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TISSUE PRIMARY DATA HYPOTHALAMUS Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM
ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MIDBRAIN NASOPHARYNX
ORAL MUCOSA OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE
SMOOTH MUSCLE SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
ANTIBODIES
AND
VALIDATION
Dictionary
Tissue proteome
Hypothalamus
HYPOTHALAMUS - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:277.4 nTPM
HPA Brain:199.9 nTPM
GTEx:277.4 nTPM
Mouse:336.4 nTPM

HYPOTHALAMUS - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

199.9
Sample id Sample description nTPM
Arcuate nucleus
nTPM: 149.3
2226 Male, age 75, left hemisphere 163.2
1961 Female, age 42, unknown 135.4
Dorsomedial nucleus
nTPM: 139.2
2041 Female, age 72, unknown 150.7
2017 Female, age 42, unknown 134.1
1989 Male, age 62, unknown 132.9
Lateral hypothalamic area
nTPM: 164.3
2228 Male, age 66, unknown 187.3
2271 Male, age 75, both hemispheres 178.7
1791 Male, age 80, right hemisphere 163.7
2412 Male, age 62, unknown 127.5
Mammillary body
nTPM: 170.4
1923 Female, age 72, unknown 191.1
1945 Male, age 80, right hemisphere 168.8
1834 Female, age 42, unknown 165.4
1948 Female, age 72, unknown 163.8
2413 Male, age 66, unknown 162.8
Paraventricular nucleus
nTPM: 157.6
2700 Male, age 62, unknown 157.6
Preoptic area
nTPM: 148.5
1861 Female, age 42, unknown 152.9
2414 Female, age 72, unknown 148.8
1907 Male, age 80, right hemisphere 143.9
Supraoptic nucleus
nTPM: 199.9
1894 Female, age 72, unknown 218.7
2043 Male, age 62, unknown 204.2
2835 Female, age 72, unknown 176.7
Ventromedial nucleus
nTPM: 139.6
1982 Female, age 72, unknown 147.7
1822 Female, age 42, unknown 131.6

HYPOTHALAMUS - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

277.4
GTEx sample id Sample description nTPM
Brain - Hypothalamus
Average nTPM: 277.4
Samples: 202

Max nTPM: 560.7
Min nTPM: 173.5
Std nTPM: 59.8
Median nTPM: 264.1
GTEX-139TS-0011-R8a-SM-5J1NP 60-69 years, male 560.7
GTEX-14LLW-0011-R8a-SM-62LFG 70-79 years, female 522.5
GTEX-144GL-0011-R8a-SM-5Q5B1 50-59 years, male 476.3
GTEX-145MI-0011-R8b-SM-5PNZ9 60-69 years, female 466.7
GTEX-14753-0011-R8b-SM-5S2U1 60-69 years, male 432.9
GTEX-NL3H-0011-R8a-SM-DIPDY 60-69 years, male 427.1
GTEX-11EMC-0011-R8b-SM-DO91Z 60-69 years, female 415.7
GTEX-X4XY-0011-R8A-SM-46MVC 60-69 years, male 408.7
GTEX-15DCD-0011-R8b-SM-7KUEF 70-79 years, female 399.5
GTEX-1B8SF-0011-R8b-SM-7P8SX 60-69 years, male 398.0
GTEX-11DZ1-0011-R8b-SM-DNZZI 50-59 years, male 395.5
GTEX-RNOR-0011-R8A-SM-EZ6MN 50-59 years, female 391.5
GTEX-1B8SG-0011-R8b-SM-7IGNW 50-59 years, male 387.4
GTEX-11EI6-0011-R8a-SM-DO93M 60-69 years, male 380.2
GTEX-1CB4J-0011-R8a-SM-9QEHU 60-69 years, male 374.9
GTEX-1GN1V-0011-R8a-SM-CKZNV 60-69 years, male 370.9
GTEX-Y8DK-0011-R8B-SM-EYYVQ 60-69 years, male 368.8
GTEX-13IVO-0011-R8a-SM-5L3DY 70-79 years, male 354.7
GTEX-WWYW-0011-R8A-SM-3NB3S 50-59 years, female 354.5
GTEX-13NYS-0011-R8a-SM-5MR5H 60-69 years, male 347.6
GTEX-1ICLZ-0011-R8b-SM-ACKX4 60-69 years, male 347.2
GTEX-183WM-0011-R8a-SM-7189W 70-79 years, female 345.8
GTEX-1RLM8-0011-R8a-SM-EYYXR 50-59 years, male 339.7
GTEX-17EVQ-0011-R8a-SM-7189T 70-79 years, male 339.1
GTEX-13OVJ-0011-R8b-SM-5L3FS 50-59 years, female 333.0
GTEX-1IY9M-0011-R8a-SM-EYYWW 60-69 years, male 329.9
GTEX-1H23P-0011-R8b-SM-A9G1G 60-69 years, male 328.0
GTEX-13FLW-0011-R8b-SM-5J1MZ 50-59 years, male 326.2
GTEX-16XZZ-0011-R8b-SM-7LT8S 60-69 years, male 324.2
GTEX-1HCU6-0011-R8a-SM-CJI3R 60-69 years, female 323.7
GTEX-1C64N-0011-R8b-SM-7MGXE 50-59 years, male 323.5
GTEX-11DYG-0011-R8a-SM-DO93F 60-69 years, male 323.3
GTEX-WVLH-0011-R8A-SM-3MJFC 50-59 years, male 322.1
GTEX-1A3MX-0011-R8a-SM-7P8PI 60-69 years, male 321.6
GTEX-11H98-0011-R8a-SM-5NQ8V 50-59 years, male 321.3
GTEX-1C6WA-0011-R8b-SM-7P8S7 60-69 years, male 320.9
GTEX-1CB4H-0011-R8b-SM-CJI26 60-69 years, female 320.4
GTEX-OHPN-0011-R8A-SM-33HBT 60-69 years, female 320.2
GTEX-OXRN-0011-R8A-SM-E9TI1 50-59 years, male 320.2
GTEX-1F75A-0011-R8a-SM-CL539 50-59 years, male 319.8
GTEX-13PDP-0011-R8b-SM-5O9CS 60-69 years, male 318.6
GTEX-1A8G7-0011-R8a-SM-7P8S6 60-69 years, male 318.4
GTEX-1H3O1-0011-R8a-SM-CL555 60-69 years, male 317.6
GTEX-1CAMQ-0011-R8a-SM-ARU85 40-49 years, male 316.1
GTEX-1HBPH-0011-R8b-SM-CL556 40-49 years, female 315.9
GTEX-1HGF4-0011-R8b-SM-CKZP9 60-69 years, male 315.7
GTEX-1I1GS-0011-R8b-SM-CKZPE 60-69 years, male 310.8
GTEX-11WQK-0011-R8a-SM-5BC7C 50-59 years, male 309.5
GTEX-TSE9-0011-R8A-SM-3DB7R 60-69 years, female 306.4
GTEX-1F88E-0011-R8a-SM-CJI2H 60-69 years, female 303.5
GTEX-1445S-0011-R8a-SM-5PNWX 60-69 years, male 303.0
GTEX-1F52S-0011-R8a-SM-9OSXA 60-69 years, female 302.8
GTEX-13SLX-0011-R8b-SM-5PNWZ 50-59 years, female 300.6
GTEX-13NZ8-0011-R8b-SM-5KM48 60-69 years, female 300.1
GTEX-1CB4G-0011-R8b-SM-9WG7H 60-69 years, male 300.1
GTEX-13OW5-0011-R8a-SM-5L3GQ 60-69 years, male 299.5
GTEX-1F6I4-0011-R8a-SM-9QEIA 60-69 years, male 299.1
GTEX-15CHQ-0011-R8b-SM-CNPO4 60-69 years, male 298.9
GTEX-X261-0011-R8A-SM-4E3I5 50-59 years, male 298.7
GTEX-13X6I-0011-R8a-SM-5PNZF 60-69 years, male 297.0
GTEX-1GMR8-0011-R8a-SM-CKZNX 50-59 years, female 296.0
GTEX-1F75W-0011-R8a-SM-9QEI4 60-69 years, male 295.8
GTEX-1H1CY-0011-R8b-SM-CJI31 60-69 years, female 293.2
GTEX-11TTK-0011-R8b-SM-DO111 60-69 years, female 291.5
GTEX-N7MS-0011-R8a-SM-2YUMK 60-69 years, male 290.7
GTEX-13FXS-0011-R8a-SM-5J1MN 50-59 years, male 289.7
GTEX-12WSA-0011-R8a-SM-5P9EX 60-69 years, male 289.4
GTEX-1H1ZS-0011-R8b-SM-A9SKA 70-79 years, male 288.7
GTEX-XLM4-0011-R8A-SM-4AT44 60-69 years, male 288.1
GTEX-1H1DG-0011-R8a-SM-CL54Z 70-79 years, male 287.6
GTEX-1J8Q2-0011-R8b-SM-D4P2E 60-69 years, male 287.6
GTEX-P44H-0011-R8A-SM-2XCEL 40-49 years, male 287.3
GTEX-WHSE-0011-R8A-SM-3P5Z1 20-29 years, male 286.8
GTEX-ZAB4-0011-R8b-SM-4SOKF 40-49 years, male 284.9
GTEX-1GN2E-0011-R8a-SM-CE6RK 60-69 years, male 284.6
GTEX-ZF28-0011-R8a-SM-4WWFW 60-69 years, male 283.1
GTEX-QVJO-0011-R8A-SM-447C7 60-69 years, female 282.8
GTEX-13QJC-0011-R8b-SM-5S2U6 60-69 years, female 282.3
GTEX-1I1CD-0011-R8b-SM-CJI3X 60-69 years, female 282.1
GTEX-XMD1-0011-R8A-SM-4AT48 60-69 years, male 281.7
GTEX-13CIG-0011-R8b-SM-5LZX5 50-59 years, male 278.5
GTEX-YJ89-0011-R8b-SM-4SOK8 60-69 years, male 275.3
GTEX-1IKK5-0011-R8b-SM-CJI45 60-69 years, male 274.9
GTEX-1GTWX-0011-R8a-SM-CE6RM 60-69 years, male 274.6
GTEX-N7MT-0011-R8a-SM-2I5GU 60-69 years, female 274.1
GTEX-11GSP-0011-R8b-SM-5NQ79 60-69 years, female 273.6
GTEX-14PJO-0011-R8a-SM-6AJAL 60-69 years, male 273.3
GTEX-16NPV-0011-R8a-SM-7EPH8 50-59 years, female 272.7
GTEX-QVUS-0011-R8A-SM-3GAD7 60-69 years, female 271.8
GTEX-1GZHY-0011-R8b-SM-9OSWK 50-59 years, female 271.8
GTEX-1BAJH-0011-R8a-SM-7MXUB 70-79 years, male 271.6
GTEX-145LU-0011-R8b-SM-5PNZG 50-59 years, male 271.3
GTEX-1HFI6-0011-R8a-SM-ARZLP 40-49 years, male 270.6
GTEX-1GN1U-0011-R8a-SM-CL537 50-59 years, female 270.4
GTEX-18465-0011-R8b-SM-7LG6O 50-59 years, male 268.8
GTEX-15G19-0011-R8b-SM-7KUL1 60-69 years, male 268.3
GTEX-11WQC-0011-R8b-SM-57WCH 60-69 years, male 267.6
GTEX-1HCVE-0011-R8a-SM-ARU7A 50-59 years, male 266.7
GTEX-1J1OQ-0011-R8a-SM-ACKVE 40-49 years, female 266.0
GTEX-17HII-0011-R8a-SM-79OK6 50-59 years, male 265.0
GTEX-1477Z-0011-R8b-SM-5S2RG 60-69 years, male 264.1
GTEX-1EMGI-0011-R8b-SM-9QEID 60-69 years, male 264.1
GTEX-132Q8-0011-R8b-SM-5DUWX 60-69 years, male 263.3
GTEX-ZVZQ-0011-R8a-SM-51MR5 60-69 years, female 263.2
GTEX-13CF2-0011-R8b-SM-5IJCX 60-69 years, male 262.5
GTEX-1GF9W-0011-R8b-SM-9QEIR 60-69 years, male 262.2
GTEX-13JVG-0011-R8a-SM-5KM3E 60-69 years, male 259.9
GTEX-14LZ3-0011-R8b-SM-COH3M 60-69 years, female 259.9
GTEX-1HBPI-0011-R8a-SM-A9G1S 50-59 years, male 259.8
GTEX-T6MN-0011-R8A-SM-32QP3 50-59 years, male 258.3
GTEX-14PQA-0011-R8b-SM-6AJAB 50-59 years, female 258.0
GTEX-1GZ4I-0011-R8b-SM-9WG76 50-59 years, male 257.1
GTEX-1A8G6-0011-R8a-SM-7P8PD 60-69 years, male 255.5
GTEX-1B8L1-0011-R8b-SM-7P8ST 60-69 years, male 255.3
GTEX-147F4-0011-R8b-SM-5S2UN 50-59 years, male 255.1
GTEX-YFC4-0011-R8a-SM-4SOK3 40-49 years, female 255.0
GTEX-13SLW-0011-R8b-SM-5SI64 70-79 years, male 254.9
GTEX-1192X-0011-R8b-SM-DO11U 50-59 years, male 254.7
GTEX-NPJ8-0011-R8a-SM-2HMLG 40-49 years, male 254.4
GTEX-11ZUS-0011-R8a-SM-5BC73 30-39 years, male 253.8
GTEX-1399T-0011-R8b-SM-5IJD8 60-69 years, male 253.7
GTEX-13O3O-0011-R8b-SM-5LUAL 60-69 years, female 253.4
GTEX-17HG3-0011-R8a-SM-79OK7 30-39 years, female 253.1
GTEX-13OVL-0011-R8a-SM-5L3HH 50-59 years, male 252.6
GTEX-RU72-0011-R8A-SM-2TF61 50-59 years, female 252.6
GTEX-1AX9I-0011-R8a-SM-7P8PJ 60-69 years, male 252.6
GTEX-1I1HK-0011-R8b-SM-E8VN9 60-69 years, male 252.6
GTEX-14C5O-0011-R8a-SM-5YYAG 60-69 years, male 252.3
GTEX-1IKOH-0011-R8a-SM-A9SKG 60-69 years, female 252.2
GTEX-1GN73-0011-R8b-SM-CKZNY 60-69 years, male 250.7
GTEX-13X6K-0011-R8b-SM-5PNZ4 60-69 years, female 250.5
GTEX-11ZTS-0011-R8a-SM-57WDI 60-69 years, female 250.3
GTEX-13OVH-0011-R8b-SM-5MR35 70-79 years, male 249.8
GTEX-Z93S-0011-R8a-SM-4RGNL 50-59 years, male 249.1
GTEX-X4XX-0011-R8B-SM-46MWM 60-69 years, male 246.9
GTEX-13OW8-0011-R8a-SM-5L3G5 60-69 years, male 245.9
GTEX-1E2YA-0011-R8a-SM-CKZNG 50-59 years, male 243.7
GTEX-ZVT3-0011-R8b-SM-57WDJ 60-69 years, female 243.6
GTEX-NL4W-0011-R8a-SM-2I3G4 50-59 years, male 243.5
GTEX-ZXG5-0011-R8a-SM-57WD1 60-69 years, male 243.2
GTEX-16GPK-0011-R8a-SM-79OMQ 60-69 years, male 243.0
GTEX-13112-0011-R8b-SM-664OV 50-59 years, male 242.7
GTEX-1313W-0011-R8a-SM-5DUVM 50-59 years, female 242.5
GTEX-13FLV-0011-R8a-SM-5LZZE 50-59 years, male 241.9
GTEX-13QIC-0011-R8b-SM-5O9CV 60-69 years, female 240.1
GTEX-11OF3-0011-R8b-SM-57WCS 60-69 years, male 240.0
GTEX-1IDJH-0011-R8b-SM-ARZLL 70-79 years, male 239.9
GTEX-PWO3-0011-R8A-SM-2I5GD 60-69 years, female 239.6
GTEX-1B996-0011-R8b-SM-79OOS 60-69 years, male 239.4
GTEX-1GF9V-0011-R8b-SM-CE6RB 60-69 years, male 238.2
GTEX-13RTJ-0011-R8b-SM-5O9DL 60-69 years, male 238.0
GTEX-ZUA1-0011-R8b-SM-51MST 40-49 years, male 237.6
GTEX-14BIL-0011-R8b-SM-69LQK 50-59 years, male 236.9
GTEX-1HT8W-0011-R8b-SM-CM2SX 30-39 years, male 236.9
GTEX-1I1GQ-0011-R8a-SM-C1YRS 50-59 years, male 236.8
GTEX-1HSKV-0011-R8a-SM-CL54X 60-69 years, male 236.4
GTEX-16YQH-0011-R8a-SM-7DUFB 30-39 years, male 236.2
GTEX-1GZ2Q-0011-R8a-SM-CE6RO 40-49 years, male 235.9
GTEX-11DXY-0011-R8a-SM-DO11M 60-69 years, male 235.7
GTEX-1H3VE-0011-R8b-SM-A9G1L 40-49 years, male 235.4
GTEX-1F48J-0011-R8a-SM-9OSWW 50-59 years, female 234.5
GTEX-17F97-0011-R8a-SM-7DUET 50-59 years, male 234.4
GTEX-13O3Q-0011-R8b-SM-5KM2J 50-59 years, male 234.3
GTEX-1C6VR-0011-R8b-SM-7MXUF 60-69 years, male 234.3
GTEX-131XW-0011-R8a-SM-5DUWY 50-59 years, female 232.3
GTEX-131XH-0011-R8a-SM-5EGLL 50-59 years, male 231.6
GTEX-14JIY-0011-R8a-SM-6AJAP 60-69 years, male 230.5
GTEX-13X6J-0011-R8b-SM-5PNUA 50-59 years, male 228.0
GTEX-16Z82-0011-R8a-SM-7DUEX 60-69 years, male 227.6
GTEX-18464-0011-R8a-SM-72D4Z 50-59 years, male 226.5
GTEX-1B933-0011-R8a-SM-9QEGX 50-59 years, female 225.9
GTEX-QDT8-0011-R8A-SM-32PKE 30-39 years, female 225.2
GTEX-13N1W-0011-R8a-SM-5MR56 70-79 years, male 225.0
GTEX-13NYB-0011-R8a-SM-5KM4R 40-49 years, male 225.0
GTEX-14PJM-0011-R8b-SM-69LPD 50-59 years, female 224.0
GTEX-1E1VI-0011-R8b-SM-ARU8E 50-59 years, male 223.6
GTEX-1H3NZ-0011-R8a-SM-CKZP6 60-69 years, male 223.4
GTEX-12WSM-0011-R8a-SM-5DUWJ 60-69 years, male 223.0
GTEX-14PN4-0011-R8a-SM-6EU1H 50-59 years, male 220.1
GTEX-13NZA-0011-R8b-SM-5KM2Q 60-69 years, male 219.7
GTEX-1F6IF-0011-R8a-SM-9OSX5 60-69 years, male 218.5
GTEX-145MH-0011-R8a-SM-5PNUL 50-59 years, male 217.5
GTEX-Q2AG-0011-R8A-SM-2HMK5 40-49 years, female 216.9
GTEX-R55E-0011-R8A-SM-2TC66 20-29 years, male 216.4
GTEX-1HB9E-0011-R8b-SM-A9G1O 50-59 years, male 215.4
GTEX-11ONC-0011-R8b-SM-5NQ87 60-69 years, male 214.2
GTEX-X585-0011-R8A-SM-46MUX 50-59 years, male 212.7
GTEX-ZDXO-0011-R8a-SM-4WWD7 60-69 years, male 212.2
GTEX-13G51-0011-R8b-SM-5LZZ4 60-69 years, male 204.5
GTEX-145LS-0011-R8b-SM-5PNXA 60-69 years, female 203.1
GTEX-NPJ7-0011-R8a-SM-2I3G2 60-69 years, female 203.1
GTEX-QMR6-0011-R8A-SM-32PKJ 50-59 years, male 202.8
GTEX-14ASI-0011-R8b-SM-5S2UB 60-69 years, male 202.4
GTEX-15ER7-0011-R8a-SM-7KUL2 20-29 years, female 196.7
GTEX-13OW7-0011-R8b-SM-5L3HR 50-59 years, male 196.4
GTEX-T5JC-0011-R8A-SM-32PLM 20-29 years, male 195.8
GTEX-X4EP-0011-R8B-SM-4QASL 60-69 years, female 195.3
GTEX-17EVP-0011-R8b-SM-7DUF9 40-49 years, male 194.7
GTEX-S7SE-0011-R8A-SM-2XCDG 50-59 years, male 191.3
GTEX-WZTO-0011-R8A-SM-4E3II 40-49 years, male 187.1
GTEX-12ZZX-0011-R8a-SM-5DUW8 40-49 years, female 186.8
GTEX-13OW6-0011-R8a-SM-5L3GF 50-59 years, male 173.5
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HYPOTHALAMUS - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

336.4
Mouse sample Sample description nTPM
Hypothalamus
nTPM: 336.4
Samples: 4

Max nTPM: 371.5
Min nTPM: 309.4
Sample A Male 327.2
Sample B Male 371.5
Sample C Female 337.4
Sample D Female 309.4

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