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BRAIN BASAL GANGLIA Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS MEDULLA OBLONGATA
MIDBRAIN OLFACTORY BULB PITUITARY GLAND PONS RETINA SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
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VALIDATION
Brain proteome
Basal ganglia
BASAL GANGLIA - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glial cells: Medium
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:117.0 nTPM
HPA Brain:370.9 nTPM
GTEx:117.0 nTPM
FANTOM5:372.8 Scaled Tags Per Million
Pig:141.4 nTPM
Mouse:7.8 nTPM
Allen mouse:5.5 Expression energy

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA051300Antibody HPA054630
Glial cells MediumMedium
Neuronal cells -Not detected



BASAL GANGLIA - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

370.9
Sample id Sample description nTPM
Caudate nucleus
nTPM: 120.7
2288 Male, age 75, left hemisphere 191.9
2481 Female, age 94, left hemisphere 141.2
2289 Male, age 61, right hemisphere 132.6
2846 Female, age 79, unknown 114.9
2290 Female, age 72, unknown 112.9
1854 Male, age 80, left hemisphere 109.7
1781 Male, age 74, unknown 90.6
1857 Female, age 85, left hemisphere 71.6
Globus pallidus, externus
nTPM: 370.9
2646 Male, age 61, right hemisphere 573.6
2567 Female, age 72, unknown 430.7
1996 Male, age 80, right hemisphere 369.1
2772 Female, age 79, unknown 246.7
2395 Male, age 75, both hemispheres 234.4
Globus pallidus, internus
nTPM: 341.5
2111 Female, age 85, right hemisphere 445.8
2566 Female, age 72, unknown 384.7
2483 Female, age 94, right hemisphere 363.1
2778 Female, age 91, both hemispheres 342.6
2037 Male, age 80, right hemisphere 299.6
1818 Male, age 74, unknown 277.2
2287 Male, age 75, right hemisphere 277.2
Nucleus accumbens
nTPM: 133.9
2391 Female, age 94, left hemisphere 209.0
2732 Male, age 80, right hemisphere 176.3
2698 Female, age 72, unknown 173.7
2286 Male, age 75, left hemisphere 140.3
2824 Male, age 61, right hemisphere 109.6
1806 Female, age 85, left hemisphere 101.1
1783 Male, age 74, unknown 96.2
1856 Female, age 91, right hemisphere 64.8
Nucleus basalis of Meynert
nTPM: 288.8
2569 Male, age 61, both hemispheres 617.5
2484 Female, age 94, left hemisphere 206.2
2821 Male, age 75, both hemispheres 171.0
2393 Male, age 80, right hemisphere 160.5
Nucleus of the diagonal band
nTPM: 63.8
1812 Female, age 91, both hemispheres 95.0
1979 Male, age 74, unknown 78.7
2029 Male, age 61, right hemisphere 53.7
2775 Male, age 80, right hemisphere 47.6
2195 Female, age 85, both hemispheres 43.9
Putamen
nTPM: 166.0
2647 Male, age 75, left hemisphere 292.1
2489 Female, age 72, unknown 227.1
1829 Male, age 74, unknown 206.3
2482 Female, age 94, left hemisphere 149.2
1937 Female, age 91, right hemisphere 122.0
2466 Female, age 79, unknown 108.3
1838 Male, age 80, right hemisphere 57.4
Septal nuclei
nTPM: 94.2
2394 Male, age 61, left hemisphere 172.5
2199 Male, age 80, right hemisphere 152.4
2059 Female, age 85, both hemispheres 91.7
2629 Female, age 94, right hemisphere 81.1
2009 Female, age 91, both hemispheres 70.7
2031 Female, age 72, unknown 53.0
1960 Male, age 74, unknown 38.1
Stria terminalis, bed nucleus
nTPM: 98.6
2201 Male, age 74, unknown 147.6
1974 Female, age 91, both hemispheres 97.2
2486 Female, age 94, both hemispheres 51.1

BASAL GANGLIA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

117.0
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 81.9
Samples: 246

Max nTPM: 281.7
Min nTPM: 15.4
Std nTPM: 43.7
Median nTPM: 70.1
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 281.7
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 238.8
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 222.7
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 212.9
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 195.6
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 195.2
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 189.8
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 183.7
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 179.4
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 174.0
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 169.7
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 168.2
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 167.8
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 163.9
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 163.2
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 161.8
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 157.7
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 155.2
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 154.5
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 154.1
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 152.2
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 151.1
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 148.0
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 142.2
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 141.0
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 138.8
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 137.1
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 136.9
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 133.9
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 133.9
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 129.7
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 129.2
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 128.6
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 128.1
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 126.2
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 123.5
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 123.1
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 120.3
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 119.4
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 118.7
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 118.7
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 118.0
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 117.6
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 117.3
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 113.7
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 113.1
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 113.0
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 112.2
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 111.9
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 111.7
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 111.7
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 111.0
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 110.9
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 109.1
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 109.0
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 108.6
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 108.2
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 108.1
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 107.7
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 107.5
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 107.3
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 107.0
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 106.0
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 105.4
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 103.7
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 103.2
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 102.9
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 102.7
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 102.6
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 101.9
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 99.9
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 99.8
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 99.6
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 98.0
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 96.9
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 95.8
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 95.3
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 94.7
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 94.4
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 93.7
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 93.3
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 92.1
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 91.9
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 91.6
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 90.9
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 90.9
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 90.7
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 90.2
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 89.9
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 89.6
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 89.4
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 88.8
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 88.1
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 88.0
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 87.9
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 87.6
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 87.4
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 86.8
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 84.9
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 84.2
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 82.1
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 81.5
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 81.5
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 81.3
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 81.1
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 80.8
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 80.8
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 79.6
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 79.4
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 79.1
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 78.9
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 78.8
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 78.4
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 77.7
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 77.7
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 77.1
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 74.7
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 74.7
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 73.6
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 72.8
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 72.6
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 71.7
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 70.2
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 69.9
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 69.9
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 69.3
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 69.2
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 69.1
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 68.3
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 68.1
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 67.9
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 67.7
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 67.7
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 67.6
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 67.0
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 66.1
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 66.0
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 65.6
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 65.5
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 65.1
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 64.8
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 64.6
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 63.7
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 63.6
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 63.6
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 63.4
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 63.3
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 62.2
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 62.1
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 62.0
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 61.7
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 61.5
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 61.1
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 60.7
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 60.3
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 60.3
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 59.6
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 58.4
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 57.8
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 57.4
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 56.8
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 55.7
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 55.6
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 55.4
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 55.0
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 54.3
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 54.0
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 53.5
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 53.5
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 52.8
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 52.0
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 51.4
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 51.2
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 51.0
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 50.8
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 50.4
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 50.1
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 49.9
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 49.6
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 49.5
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 49.3
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 49.1
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 49.0
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 48.9
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 48.8
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 48.8
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 48.6
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 48.5
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 48.2
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 48.1
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 47.9
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 47.8
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 47.6
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 47.3
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 47.1
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 46.9
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 46.5
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 46.1
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 45.6
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 45.4
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 45.3
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 44.6
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 44.4
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 44.4
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 44.2
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 44.0
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 43.4
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 43.1
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 42.0
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 40.8
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 40.5
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 40.1
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 40.0
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 39.2
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 39.0
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 38.6
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 37.5
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 37.5
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 37.2
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 36.8
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 36.8
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 36.4
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 36.1
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 35.8
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 35.6
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 35.4
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 35.4
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 35.4
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 34.1
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 34.0
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 32.9
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 32.7
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 32.4
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 31.2
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 29.9
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 28.2
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 26.4
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 26.2
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 26.0
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 25.5
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 24.9
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 21.9
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 21.8
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 20.6
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 20.2
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 15.4
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Brain - Nucleus accumbens (basal ganglia)
Average nTPM: 49.5
Samples: 246

Max nTPM: 304.6
Min nTPM: 8.6
Std nTPM: 42.9
Median nTPM: 36.0
GTEX-1HFI6-0011-R6b-SM-CM2SR 40-49 years, male 304.6
GTEX-11DYG-0011-R6a-SM-DO936 60-69 years, male 284.4
GTEX-YJ89-0011-R6a-SM-4V6GN 60-69 years, male 208.0
GTEX-ZUA1-0011-R6b-SM-4YCDD 40-49 years, male 207.9
GTEX-1I1HK-0011-R6b-SM-CM2T9 60-69 years, male 207.3
GTEX-16Z82-0011-R6a-SM-7IGLV 60-69 years, male 180.7
GTEX-131XW-0011-R6b-SM-5K7XY 50-59 years, female 164.7
GTEX-YFC4-0011-R6b-SM-4V6E1 40-49 years, female 153.3
GTEX-1H3O1-0011-R6b-SM-CL54U 60-69 years, male 140.2
GTEX-1IGQW-0011-R6a-SM-CM2TC 60-69 years, male 132.2
GTEX-1EWIQ-0011-R6a-SM-ARU8G 70-79 years, female 132.0
GTEX-RU72-0011-R6A-SM-2TF71 50-59 years, female 130.0
GTEX-11PRG-0011-R6b-SM-DO923 50-59 years, male 124.5
GTEX-1IKOH-0011-R6b-SM-A9G1W 60-69 years, female 124.1
GTEX-1H23P-0011-R6b-SM-A9G1H 60-69 years, male 123.5
GTEX-1H4P4-0011-R6a-SM-ARZLR 50-59 years, male 115.9
GTEX-13NYB-0011-R6b-SM-5MR51 40-49 years, male 113.1
GTEX-139TS-0011-R6a-SM-5J2OB 60-69 years, male 113.0
GTEX-13FHP-0011-R6b-SM-5LZY6 50-59 years, male 112.1
GTEX-WL46-0011-R6A-SM-3LK6X 50-59 years, male 110.0
GTEX-X4XY-0011-R6B-SM-46MVB 60-69 years, male 110.0
GTEX-WVLH-0011-R6A-SM-3MJFZ 50-59 years, male 109.1
GTEX-13PDP-0011-R6b-SM-5O9D5 60-69 years, male 107.4
GTEX-ZAB4-0011-R6a-SM-4SOKD 40-49 years, male 102.8
GTEX-Y8DK-0011-R6A-SM-4V6EG 60-69 years, male 101.7
GTEX-ZV68-0011-R6a-SM-51MSR 50-59 years, female 101.6
GTEX-11DXW-0011-R6a-SM-DO11N 40-49 years, male 101.2
GTEX-1N2DW-0011-R6a-SM-EZ6MW 50-59 years, male 101.0
GTEX-1IL2U-0011-R6a-SM-ARZLG 60-69 years, male 100.4
GTEX-X261-0011-R6B-SM-4E3J8 50-59 years, male 99.6
GTEX-1EN7A-0011-R6b-SM-9QEHW 40-49 years, male 93.0
GTEX-11TTK-0011-R6b-SM-DNZZW 60-69 years, female 89.0
GTEX-1LB8K-0011-R6a-SM-EXURT 50-59 years, male 87.1
GTEX-1C6WA-0011-R6a-SM-7PBYP 60-69 years, male 85.5
GTEX-S7SE-0011-R6A-SM-2XCD9 50-59 years, male 84.0
GTEX-11GSP-0011-R6b-SM-57WBQ 60-69 years, female 83.0
GTEX-1F48J-0011-R6a-SM-CJI2F 50-59 years, female 82.2
GTEX-18465-0011-R6a-SM-7LG6M 50-59 years, male 81.5
GTEX-12ZZW-0011-R6a-SM-5DUVZ 50-59 years, male 80.7
GTEX-1I1GQ-0011-R6b-SM-CE6SE 50-59 years, male 75.5
GTEX-13G51-0011-R6b-SM-5LZX4 60-69 years, male 74.7
GTEX-1IKK5-0011-R6b-SM-A9SLY 60-69 years, male 74.4
GTEX-1JJEA-0011-R6a-SM-EXUS1 60-69 years, male 74.4
GTEX-17HHY-0011-R6b-SM-7189Z 50-59 years, male 74.2
GTEX-S7PM-0011-R6A-SM-3NM8F 60-69 years, male 74.2
GTEX-11NUK-0011-R6a-SM-DO93O 50-59 years, male 74.0
GTEX-Q2AG-0011-R6A-SM-2HML7 40-49 years, female 72.3
GTEX-R55E-0011-R6A-SM-2TC5T 20-29 years, male 71.7
GTEX-1J8Q2-0011-R6a-SM-CKZPG 60-69 years, male 70.7
GTEX-P44H-0011-R6A-SM-2XCF3 40-49 years, male 69.5
GTEX-1RLM8-0011-R6a-SM-EYYXS 50-59 years, male 69.1
GTEX-13N1W-0011-R6a-SM-5MR43 70-79 years, male 68.5
GTEX-13SLX-0011-R6a-SM-5PNX4 50-59 years, female 68.5
GTEX-11WQC-0011-R6a-SM-5BC77 60-69 years, male 68.0
GTEX-1E2YA-0011-R6b-SM-CE6R2 50-59 years, male 67.6
GTEX-13PL6-0011-R6a-SM-5O9C5 40-49 years, female 66.5
GTEX-16XZZ-0011-R6a-SM-7IGNE 60-69 years, male 64.8
GTEX-1H3VE-0011-R6b-SM-A9G1M 40-49 years, male 63.3
GTEX-1GZHY-0011-R6a-SM-9OSWL 50-59 years, female 61.9
GTEX-15G19-0011-R6b-SM-7KUM3 60-69 years, male 61.2
GTEX-ZF28-0011-R6a-SM-4WKHI 60-69 years, male 61.1
GTEX-1GN2E-0011-R6b-SM-9QEII 60-69 years, male 60.8
GTEX-1I1GS-0011-R6b-SM-CMKHE 60-69 years, male 60.0
GTEX-1F88E-0011-R6a-SM-CKZNW 60-69 years, female 59.1
GTEX-N7MT-0011-R6a-SM-2I3G3 60-69 years, female 57.7
GTEX-14PHW-0011-R6b-SM-5YYAR 60-69 years, female 57.5
GTEX-ZE7O-0011-R6a-SM-57WCI 50-59 years, female 57.5
GTEX-11O72-0011-R6a-SM-DNZZQ 40-49 years, male 57.2
GTEX-QDT8-0011-R6A-SM-32PKI 30-39 years, female 56.7
GTEX-147GR-0011-R6b-SM-5S2RO 60-69 years, male 56.5
GTEX-ZVT3-0011-R6a-SM-51MSU 60-69 years, female 56.4
GTEX-15EO6-0011-R6a-SM-7KULK 50-59 years, male 56.3
GTEX-11NV4-0011-R6a-SM-57WD5 60-69 years, male 55.8
GTEX-15DYW-0011-R6b-SM-6PALA 60-69 years, female 55.7
GTEX-1F75B-0011-R6a-SM-ARZMI 50-59 years, male 55.7
GTEX-WZTO-0011-R6B-SM-4E3J6 40-49 years, male 55.6
GTEX-ZDXO-0011-R6a-SM-4WWCT 60-69 years, male 55.3
GTEX-145LU-0011-R6a-SM-5S2V6 50-59 years, male 54.8
GTEX-1IY9M-0011-R6a-SM-D4P28 60-69 years, male 53.8
GTEX-1LVA9-0011-R6a-SM-EYYWH 50-59 years, male 53.3
GTEX-145MI-0011-R6a-SM-5PNZA 60-69 years, female 53.0
GTEX-ZXG5-0011-R6a-SM-57WBZ 60-69 years, male 53.0
GTEX-17JCI-0011-R6a-SM-72D6D 60-69 years, female 52.5
GTEX-1CB4H-0011-R6b-SM-CKZNK 60-69 years, female 52.0
GTEX-1LC47-0011-R6b-SM-EZ6MI 60-69 years, male 52.0
GTEX-15DCD-0011-R6b-SM-6M46L 70-79 years, female 51.0
GTEX-11OF3-0011-R6b-SM-57WBG 60-69 years, male 50.9
GTEX-1HT8W-0011-R6a-SM-CM2SY 30-39 years, male 49.4
GTEX-1E1VI-0011-R6a-SM-9OSVJ 50-59 years, male 49.3
GTEX-13FXS-0011-R6b-SM-5L3F7 50-59 years, male 49.2
GTEX-13S7M-0011-R6b-SM-5O9D8 60-69 years, female 48.8
GTEX-1C64N-0011-R6a-SM-7IGO9 50-59 years, male 48.8
GTEX-13JUV-0011-R6b-SM-5LZYG 40-49 years, female 48.6
GTEX-NL4W-0011-R6a-SM-2I3GA 50-59 years, male 48.4
GTEX-1MJK2-0011-R6a-SM-EXUS3 50-59 years, male 48.0
GTEX-1ICLZ-0011-R6b-SM-A9G3A 60-69 years, male 47.9
GTEX-14ABY-0011-R6a-SM-5PNWR 50-59 years, male 47.3
GTEX-WHSE-0011-R6A-SM-3P5ZP 20-29 years, male 46.7
GTEX-1A8G6-0011-R6b-SM-7P8PE 60-69 years, male 46.3
GTEX-14E7W-0011-R6b-SM-5ZZV3 70-79 years, male 45.1
GTEX-17HG3-0011-R6b-SM-79OK8 30-39 years, female 44.4
GTEX-1399T-0011-R6b-SM-5K7YL 60-69 years, male 44.3
GTEX-T6MN-0011-R6A-SM-32QP8 50-59 years, male 42.6
GTEX-1445S-0011-R6b-SM-5PNUF 60-69 years, male 42.5
GTEX-QVUS-0011-R6A-SM-3GACX 60-69 years, female 42.1
GTEX-1I1GR-0011-R6a-SM-CMKHI 60-69 years, male 41.8
GTEX-N7MS-0011-R6a-SM-2HMJ4 60-69 years, male 41.5
GTEX-13OVH-0011-R6b-SM-5LUAX 70-79 years, male 40.6
GTEX-12WSM-0011-R6b-SM-5EQ6N 60-69 years, male 40.5
GTEX-UTHO-0011-R6A-SM-3GIJW 60-69 years, male 40.5
GTEX-13O3O-0011-R6b-SM-5P9GY 60-69 years, female 39.5
GTEX-P44G-0011-R6A-SM-2XCD3 30-39 years, male 39.5
GTEX-14ASI-0011-R6a-SM-5S2UZ 60-69 years, male 38.1
GTEX-1IDJH-0011-R6a-SM-A9SLZ 70-79 years, male 38.0
GTEX-12584-0011-R6a-SM-5NQ7C 40-49 years, male 37.8
GTEX-13OW8-0011-R6b-SM-5L3I3 60-69 years, male 37.6
GTEX-13JVG-0011-R6a-SM-5MR3E 60-69 years, male 37.5
GTEX-1I1GV-0011-R6b-SM-ARU6Q 60-69 years, male 37.5
GTEX-Z93S-0011-R6b-SM-4RGNJ 50-59 years, male 37.3
GTEX-1192X-0011-R6a-SM-DNZZB 50-59 years, male 37.3
GTEX-X4XX-0011-R6B-SM-46MWP 60-69 years, male 37.2
GTEX-1GTWX-0011-R6a-SM-A96RN 60-69 years, male 37.2
GTEX-1R46S-0011-R6a-SM-EZ6N6 60-69 years, female 36.4
GTEX-QVJO-0011-R6A-SM-2S1QN 60-69 years, female 35.6
GTEX-1HGF4-0011-R6a-SM-A96S1 60-69 years, male 35.5
GTEX-13IVO-0011-R6b-SM-5K7X9 70-79 years, male 35.4
GTEX-WWYW-0011-R6A-SM-3NB3G 50-59 years, female 34.3
GTEX-1HBPM-0011-R6b-SM-ARU73 60-69 years, female 33.9
GTEX-1F7RK-0011-R6b-SM-ARZMG 20-29 years, female 33.4
GTEX-13OW6-0011-R6b-SM-5L3GR 50-59 years, male 33.3
GTEX-18A6Q-0011-R6a-SM-7LG6R 60-69 years, male 33.1
GTEX-12WSE-0011-R6b-SM-5LZV5 20-29 years, male 32.6
GTEX-12ZZY-0011-R6b-SM-5EGLA 60-69 years, male 32.6
GTEX-1F75A-0011-R6b-SM-9QEHD 50-59 years, male 32.3
GTEX-14PN4-0011-R6b-SM-69LQU 50-59 years, male 32.2
GTEX-1I19N-0011-R6b-SM-CY8GC 70-79 years, male 31.6
GTEX-12ZZX-0011-R6a-SM-5HL8L 40-49 years, female 31.5
GTEX-X585-0011-R6A-SM-46MVJ 50-59 years, male 31.4
GTEX-12ZZZ-0011-R6b-SM-5EQ5B 60-69 years, male 31.2
GTEX-13112-0011-R6b-SM-5DUVK 50-59 years, male 31.2
GTEX-1GZ4I-0011-R6b-SM-9WG77 50-59 years, male 31.0
GTEX-T5JC-0011-R6A-SM-D3L87 20-29 years, male 30.9
GTEX-13OVJ-0011-R6b-SM-5L3GH 50-59 years, female 30.4
GTEX-1GMRU-0011-R6b-SM-A9G3B 50-59 years, male 30.0
GTEX-1HBPI-0011-R6b-SM-A9G1T 50-59 years, male 29.5
GTEX-13FHO-0011-R6b-SM-5LZX1 60-69 years, male 28.7
GTEX-PWO3-0011-R6A-SM-2I5F3 60-69 years, female 28.7
GTEX-11DXY-0011-R6a-SM-DNZZF 60-69 years, male 28.7
GTEX-147F4-0011-R6b-SM-5S2UP 50-59 years, male 28.6
GTEX-11ONC-0011-R6a-SM-DO12A 60-69 years, male 28.6
GTEX-ZE9C-0011-R6a-SM-4WWCW 60-69 years, male 27.7
GTEX-1EX96-0011-R6a-SM-9OSVV 50-59 years, male 27.7
GTEX-13X6K-0011-R6a-SM-5P9K6 60-69 years, female 27.3
GTEX-13O3Q-0011-R6a-SM-5KM2V 50-59 years, male 27.1
GTEX-1GF9W-0011-R6b-SM-9QEIE 60-69 years, male 27.1
GTEX-13OVL-0011-R6a-SM-5L3G4 50-59 years, male 26.8
GTEX-ZVZQ-0011-R6b-SM-57WAY 60-69 years, female 26.8
GTEX-131XH-0011-R6a-SM-5KM2G 50-59 years, male 26.6
GTEX-144GO-0011-R6b-SM-5S2V7 60-69 years, male 26.6
GTEX-NL3H-0011-R6a-SM-2I3G8 60-69 years, male 26.4
GTEX-1MA7X-0011-R6a-SM-EYYWR 60-69 years, male 26.2
GTEX-14JG1-0011-R6b-SM-5YYAU 40-49 years, male 26.1
GTEX-1GZ2Q-0011-R6a-SM-9OSWM 40-49 years, male 25.7
GTEX-1H1DG-0011-R6a-SM-A9SK8 70-79 years, male 25.4
GTEX-1LVAO-0011-R6b-SM-EZ6MX 60-69 years, male 25.4
GTEX-17EVQ-0011-R6a-SM-7189U 70-79 years, male 25.1
GTEX-14LZ3-0011-R6a-SM-D3L8C 60-69 years, female 25.1
GTEX-1F6IF-0011-R6a-SM-9QEIO 60-69 years, male 25.0
GTEX-1GMR8-0011-R6b-SM-CE6RC 50-59 years, female 24.8
GTEX-12WSF-0011-R6b-SM-5HL8W 70-79 years, male 24.5
GTEX-14753-0011-R6b-SM-5S2UD 60-69 years, male 24.5
GTEX-1EKGG-0011-R6a-SM-CL538 60-69 years, male 24.2
GTEX-1H1ZS-0011-R6b-SM-A9G1F 70-79 years, male 24.2
GTEX-QMR6-0011-R6A-SM-32PKP 50-59 years, male 23.7
GTEX-1H1CY-0011-R6b-SM-CE6RP 60-69 years, female 23.6
GTEX-1HBPH-0011-R6a-SM-CKZOV 40-49 years, female 23.4
GTEX-17MF6-0011-R6b-SM-7LG6G 40-49 years, male 23.1
GTEX-139TT-0011-R6b-SM-5J2ON 60-69 years, male 22.8
GTEX-14JIY-0011-R6b-SM-68714 60-69 years, male 22.8
GTEX-T2IS-0011-R6A-SM-32QP2 20-29 years, female 22.8
GTEX-1GF9V-0011-R6b-SM-CJI2Q 60-69 years, male 22.8
GTEX-145MH-0011-R6a-SM-5PNZ7 50-59 years, male 22.5
GTEX-12WSD-0011-R6b-SM-5P9JU 60-69 years, female 22.4
GTEX-13FLW-0011-R6b-SM-5L3EN 50-59 years, male 22.2
GTEX-X4EP-0011-R6A-SM-3P629 60-69 years, female 22.2
GTEX-OHPN-0011-R6A-SM-2I5FH 60-69 years, female 22.0
GTEX-NPJ7-0011-R6a-SM-2I3G7 60-69 years, female 21.8
GTEX-1B8SF-0011-R6b-SM-7MXUD 60-69 years, male 21.7
GTEX-1CB4G-0011-R6b-SM-9QEGO 60-69 years, male 21.7
GTEX-14C5O-0011-R6a-SM-5YYB6 60-69 years, male 21.3
GTEX-1EH9U-0011-R6a-SM-CJI2C 60-69 years, male 20.7
GTEX-183WM-0011-R6b-SM-72D66 70-79 years, female 20.6
GTEX-145LS-0011-R6b-SM-5PNWL 60-69 years, female 20.3
GTEX-1GN73-0011-R6b-SM-CJI2T 60-69 years, male 19.3
GTEX-1AX9I-0011-R6a-SM-7P8PK 60-69 years, male 19.0
GTEX-12WSC-0011-R6b-SM-5LU99 50-59 years, male 18.9
GTEX-17EVP-0011-R6b-SM-7LT99 40-49 years, male 18.9
GTEX-13OW5-0011-R6b-SM-5O9BW 60-69 years, male 18.6
GTEX-NPJ8-0011-R6a-SM-2HMKB 40-49 years, male 18.6
GTEX-13QJC-0011-R6a-SM-5S2VI 60-69 years, female 18.5
GTEX-14BMV-0011-R6b-SM-5YY9I 50-59 years, male 18.5
GTEX-1J1OQ-0011-R6a-SM-ARU86 40-49 years, female 18.5
GTEX-1H3NZ-0011-R6b-SM-A9G1N 60-69 years, male 18.3
GTEX-13FLV-0011-R6a-SM-5KLZ4 50-59 years, male 18.0
GTEX-17F97-0011-R6a-SM-7EPGS 50-59 years, male 18.0
GTEX-1B933-0011-R6b-SM-79OOQ 50-59 years, female 18.0
GTEX-13SLW-0011-R6a-SM-5O9BH 70-79 years, male 17.8
GTEX-13X6J-0011-R6a-SM-5PNUB 50-59 years, male 17.2
GTEX-1EMGI-0011-R6a-SM-9OSVR 60-69 years, male 17.2
GTEX-14PJM-0011-R6a-SM-6872G 50-59 years, female 16.9
GTEX-13N2G-0011-R6b-SM-5MR3P 60-69 years, male 16.7
GTEX-144GL-0011-R6a-SM-5P9HW 50-59 years, male 16.4
GTEX-16YQH-0011-R6b-SM-7938T 30-39 years, male 16.4
GTEX-XMD1-0011-R6A-SM-4AT5K 60-69 years, male 16.4
GTEX-1HB9E-0011-R6b-SM-A9G1P 50-59 years, male 16.2
GTEX-1I1CD-0011-R6b-SM-CJI3Y 60-69 years, female 16.2
GTEX-12WSH-0011-R6b-SM-5P9F4 50-59 years, male 16.1
GTEX-1HUB1-0011-R6b-SM-ARU6W 60-69 years, male 15.7
GTEX-11DZ1-0011-R6b-SM-DNZZG 50-59 years, male 15.6
GTEX-1CB4J-0011-R6b-SM-9WG7B 60-69 years, male 15.5
GTEX-1OJC4-0011-R6a-SM-EXOIM 50-59 years, female 15.5
GTEX-13VXU-0011-R6a-SM-5SI71 50-59 years, male 15.1
GTEX-1313W-0011-R6a-SM-5K7XO 50-59 years, female 15.0
GTEX-132Q8-0011-R6a-SM-5K7YN 60-69 years, male 14.8
GTEX-15RJE-0011-R6a-SM-7DHL8 40-49 years, male 14.8
GTEX-18464-0011-R6a-SM-731CA 50-59 years, male 14.6
GTEX-15ER7-0011-R6a-SM-6M46M 20-29 years, female 14.5
GTEX-1C6VR-0011-R6a-SM-7MXU8 60-69 years, male 14.3
GTEX-1GN1U-0011-R6a-SM-CKZNO 50-59 years, female 14.0
GTEX-14BIM-0011-R6b-SM-5S2VB 60-69 years, female 13.9
GTEX-TSE9-0011-R6A-SM-3DB7L 60-69 years, female 13.8
GTEX-1HR9M-0011-R6a-SM-ARU6Z 60-69 years, male 13.2
GTEX-1B8L1-0011-R6b-SM-7P8SU 60-69 years, male 13.1
GTEX-1A3MX-0011-R6a-SM-7P8S9 60-69 years, male 12.8
GTEX-1F6I4-0011-R6a-SM-CE6R4 60-69 years, male 12.8
GTEX-13NYS-0011-R6b-SM-5MR3R 60-69 years, male 12.3
GTEX-1B996-0011-R6b-SM-793AQ 60-69 years, male 12.1
GTEX-1JMLX-0011-R6b-SM-EXUT9 50-59 years, male 12.1
GTEX-13RTJ-0011-R6a-SM-5SI74 60-69 years, male 11.9
GTEX-1BAJH-0011-R6b-SM-7MXT2 70-79 years, male 11.7
GTEX-15CHQ-0011-R6b-SM-69LOX 60-69 years, male 11.4
GTEX-XLM4-0011-R6A-SM-4AT4B 60-69 years, male 11.2
GTEX-14PQA-0011-R6b-SM-6AJAM 50-59 years, female 11.0
GTEX-1F75W-0011-R6a-SM-9QEI5 60-69 years, male 10.1
GTEX-1LH75-0011-R6a-SM-EXURS 50-59 years, female 9.7
GTEX-14BIN-0011-R6a-SM-5S2RH 50-59 years, female 8.6
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Brain - Putamen (basal ganglia)
Average nTPM: 117.0
Samples: 205

Max nTPM: 345.0
Min nTPM: 28.0
Std nTPM: 57.9
Median nTPM: 112.5
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 345.0
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 315.1
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 298.8
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 279.5
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 277.6
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 266.3
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 261.3
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 256.1
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 235.1
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 215.2
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 210.2
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 205.0
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 205.0
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 201.5
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 201.4
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 198.4
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 192.2
GTEX-N7MS-0011-R7a-SM-2HMKN 60-69 years, male 190.2
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 189.9
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 189.7
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 188.0
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 184.9
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 182.9
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 182.6
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 180.7
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 180.1
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 180.1
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 176.8
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 176.2
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 173.2
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 173.1
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 173.1
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 172.5
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 171.8
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 171.2
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 169.8
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 167.2
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 166.4
GTEX-NPJ8-0011-R7a-SM-2HMJV 40-49 years, male 165.5
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 165.0
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 164.6
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 161.0
GTEX-RU72-0011-R7A-SM-2TF5U 50-59 years, female 159.7
GTEX-NL3H-0011-R7a-SM-2I3G5 60-69 years, male 159.6
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 158.4
GTEX-18464-0011-R7b-SM-731CM 50-59 years, male 149.8
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 149.4
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 148.8
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 147.8
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 147.6
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 145.9
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 145.5
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 144.9
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 144.0
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 142.9
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 142.4
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 141.7
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 141.0
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 141.0
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 140.6
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 138.9
GTEX-R55E-0011-R7A-SM-2TC5Z 20-29 years, male 138.5
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 138.1
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 137.1
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 135.0
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 134.4
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 131.0
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 131.0
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 130.3
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 130.2
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 129.2
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 129.0
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 128.8
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 127.6
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 127.6
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 127.2
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 127.0
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 126.7
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 126.2
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 126.1
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 125.6
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 124.6
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 124.2
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 123.4
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 123.4
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 123.3
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 123.2
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 122.0
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 120.5
GTEX-P44G-0011-R7A-SM-2I3F9 30-39 years, male 120.1
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 119.6
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 119.3
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 119.0
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 116.9
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 116.0
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 115.8
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 115.5
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 114.4
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 113.5
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 113.3
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 113.2
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 112.6
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 112.5
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 111.5
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 111.5
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 111.4
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 111.0
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 109.7
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 109.2
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 109.1
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 108.6
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 108.4
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 107.3
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 106.8
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 106.7
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 104.7
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 104.1
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 104.0
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 103.5
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 102.8
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 102.8
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 102.4
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 102.0
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 97.3
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 97.0
GTEX-1IOXB-0011-R7b-SM-CE6SM 50-59 years, male 97.0
GTEX-TSE9-0011-R7A-SM-3DB7P 60-69 years, female 96.4
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 95.8
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 95.4
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 94.3
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 94.0
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 93.9
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 92.4
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 92.1
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 91.6
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 91.2
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 89.4
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 88.8
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 88.2
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 86.8
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 86.1
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 82.9
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 82.3
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 81.5
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 80.5
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 79.9
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 78.9
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 77.1
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 76.1
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 75.5
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 75.0
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 74.7
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 74.6
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 73.8
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 73.0
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 72.8
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 72.7
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 72.3
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 70.9
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 69.0
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 68.9
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 68.6
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 67.5
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 65.5
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 64.0
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 62.8
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 62.5
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 62.3
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 60.6
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 60.2
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 57.5
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 57.4
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 55.7
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 55.7
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 55.0
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 54.7
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 53.5
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 53.2
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 52.9
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 52.4
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 51.8
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 49.5
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 48.8
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 45.9
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 45.8
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 45.1
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 43.9
GTEX-QVJO-0011-R7A-SM-2S1QO 60-69 years, female 43.4
GTEX-1J1OQ-0011-R7b-SM-ARU87 40-49 years, female 42.7
GTEX-OHPN-0011-R7A-SM-2I5FI 60-69 years, female 42.6
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 42.4
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 41.3
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 41.2
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 41.1
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 39.6
GTEX-S7SE-0011-R7A-SM-2XCDI 50-59 years, male 38.6
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 36.7
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 36.5
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 32.4
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 32.0
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 31.5
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 28.4
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 28.4
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 28.4
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 28.0
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BASAL GANGLIA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

372.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 90.7
FF:10164-103B2 76 years, female 90.7
Nucleus accumbens
Scaled Tags Per Million: 163.5
FF:10037-101F1 23-56 years, mixed 163.5
Putamen
Scaled Tags Per Million: 76.7
FF:10176-103C5 60 years, female 76.7
Globus pallidus
Scaled Tags Per Million: 372.8
FF:10175-103C4 60 years, female 399.4
FF:10161-103A8 76 years, female 346.3

BASAL GANGLIA - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

141.4
Pig sample Sample description nTPM
Caudate
nTPM: 67.8
Samples: 4

Max nTPM: 75.7
Min nTPM: 58.0
Sample A Female 58.0
Sample B Female 63.6
Sample C Male 75.7
Sample D Male 73.9
Putamen
nTPM: 141.4
Samples: 4

Max nTPM: 208.6
Min nTPM: 82.1
Sample A Female 208.6
Sample B Female 82.1
Sample C Male 94.4
Sample D Male 180.4
Septum
nTPM: 97.3
Samples: 4

Max nTPM: 131.2
Min nTPM: 80.5
Sample A Female 90.0
Sample B Female 80.5
Sample C Male 87.4
Sample D Male 131.2
Ventral pallidum
nTPM: 133.1
Samples: 4

Max nTPM: 191.9
Min nTPM: 61.4
Sample A Female 61.4
Sample B Female 107.0
Sample C Male 172.0
Sample D Male 191.9

BASAL GANGLIA - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

7.8
Mouse sample Sample description nTPM
Caudate putamen
nTPM: 7.8
Samples: 4

Max nTPM: 9.3
Min nTPM: 6.9
Sample A Male 7.8
Sample B Male 7.3
Sample C Female 6.9
Sample D Female 9.3
Septum
nTPM: 7.5
Samples: 4

Max nTPM: 8.5
Min nTPM: 6.0
Sample A Male 7.5
Sample B Male 7.8
Sample C Female 8.5
Sample D Female 6.0
Ventral forebrain
nTPM: 5.5
Samples: 4

Max nTPM: 6.5
Min nTPM: 4.8
Sample A Male 5.4
Sample B Male 6.5
Sample C Female 4.8
Sample D Female 5.2

BASAL GANGLIA - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

5.5
Allen experiment id Experiment description Expression energy
Striatum
Expression energy: 4.9
74511880 Antisense, RP_051121_04_A01, Mouse strain C57BL/6J (56 days, male) 6.6
68667288 Antisense, RP_050201_02_A02, Mouse strain C57BL/6J (56 days, male) 3.1
Pallidum
Expression energy: 5.5
74511880 Antisense, RP_051121_04_A01, Mouse strain C57BL/6J (56 days, male) 7.9
68667288 Antisense, RP_050201_02_A02, Mouse strain C57BL/6J (56 days, male) 3.1

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