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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA Brain:
592.5
nTPM
FANTOM5:
41.3
Scaled Tags Per Million
PONS - HPA Brain RNA-seq
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
592.5
Sample id
Sample description
nTPM
Anterior cochlear nucleus, ventral nTPM: 531.7
2090
Male, age 80, both hemispheres
642.6
2188
Female, age 91, both hemispheres
609.1
2301
Female, age 85, both hemispheres
439.7
1984
Male, age 76, both hemispheres
435.3
Dorsal cochlear nucleus nTPM: 548.4
2802
Male, age 74, right hemisphere
616.8
2187
Female, age 91, both hemispheres
579.8
2378
Male, age 80, both hemispheres
572.4
2370
Male, age 61, both hemispheres
515.2
2058
Male, age 76, both hemispheres
458.0
Dorsal tegmental nucleus nTPM: 512.4
2083
Male, age 80, both hemispheres
580.0
2326
Male, age 74, both hemispheres
579.7
1936
Male, age 76, left hemisphere
448.5
2358
Male, age 61, both hemispheres
441.5
Dorsolateral tegmental area nTPM: 542.8
2654
Male, age 80, both hemispheres
625.6
2337
Male, age 61, both hemispheres
620.4
2360
Male, age 74, both hemispheres
552.1
2751
Female, age 85, both hemispheres
531.2
2141
Male, age 76, both hemispheres
384.8
Kolliker-Fuse nucleus nTPM: 504.5
2315
Male, age 76, right hemisphere
617.1
2163
Male, age 80, both hemispheres
466.8
2793
Female, age 91, left hemisphere
429.7
Lateral lemniscal nuclei nTPM: 425.0
2746
Female, age 85, left hemisphere
505.5
2453
Male, age 74, right hemisphere
410.3
2320
Female, age 91, left hemisphere
409.6
2036
Male, age 80, both hemispheres
408.7
2169
Male, age 76, both hemispheres
391.0
Lateral parabrachial nucleus nTPM: 555.6
2013
Male, age 80, both hemispheres
638.4
2792
Male, age 76, both hemispheres
595.2
2139
Female, age 85, right hemisphere
556.4
2790
Male, age 61, both hemispheres
432.6
Lateral vestibular nucleus nTPM: 466.3
2311
Male, age 80, both hemispheres
558.7
2184
Male, age 76, both hemispheres
373.9
Locus coeruleus nTPM: 431.6
2123
Female, age 91, both hemispheres
523.9
2317
Female, age 72, unknown
471.3
2162
Male, age 80, both hemispheres
448.7
2014
Male, age 55, unknown
432.4
2720
Male, age 74, both hemispheres
406.8
1980
Male, age 76, both hemispheres
401.7
2788
Male, age 74, unknown
336.4
Medial parabrachial nucleus nTPM: 473.3
2170
Female, age 91, both hemispheres
606.7
2854
Male, age 80, both hemispheres
467.2
2463
Female, age 85, right hemisphere
466.6
2156
Male, age 61, both hemispheres
416.7
2786
Male, age 76, both hemispheres
409.2
Medial periolivary nuclei nTPM: 467.5
2081
Male, age 80, both hemispheres
570.3
2063
Male, age 76, both hemispheres
545.9
2791
Male, age 74, right hemisphere
443.5
2458
Female, age 91, both hemispheres
418.7
2171
Female, age 85, both hemispheres
359.0
Motor facial nucleus nTPM: 448.0
2126
Male, age 61, both hemispheres
530.3
2365
Male, age 74, right hemisphere
494.8
2062
Male, age 76, both hemispheres
487.7
2795
Female, age 91, both hemispheres
471.2
2697
Female, age 85, both hemispheres
402.1
2327
Male, age 80, both hemispheres
302.2
Motor trigeminal nucleus nTPM: 444.2
2335
Male, age 61, both hemispheres
489.4
2560
Male, age 74, both hemispheres
476.1
2321
Female, age 91, both hemispheres
439.4
2079
Male, age 80, both hemispheres
417.6
2309
Male, age 76, both hemispheres
398.3
Nuclei of the trapezoid body nTPM: 450.7
1983
Male, age 76, both hemispheres
598.7
2368
Female, age 91, both hemispheres
426.7
2166
Male, age 80, both hemispheres
423.6
2735
Female, age 85, both hemispheres
406.0
2159
Male, age 61, both hemispheres
398.3
Nucleus raphe magnus nTPM: 427.3
2051
Male, age 76, both hemispheres
520.3
2459
Female, age 91, both hemispheres
451.7
2160
Male, age 61, both hemispheres
434.6
2455
Male, age 74, both hemispheres
420.7
2328
Male, age 80, both hemispheres
379.5
2172
Female, age 85, both hemispheres
356.7
Paramedian reticular nucleus nTPM: 476.1
2057
Male, age 80, both hemispheres
522.9
2052
Male, age 76, both hemispheres
481.3
2313
Male, age 61, both hemispheres
461.8
2050
Female, age 85, both hemispheres
438.4
Pedunculopontine tegmental nucleus nTPM: 483.1
2338
Male, age 61, both hemispheres
556.0
2334
Male, age 80, both hemispheres
512.7
1921
Female, age 85, both hemispheres
380.6
Pontine nuclei nTPM: 501.8
2319
Female, age 91, both hemispheres
568.9
2115
Male, age 80, left hemisphere
531.9
2109
Female, age 72, unknown
520.9
1968
Male, age 76, left hemisphere
495.2
2787
Female, age 85, both hemispheres
489.7
1863
Male, age 55, unknown
479.6
2454
Male, age 74, left hemisphere
467.8
2727
Male, age 61, right hemisphere
460.0
Pontine raphe nucleus nTPM: 427.1
2122
Female, age 85, midline
453.0
2853
Male, age 76, midline
401.3
Posteroventral cochlear nucleus nTPM: 592.5
2341
Male, age 80, both hemispheres
702.2
2135
Female, age 91, both hemispheres
674.7
2371
Male, age 61, both hemispheres
615.3
2070
Male, age 76, both hemispheres
489.9
2752
Female, age 85, both hemispheres
480.1
Principal sensory trigeminal nucleus nTPM: 418.5
2158
Male, age 61, both hemispheres
466.2
2367
Female, age 91, left hemisphere
460.0
2008
Male, age 80, left hemisphere
388.3
2324
Male, age 76, both hemispheres
359.5
Reticular pontine nucleus, caudal nTPM: 464.9
2559
Male, age 74, both hemispheres
537.8
2092
Male, age 76, both hemispheres
537.1
2457
Female, age 91, both hemispheres
470.4
2332
Male, age 80, right hemisphere
314.2
Reticular pontine nucleus, oral nTPM: 453.7
1939
Male, age 80, both hemispheres
495.3
2366
Female, age 91, both hemispheres
459.8
2361
Male, age 74, both hemispheres
451.3
2167
Male, age 76, both hemispheres
431.9
2012
Female, age 85, both hemispheres
430.2
Reticulotegmental nucleus nTPM: 472.7
2452
Male, age 74, both hemispheres
580.5
2333
Male, age 80, both hemispheres
468.2
2322
Female, age 91, both hemispheres
449.9
2325
Male, age 76, both hemispheres
392.3
Spinal trigeminal nucleus, oral nTPM: 433.0
2164
Male, age 80, both hemispheres
475.4
1978
Male, age 76, both hemispheres
433.8
2737
Female, age 85, both hemispheres
389.9
Subcoeruleus area nTPM: 486.9
2451
Male, age 74, both hemispheres
648.4
2369
Female, age 85, left hemisphere
563.5
1958
Male, age 80, both hemispheres
444.0
2089
Male, age 76, left hemisphere
392.5
2323
Female, age 91, left hemisphere
385.9
Superior olive nTPM: 446.7
2020
Male, age 76, both hemispheres
534.9
2364
Male, age 74, right hemisphere
489.4
1875
Female, age 85, both hemispheres
433.5
2561
Female, age 91, both hemispheres
427.0
2329
Male, age 80, right hemisphere
348.6
Ventral periolivary nuclei nTPM: 427.2
2023
Male, age 76, both hemispheres
553.0
2794
Female, age 91, left hemisphere
429.9
2165
Male, age 80, both hemispheres
425.6
2130
Female, age 85, both hemispheres
300.2
Ventrolateral tegmental area, A5 NE cell group nTPM: 448.5
2161
Male, age 80, both hemispheres
506.7
2456
Female, age 91, both hemispheres
488.4
2359
Male, age 61, both hemispheres
464.2
1959
Male, age 76, both hemispheres
428.9
2840
Female, age 85, both hemispheres
409.3
2449
Male, age 74, both hemispheres
393.2
PONS - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Max subtype Scaled Tags Per Millioni
Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.
The Human Protein Atlas project is funded
