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TISSUE PRIMARY DATA HYPOTHALAMUS Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM
ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MIDBRAIN NASOPHARYNX
ORAL MUCOSA OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE
SMOOTH MUSCLE SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
ANTIBODIES
AND
VALIDATION
Dictionary
Tissue proteome
Hypothalamus
HYPOTHALAMUS - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:201.2 nTPM
HPA Brain:488.8 nTPM
GTEx:201.2 nTPM
Pig:110.1 nTPM

HYPOTHALAMUS - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

488.8
Sample id Sample description nTPM
Arcuate nucleus
nTPM: 337.8
2226 Male, age 75, left hemisphere 376.6
1961 Female, age 42, unknown 299.0
Dorsomedial nucleus
nTPM: 356.9
2017 Female, age 42, unknown 381.9
1989 Male, age 62, unknown 381.0
2041 Female, age 72, unknown 307.9
Lateral hypothalamic area
nTPM: 344.6
1791 Male, age 80, right hemisphere 432.2
2271 Male, age 75, both hemispheres 328.7
2228 Male, age 66, unknown 321.0
2412 Male, age 62, unknown 296.7
Mammillary body
nTPM: 488.8
1923 Female, age 72, unknown 526.8
2413 Male, age 66, unknown 509.5
1834 Female, age 42, unknown 497.9
1948 Female, age 72, unknown 461.8
1945 Male, age 80, right hemisphere 448.1
Paraventricular nucleus
nTPM: 351.9
2700 Male, age 62, unknown 351.9
Preoptic area
nTPM: 405.8
1861 Female, age 42, unknown 437.6
1907 Male, age 80, right hemisphere 417.6
2414 Female, age 72, unknown 362.2
Supraoptic nucleus
nTPM: 368.5
2043 Male, age 62, unknown 393.2
1894 Female, age 72, unknown 392.8
2835 Female, age 72, unknown 319.4
Ventromedial nucleus
nTPM: 325.4
1982 Female, age 72, unknown 336.2
1822 Female, age 42, unknown 314.7

HYPOTHALAMUS - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

201.2
GTEx sample id Sample description nTPM
Brain - Hypothalamus
Average nTPM: 201.2
Samples: 202

Max nTPM: 410.2
Min nTPM: 50.1
Std nTPM: 56.8
Median nTPM: 194.7
GTEX-11H98-0011-R8a-SM-5NQ8V 50-59 years, male 410.2
GTEX-14LLW-0011-R8a-SM-62LFG 70-79 years, female 390.3
GTEX-15DCD-0011-R8b-SM-7KUEF 70-79 years, female 341.7
GTEX-1H3O1-0011-R8a-SM-CL555 60-69 years, male 337.1
GTEX-1B8SG-0011-R8b-SM-7IGNW 50-59 years, male 326.3
GTEX-11TTK-0011-R8b-SM-DO111 60-69 years, female 316.4
GTEX-QDT8-0011-R8A-SM-32PKE 30-39 years, female 316.2
GTEX-1GMR8-0011-R8a-SM-CKZNX 50-59 years, female 313.5
GTEX-144GL-0011-R8a-SM-5Q5B1 50-59 years, male 308.7
GTEX-Y8DK-0011-R8B-SM-EYYVQ 60-69 years, male 308.2
GTEX-XLM4-0011-R8A-SM-4AT44 60-69 years, male 300.0
GTEX-147F4-0011-R8b-SM-5S2UN 50-59 years, male 298.5
GTEX-13CIG-0011-R8b-SM-5LZX5 50-59 years, male 296.6
GTEX-1GN1U-0011-R8a-SM-CL537 50-59 years, female 293.6
GTEX-16XZZ-0011-R8b-SM-7LT8S 60-69 years, male 293.1
GTEX-1IY9M-0011-R8a-SM-EYYWW 60-69 years, male 291.2
GTEX-1445S-0011-R8a-SM-5PNWX 60-69 years, male 290.8
GTEX-13OVL-0011-R8a-SM-5L3HH 50-59 years, male 289.6
GTEX-13OVJ-0011-R8b-SM-5L3FS 50-59 years, female 285.6
GTEX-ZAB4-0011-R8b-SM-4SOKF 40-49 years, male 283.8
GTEX-P44H-0011-R8A-SM-2XCEL 40-49 years, male 283.2
GTEX-13SLX-0011-R8b-SM-5PNWZ 50-59 years, female 283.0
GTEX-1HBPH-0011-R8b-SM-CL556 40-49 years, female 277.7
GTEX-NPJ8-0011-R8a-SM-2HMLG 40-49 years, male 275.8
GTEX-1H1ZS-0011-R8b-SM-A9SKA 70-79 years, male 273.8
GTEX-11DYG-0011-R8a-SM-DO93F 60-69 years, male 272.9
GTEX-1F75A-0011-R8a-SM-CL539 50-59 years, male 269.5
GTEX-1HCU6-0011-R8a-SM-CJI3R 60-69 years, female 269.4
GTEX-RNOR-0011-R8A-SM-EZ6MN 50-59 years, female 267.8
GTEX-1HSKV-0011-R8a-SM-CL54X 60-69 years, male 267.0
GTEX-WWYW-0011-R8A-SM-3NB3S 50-59 years, female 266.6
GTEX-1GZ2Q-0011-R8a-SM-CE6RO 40-49 years, male 263.8
GTEX-13QJC-0011-R8b-SM-5S2U6 60-69 years, female 261.4
GTEX-Q2AG-0011-R8A-SM-2HMK5 40-49 years, female 260.7
GTEX-13X6J-0011-R8b-SM-5PNUA 50-59 years, male 259.7
GTEX-13FLW-0011-R8b-SM-5J1MZ 50-59 years, male 258.5
GTEX-1HBPI-0011-R8a-SM-A9G1S 50-59 years, male 256.2
GTEX-1I1GS-0011-R8b-SM-CKZPE 60-69 years, male 253.5
GTEX-13FLV-0011-R8a-SM-5LZZE 50-59 years, male 253.2
GTEX-1H3VE-0011-R8b-SM-A9G1L 40-49 years, male 252.4
GTEX-1GZ4I-0011-R8b-SM-9WG76 50-59 years, male 248.5
GTEX-11EMC-0011-R8b-SM-DO91Z 60-69 years, female 245.7
GTEX-1B8SF-0011-R8b-SM-7P8SX 60-69 years, male 244.9
GTEX-13SLW-0011-R8b-SM-5SI64 70-79 years, male 243.1
GTEX-139TS-0011-R8a-SM-5J1NP 60-69 years, male 237.6
GTEX-17EVP-0011-R8b-SM-7DUF9 40-49 years, male 236.5
GTEX-1I1HK-0011-R8b-SM-E8VN9 60-69 years, male 236.1
GTEX-13112-0011-R8b-SM-664OV 50-59 years, male 235.6
GTEX-12WSA-0011-R8a-SM-5P9EX 60-69 years, male 232.9
GTEX-N7MS-0011-R8a-SM-2YUMK 60-69 years, male 230.5
GTEX-1CB4G-0011-R8b-SM-9WG7H 60-69 years, male 229.0
GTEX-1IDJH-0011-R8b-SM-ARZLL 70-79 years, male 228.8
GTEX-131XH-0011-R8a-SM-5EGLL 50-59 years, male 228.7
GTEX-13NYS-0011-R8a-SM-5MR5H 60-69 years, male 227.6
GTEX-1J8Q2-0011-R8b-SM-D4P2E 60-69 years, male 226.5
GTEX-QMR6-0011-R8A-SM-32PKJ 50-59 years, male 225.7
GTEX-1H1CY-0011-R8b-SM-CJI31 60-69 years, female 225.2
GTEX-X261-0011-R8A-SM-4E3I5 50-59 years, male 224.2
GTEX-N7MT-0011-R8a-SM-2I5GU 60-69 years, female 223.8
GTEX-OHPN-0011-R8A-SM-33HBT 60-69 years, female 222.1
GTEX-17HII-0011-R8a-SM-79OK6 50-59 years, male 221.6
GTEX-Z93S-0011-R8a-SM-4RGNL 50-59 years, male 221.0
GTEX-13OW6-0011-R8a-SM-5L3GF 50-59 years, male 220.7
GTEX-11EI6-0011-R8a-SM-DO93M 60-69 years, male 219.1
GTEX-1B996-0011-R8b-SM-79OOS 60-69 years, male 218.4
GTEX-14JIY-0011-R8a-SM-6AJAP 60-69 years, male 218.1
GTEX-11ONC-0011-R8b-SM-5NQ87 60-69 years, male 216.7
GTEX-13CF2-0011-R8b-SM-5IJCX 60-69 years, male 215.3
GTEX-T6MN-0011-R8A-SM-32QP3 50-59 years, male 214.3
GTEX-14C5O-0011-R8a-SM-5YYAG 60-69 years, male 213.6
GTEX-11WQK-0011-R8a-SM-5BC7C 50-59 years, male 211.9
GTEX-13X6K-0011-R8b-SM-5PNZ4 60-69 years, female 211.6
GTEX-1AX9I-0011-R8a-SM-7P8PJ 60-69 years, male 211.1
GTEX-1F48J-0011-R8a-SM-9OSWW 50-59 years, female 209.6
GTEX-1EMGI-0011-R8b-SM-9QEID 60-69 years, male 209.5
GTEX-1A8G6-0011-R8a-SM-7P8PD 60-69 years, male 207.6
GTEX-1ICLZ-0011-R8b-SM-ACKX4 60-69 years, male 206.4
GTEX-1F6IF-0011-R8a-SM-9OSX5 60-69 years, male 206.2
GTEX-ZVZQ-0011-R8a-SM-51MR5 60-69 years, female 205.2
GTEX-15G19-0011-R8b-SM-7KUL1 60-69 years, male 204.8
GTEX-1J1OQ-0011-R8a-SM-ACKVE 40-49 years, female 204.2
GTEX-TSE9-0011-R8A-SM-3DB7R 60-69 years, female 203.3
GTEX-17F97-0011-R8a-SM-7DUET 50-59 years, male 203.1
GTEX-ZDXO-0011-R8a-SM-4WWD7 60-69 years, male 202.4
GTEX-1A8G7-0011-R8a-SM-7P8S6 60-69 years, male 202.4
GTEX-NL3H-0011-R8a-SM-DIPDY 60-69 years, male 201.8
GTEX-1313W-0011-R8a-SM-5DUVM 50-59 years, female 201.2
GTEX-1H1DG-0011-R8a-SM-CL54Z 70-79 years, male 200.7
GTEX-1HFI6-0011-R8a-SM-ARZLP 40-49 years, male 200.5
GTEX-1CB4H-0011-R8b-SM-CJI26 60-69 years, female 199.7
GTEX-183WM-0011-R8a-SM-7189W 70-79 years, female 198.7
GTEX-1192X-0011-R8b-SM-DO11U 50-59 years, male 197.6
GTEX-S7SE-0011-R8A-SM-2XCDG 50-59 years, male 197.4
GTEX-131XW-0011-R8a-SM-5DUWY 50-59 years, female 197.2
GTEX-1HT8W-0011-R8b-SM-CM2SX 30-39 years, male 197.2
GTEX-145LU-0011-R8b-SM-5PNZG 50-59 years, male 196.9
GTEX-11GSP-0011-R8b-SM-5NQ79 60-69 years, female 196.5
GTEX-13X6I-0011-R8a-SM-5PNZF 60-69 years, male 196.3
GTEX-1H23P-0011-R8b-SM-A9G1G 60-69 years, male 196.0
GTEX-1RLM8-0011-R8a-SM-EYYXR 50-59 years, male 196.0
GTEX-1HB9E-0011-R8b-SM-A9G1O 50-59 years, male 195.7
GTEX-ZUA1-0011-R8b-SM-51MST 40-49 years, male 193.7
GTEX-14PJM-0011-R8b-SM-69LPD 50-59 years, female 193.6
GTEX-YFC4-0011-R8a-SM-4SOK3 40-49 years, female 193.4
GTEX-1E1VI-0011-R8b-SM-ARU8E 50-59 years, male 193.3
GTEX-1IKK5-0011-R8b-SM-CJI45 60-69 years, male 192.4
GTEX-16Z82-0011-R8a-SM-7DUEX 60-69 years, male 191.7
GTEX-15CHQ-0011-R8b-SM-CNPO4 60-69 years, male 189.9
GTEX-145MH-0011-R8a-SM-5PNUL 50-59 years, male 189.3
GTEX-YJ89-0011-R8b-SM-4SOK8 60-69 years, male 189.3
GTEX-1HGF4-0011-R8b-SM-CKZP9 60-69 years, male 188.3
GTEX-11ZTS-0011-R8a-SM-57WDI 60-69 years, female 187.2
GTEX-132Q8-0011-R8b-SM-5DUWX 60-69 years, male 186.9
GTEX-1A3MX-0011-R8a-SM-7P8PI 60-69 years, male 185.6
GTEX-1477Z-0011-R8b-SM-5S2RG 60-69 years, male 183.3
GTEX-13JVG-0011-R8a-SM-5KM3E 60-69 years, male 182.9
GTEX-1GZHY-0011-R8b-SM-9OSWK 50-59 years, female 182.8
GTEX-13OVH-0011-R8b-SM-5MR35 70-79 years, male 182.2
GTEX-1GN73-0011-R8b-SM-CKZNY 60-69 years, male 181.1
GTEX-13FXS-0011-R8a-SM-5J1MN 50-59 years, male 181.0
GTEX-WZTO-0011-R8A-SM-4E3II 40-49 years, male 180.6
GTEX-12ZZX-0011-R8a-SM-5DUW8 40-49 years, female 180.5
GTEX-13QIC-0011-R8b-SM-5O9CV 60-69 years, female 180.4
GTEX-14PJO-0011-R8a-SM-6AJAL 60-69 years, male 179.2
GTEX-1E2YA-0011-R8a-SM-CKZNG 50-59 years, male 178.3
GTEX-14753-0011-R8b-SM-5S2U1 60-69 years, male 177.5
GTEX-13O3O-0011-R8b-SM-5LUAL 60-69 years, female 177.3
GTEX-X4XY-0011-R8A-SM-46MVC 60-69 years, male 177.3
GTEX-1F75W-0011-R8a-SM-9QEI4 60-69 years, male 177.1
GTEX-14PN4-0011-R8a-SM-6EU1H 50-59 years, male 176.2
GTEX-15ER7-0011-R8a-SM-7KUL2 20-29 years, female 176.1
GTEX-13NYB-0011-R8a-SM-5KM4R 40-49 years, male 175.1
GTEX-13OW7-0011-R8b-SM-5L3HR 50-59 years, male 174.0
GTEX-WHSE-0011-R8A-SM-3P5Z1 20-29 years, male 173.6
GTEX-1IKOH-0011-R8a-SM-A9SKG 60-69 years, female 172.2
GTEX-13PDP-0011-R8b-SM-5O9CS 60-69 years, male 171.9
GTEX-13RTJ-0011-R8b-SM-5O9DL 60-69 years, male 171.9
GTEX-1CAMQ-0011-R8a-SM-ARU85 40-49 years, male 171.9
GTEX-13IVO-0011-R8a-SM-5L3DY 70-79 years, male 171.0
GTEX-11OF3-0011-R8b-SM-57WCS 60-69 years, male 170.6
GTEX-17HG3-0011-R8a-SM-79OK7 30-39 years, female 170.1
GTEX-1BAJH-0011-R8a-SM-7MXUB 70-79 years, male 170.0
GTEX-13NZ8-0011-R8b-SM-5KM48 60-69 years, female 168.6
GTEX-11ZUS-0011-R8a-SM-5BC73 30-39 years, male 168.4
GTEX-11WQC-0011-R8b-SM-57WCH 60-69 years, male 167.5
GTEX-ZVT3-0011-R8b-SM-57WDJ 60-69 years, female 166.0
GTEX-1C64N-0011-R8b-SM-7MGXE 50-59 years, male 165.9
GTEX-16YQH-0011-R8a-SM-7DUFB 30-39 years, male 165.2
GTEX-NPJ7-0011-R8a-SM-2I3G2 60-69 years, female 165.2
GTEX-1F6I4-0011-R8a-SM-9QEIA 60-69 years, male 165.0
GTEX-12WSM-0011-R8a-SM-5DUWJ 60-69 years, male 164.6
GTEX-14PQA-0011-R8b-SM-6AJAB 50-59 years, female 164.0
GTEX-11DXY-0011-R8a-SM-DO11M 60-69 years, male 163.7
GTEX-18465-0011-R8b-SM-7LG6O 50-59 years, male 163.3
GTEX-QVJO-0011-R8A-SM-447C7 60-69 years, female 162.6
GTEX-1B933-0011-R8a-SM-9QEGX 50-59 years, female 160.6
GTEX-17EVQ-0011-R8a-SM-7189T 70-79 years, male 159.9
GTEX-13O3Q-0011-R8b-SM-5KM2J 50-59 years, male 159.5
GTEX-13N1W-0011-R8a-SM-5MR56 70-79 years, male 159.1
GTEX-1GF9W-0011-R8b-SM-9QEIR 60-69 years, male 159.0
GTEX-1B8L1-0011-R8b-SM-7P8ST 60-69 years, male 158.8
GTEX-1399T-0011-R8b-SM-5IJD8 60-69 years, male 158.7
GTEX-16GPK-0011-R8a-SM-79OMQ 60-69 years, male 158.6
GTEX-1H3NZ-0011-R8a-SM-CKZP6 60-69 years, male 154.6
GTEX-RU72-0011-R8A-SM-2TF61 50-59 years, female 153.9
GTEX-145LS-0011-R8b-SM-5PNXA 60-69 years, female 153.3
GTEX-11DZ1-0011-R8b-SM-DNZZI 50-59 years, male 152.9
GTEX-1I1GQ-0011-R8a-SM-C1YRS 50-59 years, male 152.0
GTEX-1C6WA-0011-R8b-SM-7P8S7 60-69 years, male 151.7
GTEX-XMD1-0011-R8A-SM-4AT48 60-69 years, male 151.6
GTEX-13OW5-0011-R8a-SM-5L3GQ 60-69 years, male 150.4
GTEX-14ASI-0011-R8b-SM-5S2UB 60-69 years, male 148.2
GTEX-QVUS-0011-R8A-SM-3GAD7 60-69 years, female 148.2
GTEX-ZXG5-0011-R8a-SM-57WD1 60-69 years, male 147.1
GTEX-1GTWX-0011-R8a-SM-CE6RM 60-69 years, male 145.2
GTEX-14LZ3-0011-R8b-SM-COH3M 60-69 years, female 140.8
GTEX-R55E-0011-R8A-SM-2TC66 20-29 years, male 140.5
GTEX-1F52S-0011-R8a-SM-9OSXA 60-69 years, female 139.8
GTEX-13OW8-0011-R8a-SM-5L3G5 60-69 years, male 136.9
GTEX-1I1CD-0011-R8b-SM-CJI3X 60-69 years, female 136.4
GTEX-1C6VR-0011-R8b-SM-7MXUF 60-69 years, male 135.9
GTEX-13G51-0011-R8b-SM-5LZZ4 60-69 years, male 135.2
GTEX-1GN1V-0011-R8a-SM-CKZNV 60-69 years, male 134.6
GTEX-1GN2E-0011-R8a-SM-CE6RK 60-69 years, male 134.0
GTEX-PWO3-0011-R8A-SM-2I5GD 60-69 years, female 131.5
GTEX-NL4W-0011-R8a-SM-2I3G4 50-59 years, male 131.2
GTEX-1F88E-0011-R8a-SM-CJI2H 60-69 years, female 128.7
GTEX-T5JC-0011-R8A-SM-32PLM 20-29 years, male 127.4
GTEX-1HCVE-0011-R8a-SM-ARU7A 50-59 years, male 126.8
GTEX-13NZA-0011-R8b-SM-5KM2Q 60-69 years, male 123.7
GTEX-X4XX-0011-R8B-SM-46MWM 60-69 years, male 123.6
GTEX-ZF28-0011-R8a-SM-4WWFW 60-69 years, male 121.4
GTEX-WVLH-0011-R8A-SM-3MJFC 50-59 years, male 119.8
GTEX-1GF9V-0011-R8b-SM-CE6RB 60-69 years, male 118.3
GTEX-18464-0011-R8a-SM-72D4Z 50-59 years, male 117.7
GTEX-X585-0011-R8A-SM-46MUX 50-59 years, male 112.3
GTEX-OXRN-0011-R8A-SM-E9TI1 50-59 years, male 108.9
GTEX-145MI-0011-R8b-SM-5PNZ9 60-69 years, female 106.6
GTEX-14BIL-0011-R8b-SM-69LQK 50-59 years, male 101.3
GTEX-16NPV-0011-R8a-SM-7EPH8 50-59 years, female 100.2
GTEX-1CB4J-0011-R8a-SM-9QEHU 60-69 years, male 93.4
GTEX-X4EP-0011-R8B-SM-4QASL 60-69 years, female 50.1
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HYPOTHALAMUS - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

110.1
Pig sample Sample description nTPM
Hypothalamus
nTPM: 110.1
Samples: 4

Max nTPM: 144.7
Min nTPM: 73.4
Sample A Female 144.7
Sample B Female 117.3
Sample C Male 105.0
Sample D Male 73.4

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