEX-15DYW-3026-SM-7KFRM 60-69 years, female 154.6
GTEX-NPJ7-2826-SM-2I3FU 60-69 years, female 152.8
GTEX-14DAQ-3026-SM-5S2QZ 60-69 years, female 152.5
GTEX-RNOR-2226-SM-2TF5O 50-59 years, female 152.4
GTEX-11GSP-3126-SM-5A5LL 60-69 years, female 149.8
GTEX-1PWST-3026-SM-EAZ3H 70-79 years, male 148.9
GTEX-WHSE-2926-SM-3NMBG 20-29 years, male 147.9
GTEX-QMR6-1326-SM-32PLB 50-59 years, male 147.7
GTEX-11ONC-3026-SM-5985W 60-69 years, male 147.0
GTEX-13OVJ-2726-SM-5IJG6 50-59 years, female 146.3
GTEX-13OW5-3126-SM-5MR3Y 60-69 years, male 145.7
GTEX-Y8DK-0726-SM-4TT3S 60-69 years, male 143.9
GTEX-13N2G-3126-SM-5IJGL 60-69 years, male 143.0
GTEX-WWYW-3026-SM-3NB36 50-59 years, female 142.3
GTEX-13X6K-2826-SM-5O9DS 60-69 years, female 141.6
GTEX-11OC5-0626-SM-5HL6M 60-69 years, male 140.9
GTEX-12126-0926-SM-5FQTW 20-29 years, male 140.9
GTEX-14JG1-2926-SM-686ZK 40-49 years, male 140.9
GTEX-13OVL-3026-SM-5IJF1 50-59 years, male 138.6
GTEX-15ER7-3026-SM-6M47W 20-29 years, female 138.3
GTEX-ZZPT-2926-SM-5EQ5S 50-59 years, male 137.7
GTEX-1HB9E-3126-SM-AHZ4M 50-59 years, male 137.6
GTEX-1F6IF-3026-SM-7P8QN 60-69 years, male 136.3
GTEX-ZAB4-2926-SM-57WCV 40-49 years, male 136.1
GTEX-12WSD-3026-SM-5LZU7 60-69 years, female 135.9
GTEX-13OVH-2926-SM-5IJFH 70-79 years, male 135.6
GTEX-1GN73-3026-SM-7MXV8 60-69 years, male 135.5
GTEX-11TTK-2826-SM-5GU5K 60-69 years, female 134.8
GTEX-1PIIG-2826-SM-DTX7O 30-39 years, male 134.7
GTEX-13X6I-2926-SM-5Q5C3 60-69 years, male 134.2
GTEX-PVOW-2626-SM-32PL8 40-49 years, male 134.1
GTEX-1RDX4-3226-SM-DPS14 50-59 years, female 133.7
GTEX-14C39-3026-SM-5S2QE 40-49 years, male 132.5
GTEX-17HII-2926-SM-79OMK 50-59 years, male 132.4
GTEX-1F6I4-3026-SM-7P8SI 60-69 years, male 131.4
GTEX-145MF-2826-SM-7EPGU 50-59 years, male 130.8
GTEX-139TS-3126-SM-5LZWX 60-69 years, male 130.3
GTEX-1A8G7-3026-SM-73KTT 60-69 years, male 130.2
GTEX-1GF9V-3026-SM-7P8R8 60-69 years, male 129.3
GTEX-PWO3-1026-SM-2I5F2 60-69 years, female 128.3
GTEX-11DXW-1026-SM-5H11K 40-49 years, male 127.0
GTEX-S7SE-2526-SM-2XCDL 50-59 years, male 127.0
GTEX-N7MT-1226-SM-DKPOK 60-69 years, female 126.5
GTEX-18A6Q-2826-SM-7LTAO 60-69 years, male 125.1
GTEX-1H3NZ-2926-SM-9WPQ8 60-69 years, male 125.1
GTEX-1KD4Q-3026-SM-EV7A7 40-49 years, male 124.6
GTEX-P44H-2426-SM-2XCEJ 40-49 years, male 123.7
GTEX-1A3MX-2926-SM-718B7 60-69 years, male 123.6
GTEX-13FHO-2926-SM-5L3ES 60-69 years, male 123.5
GTEX-111FC-3326-SM-5GZYV 60-69 years, male 123.2
GTEX-1GZ2Q-3026-SM-9JGG3 40-49 years, male 123.2
GTEX-ZYY3-3026-SM-5GIEJ 60-69 years, female 122.1
GTEX-1B996-2926-SM-7MXUH 60-69 years, male 122.1
GTEX-1I1GV-3026-SM-CNNR9 60-69 years, male 122.1
GTEX-14PJM-3026-SM-6LLHM 50-59 years, female 121.9
GTEX-17HG3-2826-SM-7EPGO 30-39 years, female 121.8
GTEX-11ZVC-3026-SM-59HJM 50-59 years, female 121.0
GTEX-12WSM-2126-SM-5GCOC 60-69 years, male 119.7
GTEX-139TT-2626-SM-5LZUB 60-69 years, male 119.7
GTEX-1EU9M-2926-SM-793DF 60-69 years, male 119.7
GTEX-13JUV-3026-SM-5K7WX 40-49 years, female 119.5
GTEX-117XS-3126-SM-5GIDP 60-69 years, male 119.2
GTEX-11DZ1-2926-SM-5A5KI 50-59 years, male 119.2
GTEX-14BMV-2926-SM-5TDEE 50-59 years, male 119.2
GTEX-13O3O-3026-SM-5KM42 60-69 years, female 118.8
GTEX-1HBPH-3026-SM-9WPNY 40-49 years, female 118.6
GTEX-13FXS-3026-SM-5LZYO 50-59 years, male 117.6
GTEX-1CB4G-2926-SM-7MKFQ 60-69 years, male 117.5
GTEX-1QP6S-3026-SM-EAZ4N 40-49 years, male 117.4
GTEX-1GZ4I-2926-SM-9JGGO 50-59 years, male 116.6
GTEX-1J1OQ-3126-SM-D4P2O 40-49 years, female 116.5
GTEX-147GR-3126-SM-5S2PM 60-69 years, male 116.0
GTEX-XLM4-2926-SM-4AT59 60-69 years, male 115.8
GTEX-1HCVE-2926-SM-9WPPJ 50-59 years, male 115.5
GTEX-18465-2926-SM-7KFSE 50-59 years, male 115.4
GTEX-1QEPI-3026-SM-EXOIW 60-69 years, female 115.2
GTEX-P44G-2526-SM-2I5EK 30-39 years, male 114.7
GTEX-YJ89-2926-SM-5P9IT 60-69 years, male 114.0
GTEX-17HHY-2926-SM-79OJW 50-59 years, male 113.4
GTEX-QVUS-2926-SM-3GIJB 60-69 years, female 112.5
GTEX-145LS-3026-SM-5O99S 60-69 years, female 112.4
GTEX-WZTO-2826-SM-3NM8P 40-49 years, male 111.8
GTEX-1EWIQ-3026-SM-7IGOJ 70-79 years, female 111.7
GTEX-14ASI-2926-SM-5Q5DG 60-69 years, male 111.5
GTEX-ZAJG-3026-SM-5HL92 50-59 years, female 111.0
GTEX-1E2YA-2926-SM-7MGWX 50-59 years, male 110.6
GTEX-1H1DG-2826-SM-9JGHB 70-79 years, male 109.8
GTEX-13112-2926-SM-5DUWT 50-59 years, male 109.6
GTEX-1KWVE-2226-SM-CXZKN 30-39 years, male 109.5
GTEX-1CB4H-3026-SM-79OLX 60-69 years, female 109.4
GTEX-1F48J-2726-SM-7P8PW 50-59 years, female 109.4
GTEX-1JMPZ-2826-SM-C1YRA 30-39 years, male 109.3
GTEX-12ZZX-2826-SM-5BC6K 40-49 years, female 109.0
GTEX-1HSMO-2926-SM-C1YR5 60-69 years, male 109.0
GTEX-X261-3126-SM-4PQZC 50-59 years, male 108.9
GTEX-1GTWX-2926-SM-7MXV4 60-69 years, male 108.6
GTEX-15G19-2826-SM-6M48K 60-69 years, male 108.4
GTEX-1JJEA-2926-SM-C1YSK 60-69 years, male 108.2
GTEX-1EMGI-3126-SM-7MXUR 60-69 years, male 107.7
GTEX-UTHO-2926-SM-3P5Z9 60-69 years, male 107.1
GTEX-1128S-2826-SM-5N9DI 60-69 years, female 106.4
GTEX-YFC4-3026-SM-5IFJK 40-49 years, female 106.1
GTEX-X4XX-2926-SM-3NMB1 60-69 years, male 106.0
GTEX-15SHU-3026-SM-6LPIB 40-49 years, female 105.0
GTEX-1192X-3226-SM-5987D 50-59 years, male 104.9
GTEX-TSE9-2926-SM-3DB77 60-69 years, female 104.6
GTEX-1IL2V-3026-SM-CYPSA 70-79 years, male 104.4
GTEX-13CF2-3026-SM-5IFFX 60-69 years, male 104.2
GTEX-14E7W-2926-SM-5S2R8 70-79 years, male 103.7
GTEX-13QIC-3026-SM-5LU58 60-69 years, female 103.6
GTEX-ZYFD-2926-SM-5GID9 50-59 years, male 103.6
GTEX-11PRG-2826-SM-5BC54 50-59 years, male 103.4
GTEX-1HSKV-2926-SM-B2LWJ 60-69 years, male 103.1
GTEX-1GF9W-2726-SM-9JGGW 60-69 years, male 101.7
GTEX-131YS-3026-SM-5EGHY 60-69 years, female 101.6
GTEX-14JFF-2826-SM-6871Q 60-69 years, male 101.3
GTEX-1C64N-3126-SM-79OO3 50-59 years, male 101.3
GTEX-XMD1-2826-SM-4AT5F 60-69 years, male 101.2
GTEX-12WSH-3126-SM-5LZW8 50-59 years, male 101.1
GTEX-T6MN-2526-SM-32PMN 50-59 years, male 101.1
GTEX-12ZZY-2926-SM-5DUXO 60-69 years, male 101.0
GTEX-17EVP-2926-SM-793BU 40-49 years, male 100.9
GTEX-1JMOU-2826-SM-EV79R 60-69 years, female 100.9
GTEX-11DXY-3126-SM-5N9BT 60-69 years, male 100.8
GTEX-QVJO-1325-SM-2S1QX 60-69 years, female 100.7
GTEX-13JVG-3226-SM-5IJGJ 60-69 years, male 100.2
GTEX-1B933-3026-SM-731DB 50-59 years, female 99.6
GTEX-17JCI-3026-SM-7EWDR 60-69 years, female 99.1
GTEX-11GSO-3026-SM-5Q5AL 60-69 years, male 98.5
GTEX-1A8G6-3126-SM-731D8 60-69 years, male 98.5
GTEX-1GZHY-3026-SM-7MXVA 50-59 years, female 98.1
GTEX-14JIY-2326-SM-6AJAJ 60-69 years, male 98.0
GTEX-11DYG-2926-SM-5H132 60-69 years, male 97.9
GTEX-QDT8-3026-SM-32PKB 30-39 years, female 97.9
GTEX-14BIM-3126-SM-5Q5C7 60-69 years, female 97.6
GTEX-1H3O1-1826-SM-A96TO 60-69 years, male 97.5
GTEX-1IDJH-3126-SM-C1YQS 70-79 years, male 97.5
GTEX-WVLH-2926-SM-3MJG5 50-59 years, male 97.2
GTEX-1F52S-3026-SM-7P8PV 60-69 years, female 95.7
GTEX-1399T-3126-SM-5IJFS 60-69 years, male 95.6
GTEX-1I1HK-2726-SM-AHZ2M 60-69 years, male 94.7
GTEX-1RQEC-3026-SM-DPRXM 60-69 years, male 94.4
GTEX-1POEN-2726-SM-E9U6B 30-39 years, female 94.0
GTEX-11ZTS-3226-SM-5EGID 60-69 years, female 93.9
GTEX-13G51-3126-SM-5IJG7 60-69 years, male 93.9
GTEX-16YQH-2926-SM-6LPJE 30-39 years, male 93.9
GTEX-11NUK-3026-SM-5986K 50-59 years, male 93.4
GTEX-17F97-2926-SM-7DUEQ 50-59 years, male 93.3
GTEX-1BAJH-3126-SM-7MGXY 70-79 years, male 92.9
GTEX-145MG-3126-SM-5Q5D3 50-59 years, male 92.2
GTEX-13X6J-2926-SM-7EPGP 50-59 years, male 91.8
GTEX-1H1CY-3026-SM-9OSW7 60-69 years, female 91.8
GTEX-14BIN-3326-SM-5Q5E6 50-59 years, female 91.4
GTEX-13O3Q-3026-SM-5IJGD 50-59 years, male 91.3
GTEX-1B8SF-3026-SM-731DX 60-69 years, male 91.1
GTEX-1IY9M-3126-SM-AHZ3A 60-69 years, male 90.6
GTEX-1HBPI-2726-SM-9WPPF 50-59 years, male 90.5
GTEX-1I1CD-2926-SM-A96SJ 60-69 years, female 90.2
GTEX-1JMLX-3026-SM-EV79Q 50-59 years, male 90.2
GTEX-15EO6-2926-SM-6M48D 50-59 years, male 89.9
GTEX-145LU-2626-SM-5LU9Z 50-59 years, male 89.1
GTEX-1B8L1-3226-SM-7P8OX 60-69 years, male 88.4
GTEX-13FHP-2926-SM-5IJG9 50-59 years, male 87.5
GTEX-OHPN-2626-SM-2I5H1 60-69 years, female 87.4
GTEX-1LSVX-2826-SM-EVR58 60-69 years, male 87.4
GTEX-11O72-2826-SM-5HL6W 40-49 years, male 87.3
GTEX-13OW6-2926-SM-5KM29 50-59 years, male 87.0
GTEX-1C6VR-3026-SM-7IGLW 60-69 years, male 86.8
GTEX-1R9PO-2826-SM-E6CPV 60-69 years, female 86.7
GTEX-13OW7-2926-SM-5MR3Z 50-59 years, male 86.4
GTEX-1NV8Z-3026-SM-DTX8Z 60-69 years, male 85.7
GTEX-132Q8-2926-SM-5IFFP 60-69 years, male 85.5
GTEX-1H1ZS-2926-SM-9WPP2 70-79 years, male 85.2
GTEX-147F4-3026-SM-5Q5BJ 50-59 years, male 85.0
GTEX-13RTJ-3126-SM-5S2Q4 60-69 years, male 84.9
GTEX-NPJ8-2626-SM-2D7W2 40-49 years, male 84.1
GTEX-ZVT3-2926-SM-5GU6M 60-69 years, female 84.1
GTEX-13VXU-3026-SM-5LU3K 50-59 years, male 83.6
GTEX-1KANB-3226-SM-D4P3G 50-59 years, male 82.2
GTEX-N7MS-2526-SM-2D7W3 60-69 years, male 81.4
GTEX-145MH-2926-SM-5Q5D2 50-59 years, male 79.2
GTEX-183WM-2726-SM-7KFRF 70-79 years, female 79.2
GTEX-Q2AG-2826-SM-2HMJQ 40-49 years, female 79.1
GTEX-11EI6-2926-SM-5985U 60-69 years, male 78.4
GTEX-13OW8-2926-SM-5L3FV 60-69 years, male 78.2
GTEX-1EKGG-3126-SM-9WPO5 60-69 years, male 78.0
GTEX-T5JC-2326-SM-32PMR 20-29 years, male 77.4
GTEX-X4EP-3026-SM-3P5YP 60-69 years, female 77.4
GTEX-14PN4-3026-SM-664O4 50-59 years, male 77.3
GTEX-17EVQ-2726-SM-7EWDT 70-79 years, male 77.2
GTEX-1RNSC-3126-SM-EVR4V 60-69 years, male 76.7
GTEX-14E6D-2926-SM-664OP 50-59 years, male 75.8
GTEX-1EX96-3126-SM-9JGGC 50-59 years, male 75.4
GTEX-1313W-3026-SM-5LZUZ 50-59 years, female 75.3
GTEX-ZDXO-2926-SM-4WKFM 60-69 years, male 75.3
GTEX-1P4AB-3026-SM-EXOJS 50-59 years, male 74.6
GTEX-11ZUS-2826-SM-5EQKW 30-39 years, male 74.3
GTEX-1LG7Y-3126-SM-EV7AS 50-59 years, male 74.2
GTEX-1IKOH-2826-SM-CNNRC 60-69 years, female 72.9
GTEX-14ABY-3026-SM-664NE 50-59 years, male 72.5
GTEX-131XH-2926-SM-5LZU4 50-59 years, male 72.4
GTEX-T2IS-2926-SM-32QPO 20-29 years, female 71.7
GTEX-1B8SG-1926-SM-73KUB 50-59 years, male 70.4
GTEX-ZAK1-2926-SM-5HL9S 50-59 years, female 70.4
GTEX-WL46-2826-SM-3LK81 50-59 years, male 70.2
GTEX-ZUA1-2926-SM-59HL3 40-49 years, male 70.2
GTEX-1E1VI-2926-SM-7IGLT 50-59 years, male 67.0
GTEX-Y111-2826-SM-4TT3O 50-59 years, male 66.6
GTEX-Z93S-2826-SM-57WBL 50-59 years, male 66.4
GTEX-1MJK2-3026-SM-EV7A5 50-59 years, male 66.3
GTEX-1C6WA-3326-SM-7MKGN 60-69 years, male 65.3
GTEX-1F75W-3126-SM-7P8SJ 60-69 years, male 64.8
GTEX-13SLX-3226-SM-5YYA6 50-59 years, female 63.6
GTEX-1H4P4-2726-SM-9JGGB 50-59 years, male 63.4
GTEX-11NV4-2226-SM-5BC4T 60-69 years, male 63.2
GTEX-1JMQJ-3126-SM-EV79G 50-59 years, male 62.6
GTEX-12WSE-2926-SM-5RQJ9 20-29 years, male 62.4
GTEX-13S7M-3026-SM-5S2QQ 60-69 years, female 62.2
GTEX-16Z82-2926-SM-6LPJJ 60-69 years, male 59.8
GTEX-1JMQK-2926-SM-D4P2T 60-69 years, male 59.5
GTEX-R55E-2526-SM-2TC6H 20-29 years, male 56.6
GTEX-1F75A-2926-SM-7MXVN 50-59 years, male 55.0
GTEX-13PVQ-2926-SM-5L3HJ 50-59 years, male 54.6
GTEX-12WSC-2926-SM-5BC5Z 50-59 years, male 53.2
GTEX-13NYB-3226-SM-5J2ND 40-49 years, male 52.7
GTEX-12ZZZ-3126-SM-5LZU6 60-69 years, male 47.3
Show allShow less

CEREBELLUM - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

396.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Cerebellum
Scaled Tags Per Million: 396.7
FF:10166-103B4 76 years, female 443.8
FF:10083-102B2 22-68 years, mixed 349.6

CEREBELLUM - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

51.8
Pig sample Sample description nTPM
Cerebellum
nTPM: 51.8
Samples: 4

Max nTPM: 85.7
Min nTPM: 36.1
Sample A Female 85.7
Sample B Female 46.1
Sample C Male 36.1
Sample D Male 39.4

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