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BRAIN BASAL GANGLIA Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS MEDULLA OBLONGATA
MIDBRAIN OLFACTORY BULB PITUITARY GLAND PONS RETINA SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
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VALIDATION
Brain proteome
Basal ganglia
BASAL GANGLIA - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glial cells: Medium
Neuronal cells: Medium
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:73.4 nTPM
HPA Brain:31.2 nTPM
GTEx:73.4 nTPM
FANTOM5:57.8 Scaled Tags Per Million
Pig:58.5 nTPM
Mouse:113.4 nTPM
Allen mouse:1.0 Expression energy

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA028956
Glial cells Medium
Neuronal cells Medium



BASAL GANGLIA - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

31.2
Sample id Sample description nTPM
Caudate nucleus
nTPM: 23.7
1857 Female, age 85, left hemisphere 27.6
2481 Female, age 94, left hemisphere 27.5
2290 Female, age 72, unknown 24.3
2288 Male, age 75, left hemisphere 23.3
2846 Female, age 79, unknown 22.9
2289 Male, age 61, right hemisphere 22.8
1854 Male, age 80, left hemisphere 21.4
1781 Male, age 74, unknown 19.6
Globus pallidus, externus
nTPM: 17.8
2772 Female, age 79, unknown 22.6
1996 Male, age 80, right hemisphere 21.4
2395 Male, age 75, both hemispheres 21.3
2646 Male, age 61, right hemisphere 13.2
2567 Female, age 72, unknown 10.3
Globus pallidus, internus
nTPM: 18.1
2483 Female, age 94, right hemisphere 24.8
2287 Male, age 75, right hemisphere 21.3
1818 Male, age 74, unknown 19.2
2037 Male, age 80, right hemisphere 18.4
2778 Female, age 91, both hemispheres 18.3
2566 Female, age 72, unknown 12.8
2111 Female, age 85, right hemisphere 11.6
Nucleus accumbens
nTPM: 25.6
2732 Male, age 80, right hemisphere 38.9
1856 Female, age 91, right hemisphere 29.3
2698 Female, age 72, unknown 25.7
2286 Male, age 75, left hemisphere 25.5
1806 Female, age 85, left hemisphere 24.4
1783 Male, age 74, unknown 22.0
2824 Male, age 61, right hemisphere 20.2
2391 Female, age 94, left hemisphere 18.8
Nucleus basalis of Meynert
nTPM: 17.7
2393 Male, age 80, right hemisphere 21.0
2821 Male, age 75, both hemispheres 18.9
2484 Female, age 94, left hemisphere 16.8
2569 Male, age 61, both hemispheres 14.0
Nucleus of the diagonal band
nTPM: 27.9
1812 Female, age 91, both hemispheres 34.5
1979 Male, age 74, unknown 31.6
2775 Male, age 80, right hemisphere 26.4
2195 Female, age 85, both hemispheres 24.8
2029 Male, age 61, right hemisphere 22.1
Putamen
nTPM: 20.4
2482 Female, age 94, left hemisphere 23.7
1937 Female, age 91, right hemisphere 23.4
1838 Male, age 80, right hemisphere 22.5
1829 Male, age 74, unknown 20.9
2466 Female, age 79, unknown 20.8
2647 Male, age 75, left hemisphere 16.1
2489 Female, age 72, unknown 15.5
Septal nuclei
nTPM: 31.2
2629 Female, age 94, right hemisphere 46.6
2009 Female, age 91, both hemispheres 40.8
2199 Male, age 80, right hemisphere 35.9
2031 Female, age 72, unknown 28.1
1960 Male, age 74, unknown 26.8
2059 Female, age 85, both hemispheres 22.3
2394 Male, age 61, left hemisphere 17.5
Stria terminalis, bed nucleus
nTPM: 24.3
1974 Female, age 91, both hemispheres 25.3
2486 Female, age 94, both hemispheres 25.1
2201 Male, age 74, unknown 22.5

BASAL GANGLIA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

73.4
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 68.1
Samples: 246

Max nTPM: 207.9
Min nTPM: 35.0
Std nTPM: 28.9
Median nTPM: 59.7
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 207.9
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 198.4
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 197.4
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 178.4
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 171.0
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 166.1
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 158.6
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 155.1
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 154.9
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 153.1
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 146.2
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 142.6
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 131.2
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 131.0
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 121.2
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 116.4
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 111.6
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 108.0
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 101.7
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 100.9
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 99.9
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 99.9
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 98.2
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 98.2
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 97.1
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 96.6
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 96.2
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 94.9
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 94.5
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 93.8
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 92.4
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 92.0
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 91.5
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 90.3
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 90.0
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 87.9
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 87.0
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 86.2
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 85.4
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 85.3
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 84.3
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 82.6
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 82.3
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 82.2
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 81.9
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 81.5
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 80.9
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 80.9
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 80.6
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 80.1
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 78.7
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 78.3
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 78.0
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 77.6
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 76.4
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 76.3
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 76.3
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 75.4
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 75.1
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 75.0
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 74.9
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 74.6
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 72.9
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 72.9
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 72.7
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 72.3
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 72.1
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 71.7
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 71.2
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 71.1
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 71.0
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 70.7
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 70.2
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 70.0
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 69.8
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 69.7
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 69.6
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 69.5
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 69.4
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 69.4
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 69.3
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 69.2
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 69.0
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 68.2
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 68.0
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 67.7
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 67.3
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 67.2
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 67.1
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 66.9
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 66.7
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 66.7
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 66.6
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 66.4
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 66.0
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 65.9
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 65.4
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 65.3
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 64.5
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 64.3
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 63.8
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 63.7
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 63.7
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 63.6
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 63.5
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 63.2
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 63.0
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 62.7
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 62.0
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 61.7
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 61.2
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 61.0
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 60.9
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 60.8
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 60.7
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 60.7
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 60.7
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 60.5
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 60.5
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 60.0
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 59.9
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 59.8
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 59.8
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 59.6
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 59.6
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 59.4
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 59.2
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 58.9
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 58.4
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 58.3
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 58.2
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 58.1
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 58.0
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 57.8
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 57.8
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 57.6
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 57.6
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 57.3
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 57.2
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 57.2
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 57.0
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 56.9
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 56.7
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 56.7
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 56.6
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 56.4
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 56.4
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 56.3
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 55.9
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 55.8
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 55.5
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 55.4
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 55.4
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 55.3
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 55.1
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 55.0
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 54.5
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 54.4
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 54.2
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 54.2
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 54.1
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 53.5
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 53.3
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 53.1
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 53.0
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 52.9
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 52.9
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 52.8
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 52.4
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 52.2
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 52.1
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 52.1
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 51.9
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 51.8
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 51.5
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 51.5
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 51.0
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 50.9
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 50.9
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 50.8
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 50.8
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 50.7
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 50.5
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 50.2
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 50.2
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 50.1
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 50.0
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 50.0
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 49.9
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 49.6
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 49.4
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 49.0
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 49.0
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 49.0
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 49.0
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 48.9
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 48.8
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 48.8
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 48.6
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 48.6
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 48.5
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 48.0
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 47.8
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 47.8
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 47.8
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 47.6
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 47.4
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 47.3
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 47.2
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 47.0
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 46.9
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 46.8
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 46.6
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 46.5
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 46.4
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 46.1
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 46.1
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 45.9
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 45.7
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 45.7
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 45.6
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 45.4
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 44.8
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 44.7
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 44.7
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 44.3
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 44.1
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 44.0
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 43.9
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 43.8
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 43.6
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 43.5
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 43.4
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 43.2
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 43.0
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 42.5
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 42.1
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 42.0
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 40.0
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 39.3
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 39.2
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 38.8
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 38.6
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 38.6
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 37.1
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 35.0
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Brain - Nucleus accumbens (basal ganglia)
Average nTPM: 73.4
Samples: 246

Max nTPM: 261.2
Min nTPM: 28.0
Std nTPM: 24.9
Median nTPM: 70.4
GTEX-P44H-0011-R6A-SM-2XCF3 40-49 years, male 261.2
GTEX-OHPN-0011-R6A-SM-2I5FH 60-69 years, female 192.5
GTEX-1GZHY-0011-R6a-SM-9OSWL 50-59 years, female 173.2
GTEX-T5JC-0011-R6A-SM-D3L87 20-29 years, male 168.9
GTEX-14PHW-0011-R6b-SM-5YYAR 60-69 years, female 166.1
GTEX-183WM-0011-R6b-SM-72D66 70-79 years, female 158.6
GTEX-14753-0011-R6b-SM-5S2UD 60-69 years, male 137.3
GTEX-147F4-0011-R6b-SM-5S2UP 50-59 years, male 134.8
GTEX-1EH9U-0011-R6a-SM-CJI2C 60-69 years, male 133.3
GTEX-PWO3-0011-R6A-SM-2I5F3 60-69 years, female 130.9
GTEX-YJ89-0011-R6a-SM-4V6GN 60-69 years, male 130.8
GTEX-1EKGG-0011-R6a-SM-CL538 60-69 years, male 124.8
GTEX-13OVH-0011-R6b-SM-5LUAX 70-79 years, male 123.2
GTEX-P44G-0011-R6A-SM-2XCD3 30-39 years, male 116.6
GTEX-Z93S-0011-R6b-SM-4RGNJ 50-59 years, male 113.0
GTEX-1LVAO-0011-R6b-SM-EZ6MX 60-69 years, male 100.4
GTEX-1C6VR-0011-R6a-SM-7MXU8 60-69 years, male 96.7
GTEX-1H3O1-0011-R6b-SM-CL54U 60-69 years, male 93.8
GTEX-1F75W-0011-R6a-SM-9QEI5 60-69 years, male 93.6
GTEX-1C64N-0011-R6a-SM-7IGO9 50-59 years, male 93.0
GTEX-1RLM8-0011-R6a-SM-EYYXS 50-59 years, male 92.9
GTEX-1LVA9-0011-R6a-SM-EYYWH 50-59 years, male 90.8
GTEX-1HBPH-0011-R6a-SM-CKZOV 40-49 years, female 89.2
GTEX-1OJC4-0011-R6a-SM-EXOIM 50-59 years, female 88.9
GTEX-S7SE-0011-R6A-SM-2XCD9 50-59 years, male 88.7
GTEX-1HUB1-0011-R6b-SM-ARU6W 60-69 years, male 88.4
GTEX-1GMR8-0011-R6b-SM-CE6RC 50-59 years, female 88.0
GTEX-1BAJH-0011-R6b-SM-7MXT2 70-79 years, male 87.9
GTEX-1IGQW-0011-R6a-SM-CM2TC 60-69 years, male 87.9
GTEX-1N2DW-0011-R6a-SM-EZ6MW 50-59 years, male 87.6
GTEX-1A3MX-0011-R6a-SM-7P8S9 60-69 years, male 87.5
GTEX-1J8Q2-0011-R6a-SM-CKZPG 60-69 years, male 87.4
GTEX-11DZ1-0011-R6b-SM-DNZZG 50-59 years, male 86.2
GTEX-1MA7X-0011-R6a-SM-EYYWR 60-69 years, male 86.1
GTEX-13FLV-0011-R6a-SM-5KLZ4 50-59 years, male 85.4
GTEX-ZV68-0011-R6a-SM-51MSR 50-59 years, female 85.2
GTEX-12WSC-0011-R6b-SM-5LU99 50-59 years, male 84.7
GTEX-14BIN-0011-R6a-SM-5S2RH 50-59 years, female 84.4
GTEX-12WSH-0011-R6b-SM-5P9F4 50-59 years, male 84.2
GTEX-ZE7O-0011-R6a-SM-57WCI 50-59 years, female 83.6
GTEX-1F6I4-0011-R6a-SM-CE6R4 60-69 years, male 83.5
GTEX-NPJ8-0011-R6a-SM-2HMKB 40-49 years, male 83.3
GTEX-13SLW-0011-R6a-SM-5O9BH 70-79 years, male 82.9
GTEX-132Q8-0011-R6a-SM-5K7YN 60-69 years, male 82.3
GTEX-11NV4-0011-R6a-SM-57WD5 60-69 years, male 82.0
GTEX-139TT-0011-R6b-SM-5J2ON 60-69 years, male 81.8
GTEX-1IY9M-0011-R6a-SM-D4P28 60-69 years, male 81.8
GTEX-1LH75-0011-R6a-SM-EXURS 50-59 years, female 81.6
GTEX-12WSF-0011-R6b-SM-5HL8W 70-79 years, male 81.5
GTEX-1LC47-0011-R6b-SM-EZ6MI 60-69 years, male 81.3
GTEX-18464-0011-R6a-SM-731CA 50-59 years, male 81.2
GTEX-1B8L1-0011-R6b-SM-7P8SU 60-69 years, male 81.2
GTEX-14JIY-0011-R6b-SM-68714 60-69 years, male 81.1
GTEX-1AX9I-0011-R6a-SM-7P8PK 60-69 years, male 81.0
GTEX-1A8G6-0011-R6b-SM-7P8PE 60-69 years, male 80.7
GTEX-18A6Q-0011-R6a-SM-7LG6R 60-69 years, male 80.4
GTEX-1F88E-0011-R6a-SM-CKZNW 60-69 years, female 79.4
GTEX-ZE9C-0011-R6a-SM-4WWCW 60-69 years, male 79.1
GTEX-13X6J-0011-R6a-SM-5PNUB 50-59 years, male 79.0
GTEX-1GMRU-0011-R6b-SM-A9G3B 50-59 years, male 78.8
GTEX-1HR9M-0011-R6a-SM-ARU6Z 60-69 years, male 78.8
GTEX-T6MN-0011-R6A-SM-32QP8 50-59 years, male 78.5
GTEX-1GF9V-0011-R6b-SM-CJI2Q 60-69 years, male 78.4
GTEX-14E7W-0011-R6b-SM-5ZZV3 70-79 years, male 78.0
GTEX-11DXW-0011-R6a-SM-DO11N 40-49 years, male 78.0
GTEX-1H3VE-0011-R6b-SM-A9G1M 40-49 years, male 77.9
GTEX-1192X-0011-R6a-SM-DNZZB 50-59 years, male 77.8
GTEX-1GF9W-0011-R6b-SM-9QEIE 60-69 years, male 77.8
GTEX-12WSD-0011-R6b-SM-5P9JU 60-69 years, female 77.3
GTEX-ZF28-0011-R6a-SM-4WKHI 60-69 years, male 77.3
GTEX-1GN2E-0011-R6b-SM-9QEII 60-69 years, male 77.1
GTEX-12WSE-0011-R6b-SM-5LZV5 20-29 years, male 76.9
GTEX-12ZZZ-0011-R6b-SM-5EQ5B 60-69 years, male 76.7
GTEX-1GZ4I-0011-R6b-SM-9WG77 50-59 years, male 76.7
GTEX-12584-0011-R6a-SM-5NQ7C 40-49 years, male 76.5
GTEX-TSE9-0011-R6A-SM-3DB7L 60-69 years, female 76.3
GTEX-145MH-0011-R6a-SM-5PNZ7 50-59 years, male 76.1
GTEX-ZVT3-0011-R6a-SM-51MSU 60-69 years, female 76.1
GTEX-1EX96-0011-R6a-SM-9OSVV 50-59 years, male 76.1
GTEX-13FHO-0011-R6b-SM-5LZX1 60-69 years, male 75.9
GTEX-UTHO-0011-R6A-SM-3GIJW 60-69 years, male 75.9
GTEX-1GN1U-0011-R6a-SM-CKZNO 50-59 years, female 75.9
GTEX-17EVQ-0011-R6a-SM-7189U 70-79 years, male 75.8
GTEX-1JMLX-0011-R6b-SM-EXUT9 50-59 years, male 75.4
GTEX-17MF6-0011-R6b-SM-7LG6G 40-49 years, male 75.3
GTEX-1H1CY-0011-R6b-SM-CE6RP 60-69 years, female 75.1
GTEX-1H1DG-0011-R6a-SM-A9SK8 70-79 years, male 75.1
GTEX-1JJEA-0011-R6a-SM-EXUS1 60-69 years, male 75.1
GTEX-13JVG-0011-R6a-SM-5MR3E 60-69 years, male 75.0
GTEX-1LB8K-0011-R6a-SM-EXURT 50-59 years, male 75.0
GTEX-1CB4G-0011-R6b-SM-9QEGO 60-69 years, male 74.9
GTEX-1R46S-0011-R6a-SM-EZ6N6 60-69 years, female 74.9
GTEX-144GO-0011-R6b-SM-5S2V7 60-69 years, male 74.5
GTEX-15EO6-0011-R6a-SM-7KULK 50-59 years, male 74.5
GTEX-1CB4H-0011-R6b-SM-CKZNK 60-69 years, female 74.2
GTEX-11NUK-0011-R6a-SM-DO93O 50-59 years, male 74.1
GTEX-T2IS-0011-R6A-SM-32QP2 20-29 years, female 74.0
GTEX-1F75A-0011-R6b-SM-9QEHD 50-59 years, male 74.0
GTEX-X4XY-0011-R6B-SM-46MVB 60-69 years, male 73.8
GTEX-1I1GR-0011-R6a-SM-CMKHI 60-69 years, male 73.7
GTEX-1EMGI-0011-R6a-SM-9OSVR 60-69 years, male 73.5
GTEX-X261-0011-R6B-SM-4E3J8 50-59 years, male 73.0
GTEX-1GZ2Q-0011-R6a-SM-9OSWM 40-49 years, male 73.0
GTEX-14PQA-0011-R6b-SM-6AJAM 50-59 years, female 72.9
GTEX-QMR6-0011-R6A-SM-32PKP 50-59 years, male 72.8
GTEX-1B8SF-0011-R6b-SM-7MXUD 60-69 years, male 72.4
GTEX-17JCI-0011-R6a-SM-72D6D 60-69 years, female 72.3
GTEX-11ONC-0011-R6a-SM-DO12A 60-69 years, male 72.3
GTEX-12ZZW-0011-R6a-SM-5DUVZ 50-59 years, male 71.8
GTEX-X585-0011-R6A-SM-46MVJ 50-59 years, male 71.8
GTEX-16XZZ-0011-R6a-SM-7IGNE 60-69 years, male 71.5
GTEX-1MJK2-0011-R6a-SM-EXUS3 50-59 years, male 71.5
GTEX-11GSP-0011-R6b-SM-57WBQ 60-69 years, female 71.4
GTEX-17F97-0011-R6a-SM-7EPGS 50-59 years, male 71.4
GTEX-13FLW-0011-R6b-SM-5L3EN 50-59 years, male 71.3
GTEX-1445S-0011-R6b-SM-5PNUF 60-69 years, male 71.3
GTEX-145MI-0011-R6a-SM-5PNZA 60-69 years, female 71.3
GTEX-13FHP-0011-R6b-SM-5LZY6 50-59 years, male 71.2
GTEX-13QJC-0011-R6a-SM-5S2VI 60-69 years, female 71.1
GTEX-12ZZX-0011-R6a-SM-5HL8L 40-49 years, female 70.9
GTEX-11TTK-0011-R6b-SM-DNZZW 60-69 years, female 70.9
GTEX-11OF3-0011-R6b-SM-57WBG 60-69 years, male 70.5
GTEX-17HG3-0011-R6b-SM-79OK8 30-39 years, female 70.4
GTEX-1EWIQ-0011-R6a-SM-ARU8G 70-79 years, female 70.4
GTEX-11WQC-0011-R6a-SM-5BC77 60-69 years, male 70.2
GTEX-13G51-0011-R6b-SM-5LZX4 60-69 years, male 70.2
GTEX-14PJM-0011-R6a-SM-6872G 50-59 years, female 70.2
GTEX-XMD1-0011-R6A-SM-4AT5K 60-69 years, male 70.1
GTEX-1E1VI-0011-R6a-SM-9OSVJ 50-59 years, male 70.0
GTEX-14BIM-0011-R6b-SM-5S2VB 60-69 years, female 69.9
GTEX-145LS-0011-R6b-SM-5PNWL 60-69 years, female 69.7
GTEX-ZDXO-0011-R6a-SM-4WWCT 60-69 years, male 69.4
GTEX-13OW8-0011-R6b-SM-5L3I3 60-69 years, male 69.0
GTEX-1HBPM-0011-R6b-SM-ARU73 60-69 years, female 68.9
GTEX-13O3Q-0011-R6a-SM-5KM2V 50-59 years, male 68.3
GTEX-17EVP-0011-R6b-SM-7LT99 40-49 years, male 68.3
GTEX-1HT8W-0011-R6a-SM-CM2SY 30-39 years, male 68.3
GTEX-145LU-0011-R6a-SM-5S2V6 50-59 years, male 68.2
GTEX-13112-0011-R6b-SM-5DUVK 50-59 years, male 67.2
GTEX-14ASI-0011-R6a-SM-5S2UZ 60-69 years, male 67.1
GTEX-11PRG-0011-R6b-SM-DO923 50-59 years, male 67.1
GTEX-12WSM-0011-R6b-SM-5EQ6N 60-69 years, male 67.0
GTEX-15ER7-0011-R6a-SM-6M46M 20-29 years, female 67.0
GTEX-11DXY-0011-R6a-SM-DNZZF 60-69 years, male 66.7
GTEX-15CHQ-0011-R6b-SM-69LOX 60-69 years, male 66.6
GTEX-11O72-0011-R6a-SM-DNZZQ 40-49 years, male 66.6
GTEX-1IDJH-0011-R6a-SM-A9SLZ 70-79 years, male 66.6
GTEX-1F7RK-0011-R6b-SM-ARZMG 20-29 years, female 66.5
GTEX-139TS-0011-R6a-SM-5J2OB 60-69 years, male 66.4
GTEX-QVUS-0011-R6A-SM-3GACX 60-69 years, female 66.4
GTEX-S7PM-0011-R6A-SM-3NM8F 60-69 years, male 66.4
GTEX-1EN7A-0011-R6b-SM-9QEHW 40-49 years, male 66.3
GTEX-1I19N-0011-R6b-SM-CY8GC 70-79 years, male 66.3
GTEX-1H4P4-0011-R6a-SM-ARZLR 50-59 years, male 65.9
GTEX-1C6WA-0011-R6a-SM-7PBYP 60-69 years, male 65.6
GTEX-1H3NZ-0011-R6b-SM-A9G1N 60-69 years, male 65.5
GTEX-13VXU-0011-R6a-SM-5SI71 50-59 years, male 65.2
GTEX-1F75B-0011-R6a-SM-ARZMI 50-59 years, male 65.1
GTEX-13PL6-0011-R6a-SM-5O9C5 40-49 years, female 64.8
GTEX-XLM4-0011-R6A-SM-4AT4B 60-69 years, male 64.8
GTEX-13RTJ-0011-R6a-SM-5SI74 60-69 years, male 64.7
GTEX-1I1GQ-0011-R6b-SM-CE6SE 50-59 years, male 64.5
GTEX-144GL-0011-R6a-SM-5P9HW 50-59 years, male 64.4
GTEX-131XH-0011-R6a-SM-5KM2G 50-59 years, male 64.3
GTEX-1IKK5-0011-R6b-SM-A9SLY 60-69 years, male 64.3
GTEX-13NYS-0011-R6b-SM-5MR3R 60-69 years, male 64.2
GTEX-147GR-0011-R6b-SM-5S2RO 60-69 years, male 63.7
GTEX-1IKOH-0011-R6b-SM-A9G1W 60-69 years, female 63.6
GTEX-11DYG-0011-R6a-SM-DO936 60-69 years, male 63.4
GTEX-1I1CD-0011-R6b-SM-CJI3Y 60-69 years, female 63.3
GTEX-1399T-0011-R6b-SM-5K7YL 60-69 years, male 63.0
GTEX-ZVZQ-0011-R6b-SM-57WAY 60-69 years, female 63.0
GTEX-1313W-0011-R6a-SM-5K7XO 50-59 years, female 62.9
GTEX-1F6IF-0011-R6a-SM-9QEIO 60-69 years, male 62.9
GTEX-131XW-0011-R6b-SM-5K7XY 50-59 years, female 62.7
GTEX-14LZ3-0011-R6a-SM-D3L8C 60-69 years, female 62.3
GTEX-13NYB-0011-R6b-SM-5MR51 40-49 years, male 61.9
GTEX-14BMV-0011-R6b-SM-5YY9I 50-59 years, male 61.5
GTEX-13O3O-0011-R6b-SM-5P9GY 60-69 years, female 61.2
GTEX-17HHY-0011-R6b-SM-7189Z 50-59 years, male 61.1
GTEX-13OVJ-0011-R6b-SM-5L3GH 50-59 years, female 61.0
GTEX-QDT8-0011-R6A-SM-32PKI 30-39 years, female 61.0
GTEX-1ICLZ-0011-R6b-SM-A9G3A 60-69 years, male 60.9
GTEX-ZAB4-0011-R6a-SM-4SOKD 40-49 years, male 60.8
GTEX-1B933-0011-R6b-SM-79OOQ 50-59 years, female 60.7
GTEX-ZXG5-0011-R6a-SM-57WBZ 60-69 years, male 60.6
GTEX-13S7M-0011-R6b-SM-5O9D8 60-69 years, female 60.1
GTEX-13X6K-0011-R6a-SM-5P9K6 60-69 years, female 59.9
GTEX-15DCD-0011-R6b-SM-6M46L 70-79 years, female 59.8
GTEX-1GTWX-0011-R6a-SM-A96RN 60-69 years, male 59.8
GTEX-NPJ7-0011-R6a-SM-2I3G7 60-69 years, female 59.4
GTEX-Y8DK-0011-R6A-SM-4V6EG 60-69 years, male 59.4
GTEX-13IVO-0011-R6b-SM-5K7X9 70-79 years, male 59.3
GTEX-13OVL-0011-R6a-SM-5L3G4 50-59 years, male 59.2
GTEX-13OW5-0011-R6b-SM-5O9BW 60-69 years, male 59.1
GTEX-1F48J-0011-R6a-SM-CJI2F 50-59 years, female 59.0
GTEX-1H1ZS-0011-R6b-SM-A9G1F 70-79 years, male 58.4
GTEX-1I1GS-0011-R6b-SM-CMKHE 60-69 years, male 58.2
GTEX-N7MS-0011-R6a-SM-2HMJ4 60-69 years, male 58.1
GTEX-16Z82-0011-R6a-SM-7IGLV 60-69 years, male 57.8
GTEX-1E2YA-0011-R6b-SM-CE6R2 50-59 years, male 57.8
GTEX-1J1OQ-0011-R6a-SM-ARU86 40-49 years, female 57.8
GTEX-1I1HK-0011-R6b-SM-CM2T9 60-69 years, male 57.7
GTEX-14C5O-0011-R6a-SM-5YYB6 60-69 years, male 57.1
GTEX-15DYW-0011-R6b-SM-6PALA 60-69 years, female 57.1
GTEX-1HBPI-0011-R6b-SM-A9G1T 50-59 years, male 57.0
GTEX-16YQH-0011-R6b-SM-7938T 30-39 years, male 56.8
GTEX-18465-0011-R6a-SM-7LG6M 50-59 years, male 56.4
GTEX-12ZZY-0011-R6b-SM-5EGLA 60-69 years, male 56.2
GTEX-13OW6-0011-R6b-SM-5L3GR 50-59 years, male 56.0
GTEX-14JG1-0011-R6b-SM-5YYAU 40-49 years, male 55.8
GTEX-WWYW-0011-R6A-SM-3NB3G 50-59 years, female 55.5
GTEX-1HB9E-0011-R6b-SM-A9G1P 50-59 years, male 55.5
GTEX-1HGF4-0011-R6a-SM-A96S1 60-69 years, male 55.5
GTEX-1I1GV-0011-R6b-SM-ARU6Q 60-69 years, male 54.8
GTEX-13N1W-0011-R6a-SM-5MR43 70-79 years, male 54.4
GTEX-13FXS-0011-R6b-SM-5L3F7 50-59 years, male 53.8
GTEX-N7MT-0011-R6a-SM-2I3G3 60-69 years, female 53.7
GTEX-WZTO-0011-R6B-SM-4E3J6 40-49 years, male 53.6
GTEX-1CB4J-0011-R6b-SM-9WG7B 60-69 years, male 53.3
GTEX-14ABY-0011-R6a-SM-5PNWR 50-59 years, male 51.8
GTEX-13JUV-0011-R6b-SM-5LZYG 40-49 years, female 51.4
GTEX-NL4W-0011-R6a-SM-2I3GA 50-59 years, male 50.8
GTEX-NL3H-0011-R6a-SM-2I3G8 60-69 years, male 50.0
GTEX-13N2G-0011-R6b-SM-5MR3P 60-69 years, male 49.8
GTEX-YFC4-0011-R6b-SM-4V6E1 40-49 years, female 49.7
GTEX-1B996-0011-R6b-SM-793AQ 60-69 years, male 49.6
GTEX-RU72-0011-R6A-SM-2TF71 50-59 years, female 49.5
GTEX-WL46-0011-R6A-SM-3LK6X 50-59 years, male 49.3
GTEX-15G19-0011-R6b-SM-7KUM3 60-69 years, male 48.7
GTEX-X4XX-0011-R6B-SM-46MWP 60-69 years, male 48.4
GTEX-1GN73-0011-R6b-SM-CJI2T 60-69 years, male 48.4
GTEX-13SLX-0011-R6a-SM-5PNX4 50-59 years, female 47.8
GTEX-R55E-0011-R6A-SM-2TC5T 20-29 years, male 47.6
GTEX-15RJE-0011-R6a-SM-7DHL8 40-49 years, male 47.2
GTEX-WVLH-0011-R6A-SM-3MJFZ 50-59 years, male 47.1
GTEX-1H23P-0011-R6b-SM-A9G1H 60-69 years, male 45.5
GTEX-QVJO-0011-R6A-SM-2S1QN 60-69 years, female 45.3
GTEX-Q2AG-0011-R6A-SM-2HML7 40-49 years, female 45.1
GTEX-1IL2U-0011-R6a-SM-ARZLG 60-69 years, male 45.0
GTEX-14PN4-0011-R6b-SM-69LQU 50-59 years, male 43.8
GTEX-WHSE-0011-R6A-SM-3P5ZP 20-29 years, male 43.1
GTEX-13PDP-0011-R6b-SM-5O9D5 60-69 years, male 40.0
GTEX-ZUA1-0011-R6b-SM-4YCDD 40-49 years, male 36.4
GTEX-1HFI6-0011-R6b-SM-CM2SR 40-49 years, male 35.5
GTEX-X4EP-0011-R6A-SM-3P629 60-69 years, female 28.0
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Brain - Putamen (basal ganglia)
Average nTPM: 53.6
Samples: 205

Max nTPM: 92.5
Min nTPM: 29.1
Std nTPM: 11.5
Median nTPM: 51.3
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 92.5
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 85.7
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 85.1
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 83.7
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 81.3
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 80.9
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 80.6
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 79.6
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 75.3
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 74.9
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 74.4
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 74.0
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 73.8
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 72.8
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 72.7
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 72.3
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 71.4
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 70.9
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 70.6
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 70.5
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 70.1
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 70.0
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 69.8
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 69.7
GTEX-S7SE-0011-R7A-SM-2XCDI 50-59 years, male 68.4
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 67.8
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 66.4
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 66.4
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 66.1
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 65.6
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 65.3
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 65.2
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 64.9
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 64.2
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 63.8
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 63.7
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 63.7
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 63.3
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 62.9
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 62.2
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 62.1
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 62.0
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 62.0
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 61.8
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 61.7
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 61.7
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 61.6
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 61.2
GTEX-1IOXB-0011-R7b-SM-CE6SM 50-59 years, male 61.1
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 61.0
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 60.8
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 60.5
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 60.5
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 60.5
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 60.3
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 59.4
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 59.3
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 59.2
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 59.2
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 59.2
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 59.1
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 58.7
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 58.3
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 58.3
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 57.9
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 57.9
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 57.7
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 57.7
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 57.6
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 57.1
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 56.7
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 56.7
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 56.4
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 56.4
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 56.2
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 55.9
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 55.9
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 55.5
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 55.5
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 55.4
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 55.4
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 55.3
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 55.1
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 54.8
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 54.5
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 54.5
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 53.9
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 53.8
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 53.8
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 53.4
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 53.2
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 53.1
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 52.9
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 52.7
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 52.5
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 52.4
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 52.3
GTEX-TSE9-0011-R7A-SM-3DB7P 60-69 years, female 52.1
GTEX-18464-0011-R7b-SM-731CM 50-59 years, male 51.6
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 51.6
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 51.5
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 51.4
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 51.3
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 51.1
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 50.9
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 50.9
GTEX-NPJ8-0011-R7a-SM-2HMJV 40-49 years, male 50.8
GTEX-OHPN-0011-R7A-SM-2I5FI 60-69 years, female 50.7
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 50.7
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 50.5
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 50.2
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 50.2
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 50.0
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 49.7
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 49.7
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 49.6
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 49.4
GTEX-RU72-0011-R7A-SM-2TF5U 50-59 years, female 49.4
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 49.3
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 49.3
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 49.2
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 49.2
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 49.1
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 49.1
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 49.1
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 49.0
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 48.8
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 48.8
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 48.7
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 48.7
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 48.4
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 48.3
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 48.3
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 48.3
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 48.2
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 48.2
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 48.1
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 48.1
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 48.0
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 48.0
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 47.8
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 47.8
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 47.3
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 47.3
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 47.2
GTEX-N7MS-0011-R7a-SM-2HMKN 60-69 years, male 47.2
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 47.1
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 47.1
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 46.8
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 46.6
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 46.6
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 46.5
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 46.4
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 46.3
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 46.2
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 46.1
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 46.0
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 45.9
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 45.7
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 45.4
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 44.7
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 44.5
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 44.4
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 44.3
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 44.1
GTEX-P44G-0011-R7A-SM-2I3F9 30-39 years, male 43.8
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 43.7
GTEX-1J1OQ-0011-R7b-SM-ARU87 40-49 years, female 43.6
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 43.5
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 43.5
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 43.1
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 42.0
GTEX-R55E-0011-R7A-SM-2TC5Z 20-29 years, male 41.7
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 41.6
GTEX-NL3H-0011-R7a-SM-2I3G5 60-69 years, male 41.6
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 41.5
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 41.3
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 41.3
GTEX-QVJO-0011-R7A-SM-2S1QO 60-69 years, female 41.0
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 40.9
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 40.8
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 40.6
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 40.6
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 40.5
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 40.3
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 40.3
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 38.7
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 38.6
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 38.3
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 38.1
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 38.0
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 37.9
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 37.4
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 37.1
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 36.9
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 36.3
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 36.1
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 35.7
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 35.6
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 35.6
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 35.3
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 34.7
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 34.5
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 33.4
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 29.1
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BASAL GANGLIA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

57.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 50.8
FF:10164-103B2 76 years, female 50.8
Nucleus accumbens
Scaled Tags Per Million: 37.3
FF:10037-101F1 23-56 years, mixed 37.3
Putamen
Scaled Tags Per Million: 57.8
FF:10176-103C5 60 years, female 57.8
Globus pallidus
Scaled Tags Per Million: 43.0
FF:10175-103C4 60 years, female 64.3
FF:10161-103A8 76 years, female 21.7

BASAL GANGLIA - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

58.5
Pig sample Sample description nTPM
Caudate
nTPM: 58.5
Samples: 4

Max nTPM: 65.9
Min nTPM: 48.4
Sample A Female 65.9
Sample B Female 55.5
Sample C Male 64.2
Sample D Male 48.4
Putamen
nTPM: 51.3
Samples: 4

Max nTPM: 59.1
Min nTPM: 46.1
Sample A Female 46.6
Sample B Female 46.1
Sample C Male 59.1
Sample D Male 53.5
Septum
nTPM: 55.8
Samples: 4

Max nTPM: 74.1
Min nTPM: 43.3
Sample A Female 55.8
Sample B Female 50.1
Sample C Male 43.3
Sample D Male 74.1
Ventral pallidum
nTPM: 46.7
Samples: 4

Max nTPM: 52.0
Min nTPM: 36.3
Sample A Female 51.3
Sample B Female 47.2
Sample C Male 36.3
Sample D Male 52.0

BASAL GANGLIA - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

113.4
Mouse sample Sample description nTPM
Caudate putamen
nTPM: 72.1
Samples: 4

Max nTPM: 77.9
Min nTPM: 68.7
Sample A Male 68.7
Sample B Male 68.7
Sample C Female 77.9
Sample D Female 73.1
Septum
nTPM: 113.4
Samples: 4

Max nTPM: 125.5
Min nTPM: 90.0
Sample A Male 90.0
Sample B Male 123.6
Sample C Female 125.5
Sample D Female 114.4
Ventral forebrain
nTPM: 76.6
Samples: 4

Max nTPM: 82.7
Min nTPM: 72.8
Sample A Male 75.3
Sample B Male 72.8
Sample C Female 82.7
Sample D Female 75.4

BASAL GANGLIA - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

1.0
Allen experiment id Experiment description Expression energy
Striatum
Expression energy: 1.0
69838701 Antisense, RP_050317_04_F04, Mouse strain C57BL/6J (56 days, male) 1.9
77910681 Antisense, RP_070208_04_E11, Mouse strain C57BL/6J (56 days, male) 0.0
Pallidum
Expression energy: 0.8
69838701 Antisense, RP_050317_04_F04, Mouse strain C57BL/6J (56 days, male) 1.6
77910681 Antisense, RP_070208_04_E11, Mouse strain C57BL/6J (56 days, male) 0.0

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