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CANCER LUNG CANCER Show tissue menu
BREAST CANCER CARCINOID CERVICAL CANCER COLORECTAL CANCER ENDOMETRIAL CANCER GLIOMA HEAD AND NECK CANCER LIVER CANCER LUNG CANCER LYMPHOMA
MELANOMA OVARIAN CANCER PANCREATIC CANCER PROSTATE CANCER RENAL CANCER SKIN CANCER STOMACH CANCER TESTIS CANCER THYROID CANCER UROTHELIAL CANCER
LUAD TCGA LUAD VALIDATION LUSC TCGA LUSC VALIDATION PROTEIN LUAD CPTAC PROTEIN LUSC CPTAC PROTEIN EXPRESSION
ANTIBODIES
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Dictionary
Lung cancer
Human cancer
Lung adenocarcinoma
Lung squamous cell carcinoma
LUNG ADENOCARCINOMA (TCGA) - Interactive survival scatter ploti

The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.

The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".

Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.

Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.

& Survival analysisi

Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.

RPL10 is not prognostic in Lung Adenocarcinoma (TCGA)


Stage:


Survival analysis
Current cut offi

Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.

:
Best expression cut offi

Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .

When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.

: 3035.04
Median expressioni

Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.

: N/A
Median follow up timei

Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.

: N/A
P scorei

Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.

N/A
5-year survival highi

5-year survival for patients with higher expression than the expression cutoff.

For melanoma and glioma, 3-year survival is shown.

N/A
5-year survival lowi

5-year survival for patients with lower expression than the expression cutoff.

For melanoma and glioma, 3-year survival is shown.

N/A
TCGA RNA samplesi

RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.

Average pTPM 4201.6
Number of samples 497
Samples
Sample Description pTPM
TCGA-64-1678-01A 70 years, female, white, stage:'--, alive, 1189 days 15063.6
TCGA-05-4426-01A 71 years, male, stage:Stage IB, alive, 791 days 14998.3
TCGA-44-8117-01A 54 years, female, white, stage:Stage IB, alive, 385 days 14771.4
TCGA-91-8496-01A 63 years, female, white, stage:Stage IB, alive, 505 days 13219.3
TCGA-67-3772-01A 82 years, female, white, stage:Stage IB, alive, 573 days 11329.1
TCGA-55-8090-01A 80 years, male, white, stage:Stage IA, dead, 598 days 11261.1
TCGA-64-1680-01A 63 years, male, white, stage:Stage IV, alive, 1126 days 11002.4
TCGA-55-6986-01A 74 years, female, white, stage:Stage IB, alive, 3261 days 10006.1
TCGA-64-5815-01A 74 years, male, white, stage:Stage IIB, alive, 866 days 9566.8
TCGA-44-3398-01A 77 years, female, white, stage:Stage IA, alive, 1163 days 9510.9
TCGA-35-3615-01A 57 years, male, white, stage:Stage IB, alive, 14 days 9482.6
TCGA-35-5375-01A 61 years, male, white, stage:Stage IIIA, alive, 264 days 8807.1
TCGA-95-7948-01A 42 years, female, white, stage:Stage IB, alive, 476 days 8207.3
TCGA-49-4494-01A 77 years, male, white, stage:Stage IIIA, dead, 1081 days 8151.2
TCGA-73-4670-01A 69 years, female, white, stage:Stage IV, alive, 131 days 7943.8
TCGA-64-5775-01A 71 years, male, white, stage:Stage IIIA, dead, 62 days 7893.4
TCGA-75-6212-01A female, stage:Stage IIB, dead, 1516 days 7870.5
TCGA-05-4425-01A 70 years, female, stage:Stage IV, alive, 669 days 7825.3
TCGA-50-6594-01A 79 years, female, black or african american, stage:Stage IIIA, dead, 370 days 7624.1
TCGA-95-8494-01A 67 years, male, white, stage:Stage IIA, alive, 84 days 7591.8
TCGA-55-6543-01A 60 years, female, white, stage:Stage IA, alive, 435 days 7570.4
TCGA-55-6712-01A 71 years, male, white, stage:Stage IIA, dead, 171 days 7465.6
TCGA-35-4123-01A 38 years, male, white, stage:Stage IA, alive, 182 days 7445.4
TCGA-78-7146-01A 71 years, female, white, stage:Stage IIIA, dead, 173 days 7441.3
TCGA-78-8655-01A 77 years, female, stage:Stage IA, alive, 2360 days 7251.8
TCGA-49-4506-01A 68 years, female, white, stage:Stage IIB, dead, 999 days 7213.1
TCGA-49-6767-01A 46 years, female, white, stage:Stage IIB, alive, 677 days 7185.3
TCGA-73-4676-01A 45 years, male, white, stage:Stage IIA, dead, 281 days 7105.8
TCGA-64-1676-01A 58 years, male, white, stage:Stage IA, alive, 1728 days 7096.1
TCGA-44-3917-01A 33 years, female, white, stage:Stage IB, alive, 1183 days 7068.3
TCGA-78-7152-01A 65 years, male, white, stage:Stage IB, dead, 1215 days 7037.1
TCGA-97-8547-01A 78 years, female, stage:Stage IIIA, alive, 657 days 6982.2
TCGA-38-4631-01A 72 years, female, white, stage:Stage IB, dead, 354 days 6977.6
TCGA-67-3773-01A 84 years, female, white, stage:Stage IB, alive, 427 days 6965.7
TCGA-49-4488-01A 74 years, female, white, stage:Stage IA, dead, 869 days 6832.7
TCGA-44-2666-01A 43 years, male, white, stage:Stage IB, dead, 97 days 6781.7
TCGA-64-1677-01A 77 years, female, white, stage:Stage IIIA, dead, 628 days 6756.6
TCGA-49-4486-01A 72 years, male, white, stage:Stage IA, dead, 2318 days 6684.3
TCGA-38-4627-01A 64 years, female, white, stage:Stage IIA, dead, 1147 days 6639.0
TCGA-38-4629-01A 68 years, male, white, stage:Stage IIB, dead, 864 days 6598.6
TCGA-49-4510-01A 51 years, female, black or african american, stage:Stage IIB, dead, 896 days 6558.3
TCGA-50-5942-01A 67 years, female, white, stage:Stage IA, alive, 1847 days 6507.3
TCGA-55-7281-01A 70 years, female, white, stage:Stage IA, alive, 872 days 6503.5
TCGA-78-7158-01A 59 years, female, white, stage:Stage IIIB, dead, 179 days 6424.3
TCGA-69-7973-01A 42 years, female, white, stage:Stage IB, alive, 230 days 6415.2
TCGA-67-6216-01A 57 years, female, white, stage:Stage IA, alive, 141 days 6350.7
TCGA-78-7539-01A 75 years, female, white, stage:Stage IIA, alive, 791 days 6325.5
TCGA-NJ-A7XG-01A 49 years, male, black or african american, stage:Stage IIIA, alive, 617 days 6320.3
TCGA-78-7161-01A 69 years, female, white, stage:Stage IIB, dead, 291 days 6310.2
TCGA-44-2661-01A 69 years, female, white, stage:Stage IA, alive, 1159 days 6306.1
TCGA-44-2659-01A 65 years, female, white, stage:Stage IIB, alive, 1367 days 6304.3
TCGA-44-8119-01A 73 years, male, white, stage:Stage IIB, alive, 285 days 6201.2
TCGA-86-8054-01A 61 years, male, white, stage:Stage IIB, alive, 1148 days 6190.4
TCGA-97-A4M0-01A 60 years, female, white, stage:Stage IB, alive, 652 days 6166.0
TCGA-49-4501-01A 67 years, female, white, stage:Stage IB, dead, 1421 days 6135.9
TCGA-50-5935-01A 86 years, female, white, stage:Stage IA, dead, 653 days 6124.5
TCGA-97-8172-01A 75 years, female, white, stage:Stage IB, alive, 545 days 6101.9
TCGA-73-4659-01A 66 years, male, white, stage:Stage IIIA, dead, 711 days 6095.4
TCGA-50-5068-01A 59 years, female, white, stage:Stage IIB, dead, 1499 days 6092.4
TCGA-50-5932-01A 75 years, male, white, stage:Stage IIB, dead, 1235 days 6084.3
TCGA-05-4250-01A 79 years, female, stage:Stage IIIA, dead, 121 days 6067.4
TCGA-55-7725-01A 68 years, female, white, stage:Stage IA, alive, 442 days 6054.9
TCGA-95-7567-01A 61 years, male, white, stage:Stage IIB, alive, 568 days 6020.7
TCGA-73-4666-01A 52 years, female, white, stage:Stage IV, alive, 800 days 6018.5
TCGA-44-2665-01A 55 years, female, white, stage:Stage IIB, alive, 1301 days 5997.2
TCGA-49-AAQV-01A 63 years, female, black or african american, stage:Stage II, dead, 677 days 5936.7
TCGA-44-A47A-01A 78 years, female, white, stage:Stage IB, alive, 466 days 5883.2
TCGA-97-7554-01A 83 years, female, white, stage:Stage IIIA, alive, 775 days 5879.3
TCGA-NJ-A55O-01A 56 years, female, white, stage:Stage IIA, alive, 13 days 5830.5
TCGA-91-8499-01A 76 years, female, white, stage:Stage IA, alive, 36 days 5803.2
TCGA-95-8039-01A 72 years, male, white, stage:Stage IA, alive, 830 days 5794.8
TCGA-55-6972-01A 72 years, male, white, stage:Stage IB, dead, 1632 days 5794.5
TCGA-55-6983-01A 81 years, male, white, stage:Stage IIB, alive, 2823 days 5761.3
TCGA-55-8087-01A 59 years, female, white, stage:Stage IB, alive, 462 days 5712.5
TCGA-05-4389-01A 70 years, male, stage:Stage IA, alive, 1369 days 5695.7
TCGA-J2-8194-01A 69 years, female, white, stage:Stage IIB, alive, 724 days 5694.4
TCGA-05-4434-01A 67 years, female, stage:Stage IV, dead, 457 days 5660.3
TCGA-97-A4M6-01A 45 years, female, white, stage:Stage IA, alive, 568 days 5648.2
TCGA-38-4632-01A 42 years, male, black or african american, stage:Stage IV, dead, 1357 days 5618.7
TCGA-78-7156-01A 62 years, male, white, stage:Stage IV, dead, 976 days 5582.1
TCGA-50-5055-01A 79 years, female, white, stage:Stage IIA, dead, 1830 days 5573.8
TCGA-05-4390-01A 58 years, female, stage:Stage IB, alive, 1126 days 5568.4
TCGA-05-5428-01A 57 years, male, stage:Stage IIA, alive, 670 days 5549.8
TCGA-78-7154-01A 72 years, male, white, stage:Stage IIIA, dead, 593 days 5489.6
TCGA-67-6215-01A 52 years, female, white, stage:Stage IB, alive, 174 days 5460.7
TCGA-86-7714-01A 61 years, female, black or african american, stage:Stage IIIA, dead, 625 days 5455.7
TCGA-64-5774-01A 60 years, male, white, stage:Stage IB, alive, 2676 days 5451.0
TCGA-86-7955-01A 62 years, male, white, stage:Stage IB, alive, 1072 days 5340.2
TCGA-49-4505-01A 61 years, female, white, stage:Stage IIB, dead, 428 days 5213.3
TCGA-55-8207-01A 73 years, male, white, stage:Stage IB, alive, 977 days 5205.4
TCGA-NJ-A4YP-01A 52 years, male, white, stage:Stage IB, alive, 50 days 5185.0
TCGA-05-5423-01A 65 years, male, stage:Stage IIB, alive, 151 days 5183.1
TCGA-86-8280-01A 54 years, female, white, stage:Stage IIA, alive, 701 days 5182.8
TCGA-73-4675-01A 59 years, male, white, stage:Stage IIIA, dead, 922 days 5180.9
TCGA-73-4658-01A 80 years, female, white, stage:Stage IB, dead, 1600 days 5178.5
TCGA-38-7271-01A 72 years, female, white, stage:Stage IA, dead, 800 days 5171.8
TCGA-97-A4M1-01A 52 years, female, white, stage:Stage IA, alive, 601 days 5112.0
TCGA-78-7537-01A 72 years, male, stage:Stage IB, dead, 1622 days 5100.3
TCGA-55-1596-01A 55 years, male, asian, stage:Stage IIB, alive, 2065 days 5091.3
TCGA-99-7458-01A 74 years, female, white, stage:Stage IIIA, alive, 747 days 5067.1
TCGA-55-A48Z-01A 60 years, female, white, stage:Stage IIIB, alive, 651 days 5059.6
TCGA-44-6776-01A 60 years, female, white, stage:Stage IA, alive, 2616 days 5056.3
TCGA-97-8177-01A 59 years, female, white, stage:Stage IB, alive, 499 days 5052.6
TCGA-55-8203-01A 69 years, female, white, stage:Stage IA, alive, 547 days 5052.1
TCGA-78-7160-01A 61 years, male, white, stage:Stage IV, dead, 697 days 5045.2
TCGA-NJ-A55A-01A 76 years, female, white, stage:Stage IB, alive, 15 days 5043.6
TCGA-86-8278-01A 63 years, female, white, stage:Stage IIB, alive, 944 days 5030.0
TCGA-78-7163-01A 60 years, male, white, stage:Stage IB, alive, 7248 days 5024.3
TCGA-49-6761-01A 68 years, female, white, stage:Stage IIIA, alive, 354 days 5014.4
TCGA-55-7903-01A 64 years, male, white, stage:Stage IA, alive, 567 days 4984.5
TCGA-44-3918-01A 60 years, female, white, stage:Stage IA, alive, 1036 days 4972.5
TCGA-NJ-A4YI-01A 87 years, female, white, stage:Stage IIIA, dead, 4 days 4931.9
TCGA-49-6744-01A 64 years, female, white, stage:Stage IIA, alive, 1683 days 4931.0
TCGA-86-8359-01A 52 years, male, white, stage:Stage IIIA, dead, 444 days 4929.2
TCGA-78-7166-01A 84 years, male, white, stage:Stage IIB, dead, 258 days 4925.1
TCGA-44-6777-01A 85 years, female, white, stage:Stage IB, dead, 987 days 4920.6
TCGA-91-7771-01A 62 years, male, white, stage:Stage IIB, alive, 492 days 4903.7
TCGA-55-7994-01A 81 years, male, white, stage:Stage IIB, alive, 603 days 4897.7
TCGA-67-3770-01A 70 years, female, white, stage:Stage IA, alive, 610 days 4893.8
TCGA-50-8457-01A 63 years, female, black or african american, stage:Stage IA, alive, 1125 days 4891.3
TCGA-86-7953-01A 69 years, female, white, stage:Stage IA, alive, 997 days 4880.7
TCGA-69-7764-01A 75 years, male, white, stage:Stage IA, alive, 414 days 4871.1
TCGA-97-8171-01A 81 years, male, asian, stage:Stage IV, alive, 568 days 4870.0
TCGA-55-7576-01A 54 years, male, black or african american, stage:Stage IB, alive, 670 days 4856.9
TCGA-49-6745-01A 82 years, male, white, stage:Stage IIIA, alive, 522 days 4852.9
TCGA-55-8507-01A 53 years, male, white, stage:Stage IA, alive, 418 days 4848.3
TCGA-55-6980-01A 56 years, male, white, stage:Stage IA, alive, 2109 days 4824.7
TCGA-55-7227-01A 77 years, male, white, stage:Stage IIIA, dead, 952 days 4818.5
TCGA-05-4403-01A 76 years, male, stage:Stage IB, alive, 578 days 4800.3
TCGA-J2-8192-01A 65 years, female, white, stage:Stage IIA, alive, 739 days 4799.7
TCGA-50-5066-01A 72 years, male, black or african american, stage:Stage IB, alive, 1442 days 4783.4
TCGA-55-6978-01A 81 years, male, white, stage:Stage IIA, dead, 176 days 4781.1
TCGA-80-5611-01A male, stage:Stage IB, alive, 2595 days 4775.8
TCGA-62-A46Y-01A 70 years, female, white, stage:Stage IIIA, dead, 414 days 4765.8
TCGA-53-7626-01A 76 years, female, white, stage:Stage IIA, dead, 929 days 4726.6
TCGA-78-7542-01A 56 years, male, white, stage:Stage IB, dead, 321 days 4720.9
TCGA-05-4415-01A 57 years, male, stage:Stage IIIB, dead, 91 days 4704.8
TCGA-80-5608-01A female, stage:Stage IA, alive, 2832 days 4684.5
TCGA-50-5936-01A 58 years, male, white, stage:Stage IIIA, dead, 257 days 4664.3
TCGA-93-A4JO-01A 70 years, male, white, stage:Stage IA, dead, 33 days 4636.6
TCGA-44-7667-01A 49 years, female, white, stage:Stage IIB, alive, 1097 days 4633.4
TCGA-NJ-A4YG-01A 65 years, male, white, stage:Stage IB, alive, 2261 days 4625.3
TCGA-05-4430-01A 59 years, female, stage:Stage IB, alive, 761 days 4611.2
TCGA-78-7148-01A 71 years, male, white, stage:Stage IIB, dead, 626 days 4600.0
TCGA-64-1681-01A 61 years, female, white, stage:Stage IA, dead, 1167 days 4590.7
TCGA-05-4405-01A 74 years, female, stage:Stage IB, alive, 610 days 4589.1
TCGA-62-8402-01A 73 years, female, white, stage:Stage IIIA, dead, 1498 days 4583.4
TCGA-55-8615-01A 67 years, male, white, stage:Stage IIIA, alive, 446 days 4582.2
TCGA-91-8497-01A 75 years, female, white, stage:Stage IA, dead, 434 days 4572.7
TCGA-62-A472-01A 70 years, male, white, stage:Stage IIB, alive, 910 days 4570.8
TCGA-97-8174-01A 67 years, male, white, stage:Stage IIA, dead, 164 days 4557.4
TCGA-55-8206-01A 56 years, male, white, stage:Stage IA, alive, 888 days 4541.8
TCGA-55-8616-01A 58 years, female, white, stage:Stage IB, alive, 48 days 4514.8
TCGA-86-8076-01A 42 years, male, white, stage:Stage IA, alive, 993 days 4514.3
TCGA-75-7025-01A male, stage:Stage IB, alive, 3305 days 4512.5
TCGA-44-5644-01A 51 years, female, white, stage:Stage IB, alive, 863 days 4509.9
TCGA-86-8669-01A 64 years, male, white, stage:Stage IA, alive, 938 days 4490.3
TCGA-78-7147-01A 67 years, female, white, stage:Stage IIB, dead, 586 days 4486.8
TCGA-78-8662-01A 53 years, female, stage:Stage IB, dead, 3361 days 4486.0
TCGA-44-4112-01A 60 years, female, white, stage:Stage IB, dead, 808 days 4478.9
TCGA-38-4628-01A 65 years, female, white, stage:Stage IIB, dead, 1492 days 4475.9
TCGA-44-5643-01A 53 years, male, black or african american, stage:Stage IIIA, alive, 1013 days 4465.9
TCGA-05-4382-01A 68 years, male, stage:Stage IB, alive, 607 days 4455.6
TCGA-44-5645-01A 61 years, female, black or african american, stage:Stage IA, alive, 852 days 4447.8
TCGA-75-5125-01A male, stage:Stage IIB, dead, 2027 days 4436.5
TCGA-50-5933-01A 72 years, male, white, stage:Stage IIIB, dead, 2393 days 4424.3
TCGA-05-4432-01A 66 years, male, stage:Stage IIB, alive, 761 days 4412.7
TCGA-55-6970-01A 67 years, female, white, stage:Stage IIIA, dead, 464 days 4390.4
TCGA-55-8097-01A 60 years, female, white, stage:Stage IA, alive, 476 days 4374.2
TCGA-05-4418-01A 69 years, male, stage:Stage IIIA, dead, 274 days 4372.2
TCGA-55-A57B-01A 80 years, female, black or african american, stage:Stage IA, alive, 546 days 4371.9
TCGA-55-7574-01A 64 years, female, white, stage:Stage IB, dead, 995 days 4343.9
TCGA-86-6562-01A 52 years, male, white, stage:Stage IIA, dead, 376 days 4343.2
TCGA-55-7573-01A 72 years, female, white, stage:Stage IA, alive, 487 days 4339.2
TCGA-38-4630-01A 75 years, female, white, stage:Stage IB, dead, 1073 days 4334.0
TCGA-50-8460-01A 74 years, male, white, stage:Stage IA, alive, 829 days 4321.1
TCGA-55-A48X-01A 63 years, female, white, stage:Stage IIA, alive, 689 days 4310.4
TCGA-78-7153-01A 65 years, female, white, stage:Stage IB, alive, 3635 days 4310.0
TCGA-86-8671-01A 72 years, female, white, stage:Stage IIB, alive, 839 days 4309.6
TCGA-MP-A4SY-01A 61 years, male, white, stage:Stage IIB, dead, 1501 days 4301.4
TCGA-05-4249-01A 67 years, male, stage:Stage IB, alive, 1523 days 4299.5
TCGA-MP-A4TK-01A 56 years, female, stage:Stage IIB, dead, 582 days 4288.6
TCGA-73-7498-01A 58 years, female, white, stage:Stage IA, alive, 1189 days 4280.6
TCGA-97-7937-01A 65 years, male, white, stage:Stage IB, alive, 564 days 4273.7
TCGA-97-7546-01A 76 years, female, white, stage:Stage IA, alive, 1285 days 4269.3
TCGA-44-2656-01A 59 years, male, white, stage:Stage IB, alive, 1429 days 4267.0
TCGA-44-A47B-01A 79 years, male, white, stage:Stage IB, alive, 287 days 4262.8
TCGA-91-6829-01A 78 years, male, white, stage:Stage IB, dead, 1258 days 4258.0
TCGA-69-7974-01A 54 years, female, white, stage:Stage IIIA, alive, 184 days 4254.5
TCGA-MP-A4T8-01A 68 years, male, stage:Stage IIIA, dead, 161 days 4249.8
TCGA-38-6178-01A 70 years, female, white, stage:Stage IIIA, alive, 448 days 4241.1
TCGA-50-6593-01A 49 years, female, white, stage:Stage IIIA, dead, 336 days 4230.7
TCGA-62-A46P-01A 65 years, male, white, stage:Stage IB, dead, 594 days 4217.7
TCGA-05-5425-01A 68 years, male, stage:Stage IIB, alive, 882 days 4209.7
TCGA-78-8640-01A 59 years, male, stage:Stage IIA, alive, 7062 days 4189.9
TCGA-50-5931-01A 75 years, female, white, stage:Stage IB, dead, 434 days 4188.9
TCGA-MP-A4TH-01A 70 years, female, white, stage:Stage IA, alive, 741 days 4185.7
TCGA-97-7941-01A 72 years, female, white, stage:Stage IA, alive, 484 days 4185.3
TCGA-55-A493-01A 54 years, female, white, stage:Stage IB, alive, 28 days 4181.6
TCGA-99-8032-01A 61 years, male, white, stage:Stage IA, alive, 44 days 4176.3
TCGA-73-4677-01A 74 years, male, white, stage:'--, dead, 38 days 4167.2
TCGA-49-AAR0-01A 57 years, male, black or african american, stage:Stage IA, alive, 4765 days 4153.6
TCGA-67-6217-01A 73 years, female, white, stage:Stage IIA, alive, 422 days 4151.7
TCGA-05-5429-01A 60 years, male, stage:Stage IIIA, dead, 275 days 4147.4
TCGA-35-4122-01A 69 years, male, white, stage:Stage IA, alive, 225 days 4134.8
TCGA-86-7701-01A 66 years, male, white, stage:Stage IV, alive, 947 days 4132.2
TCGA-MP-A4TC-01A 77 years, male, white, stage:Stage IIIA, dead, 74 days 4126.6
TCGA-78-7159-01A 60 years, female, white, stage:Stage IA, alive, 1974 days 4114.8
TCGA-50-6595-01A 74 years, female, white, stage:Stage IIIA, dead, 189 days 4111.6
TCGA-99-8025-01A 72 years, female, black or african american, stage:Stage IIIA, alive, 1060 days 4111.6
TCGA-L9-A8F4-01A 64 years, female, black or african american, stage:Stage IB, alive, 476 days 4106.8
TCGA-55-8205-01A 76 years, female, white, stage:Stage IIA, alive, 599 days 4103.4
TCGA-97-8175-01A 55 years, female, white, stage:Stage IB, alive, 551 days 4096.6
TCGA-05-4398-01A 47 years, female, stage:Stage IIIB, alive, 1431 days 4081.6
TCGA-73-7499-01A 81 years, female, white, stage:Stage IB, dead, 1531 days 4074.9
TCGA-71-6725-01A 48 years, female, asian, stage:Stage IB, alive, 256 days 4071.0
TCGA-05-4427-01A 65 years, female, stage:Stage IIB, alive, 791 days 4067.1
TCGA-MP-A4TJ-01A 62 years, female, stage:Stage IA, dead, 339 days 4064.1
TCGA-50-5944-01A 69 years, female, white, stage:Stage IA, alive, 1750 days 4058.3
TCGA-62-8398-01A 55 years, male, white, stage:Stage IIIA, dead, 444 days 4046.8
TCGA-86-7954-01A 68 years, female, white, stage:Stage IB, alive, 605 days 4043.0
TCGA-50-5045-01A 57 years, female, black or african american, stage:'--, dead, 2174 days 4042.4
TCGA-78-7162-01A 75 years, male, white, stage:Stage IA, dead, 3169 days 4027.8
TCGA-86-8585-01A 57 years, male, white, stage:Stage IB, alive, 353 days 4023.2
TCGA-86-8055-01A 79 years, male, white, stage:Stage IIA, dead, 124 days 4018.3
TCGA-L9-A7SV-01A 69 years, male, black or african american, stage:Stage IIA, alive, 565 days 4014.4
TCGA-55-7914-01A 71 years, female, white, stage:Stage IIA, dead, 187 days 4012.7
TCGA-69-8453-01A 77 years, male, white, stage:Stage IIB, alive, 813 days 3996.9
TCGA-75-5146-01A male, stage:Stage IB, alive, 2368 days 3991.1
TCGA-L9-A443-01A 63 years, female, white, stage:Stage IA, dead, 193 days 3989.9
TCGA-97-A4M5-01A 83 years, male, white, stage:Stage IA, alive, 634 days 3989.9
TCGA-MP-A4T9-01A 54 years, female, white, stage:Stage IIIA, dead, 1265 days 3978.4
TCGA-69-7763-01A 69 years, male, white, stage:Stage IA, alive, 690 days 3975.9
TCGA-93-A4JQ-01A 49 years, male, white, stage:Stage IA, alive, 526 days 3972.1
TCGA-86-8073-01A 58 years, male, white, stage:Stage IB, alive, 740 days 3971.5
TCGA-91-6847-01A 62 years, female, white, stage:Stage IB, alive, 842 days 3968.4
TCGA-62-8399-01A 62 years, male, white, stage:Stage IIIA, alive, 2696 days 3941.1
TCGA-44-3919-01A 71 years, female, white, stage:Stage IA, dead, 1026 days 3933.0
TCGA-95-A4VK-01A 74 years, female, white, stage:Stage IIIA, alive, 651 days 3932.0
TCGA-75-5147-01A female, stage:Stage IB, alive, 1333 days 3930.4
TCGA-55-7816-01A 49 years, female, white, stage:Stage IV, dead, 468 days 3920.0
TCGA-86-8074-01A 62 years, female, white, stage:Stage IIA, alive, 24 days 3918.8
TCGA-73-4668-01A 66 years, female, american indian or alaska native, stage:Stage IIB, alive, 467 days 3915.6
TCGA-55-8091-01A 74 years, male, white, stage:Stage IB, alive, 600 days 3914.5
TCGA-44-7660-01A 72 years, male, white, stage:Stage IB, alive, 592 days 3911.4
TCGA-44-6148-01A 60 years, male, white, stage:Stage IA, alive, 704 days 3905.9
TCGA-50-7109-01A 60 years, male, white, stage:Stage IA, dead, 308 days 3897.8
TCGA-55-8299-01A 61 years, female, white, stage:Stage IA, dead, 469 days 3883.7
TCGA-38-4625-01A 66 years, female, white, stage:Stage IB, alive, 2973 days 3878.7
TCGA-95-A4VN-01A 62 years, female, white, stage:Stage IIA, alive, 553 days 3863.0
TCGA-69-7979-01A 71 years, female, white, stage:Stage IB, alive, 408 days 3860.9
TCGA-64-5781-01A 55 years, female, white, stage:Stage IB, alive, 1559 days 3859.3
TCGA-55-A4DG-01A 71 years, male, white, stage:Stage IA, alive, 608 days 3855.9
TCGA-97-A4LX-01A 81 years, male, white, stage:Stage IB, alive, 614 days 3855.8
TCGA-MP-A4TE-01A 56 years, male, white, stage:Stage IIA, dead, 896 days 3849.9
TCGA-86-8279-01A 46 years, male, white, stage:Stage IIA, alive, 949 days 3849.2
TCGA-55-8511-01A 73 years, female, white, stage:Stage IB, alive, 552 days 3848.0
TCGA-78-7145-01A 52 years, female, white, stage:Stage IV, dead, 826 days 3832.8
TCGA-97-8552-01A 55 years, female, white, stage:Stage I, alive, 626 days 3822.1
TCGA-MP-A4T6-01A 76 years, female, white, stage:Stage IIIA, dead, 1790 days 3818.1
TCGA-91-A4BD-01A 78 years, male, white, stage:Stage IIA, alive, 603 days 3803.0
TCGA-05-4422-01A 68 years, male, stage:Stage IB, alive, 365 days 3800.3
TCGA-49-AARN-01A 56 years, female, black or african american, stage:Stage IA, dead, 1135 days 3791.9
TCGA-05-4420-01A 41 years, male, stage:Stage IB, alive, 912 days 3784.9
TCGA-50-5049-01A 70 years, male, white, stage:Stage IA, alive, 3094 days 3777.1
TCGA-67-3774-01A 73 years, female, white, stage:Stage IB, alive, 385 days 3769.7
TCGA-MP-A4TF-01A 58 years, female, white, stage:Stage IIA, dead, 336 days 3748.7
TCGA-53-7624-01A 40 years, female, white, stage:Stage IV, dead, 1043 days 3747.9
TCGA-44-6147-01A 67 years, female, white, stage:Stage IA, alive, 845 days 3741.4
TCGA-91-6835-01A 81 years, female, white, stage:Stage IA, alive, 79 days 3736.1
TCGA-44-8120-01A 58 years, male, black or african american, stage:Stage IB, alive, 260 days 3733.7
TCGA-49-4512-01A 69 years, female, white, stage:Stage IIIA, dead, 905 days 3729.1
TCGA-44-6778-01A 59 years, male, black or african american, stage:Stage IA, alive, 1864 days 3706.1
TCGA-86-A4P8-01A 59 years, female, white, stage:Stage IIIA, alive, 805 days 3698.9
TCGA-MP-A4TI-01A 72 years, male, white, stage:Stage IIA, dead, 429 days 3696.3
TCGA-55-A4DF-01A 88 years, male, white, stage:Stage IA, dead, 440 days 3693.5
TCGA-05-4402-01A 57 years, female, stage:Stage IV, dead, 244 days 3693.3
TCGA-93-7347-01A 76 years, female, white, stage:Stage IA, alive, 683 days 3688.0
TCGA-50-5941-01A 55 years, female, white, stage:Stage IIIA, alive, 1474 days 3686.2
TCGA-97-7938-01A 76 years, female, white, stage:Stage IA, dead, 18 days 3685.4
TCGA-55-8514-01A 70 years, female, black or african american, stage:Stage IB, alive, 520 days 3684.3
TCGA-O1-A52J-01A 74 years, female, white, stage:Stage IA, dead, 1798 days 3673.2
TCGA-78-7143-01A 62 years, female, white, stage:Stage IB, dead, 4961 days 3673.0
TCGA-91-6830-01A 65 years, female, white, stage:Stage IIA, alive, 60 days 3665.5
TCGA-62-A470-01A 84 years, male, white, stage:Stage IB, dead, 1194 days 3654.0
TCGA-62-8394-01A 65 years, female, white, stage:Stage IIIB, dead, 139 days 3651.7
TCGA-55-7911-01A 70 years, female, white, stage:Stage IA, alive, 537 days 3647.7
TCGA-55-8302-01A 54 years, male, white, stage:Stage IB, alive, 478 days 3637.9
TCGA-44-2668-01A 51 years, male, white, stage:Stage IB, dead, 761 days 3627.5
TCGA-44-2657-01A 74 years, female, white, stage:Stage IB, alive, 1351 days 3624.8
TCGA-78-8660-01A 69 years, male, stage:Stage IIB, dead, 321 days 3620.8
TCGA-55-6985-01A 58 years, female, white, stage:Stage IB, alive, 1233 days 3597.0
TCGA-78-7536-01A 69 years, male, white, stage:Stage IIIA, dead, 244 days 3585.0
TCGA-73-4662-01A 65 years, female, white, stage:Stage IA, alive, 2515 days 3575.2
TCGA-86-8674-01A 50 years, male, white, stage:Stage IIA, alive, 806 days 3565.2
TCGA-44-7661-01A 69 years, female, white, stage:Stage IB, dead, 557 days 3560.0
TCGA-49-4490-01A 45 years, female, white, stage:Stage IIIA, dead, 385 days 3551.1
TCGA-55-7283-01A 76 years, female, white, stage:Stage IIIA, alive, 609 days 3534.6
TCGA-97-8176-01A 63 years, male, white, stage:Stage IIIA, dead, 468 days 3528.1
TCGA-86-8668-01A 61 years, female, white, stage:Stage IA, alive, 423 days 3512.4
TCGA-64-5778-01A 60 years, male, white, stage:Stage IB, alive, 1305 days 3509.3
TCGA-55-8513-01A 77 years, female, white, stage:Stage IIB, alive, 791 days 3500.9
TCGA-55-8301-01A 58 years, male, white, stage:Stage IB, alive, 534 days 3488.8
TCGA-MN-A4N5-01A 63 years, male, white, stage:Stage IA, alive, 84 days 3482.4
TCGA-05-4384-01A 66 years, male, stage:Stage IIIA, alive, 426 days 3470.2
TCGA-62-A46V-01A 78 years, female, white, stage:Stage IB, alive, 2199 days 3467.6
TCGA-44-A4SU-01A 67 years, female, white, stage:Stage IA, dead, 409 days 3466.2
TCGA-L9-A50W-01A 75 years, male, black or african american, stage:Stage IIA, dead, 442 days 3457.8
TCGA-05-4417-01A 51 years, female, stage:Stage IB, alive, 455 days 3446.2
TCGA-44-7671-01A 64 years, male, black or african american, stage:Stage IB, alive, 889 days 3443.1
TCGA-69-8253-01A 59 years, female, black or african american, stage:Stage IIA, alive, 426 days 3442.2
TCGA-50-6591-01A 63 years, female, white, stage:Stage IV, dead, 119 days 3428.6
TCGA-55-6984-01A 71 years, female, white, stage:Stage IIB, dead, 760 days 3427.9
TCGA-86-8056-01A 63 years, female, white, stage:Stage IIIA, alive, 139 days 3415.0
TCGA-97-7547-01A 67 years, female, white, stage:Stage IB, alive, 1965 days 3400.5
TCGA-97-A4M7-01A 74 years, male, white, stage:Stage IA, alive, 629 days 3392.2
TCGA-55-6642-01A 63 years, male, white, stage:Stage IB, alive, 2449 days 3389.2
TCGA-83-5908-01A 59 years, female, white, stage:Stage IA, alive, 824 days 3385.5
TCGA-78-7167-01A 77 years, male, white, stage:Stage IV, dead, 2681 days 3379.5
TCGA-86-7713-01A 70 years, male, white, stage:Stage IIA, alive, 1157 days 3376.9
TCGA-55-A494-01A 61 years, female, white, stage:Stage IB, alive, 481 days 3372.9
TCGA-97-A4M3-01A 69 years, female, white, stage:Stage IA, alive, 540 days 3369.5
TCGA-86-A4D0-01A 48 years, male, white, stage:Stage IIA, dead, 116 days 3366.5
TCGA-05-4397-01A 65 years, male, stage:Stage IIB, dead, 731 days 3365.2
TCGA-55-8096-01A 67 years, female, white, stage:Stage IB, dead, 719 days 3363.3
TCGA-05-5715-01A 69 years, female, stage:Stage IB, alive, 62 days 3363.3
TCGA-55-A491-01A 81 years, female, white, stage:Stage IA, alive, 626 days 3355.8
TCGA-55-7907-01A 77 years, male, white, stage:Stage IIA, dead, 343 days 3345.2
TCGA-62-A46R-01A 54 years, female, white, stage:Stage IB, dead, 1725 days 3342.2
TCGA-99-AA5R-01A 70 years, female, black or african american, stage:Stage IA, alive, 658 days 3341.7
TCGA-91-6840-01A 59 years, female, white, stage:Stage IA, alive, 372 days 3334.9
TCGA-55-8619-01A 72 years, female, white, stage:Stage IIB, alive, 416 days 3334.1
TCGA-49-AAR3-01A 69 years, male, black or african american, stage:Stage IIB, alive, 1893 days 3332.4
TCGA-86-8673-01A 61 years, male, white, stage:Stage IB, alive, 862 days 3329.0
TCGA-05-5420-01A 67 years, male, stage:Stage IIIA, alive, 457 days 3326.7
TCGA-38-4626-01A 57 years, female, white, stage:'--, alive, 3674 days 3326.7
TCGA-50-5946-01A 62 years, male, white, stage:Stage IA, alive, 1617 days 3323.3
TCGA-50-5939-01A 85 years, male, white, stage:Stage IB, dead, 460 days 3301.0
TCGA-L9-A5IP-01A 40 years, female, black or african american, stage:Stage IV, dead, 58 days 3291.8
TCGA-55-6987-01A 77 years, male, white, stage:Stage IA, alive, 2137 days 3282.5
TCGA-S2-AA1A-01A 68 years, female, black or african american, stage:Stage IA, alive, 513 days 3282.3
TCGA-95-7039-01A 54 years, female, white, stage:Stage IIB, alive, 1272 days 3279.5
TCGA-91-6836-01A 52 years, female, white, stage:Stage IB, alive, 417 days 3272.8
TCGA-69-7978-01A 59 years, male, white, stage:Stage IIB, alive, 134 days 3270.8
TCGA-55-A492-01A 70 years, female, white, stage:Stage IA, alive, 596 days 3266.2
TCGA-99-8028-01A 50 years, female, black or african american, stage:Stage IA, alive, 1118 days 3262.7
TCGA-97-8179-01A 72 years, male, white, stage:Stage IA, alive, 435 days 3259.2
TCGA-78-7150-01A 59 years, male, white, stage:Stage IIB, dead, 666 days 3252.2
TCGA-MN-A4N1-01A 60 years, male, black or african american, stage:Stage IIA, alive, 827 days 3248.9
TCGA-69-7765-01A 56 years, male, black or african american, stage:'--, alive, 165 days 3238.5
TCGA-50-6673-01A 84 years, female, white, stage:Stage I, dead, 22 days 3219.4
TCGA-44-2655-01A 65 years, female, white, stage:Stage IA, alive, 1324 days 3216.9
TCGA-62-A46O-01A 65 years, female, white, stage:Stage IB, dead, 1454 days 3212.8
TCGA-50-5044-01A 72 years, female, white, stage:Stage IIIB, dead, 624 days 3209.0
TCGA-50-5051-01A 42 years, female, white, stage:Stage IIIA, dead, 478 days 3206.0
TCGA-44-6774-01A 56 years, female, white, stage:Stage IIIA, alive, 658 days 3203.3
TCGA-78-7633-01A 67 years, male, white, stage:Stage IB, dead, 1528 days 3200.0
TCGA-55-8621-01A 75 years, female, white, stage:Stage IA, alive, 515 days 3199.1
TCGA-75-6206-01A male, stage:Stage IB, alive, 2590 days 3198.1
TCGA-05-4433-01A 82 years, male, stage:Stage IB, alive, 730 days 3184.0
TCGA-95-7944-01A 71 years, male, white, stage:Stage IA, alive, 377 days 3179.4
TCGA-86-8075-01A 66 years, female, white, stage:Stage IB, dead, 694 days 3179.0
TCGA-55-8614-01A 76 years, male, white, stage:Stage IB, alive, 536 days 3166.5
TCGA-4B-A93V-01A 52 years, female, black or african american, stage:Stage IA, dead, 300 days 3163.4
TCGA-55-8094-01A 51 years, male, white, stage:Stage IV, alive, 541 days 3139.9
TCGA-L9-A743-01A 56 years, male, black or african american, stage:Stage IIA, alive, 664 days 3135.4
TCGA-95-7562-01A 71 years, male, black or african american, stage:Stage IIA, dead, 87 days 3132.7
TCGA-MP-A4SW-01A 53 years, male, white, stage:Stage IIB, dead, 1778 days 3113.7
TCGA-91-6831-01A 66 years, male, white, stage:Stage IB, alive, 310 days 3090.5
TCGA-50-6597-01A 79 years, female, white, stage:Stage IB, dead, 1268 days 3089.2
TCGA-55-6971-01A 59 years, female, white, stage:Stage IB, alive, 1400 days 3088.7
TCGA-69-7760-01A 73 years, male, white, stage:Stage IIB, alive, 202 days 3086.4
TCGA-49-AARE-01A 51 years, female, black or african american, stage:Stage IA, dead, 1229 days 3080.7
TCGA-64-1679-01A 58 years, female, white, stage:Stage IIIA, alive, 2488 days 3077.0
TCGA-86-A4P7-01A 63 years, female, white, stage:Stage IB, alive, 415 days 3073.3
TCGA-71-8520-01A 60 years, female, asian, stage:Stage IB, dead, 210 days 3073.1
TCGA-78-7220-01A 53 years, female, white, stage:Stage IIIA, dead, 807 days 3072.2
TCGA-55-1594-01A 68 years, male, white, stage:Stage IIIA, alive, 1178 days 3064.5
TCGA-44-7669-01A 59 years, male, black or african american, stage:Stage IIA, dead, 574 days 3059.4
TCGA-MP-A4SV-01A 67 years, male, stage:Stage IB, dead, 2620 days 3057.8
TCGA-86-A456-01A 78 years, female, asian, stage:Stage IA, alive, 896 days 3051.3
TCGA-49-4487-01A 72 years, female, white, stage:Stage IA, dead, 855 days 3039.4
TCGA-05-4424-01A 70 years, male, stage:Stage IIB, alive, 913 days 3039.2
TCGA-MP-A4TD-01A 71 years, male, white, stage:Stage IIIA, dead, 307 days 3038.8
TCGA-55-8512-01A 41 years, male, white, stage:Stage IV, dead, 607 days 3035.1
TCGA-44-7659-01A 70 years, male, white, stage:Stage IA, alive, 691 days 3035.0
TCGA-50-8459-01A 68 years, male, white, stage:Stage IIB, alive, 1119 days 3025.5
TCGA-91-6849-01A 75 years, female, black or african american, stage:Stage IIIA, alive, 35 days 3015.8
TCGA-78-7535-01A 45 years, male, white, stage:Stage IB, dead, 949 days 3015.0
TCGA-44-6145-01A 62 years, female, white, stage:Stage IA, alive, 595 days 3010.0
TCGA-97-7552-01A 70 years, male, white, stage:Stage IB, alive, 1932 days 3005.6
TCGA-53-A4EZ-01A 63 years, male, white, stage:Stage IIA, alive, 1071 days 3000.7
TCGA-62-8397-01A 70 years, female, white, stage:Stage IIB, alive, 1289 days 2971.8
TCGA-55-6975-01A 61 years, male, white, stage:Stage IIB, dead, 118 days 2956.1
TCGA-MP-A4T4-01A 68 years, female, white, stage:Stage IIB, dead, 2617 days 2955.5
TCGA-55-8510-01A 55 years, female, white, stage:Stage IB, alive, 539 days 2954.5
TCGA-55-7727-01A 70 years, male, white, stage:Stage IIIA, alive, 119 days 2947.1
TCGA-91-6848-01A 59 years, male, white, stage:Stage IIIA, alive, 224 days 2939.0
TCGA-55-1592-01A 65 years, male, white, stage:Stage IA, dead, 701 days 2931.3
TCGA-55-7724-01A 76 years, female, white, stage:Stage IB, alive, 705 days 2918.9
TCGA-L9-A444-01A 60 years, female, white, stage:Stage IA, alive, 307 days 2915.8
TCGA-97-7553-01A 58 years, female, white, stage:Stage IA, alive, 1870 days 2913.8
TCGA-67-3771-01A 77 years, female, black or african american, stage:Stage IA, alive, 610 days 2904.4
TCGA-L4-A4E6-01A 67 years, male, white, stage:Stage IA, alive, 435 days 2901.4
TCGA-55-5899-01A 58 years, male, white, stage:'--, alive, 930 days 2883.6
TCGA-55-6979-01A 59 years, female, white, stage:Stage IIB, dead, 237 days 2883.5
TCGA-64-5779-01A 61 years, male, white, stage:Stage IIIA, alive, 864 days 2883.1
TCGA-MP-A5C7-01A 76 years, female, white, stage:Stage IB, alive, 2248 days 2868.1
TCGA-95-7043-01A 63 years, female, white, stage:Stage IA, dead, 503 days 2864.8
TCGA-95-A4VP-01A 66 years, female, white, stage:Stage IIIA, alive, 605 days 2860.6
TCGA-55-8089-01A 56 years, male, white, stage:Stage IA, dead, 702 days 2846.0
TCGA-55-8508-01A 60 years, female, black or african american, stage:Stage IIA, alive, 617 days 2831.2
TCGA-49-6742-01A 70 years, male, white, stage:Stage IIA, dead, 488 days 2829.0
TCGA-38-A44F-01A 80 years, male, white, stage:Stage IB, alive, 133 days 2804.0
TCGA-55-8204-01A 87 years, female, white, stage:Stage IB, alive, 515 days 2799.9
TCGA-55-8505-01A 62 years, male, white, stage:Stage IIIA, alive, 440 days 2787.6
TCGA-93-8067-01A 77 years, male, asian, stage:Stage IB, alive, 186 days 2768.2
TCGA-69-8254-01A 85 years, male, white, stage:'--, alive, 409 days 2765.5
TCGA-55-7910-01A 50 years, female, black or african american, stage:Stage IIA, alive, 1040 days 2764.2
TCGA-55-6982-01A 79 years, female, white, stage:Stage IIB, dead, 995 days 2753.3
TCGA-86-8358-01A 44 years, male, white, stage:Stage IB, alive, 653 days 2750.8
TCGA-NJ-A4YQ-01A 69 years, female, white, stage:Stage IA, alive, 1432 days 2750.6
TCGA-55-8085-01A 64 years, male, white, stage:Stage IA, alive, 904 days 2738.6
TCGA-55-7726-01A 72 years, female, white, stage:Stage IA, alive, 652 days 2729.6
TCGA-MP-A4T7-01A 75 years, female, stage:Stage IV, dead, 167 days 2720.9
TCGA-50-5930-01A 47 years, male, white, stage:Stage IIIA, dead, 282 days 2712.0
TCGA-93-A4JP-01A 64 years, male, asian, stage:Stage IV, alive, 578 days 2709.2
TCGA-62-A46S-01A 73 years, male, white, stage:Stage IB, dead, 1653 days 2704.7
TCGA-55-7815-01A 76 years, male, stage:Stage IB, alive, 773 days 2694.1
TCGA-97-A4M2-01A 66 years, male, white, stage:Stage IA, alive, 624 days 2655.5
TCGA-91-6828-01A 70 years, male, white, stage:Stage IA, alive, 323 days 2643.9
TCGA-55-8506-01A 62 years, female, white, stage:Stage IIB, alive, 11 days 2640.1
TCGA-55-7995-01A 73 years, female, white, stage:Stage IA, alive, 889 days 2633.1
TCGA-55-A490-01A 78 years, male, white, stage:Stage IIA, dead, 99 days 2630.7
TCGA-49-4507-01A 73 years, female, white, stage:Stage IIIA, dead, 268 days 2629.8
TCGA-86-A4JF-01A 56 years, male, white, stage:Stage IIB, dead, 737 days 2607.5
TCGA-69-7980-01A 70 years, female, white, stage:Stage I, alive, 411 days 2600.4
TCGA-55-7728-01A 64 years, female, white, stage:Stage IB, alive, 704 days 2594.8
TCGA-L4-A4E5-01A 48 years, female, white, stage:Stage I, alive, 578 days 2593.3
TCGA-44-6779-01A 50 years, female, white, stage:Stage IIB, dead, 500 days 2583.7
TCGA-75-7027-01A male, stage:Stage IB, alive, 3059 days 2574.1
TCGA-J2-A4AG-01A 66 years, female, white, stage:Stage IA, alive, 988 days 2565.6
TCGA-93-7348-01A 75 years, female, white, stage:Stage IA, alive, 531 days 2564.3
TCGA-55-8620-01A 60 years, male, white, stage:Stage IV, dead, 375 days 2558.2
TCGA-62-8395-01A 80 years, female, white, stage:Stage IIB, alive, 1216 days 2549.7
TCGA-44-7672-01A 52 years, female, white, stage:Stage IA, alive, 719 days 2548.4
TCGA-55-8208-01A 73 years, female, white, stage:Stage IA, alive, 674 days 2538.9
TCGA-49-AARR-01A 68 years, male, black or african american, stage:Stage IA, alive, 4992 days 2530.0
TCGA-49-AARO-01A 39 years, female, black or african american, stage:Stage IA, alive, 3759 days 2519.6
TCGA-44-7662-01A 61 years, male, white, stage:Stage IB, alive, 218 days 2512.4
TCGA-78-8648-01A 58 years, female, stage:Stage IIB, dead, 1209 days 2507.1
TCGA-95-7947-01A 67 years, male, white, stage:Stage IA, alive, 477 days 2505.2
TCGA-62-A471-01A 64 years, male, white, stage:Stage IIB, alive, 1246 days 2456.4
TCGA-44-7670-01A 47 years, female, white, stage:Stage IIA, alive, 882 days 2451.9
TCGA-44-3396-01A 74 years, female, white, stage:Stage IIIA, alive, 1130 days 2435.0
TCGA-69-8255-01A 71 years, male, white, stage:Stage IA, alive, 129 days 2431.8
TCGA-55-A48Y-01A 69 years, male, white, stage:Stage IIA, alive, 630 days 2428.9
TCGA-44-A47G-01A 73 years, female, white, stage:Stage IA, alive, 351 days 2327.2
TCGA-MN-A4N4-01A 57 years, male, white, stage:Stage IA, alive, 1175 days 2326.1
TCGA-05-4396-01A 76 years, male, stage:Stage IIIB, dead, 303 days 2304.1
TCGA-49-6743-01A 81 years, female, white, stage:Stage IIIA, alive, 1621 days 2299.2
TCGA-44-6146-01A 64 years, male, white, stage:Stage IIB, alive, 728 days 2268.6
TCGA-86-8672-01A 59 years, male, white, stage:Stage IIB, dead, 19 days 2255.6
TCGA-NJ-A4YF-01A 50 years, female, black or african american, stage:Stage IA, alive, 2161 days 2213.4
TCGA-J2-A4AE-01A 77 years, female, white, stage:Stage IA, alive, 1079 days 2205.5
TCGA-78-7540-01A 66 years, female, white, stage:Stage IB, dead, 1197 days 2188.2
TCGA-73-A9RS-01A 41 years, male, black or african american, stage:Stage IIB, dead, 340 days 2182.4
TCGA-44-A4SS-01A 73 years, male, white, stage:Stage IA, alive, 415 days 2168.3
TCGA-50-5072-01A 74 years, male, white, stage:Stage IIIA, dead, 250 days 2163.5
TCGA-55-6981-01A 53 years, female, white, stage:Stage IIIA, dead, 1379 days 2140.6
TCGA-99-8033-01A 74 years, female, white, stage:Stage IV, dead, 656 days 2133.0
TCGA-44-2662-01A 65 years, male, white, stage:Stage IB, alive, 1280 days 2128.8
TCGA-86-6851-01A 73 years, female, white, stage:Stage IIA, alive, 179 days 2092.5
TCGA-78-7149-01A 71 years, male, white, stage:Stage IIIB, alive, 3940 days 2069.3
TCGA-55-8092-01A 75 years, male, white, stage:Stage IIB, dead, 154 days 2027.2
TCGA-49-AAR4-01A 51 years, male, black or african american, stage:Stage IIIA, dead, 879 days 2026.6
TCGA-75-6214-01A female, stage:Stage IIIA, dead, 1115 days 2002.8
TCGA-53-7813-01A 51 years, female, white, stage:Stage IIIB, alive, 424 days 1996.3
TCGA-49-4514-01A 79 years, female, white, stage:Stage IA, alive, 1700 days 1980.9
TCGA-44-A479-01A 73 years, female, black or african american, stage:Stage IB, alive, 486 days 1931.1
TCGA-50-6592-01A 71 years, female, white, stage:Stage IB, dead, 777 days 1930.3
TCGA-91-A4BC-01A 59 years, male, white, stage:Stage IIA, alive, 44 days 1907.1
TCGA-50-6590-01A 72 years, female, white, stage:Stage IB, dead, 1288 days 1852.2
TCGA-44-6775-01A 72 years, female, white, stage:Stage IB, alive, 705 days 1835.5
TCGA-49-AAR9-01A 61 years, male, black or african american, stage:Stage IIB, dead, 260 days 1812.0
TCGA-93-A4JN-01A 71 years, male, white, stage:Stage IV, alive, 718 days 1790.7
TCGA-55-6968-01A 61 years, male, white, stage:Stage IV, dead, 1293 days 1777.0
TCGA-69-A59K-01A 60 years, female, black or african american, stage:Stage IIB, alive, 591 days 1708.2
TCGA-J2-A4AD-01A 61 years, female, white, stage:Stage IA, dead, 550 days 1687.2
TCGA-NJ-A55R-01A 67 years, male, white, stage:Stage IA, alive, 603 days 1638.5
TCGA-69-7761-01A 84 years, male, white, stage:Stage IB, alive, 186 days 1626.7
TCGA-78-7155-01A 68 years, male, white, stage:Stage IB, dead, 1171 days 1613.9
TCGA-55-7570-01A 60 years, male, black or african american, stage:Stage IA, alive, 824 days 1549.5
TCGA-MP-A4TA-01A 75 years, female, white, stage:Stage IA, dead, 950 days 1506.1
TCGA-49-AAR2-01A 64 years, male, black or african american, stage:Stage IB, alive, 2224 days 1443.7
TCGA-86-7711-01A 70 years, male, white, stage:Stage IIA, dead, 1046 days 1290.9
TCGA-49-AARQ-01A 41 years, female, black or african american, stage:Stage I, alive, 6732 days 1052.6
Show allShow less
LUNG ADENOCARCINOMA (VALIDATION) - Interactive survival scatter ploti

The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.

The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".

Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.

Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.

& Survival analysisi

Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.

RPL10 is not prognostic in Lung Adenocarcinoma (validation)


Stage:

Survival analysis
Current cut offi

Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.

:
Best expression cut offi

Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .

When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.

: 5042.8
Median expressioni

Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.

: N/A
Median follow up timei

Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.

: N/A
P scorei

Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.

N/A
5-year survival highi

5-year survival for patients with higher expression than the expression cutoff.

For melanoma and glioma, 3-year survival is shown.

N/A
5-year survival lowi

5-year survival for patients with lower expression than the expression cutoff.

For melanoma and glioma, 3-year survival is shown.

N/A
TCGA RNA samplesi

RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.

Average pTPM 4586.2
Number of samples 105
Samples
Sample Description pTPM
L616 54 years, male, stage:Stage IA, dead, 410 days 11064.9
L773 64 years, female, stage:Stage IV, dead, 311 days 10871.3
L879 75 years, male, stage:Stage IV, dead, 873 days 9115.0
L532 69 years, female, stage:Stage IA, dead, 301 days 8510.2
L567 83 years, female, stage:Stage IIIA, dead, 1299 days 8199.8
L439 80 years, male, stage:Stage IIB, dead, 2773 days 7440.3
L842 62 years, female, stage:Stage IB, alive, 2005 days 7339.9
L683 77 years, female, stage:Stage IIA, dead, 612 days 7088.4
L766 59 years, male, stage:Stage IB, alive, 1793 days 6488.5
L458 76 years, female, stage:Stage IA, dead, 223 days 6387.6
L689 69 years, male, stage:Stage IA, alive, 1943 days 6332.7
L829 76 years, male, stage:Stage IA, alive, 2173 days 6263.9
L688 57 years, male, stage:Stage IIIA, dead, 789 days 6129.1
L619 68 years, female, stage:Stage IIIA, dead, 1905 days 6098.4
L826 45 years, female, stage:Stage IV, dead, 935 days 6027.9
L605 74 years, female, stage:Stage IA, alive, 2460 days 6027.3
L446 71 years, female, stage:Stage IIB, dead, 415 days 5855.5
L778 65 years, female, stage:Stage IA, alive, 1600 days 5730.3
L791 66 years, female, stage:Stage IIIA, dead, 368 days 5640.2
L682 64 years, female, stage:Stage IIB, dead, 840 days 5551.7
L440 80 years, male, stage:Stage IIB, dead, 651 days 5523.2
L851 70 years, male, stage:Stage IB, dead, 1315 days 5486.0
L885 62 years, female, stage:Stage IA, alive, 1618 days 5415.1
L838 71 years, female, stage:Stage IA, dead, 1005 days 5341.5
L731 59 years, female, stage:Stage IA, dead, 964 days 5340.0
L877 70 years, female, stage:Stage IA, alive, 1599 days 5152.4
L662 66 years, male, stage:Stage IA, dead, 865 days 5060.1
L617 68 years, male, stage:Stage IIIA, dead, 238 days 5042.8
L612 80 years, female, stage:Stage IIIA, alive, 2410 days 4995.9
L569 76 years, female, stage:Stage IA, alive, 2531 days 4947.1
L621 79 years, female, stage:Stage IIIA, dead, 1487 days 4924.0
L749 49 years, female, stage:Stage IIIA, dead, 189 days 4895.7
L531 74 years, male, stage:Stage IB, dead, 928 days 4879.1
L557 81 years, female, stage:Stage IB, alive, 2580 days 4853.6
L530 76 years, female, stage:Stage IIA, dead, 308 days 4834.8
L566 58 years, male, stage:Stage IB, alive, 2489 days 4773.0
L493 56 years, female, stage:Stage IIB, alive, 2945 days 4756.1
L827 70 years, male, stage:Stage IIB, dead, 1105 days 4666.1
L871 74 years, male, stage:Stage IB, dead, 873 days 4643.0
L768 60 years, male, stage:Stage IIIA, dead, 472 days 4623.9
L656 58 years, male, stage:Stage IA, alive, 2227 days 4477.0
L875 69 years, female, stage:Stage IA, alive, 1675 days 4446.8
L473 66 years, female, stage:Stage IA, alive, 3021 days 4424.8
L808 48 years, female, stage:Stage IA, alive, 3001 days 4416.7
L678 65 years, female, stage:Stage IB, dead, 1114 days 4394.6
L810 64 years, female, stage:Stage IIIA, dead, 625 days 4378.2
L865 75 years, female, stage:Stage IIB, alive, 1927 days 4370.8
L484 64 years, female, stage:Stage IA, alive, 2895 days 4300.4
L850 77 years, male, stage:Stage IIIA, dead, 997 days 4284.5
L673 74 years, female, stage:Stage IA, dead, 568 days 4252.2
L455 52 years, female, stage:Stage IA, alive, 3315 days 4240.7
L703 71 years, male, stage:Stage IIA, dead, 1137 days 4231.0
L638 65 years, male, stage:Stage IA, alive, 2076 days 4221.3
L603 70 years, female, stage:Stage IB, dead, 972 days 4212.5
L626 76 years, female, stage:Stage IA, dead, 1994 days 4185.3
L546 57 years, male, stage:Stage IA, dead, 973 days 4179.9
L561 62 years, female, stage:Stage IA, alive, 2543 days 4175.7
L874 56 years, female, stage:Stage IIIA, alive, 1733 days 4167.9
L607 59 years, male, stage:Stage IB, alive, 2572 days 4163.1
L504 65 years, female, stage:Stage IA, dead, 1295 days 4160.8
L400 78 years, male, stage:Stage IIA, dead, 1233 days 4143.8
L887 77 years, male, stage:Stage IA, dead, 374 days 4119.4
L585 70 years, female, stage:Stage IIA, dead, 402 days 4089.8
L816 73 years, female, stage:Stage IIA, dead, 353 days 4086.7
L782 73 years, female, stage:Stage IIB, alive, 3371 days 4082.4
L620 70 years, female, stage:Stage IIIA, dead, 338 days 3960.2
L695 68 years, female, stage:Stage IB, dead, 1762 days 3857.9
L752 65 years, male, stage:Stage IIIA, alive, 1647 days 3846.8
L828 68 years, female, stage:Stage IIB, alive, 2222 days 3780.3
L401 74 years, male, stage:Stage IIIA, dead, 1888 days 3776.9
L832 65 years, female, stage:Stage IA, alive, 2145 days 3745.7
L545 60 years, female, stage:Stage IA, alive, 2874 days 3724.0
L746 64 years, female, stage:Stage IIIA, dead, 594 days 3723.3
L738 74 years, female, stage:Stage IB, dead, 1314 days 3646.3
L606 55 years, male, stage:Stage IA, alive, 2336 days 3629.8
L800 66 years, female, stage:Stage IA, dead, 2417 days 3580.8
L725 64 years, female, stage:Stage IA, alive, 1830 days 3560.3
L613 72 years, male, stage:Stage IIIA, dead, 19 days 3503.8
L663 62 years, female, stage:Stage IB, alive, 2018 days 3502.5
L551 62 years, male, stage:Stage IA, alive, 2924 days 3487.8
L872 71 years, female, stage:Stage IA, alive, 1793 days 3485.6
L511 56 years, female, stage:Stage IIIA, alive, 2942 days 3474.2
L413 72 years, female, stage:Stage IIIA, dead, 313 days 3461.4
L890 56 years, female, stage:Stage IIB, dead, 1264 days 3429.1
L601 75 years, male, stage:Stage IB, dead, 2068 days 3419.5
L593 78 years, male, stage:Stage IA, dead, 2436 days 3368.7
L543 65 years, male, stage:Stage IA, alive, 2711 days 3328.5
L630 65 years, female, stage:Stage IA, dead, 1733 days 3266.3
L596 74 years, female, stage:Stage IA, alive, 2319 days 3216.9
L462 67 years, male, stage:Stage IIIA, dead, 568 days 3213.7
L565 59 years, female, stage:Stage IB, dead, 543 days 3193.2
L802 62 years, female, stage:Stage IA, dead, 773 days 3184.6
L541 70 years, female, stage:Stage IIIA, dead, 915 days 3179.6
L599 80 years, male, stage:Stage IB, dead, 2083 days 3111.1
L873 62 years, female, stage:Stage IA, alive, 1740 days 3101.1
L710 72 years, female, stage:Stage IIA, alive, 1775 days 3096.7
L764 66 years, male, stage:Stage IIIA, alive, 1684 days 3083.8
L404 74 years, female, stage:Stage IIA, dead, 2318 days 3083.1
L735 75 years, female, stage:Stage IA, alive, 1830 days 3067.7
L602 69 years, female, stage:Stage IA, alive, 2277 days 3060.7
L867 62 years, female, stage:Stage IIIA, dead, 317 days 2880.1
L880 75 years, female, stage:Stage IA, alive, 1767 days 2739.9
L831 62 years, female, stage:Stage IB, alive, 2152 days 2681.1
L728 77 years, male, stage:Stage IIB, dead, 1128 days 2610.4
L814 73 years, male, stage:Stage IIIA, alive, 2466 days 1975.4
Show allShow less
LUNG SQUAMOUS CELL CARCINOMA (TCGA) - Interactive survival scatter ploti

The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.

The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".

Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.

Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.

& Survival analysisi

Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.

RPL10 is not prognostic in Lung Squamous Cell Carcinoma (TCGA)


Stage:


Survival analysis
Current cut offi

Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.

:
Best expression cut offi

Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .

When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.

: 4174.03
Median expressioni

Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.

: N/A
Median follow up timei

Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.

: N/A
P scorei

Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.

N/A
5-year survival highi

5-year survival for patients with higher expression than the expression cutoff.

For melanoma and glioma, 3-year survival is shown.

N/A
5-year survival lowi

5-year survival for patients with lower expression than the expression cutoff.

For melanoma and glioma, 3-year survival is shown.

N/A
TCGA RNA samplesi

RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.

Average pTPM 3636.1
Number of samples 489
Samples
Sample Description pTPM
TCGA-94-8491-01A 73 years, male, white, stage:Stage IIA, alive, 810 days 17711.9
TCGA-77-7138-01A 67 years, male, stage:Stage IB, dead, 340 days 12451.1
TCGA-O2-A5IB-01A 71 years, female, white, stage:Stage III, dead, 340 days 9145.5
TCGA-37-4135-01A 68 years, male, white, stage:Stage IB, alive, 207 days 8548.9
TCGA-60-2716-01A 39 years, male, stage:Stage IIB, alive, 1475 days 8329.8
TCGA-33-4566-01A 40 years, male, white, stage:Stage IB, dead, 5287 days 8045.4
TCGA-NC-A5HH-01A 53 years, male, white, stage:Stage IA, alive, 37 days 7676.8
TCGA-33-4532-01A 68 years, male, white, stage:Stage IB, dead, 3924 days 7499.6
TCGA-90-A4EE-01A 53 years, male, white, stage:Stage IIA, alive, 688 days 7494.5
TCGA-22-5480-01A 66 years, female, white, stage:Stage IA, dead, 2170 days 7492.6
TCGA-66-2758-01A 71 years, male, stage:Stage IB, alive, 639 days 6974.7
TCGA-77-8144-01A 70 years, male, stage:Stage IB, alive, 833 days 6953.9
TCGA-33-4533-01A 76 years, female, black or african american, stage:Stage IB, alive, 4068 days 6947.9
TCGA-O2-A52Q-01A 44 years, female, white, stage:Stage III, dead, 113 days 6817.0
TCGA-22-4593-01A 77 years, male, white, stage:Stage IIA, dead, 1067 days 6772.6
TCGA-21-1080-01A 66 years, male, white, stage:Stage IB, alive, 3724 days 6561.9
TCGA-39-5028-01A 75 years, male, white, stage:Stage IIIA, dead, 52 days 6482.1
TCGA-34-5231-01A 72 years, male, white, stage:Stage IA, dead, 1984 days 6432.7
TCGA-77-A5GA-01A 76 years, male, stage:Stage IB, alive, 1280 days 6379.4
TCGA-60-2708-01A 64 years, female, white, stage:Stage IIB, alive, 2447 days 6247.1
TCGA-18-3408-01A 77 years, female, white, stage:Stage IB, dead, 2304 days 6228.0
TCGA-22-5477-01A 65 years, male, white, stage:Stage IA, dead, 1346 days 6174.3
TCGA-66-2795-01A 68 years, male, stage:Stage IIIB, alive, 122 days 6149.6
TCGA-66-2734-01A 62 years, female, stage:Stage IB, alive, 1311 days 6100.7
TCGA-18-5595-01A 50 years, male, stage:Stage IB, dead, 827 days 6085.9
TCGA-63-A5MM-01A 69 years, female, stage:Stage IIB, dead, 456 days 6054.9
TCGA-70-6723-01A 65 years, male, asian, stage:Stage IIA, alive, 375 days 6024.6
TCGA-33-4547-01A 68 years, male, white, stage:Stage IB, alive, 2419 days 6021.1
TCGA-22-0940-01A 71 years, male, white, stage:Stage IIA, dead, 669 days 6015.1
TCGA-66-2737-01A 72 years, male, stage:Stage IIB, alive, 61 days 6008.6
TCGA-66-2765-01A 64 years, male, stage:Stage IB, alive, 61 days 5974.1
TCGA-NC-A5HG-01A 59 years, male, white, stage:Stage IIIA, alive, 1963 days 5958.3
TCGA-21-1078-01A 77 years, male, white, stage:Stage IB, dead, 474 days 5836.6
TCGA-37-3792-01A 69 years, male, white, stage:Stage IB, alive, 12 days 5829.5
TCGA-85-8351-01A 72 years, male, white, stage:Stage IIA, alive, 510 days 5809.9
TCGA-22-5473-01A 78 years, male, white, stage:'--, dead, 1933 days 5722.9
TCGA-39-5039-01A 76 years, male, white, stage:Stage IIA, dead, 544 days 5650.9
TCGA-18-3410-01A 81 years, male, stage:Stage IIB, dead, 146 days 5605.7
TCGA-46-6026-01A 81 years, male, white, stage:Stage IIB, alive, 423 days 5580.3
TCGA-77-7142-01A 59 years, female, white, stage:Stage IB, alive, 2227 days 5575.4
TCGA-85-6175-01A 63 years, female, white, stage:Stage IIB, dead, 294 days 5530.6
TCGA-66-2754-01A 67 years, male, stage:Stage IIIA, alive, 61 days 5527.3
TCGA-85-A4PA-01A 61 years, male, white, stage:Stage IB, alive, 741 days 5499.2
TCGA-39-5035-01A 72 years, female, white, stage:Stage IA, alive, 2080 days 5469.3
TCGA-43-5670-01A 70 years, male, white, stage:Stage IIA, alive, 849 days 5399.6
TCGA-NC-A5HN-01A 77 years, male, white, stage:Stage IIA, alive, 1499 days 5382.1
TCGA-66-2794-01A 64 years, male, stage:Stage IIIB, alive, 1645 days 5373.4
TCGA-18-3421-01A 65 years, male, white, stage:Stage IB, alive, 2645 days 5352.6
TCGA-85-A4QR-01A 67 years, male, white, stage:Stage IB, alive, 600 days 5322.4
TCGA-NK-A5D1-01A 57 years, male, white, stage:Stage IIA, alive, 511 days 5311.7
TCGA-66-2766-01A 54 years, male, stage:Stage IIIA, alive, 31 days 5266.8
TCGA-85-8070-01A 71 years, male, white, stage:Stage IB, alive, 960 days 5260.1
TCGA-43-7656-01A 71 years, male, white, stage:Stage IA, alive, 596 days 5227.7
TCGA-90-7767-01A 56 years, male, white, stage:Stage IIB, alive, 89 days 5225.9
TCGA-56-7222-01A 60 years, male, white, stage:Stage IB, dead, 562 days 5189.6
TCGA-43-6770-01A 59 years, female, black or african american, stage:Stage IB, alive, 653 days 5158.7
TCGA-22-4604-01A 73 years, male, white, stage:Stage IIA, dead, 399 days 5155.7
TCGA-68-7756-01A 84 years, male, white, stage:Stage IIIA, alive, 202 days 5120.9
TCGA-46-3769-01A 57 years, male, white, stage:'--, alive, 135 days 5116.8
TCGA-22-1017-01A 62 years, male, white, stage:Stage IA, dead, 1485 days 5110.4
TCGA-43-A474-01A 66 years, male, white, stage:Stage IIA, alive, 353 days 5095.7
TCGA-56-8201-01A 74 years, male, white, stage:Stage IIB, dead, 397 days 5058.3
TCGA-37-3789-01A 65 years, male, white, stage:Stage IB, alive, 13 days 5056.4
TCGA-39-5016-01A 44 years, male, white, stage:Stage IIA, alive, 3850 days 5036.9
TCGA-18-3409-01A 74 years, male, white, stage:Stage IA, alive, 3747 days 5015.9
TCGA-68-8251-01A 78 years, male, white, stage:Stage IB, alive, 406 days 4990.5
TCGA-98-8023-01A 70 years, male, white, stage:Stage IIIA, alive, 649 days 4971.6
TCGA-66-2785-01A 65 years, male, stage:Stage IB, alive, 60 days 4928.5
TCGA-60-2698-01A 62 years, male, white, stage:Stage IIB, dead, 311 days 4905.9
TCGA-51-4080-01A 65 years, male, black or african american, stage:Stage IIIB, dead, 12 days 4888.7
TCGA-18-3415-01A 77 years, male, stage:Stage IB, dead, 2803 days 4877.4
TCGA-66-2782-01A 71 years, male, stage:Stage IIB, dead, 365 days 4876.7
TCGA-66-2763-01A 63 years, female, stage:Stage IB, alive, 30 days 4876.4
TCGA-60-2723-01A 74 years, female, white, stage:Stage IB, alive, 1092 days 4874.4
TCGA-22-4607-01A 75 years, male, white, stage:Stage IB, dead, 587 days 4872.3
TCGA-85-A5B5-01A 58 years, male, white, stage:Stage IA, alive, 111 days 4837.5
TCGA-63-A5MW-01A 76 years, male, stage:Stage IB, alive, 1639 days 4835.5
TCGA-60-2711-01A 64 years, female, white, stage:Stage IB, alive, 1260 days 4833.0
TCGA-77-8009-01A 68 years, male, stage:Stage IIB, dead, 1695 days 4831.3
TCGA-92-8064-01A 58 years, male, white, stage:'--, alive, 160 days 4805.7
TCGA-39-5037-01A 65 years, male, white, stage:Stage IIA, alive, 1690 days 4762.9
TCGA-37-4133-01A 63 years, male, white, stage:Stage IIIA, alive, 238 days 4762.5
TCGA-52-7810-01A 60 years, female, white, stage:Stage IIB, alive, 923 days 4735.7
TCGA-34-2600-01A 76 years, female, white, stage:Stage IA, dead, 1874 days 4732.2
TCGA-63-A5MT-01A 74 years, male, stage:Stage IIB, alive, 498 days 4707.9
TCGA-52-7809-01A 74 years, male, white, stage:Stage IB, dead, 166 days 4695.9
TCGA-63-A5MB-01A 62 years, male, stage:Stage IB, alive, 3123 days 4695.1
TCGA-77-A5G3-01A 63 years, male, stage:Stage IIB, alive, 4570 days 4657.3
TCGA-52-7812-01A 68 years, male, white, stage:'--, dead, 835 days 4640.1
TCGA-60-2720-01A 60 years, female, white, stage:Stage IB, alive, 97 days 4632.5
TCGA-66-2780-01A 65 years, male, stage:Stage IB, dead, 366 days 4632.3
TCGA-34-7107-01A 70 years, male, white, stage:Stage II, dead, 34 days 4628.8
TCGA-85-8353-01A 72 years, male, white, stage:Stage IIIA, dead, 94 days 4605.1
TCGA-66-2786-01A 68 years, female, stage:Stage IA, alive, 790 days 4602.0
TCGA-85-A510-01A 74 years, female, white, stage:Stage IIB, alive, 482 days 4588.6
TCGA-34-8456-01A 71 years, female, white, stage:Stage IIA, alive, 804 days 4565.7
TCGA-33-6737-01A 71 years, male, white, stage:Stage IIIA, dead, 601 days 4559.3
TCGA-LA-A446-01A 68 years, male, white, stage:Stage IA, alive, 401 days 4549.1
TCGA-34-5240-01A 73 years, female, white, stage:Stage IIB, alive, 1541 days 4545.3
TCGA-56-8624-01A 84 years, male, white, stage:Stage IIB, alive, 420 days 4538.7
TCGA-NC-A5HQ-01A 70 years, male, white, stage:Stage IIIA, dead, 448 days 4526.0
TCGA-22-5471-01A 75 years, male, white, stage:Stage IB, alive, 1845 days 4513.3
TCGA-56-5898-01A 69 years, male, white, stage:Stage IA, alive, 555 days 4494.9
TCGA-18-3411-01A 63 years, female, stage:Stage IIIA, alive, 3576 days 4482.3
TCGA-LA-A7SW-01A 71 years, male, black or african american, stage:Stage IIIA, dead, 408 days 4457.6
TCGA-22-5483-01A 74 years, male, white, stage:Stage IIA, dead, 573 days 4429.8
TCGA-77-8131-01A 72 years, male, stage:Stage IB, dead, 383 days 4427.2
TCGA-56-6545-01A 77 years, female, white, stage:Stage IB, alive, 666 days 4421.5
TCGA-66-2742-01A 70 years, male, stage:Stage IV, alive, 641 days 4416.7
TCGA-39-5011-01A 70 years, female, white, stage:Stage IA, alive, 4053 days 4378.7
TCGA-98-A539-01A 63 years, male, white, stage:Stage IIB, alive, 173 days 4373.0
TCGA-90-A4ED-01A 69 years, male, white, stage:Stage IB, alive, 615 days 4365.1
TCGA-18-3417-01A 65 years, male, stage:Stage IV, dead, 1097 days 4355.7
TCGA-66-2800-01A 70 years, male, stage:Stage IIIB, alive, 1492 days 4355.2
TCGA-66-2778-01A 68 years, female, stage:Stage IIIB, alive, 578 days 4348.3
TCGA-34-5234-01A 71 years, female, white, stage:Stage IA, alive, 2271 days 4340.1
TCGA-43-8116-01A 73 years, male, white, stage:Stage IA, alive, 358 days 4329.4
TCGA-21-1077-01A 64 years, male, white, stage:Stage IIB, dead, 1058 days 4305.4
TCGA-66-2756-01A 68 years, male, stage:Stage IIIB, alive, 30 days 4284.3
TCGA-66-2769-01A 75 years, male, stage:Stage IIIB, dead, 215 days 4280.9
TCGA-90-6837-01A 64 years, male, white, stage:Stage IIB, alive, 758 days 4277.2
TCGA-46-3766-01A 62 years, female, white, stage:Stage IA, alive, 370 days 4266.4
TCGA-46-3767-01A 76 years, male, white, stage:Stage IA, alive, 396 days 4264.7
TCGA-66-2792-01A 58 years, male, stage:Stage IIB, alive, 913 days 4251.0
TCGA-85-8071-01A 52 years, male, white, stage:Stage IIA, alive, 815 days 4247.8
TCGA-22-5481-01A 72 years, female, white, stage:Stage IIB, dead, 2409 days 4247.7
TCGA-66-2771-01A 60 years, male, stage:Stage IIB, alive, 578 days 4247.6
TCGA-90-7769-01A 55 years, male, white, stage:Stage IIB, alive, 358 days 4222.5
TCGA-34-5928-01A 83 years, female, white, stage:Stage IIB, alive, 1196 days 4200.6
TCGA-22-5472-01A 67 years, male, white, stage:Stage IB, dead, 1975 days 4182.2
TCGA-21-1075-01A 57 years, male, white, stage:Stage IIB, alive, 2134 days 4176.5
TCGA-63-7023-01A male, stage:Stage IIA, alive, 1682 days 4174.0
TCGA-98-A53D-01A 68 years, male, white, stage:Stage IIB, dead, 645 days 4169.5
TCGA-77-6845-01A 69 years, male, white, stage:Stage IIB, dead, 708 days 4166.8
TCGA-56-1622-01A 58 years, male, white, stage:Stage IB, dead, 881 days 4151.4
TCGA-56-8307-01A 55 years, female, white, stage:Stage IIB, alive, 818 days 4146.9
TCGA-77-8128-01A 60 years, male, stage:Stage IIIA, dead, 1150 days 4145.7
TCGA-85-A4QQ-01A 68 years, male, white, stage:Stage IB, dead, 927 days 4124.4
TCGA-46-3768-01A 58 years, male, white, stage:Stage IIIA, dead, 299 days 4121.3
TCGA-77-7140-01A 69 years, female, white, stage:Stage IIB, dead, 632 days 4119.1
TCGA-37-4141-01A 65 years, female, white, stage:Stage IA, alive, 12 days 4081.5
TCGA-96-A4JK-01A 65 years, male, white, stage:Stage IIA, alive, 589 days 4078.5
TCGA-37-4129-01A 52 years, female, white, stage:Stage IA, alive, 242 days 4068.8
TCGA-85-8354-01A 53 years, male, white, stage:Stage IB, alive, 995 days 4055.2
TCGA-77-A5G6-01A 66 years, male, stage:Stage IIIA, dead, 678 days 4045.0
TCGA-37-5819-01A 64 years, male, white, stage:Stage IIIA, alive, 103 days 4044.4
TCGA-56-7580-01A 84 years, male, white, stage:Stage IB, alive, 925 days 4029.6
TCGA-66-2781-01A 67 years, male, stage:Stage IB, alive, 121 days 4012.5
TCGA-94-A5I4-01A 61 years, male, white, stage:Stage IIA, alive, 491 days 4003.9
TCGA-58-8386-01A 75 years, male, stage:Stage IV, dead, 1 days 3999.4
TCGA-77-7139-01A 56 years, male, white, stage:Stage IIB, alive, 4261 days 3979.6
TCGA-77-6842-01A 79 years, male, white, stage:Stage IIB, dead, 899 days 3978.6
TCGA-22-A5C4-01A 70 years, male, white, stage:Stage IIA, alive, 671 days 3978.0
TCGA-96-7545-01A 73 years, male, white, stage:Stage IA, dead, 1736 days 3945.0
TCGA-56-7730-01A 73 years, male, white, stage:Stage IIA, dead, 198 days 3944.8
TCGA-43-A475-01A 67 years, female, white, stage:Stage IIB, alive, 296 days 3941.9
TCGA-21-5786-01A 64 years, male, white, stage:Stage IB, alive, 1032 days 3941.2
TCGA-60-2709-01A 69 years, male, black or african american, stage:Stage IB, alive, 1505 days 3923.4
TCGA-37-4130-01A 56 years, male, white, stage:Stage IA, alive, 247 days 3918.7
TCGA-66-2793-01A 68 years, male, stage:Stage IIIB, dead, 306 days 3915.8
TCGA-85-8352-01A 67 years, male, white, stage:Stage IIIA, dead, 161 days 3906.4
TCGA-43-3394-01A 52 years, male, black or african american, stage:Stage IB, dead, 1190 days 3895.7
TCGA-22-5479-01A 64 years, male, white, stage:Stage IB, dead, 2625 days 3881.7
TCGA-NC-A5HL-01A 73 years, male, white, stage:Stage IIA, dead, 88 days 3869.9
TCGA-66-2753-01A 69 years, male, stage:Stage IB, alive, 31 days 3866.6
TCGA-85-7698-01A 48 years, male, white, stage:Stage IA, alive, 952 days 3861.4
TCGA-18-3412-01A 52 years, male, white, stage:Stage IB, dead, 345 days 3857.1
TCGA-66-2767-01A 62 years, male, stage:Stage IIIB, alive, 61 days 3853.0
TCGA-94-7943-01A 80 years, male, white, stage:Stage IA, alive, 559 days 3852.6
TCGA-77-7465-01A 58 years, male, white, stage:Stage IIA, alive, 990 days 3843.4
TCGA-56-8082-01A 80 years, female, white, stage:Stage IIA, alive, 455 days 3807.4
TCGA-22-4596-01A 69 years, female, white, stage:Stage IB, dead, 17 days 3803.5
TCGA-NC-A5HF-01A 74 years, male, white, stage:Stage IIIB, dead, 138 days 3798.8
TCGA-34-8455-01A 67 years, male, white, stage:Stage IV, dead, 123 days 3789.9
TCGA-33-AASJ-01A 60 years, male, black or african american, stage:Stage IB, dead, 3600 days 3785.0
TCGA-85-8277-01A 70 years, male, white, stage:Stage IIIA, dead, 307 days 3779.1
TCGA-63-A5MP-01A 56 years, male, stage:Stage IIB, alive, 769 days 3770.9
TCGA-60-2712-01A 79 years, female, white, stage:Stage IIB, dead, 274 days 3768.8
TCGA-77-A5G1-01A 75 years, male, stage:Stage IIIA, alive, 4026 days 3759.6
TCGA-85-7843-01A 50 years, male, white, stage:Stage IIA, alive, 35 days 3753.9
TCGA-66-2768-01A 57 years, male, stage:Stage IIB, alive, 61 days 3752.4
TCGA-34-5241-01A 79 years, male, white, stage:Stage IB, dead, 515 days 3739.7
TCGA-34-A5IX-01A 80 years, male, white, stage:Stage IIB, alive, 1031 days 3732.3
TCGA-22-5478-01A 79 years, male, stage:Stage IB, dead, 24 days 3723.8
TCGA-85-8664-01A 73 years, male, white, stage:Stage IIB, dead, 550 days 3715.0
TCGA-52-7622-01A 62 years, female, white, stage:Stage IA, alive, 862 days 3709.7
TCGA-33-AASI-01A 65 years, female, black or african american, stage:Stage IIB, dead, 1344 days 3702.5
TCGA-56-8083-01A 56 years, male, white, stage:Stage IB, alive, 150 days 3700.2
TCGA-77-8136-01A 74 years, female, stage:Stage IIB, dead, 1189 days 3685.2
TCGA-33-4583-01A 73 years, male, white, stage:Stage IA, dead, 4601 days 3678.4
TCGA-56-7223-01A 66 years, male, white, stage:Stage IIIA, dead, 442 days 3662.7
TCGA-L3-A524-01A 45 years, female, white, stage:Stage IIB, dead, 490 days 3650.9
TCGA-77-8150-01A 64 years, male, stage:Stage IIIA, dead, 1655 days 3647.6
TCGA-39-5029-01A 67 years, male, white, stage:Stage IIIA, dead, 740 days 3619.2
TCGA-63-A5MY-01A 63 years, male, stage:Stage IA, alive, 1052 days 3618.4
TCGA-66-2755-01A 63 years, male, stage:Stage IB, alive, 28 days 3616.9
TCGA-58-8390-01A 70 years, male, white, stage:Stage IIA, alive, 911 days 3605.9
TCGA-46-3765-01A 59 years, female, white, stage:Stage IA, alive, 405 days 3598.7
TCGA-43-6771-01A 85 years, male, white, stage:Stage IB, dead, 166 days 3591.5
TCGA-37-4132-01A 61 years, female, white, stage:Stage IV, alive, 227 days 3576.3
TCGA-21-1072-01A 75 years, male, white, stage:Stage IB, alive, 3016 days 3571.3
TCGA-58-A46N-01A 52 years, male, white, stage:Stage IB, alive, 910 days 3566.5
TCGA-37-A5EN-01A 59 years, male, white, stage:Stage IIIB, alive, 660 days 3563.7
TCGA-66-2773-01A 69 years, male, stage:Stage IB, dead, 92 days 3563.2
TCGA-85-8479-01A 66 years, male, white, stage:Stage IA, alive, 468 days 3551.7
TCGA-37-3783-01A 51 years, male, white, stage:Stage IIIA, alive, 122 days 3549.7
TCGA-34-2596-01A 70 years, male, white, stage:Stage IIB, dead, 80 days 3545.9
TCGA-22-1000-01A 76 years, male, white, stage:Stage IB, dead, 454 days 3541.0
TCGA-39-5027-01A 73 years, male, white, stage:Stage IB, alive, 3108 days 3532.3
TCGA-66-2777-01A 71 years, male, stage:Stage IB, alive, 61 days 3532.3
TCGA-60-2725-01A 74 years, male, white, stage:Stage IB, alive, 816 days 3531.3
TCGA-58-A46M-01A 61 years, male, white, stage:Stage IIB, alive, 1072 days 3530.2
TCGA-18-3414-01A 73 years, male, asian, stage:Stage IV, dead, 716 days 3527.4
TCGA-66-2757-01A 65 years, female, stage:Stage IA, dead, 1338 days 3526.6
TCGA-77-A5FZ-01A 64 years, male, stage:Stage IIIB, dead, 3838 days 3523.2
TCGA-43-3920-01A 71 years, male, white, stage:Stage IB, alive, 1007 days 3520.1
TCGA-63-7020-01A male, stage:Stage IA, alive, 2133 days 3518.0
TCGA-90-7964-01A 70 years, male, white, stage:Stage IB, alive, 428 days 3517.5
TCGA-39-5036-01A 73 years, male, white, stage:Stage IB, alive, 2165 days 3509.4
TCGA-22-1016-01A 65 years, male, white, stage:Stage IB, dead, 822 days 3507.4
TCGA-66-2727-01A 55 years, female, stage:Stage IB, dead, 516 days 3502.9
TCGA-68-7755-01A 60 years, female, white, stage:Stage IIA, alive, 83 days 3497.8
TCGA-60-2707-01A 70 years, male, stage:Stage IB, dead, 667 days 3489.2
TCGA-63-A5MJ-01A 54 years, male, stage:Stage IIB, alive, 1824 days 3489.1
TCGA-85-A4CL-01A 65 years, male, white, stage:Stage IA, dead, 921 days 3482.6
TCGA-66-2787-01A 57 years, male, stage:Stage IA, alive, 1217 days 3479.1
TCGA-60-2697-01A 41 years, male, white, stage:Stage IIA, dead, 372 days 3477.7
TCGA-56-7582-01A 83 years, male, white, stage:Stage IB, alive, 601 days 3467.4
TCGA-98-A53H-01A 76 years, female, white, stage:Stage IA, alive, 618 days 3464.3
TCGA-63-A5MI-01A 65 years, male, stage:Stage IIIA, alive, 1784 days 3450.2
TCGA-56-8623-01A 71 years, male, white, stage:Stage IB, dead, 692 days 3447.9
TCGA-43-6143-01A 70 years, male, white, stage:Stage IB, alive, 699 days 3437.1
TCGA-77-8140-01A 66 years, female, stage:Stage IIB, dead, 351 days 3435.4
TCGA-66-2789-01A 73 years, male, stage:Stage IIIB, dead, 123 days 3433.2
TCGA-18-3416-01A 83 years, male, stage:Stage IIB, dead, 973 days 3429.4
TCGA-22-1012-01A 80 years, female, white, stage:Stage IB, dead, 429 days 3429.1
TCGA-NC-A5HJ-01A 59 years, male, white, stage:Stage IIB, dead, 418 days 3426.7
TCGA-33-4538-01A 66 years, male, white, stage:Stage IIIA, dead, 2979 days 3419.5
TCGA-56-7221-01A 79 years, male, white, stage:Stage IB, alive, 608 days 3405.5
TCGA-85-A53L-01A 63 years, male, asian, stage:Stage IIA, alive, 377 days 3390.5
TCGA-22-4594-01A 60 years, female, stage:Stage IIIA, dead, 1470 days 3386.9
TCGA-NC-A5HP-01A 69 years, male, white, stage:Stage IV, dead, 770 days 3385.1
TCGA-18-4083-01A 63 years, male, white, stage:Stage IIB, dead, 188 days 3376.2
TCGA-18-3407-01A 72 years, male, asian, stage:Stage IB, dead, 136 days 3370.4
TCGA-56-8504-01A 74 years, male, white, stage:Stage IB, alive, 510 days 3369.7
TCGA-85-A4JC-01A 84 years, male, white, stage:Stage IIA, dead, 604 days 3369.6
TCGA-85-7699-01A 73 years, male, white, stage:Stage IIIA, dead, 1001 days 3368.8
TCGA-43-8118-01A 55 years, female, white, stage:Stage IA, dead, 89 days 3362.9
TCGA-77-8154-01A 67 years, male, stage:Stage IA, alive, 1841 days 3360.0
TCGA-L3-A4E7-01A 71 years, male, white, stage:Stage IB, alive, 392 days 3358.0
TCGA-66-2744-01A 71 years, male, stage:Stage IIB, alive, 30 days 3357.1
TCGA-85-8288-01A 70 years, male, white, stage:Stage IIA, dead, 402 days 3348.2
TCGA-92-7340-01A 45 years, female, white, stage:Stage IIA, alive, 82 days 3333.0
TCGA-68-A59J-01A 74 years, female, white, stage:Stage IB, alive, 448 days 3328.3
TCGA-56-7731-01A 66 years, female, white, stage:Stage IB, dead, 3 days 3325.1
TCGA-21-5783-01A 76 years, male, white, stage:Stage IB, dead, 2680 days 3304.8
TCGA-77-8133-01A 74 years, male, stage:Stage IIA, dead, 1640 days 3303.3
TCGA-66-2783-01A 67 years, male, stage:Stage IIIB, alive, 759 days 3299.2
TCGA-18-4086-01A 64 years, male, stage:Stage IB, dead, 85 days 3293.8
TCGA-22-5482-01A 81 years, male, white, stage:Stage IB, dead, 357 days 3292.0
TCGA-18-3406-01A 67 years, male, white, stage:Stage IA, dead, 371 days 3290.2
TCGA-85-A512-01A 46 years, male, white, stage:Stage IIA, alive, 465 days 3288.2
TCGA-77-7335-01A 62 years, female, white, stage:Stage IIIB, dead, 2133 days 3273.5
TCGA-58-8393-01A 68 years, female, white, stage:Stage IB, alive, 1058 days 3272.0
TCGA-33-AASB-01A 66 years, male, black or african american, stage:Stage IB, dead, 211 days 3269.5
TCGA-18-5592-01A 57 years, male, stage:Stage IIB, alive, 1519 days 3259.3
TCGA-85-A4CN-01A 56 years, female, white, stage:Stage IIB, alive, 1038 days 3255.9
TCGA-33-4586-01A 57 years, male, white, stage:Stage IIIA, dead, 428 days 3248.1
TCGA-77-A5GF-01A 70 years, male, stage:Stage IIA, dead, 840 days 3243.4
TCGA-56-7579-01A 61 years, male, white, stage:Stage IIIA, dead, 951 days 3238.7
TCGA-66-2791-01A 66 years, male, stage:Stage IIIB, dead, 153 days 3234.9
TCGA-33-4589-01A 62 years, female, white, stage:Stage IIB, dead, 47 days 3232.7
TCGA-85-7696-01A 64 years, male, white, stage:Stage IA, alive, 1111 days 3230.9
TCGA-22-4599-01A 73 years, female, white, stage:Stage IB, dead, 1161 days 3225.3
TCGA-85-6798-01A 57 years, male, white, stage:Stage IIIA, dead, 195 days 3221.7
TCGA-34-2608-01A 84 years, male, white, stage:Stage IB, dead, 1000 days 3217.0
TCGA-22-0944-01A 61 years, male, white, stage:Stage IB, dead, 223 days 3196.7
TCGA-22-5491-01A 74 years, male, white, stage:Stage IA, dead, 1713 days 3195.5
TCGA-21-5787-01A 65 years, male, black or african american, stage:Stage IIIA, dead, 329 days 3187.8
TCGA-77-7141-01A 64 years, male, white, stage:Stage IB, alive, 15 days 3176.1
TCGA-60-2696-01A 76 years, female, black or african american, stage:Stage IIA, dead, 109 days 3169.1
TCGA-56-8629-01A 63 years, male, white, stage:Stage IIA, alive, 481 days 3165.6
TCGA-68-8250-01A 66 years, male, black or african american, stage:Stage IA, alive, 244 days 3164.9
TCGA-39-5019-01A 70 years, male, white, stage:Stage IB, alive, 3387 days 3162.4
TCGA-77-8143-01A 76 years, male, stage:Stage IIIA, dead, 803 days 3160.4
TCGA-43-A56V-01A 61 years, male, black or african american, stage:Stage IIIA, alive, 366 days 3155.7
TCGA-34-5239-01A 75 years, male, white, stage:Stage IIIA, alive, 1834 days 3145.9
TCGA-60-2713-01A 64 years, male, white, stage:Stage IB, alive, 1731 days 3144.0
TCGA-O2-A52N-01A 78 years, male, white, stage:Stage I, dead, 1006 days 3138.7
TCGA-21-1079-01A 71 years, male, white, stage:Stage IIIA, dead, 965 days 3135.1
TCGA-56-8622-01A 68 years, male, white, stage:Stage IB, alive, 55 days 3134.0
TCGA-92-8063-01A 52 years, male, white, stage:Stage IIIA, alive, 122 days 3131.9
TCGA-94-7557-01A 73 years, male, black or african american, stage:Stage IB, dead, 5 days 3126.7
TCGA-52-7811-01A 67 years, male, white, stage:Stage IB, dead, 266 days 3087.1
TCGA-22-5474-01A 74 years, male, white, stage:Stage IB, dead, 445 days 3081.8
TCGA-98-7454-01A 73 years, male, white, stage:Stage IB, alive, 652 days 3079.6
TCGA-22-1002-01A 69 years, male, white, stage:Stage IA, dead, 131 days 3075.2
TCGA-63-6202-01A male, stage:Stage IIA, alive, 1602 days 3070.3
TCGA-34-5929-01A 78 years, female, white, stage:Stage IB, dead, 151 days 3044.5
TCGA-96-7544-01A 83 years, male, white, stage:Stage IIB, dead, 2160 days 3034.0
TCGA-60-2722-01A 66 years, male, white, stage:Stage IIB, alive, 908 days 3034.0
TCGA-98-A53I-01A 64 years, male, white, stage:Stage IIA, alive, 565 days 3025.5
TCGA-51-4081-01A 55 years, male, white, stage:Stage IIB, alive, 911 days 3017.4
TCGA-98-8020-01A 56 years, female, black or african american, stage:Stage IIIA, dead, 84 days 3005.0
TCGA-56-A49D-01A 67 years, male, white, stage:Stage IIIA, alive, 637 days 3003.9
TCGA-J1-A4AH-01A 70 years, male, white, stage:Stage IIA, alive, 581 days 3000.7
TCGA-NC-A5HR-01A 75 years, female, white, stage:Stage IIA, alive, 1244 days 2998.9
TCGA-60-2695-01A 74 years, female, white, stage:Stage IB, alive, 642 days 2990.4
TCGA-60-2721-01A 73 years, male, white, stage:Stage IB, alive, 983 days 2989.8
TCGA-85-6560-01A 59 years, male, white, stage:Stage IIA, alive, 1259 days 2975.8
TCGA-22-5492-01A 73 years, female, stage:Stage IIIA, dead, 506 days 2958.8
TCGA-85-8052-01A 53 years, male, white, stage:Stage IIB, alive, 734 days 2956.1
TCGA-21-1076-01A 54 years, female, white, stage:Stage IB, alive, 1852 days 2955.7
TCGA-56-8628-01A 78 years, male, white, stage:Stage IA, alive, 616 days 2947.4
TCGA-O2-A52S-01A 57 years, female, white, stage:Stage III, dead, 387 days 2945.9
TCGA-77-8007-01A 68 years, male, stage:Stage IIB, dead, 198 days 2941.4
TCGA-22-4605-01A 78 years, female, stage:Stage IB, dead, 974 days 2926.3
TCGA-33-AASD-01A 83 years, male, black or african american, stage:Stage IA, dead, 2249 days 2924.2
TCGA-60-2706-01A 58 years, male, white, stage:Stage IA, alive, 2820 days 2923.5
TCGA-21-A5DI-01A 77 years, male, white, stage:Stage IA, alive, 979 days 2918.8
TCGA-MF-A522-01A 54 years, male, white, stage:Stage IB, dead, 360 days 2916.3
TCGA-85-8584-01A 71 years, male, white, stage:Stage IIA, dead, 383 days 2913.3
TCGA-98-A53C-01A 77 years, female, white, stage:Stage IA, alive, 822 days 2910.3
TCGA-56-A4ZJ-01A 75 years, female, white, stage:Stage IA, alive, 640 days 2909.7
TCGA-85-7950-01A 46 years, male, white, stage:Stage IB, alive, 576 days 2901.9
TCGA-43-7658-01A 75 years, female, white, stage:Stage IA, dead, 2378 days 2896.9
TCGA-NK-A5CX-01A 73 years, male, white, stage:Stage IIA, alive, 111 days 2889.2
TCGA-60-2714-01A 66 years, female, white, stage:Stage IIB, alive, 1531 days 2889.2
TCGA-39-5034-01A 73 years, female, white, stage:Stage IIB, dead, 1107 days 2887.7
TCGA-85-8580-01A 52 years, female, white, stage:Stage IB, alive, 1113 days 2872.5
TCGA-56-A5DR-01A 81 years, male, white, stage:Stage IA, alive, 4 days 2870.0
TCGA-85-8287-01A 72 years, male, white, stage:Stage IA, dead, 23 days 2868.6
TCGA-51-6867-01A 72 years, female, white, stage:Stage I, dead, 1856 days 2867.0
TCGA-94-8035-01A 64 years, male, white, stage:Stage IIB, alive, 122 days 2859.5
TCGA-NC-A5HD-01A 79 years, male, white, stage:Stage IIB, dead, 2 days 2854.4
TCGA-77-8156-01A 60 years, male, stage:Stage IB, alive, 1106 days 2850.6
TCGA-NK-A5CT-01A 70 years, male, white, stage:Stage IA, alive, 1997 days 2847.8
TCGA-77-8148-01A 68 years, male, stage:Stage IIIA, alive, 2023 days 2844.4
TCGA-60-2715-01A 51 years, male, white, stage:Stage IA, dead, 1075 days 2840.3
TCGA-22-4591-01A 80 years, male, white, stage:Stage IIIA, dead, 623 days 2837.5
TCGA-34-5236-01A 60 years, male, white, stage:Stage IIB, dead, 276 days 2836.4
TCGA-96-A4JL-01A 78 years, female, asian, stage:Stage IIA, alive, 842 days 2834.5
TCGA-22-4609-01A 81 years, male, white, stage:Stage IA, dead, 291 days 2824.9
TCGA-56-8626-01A 59 years, male, white, stage:Stage IA, dead, 302 days 2816.3
TCGA-34-5232-01A 75 years, female, black or african american, stage:Stage IIA, alive, 2471 days 2812.4
TCGA-85-8072-01A 60 years, male, white, stage:Stage IA, alive, 932 days 2806.9
TCGA-77-8138-01A 74 years, male, stage:Stage IB, dead, 539 days 2806.8
TCGA-90-A59Q-01A 61 years, female, white, stage:Stage IIA, dead, 322 days 2806.4
TCGA-43-7657-01A 68 years, female, white, stage:Stage IA, alive, 236 days 2780.0
TCGA-60-2724-01A 47 years, male, white, stage:Stage IIIA, alive, 717 days 2778.2
TCGA-85-6561-01A 66 years, male, white, stage:Stage IB, alive, 1224 days 2776.9
TCGA-56-8503-01A 76 years, female, white, stage:Stage IIB, alive, 41 days 2773.4
TCGA-22-5489-01A 64 years, male, white, stage:Stage IA, dead, 1912 days 2772.8
TCGA-22-4613-01A 73 years, female, white, stage:Stage IA, dead, 358 days 2772.6
TCGA-NC-A5HK-01A 58 years, female, white, stage:Stage IIB, alive, 128 days 2766.7
TCGA-43-8115-01A 72 years, female, white, stage:Stage IIA, alive, 407 days 2758.1
TCGA-66-2770-01A 79 years, male, stage:Stage IB, alive, 700 days 2758.1
TCGA-77-7338-01A 64 years, male, white, stage:Stage IB, dead, 5 days 2757.8
TCGA-66-2790-01A 72 years, male, stage:Stage IIB, alive, 699 days 2757.1
TCGA-63-A5ML-01A 68 years, male, stage:Stage IB, alive, 1386 days 2752.4
TCGA-85-7697-01A 49 years, male, white, stage:Stage IIB, alive, 1063 days 2748.3
TCGA-21-1070-01A 60 years, female, black or african american, stage:Stage IIIA, alive, 3636 days 2746.6
TCGA-66-2788-01A 56 years, male, stage:Stage IB, alive, 699 days 2745.4
TCGA-77-7463-01A 75 years, male, white, stage:Stage IB, dead, 1423 days 2734.0
TCGA-63-A5MH-01A 68 years, male, stage:Stage IA, alive, 2026 days 2722.4
TCGA-22-5485-01A 58 years, female, white, stage:Stage IA, dead, 916 days 2711.1
TCGA-85-8355-01A 63 years, male, white, stage:Stage IA, alive, 61 days 2693.4
TCGA-85-8049-01A 57 years, male, white, stage:Stage IB, alive, 579 days 2681.0
TCGA-51-4079-01A 73 years, female, black or african american, stage:Stage IB, dead, 12 days 2679.0
TCGA-77-8130-01A 69 years, male, stage:Stage IIB, alive, 4765 days 2655.8
TCGA-94-A5I6-01A 62 years, male, white, stage:Stage IIB, alive, 538 days 2655.0
TCGA-85-7710-01A 59 years, female, white, stage:Stage IA, alive, 42 days 2648.9
TCGA-56-8304-01A 73 years, female, white, stage:Stage IA, alive, 106 days 2647.2
TCGA-NK-A5CR-01A 77 years, male, stage:Stage IB, alive, 2542 days 2638.6
TCGA-33-AAS8-01A 59 years, female, black or african american, stage:Stage IA, dead, 1114 days 2636.3
TCGA-96-8169-01A 67 years, female, white, stage:Stage IA, alive, 557 days 2631.4
TCGA-39-5021-01A 70 years, male, white, stage:Stage IB, dead, 2086 days 2625.6
TCGA-O2-A52V-01A 75 years, female, black or african american, stage:Stage II, dead, 1335 days 2621.9
TCGA-85-8666-01A 65 years, male, white, stage:Stage IB, dead, 687 days 2614.6
TCGA-39-5031-01A 76 years, female, stage:Stage IA, dead, 1841 days 2611.5
TCGA-43-2578-01A 59 years, female, white, stage:Stage IA, dead, 684 days 2609.5
TCGA-60-2704-01A 73 years, male, white, stage:Stage IIB, dead, 1154 days 2607.7
TCGA-77-8139-01A 72 years, male, stage:Stage IIB, alive, 3166 days 2591.9
TCGA-77-A5GH-01A 81 years, male, stage:Stage IB, alive, 1182 days 2588.2
TCGA-37-A5EM-01A 49 years, male, white, stage:Stage II, alive, 867 days 2570.8
TCGA-NC-A5HI-01A 68 years, female, white, stage:Stage IB, alive, 1743 days 2570.0
TCGA-NC-A5HO-01A 70 years, female, white, stage:Stage IIIA, alive, 1336 days 2569.1
TCGA-85-A511-01A 62 years, male, white, stage:Stage IIB, dead, 455 days 2560.4
TCGA-NC-A5HT-01A 69 years, male, white, stage:Stage IIIA, alive, 804 days 2550.5
TCGA-77-8008-01A 68 years, male, stage:Stage IB, dead, 2639 days 2547.6
TCGA-33-4587-01A 63 years, female, white, stage:Stage IB, dead, 1656 days 2547.3
TCGA-58-8388-01A 60 years, male, white, stage:Stage IB, dead, 412 days 2538.4
TCGA-58-A46L-01A 73 years, male, white, stage:Stage IIIA, alive, 1723 days 2535.3
TCGA-43-2576-01A 62 years, female, white, stage:Stage IIIA, alive, 1223 days 2534.8
TCGA-85-8350-01A 61 years, male, white, stage:Stage IA, alive, 683 days 2534.2
TCGA-18-4721-01A 74 years, male, white, stage:Stage IA, alive, 4694 days 2526.6
TCGA-22-4595-01A 57 years, male, white, stage:Stage IIIA, dead, 734 days 2515.4
TCGA-77-7337-01A 65 years, male, white, stage:Stage IIB, dead, 3253 days 2508.9
TCGA-98-8022-01A 61 years, male, white, stage:Stage IA, dead, 933 days 2503.5
TCGA-85-8048-01A 62 years, male, white, stage:Stage IA, alive, 765 days 2502.2
TCGA-92-7341-01A 71 years, male, white, stage:Stage IB, alive, 106 days 2496.8
TCGA-85-A50M-01A 47 years, male, asian, stage:Stage IIA, dead, 826 days 2495.2
TCGA-34-8454-01A 62 years, female, white, stage:Stage IIIA, alive, 1180 days 2493.8
TCGA-85-A4JB-01A 74 years, male, white, stage:Stage IIB, alive, 942 days 2481.9
TCGA-56-8625-01A 66 years, female, white, stage:Stage IIIA, dead, 315 days 2476.6
TCGA-21-1082-01A 61 years, male, white, stage:Stage IB, alive, 3644 days 2473.3
TCGA-43-5668-01A 78 years, male, white, stage:Stage IIA, dead, 559 days 2467.4
TCGA-56-8308-01A 79 years, male, white, stage:Stage IIB, alive, 517 days 2459.9
TCGA-96-8170-01A 75 years, female, white, stage:Stage IIA, alive, 531 days 2446.0
TCGA-58-A46J-01A 64 years, male, white, stage:Stage IIB, alive, 2589 days 2440.0
TCGA-60-2703-01A 73 years, male, white, stage:Stage IIB, dead, 2945 days 2423.2
TCGA-77-6843-01A 74 years, male, white, stage:Stage IIA, dead, 2224 days 2422.4
TCGA-63-7022-01A female, stage:Stage IA, alive, 2073 days 2421.8
TCGA-85-8582-01A 49 years, male, white, stage:Stage IA, alive, 1160 days 2419.6
TCGA-70-6722-01A 47 years, male, asian, stage:Stage IIIA, alive, 367 days 2415.7
TCGA-92-8065-01A 74 years, female, white, stage:Stage IIB, alive, 70 days 2410.8
TCGA-39-5022-01A 76 years, male, white, stage:Stage IB, dead, 1679 days 2396.5
TCGA-68-A59I-01A 73 years, female, black or african american, stage:Stage IIIA, alive, 492 days 2393.1
TCGA-34-5927-01A 70 years, female, white, stage:Stage IA, alive, 1361 days 2392.3
TCGA-NC-A5HE-01A 60 years, male, white, stage:Stage IIB, alive, 2336 days 2388.7
TCGA-21-1071-01A 67 years, male, white, stage:Stage IB, dead, 1426 days 2386.6
TCGA-43-A56U-01A 76 years, female, white, stage:Stage IA, alive, 432 days 2385.6
TCGA-63-A5MS-01A 78 years, male, stage:Stage IB, alive, 2381 days 2381.3
TCGA-43-2581-01A 47 years, female, white, stage:Stage IIIA, alive, 1176 days 2375.0
TCGA-56-A4ZK-01A 76 years, female, white, stage:Stage IB, alive, 570 days 2370.4
TCGA-58-8392-01A 70 years, male, white, stage:Stage IB, dead, 501 days 2346.1
TCGA-58-A46K-01A 59 years, male, white, stage:Stage IIIA, dead, 1045 days 2341.5
TCGA-56-A62T-01A 78 years, male, black or african american, stage:Stage IIA, alive, 440 days 2329.0
TCGA-77-6844-01A 74 years, male, white, stage:Stage IIIA, dead, 2284 days 2325.8
TCGA-94-A4VJ-01A 71 years, female, white, stage:Stage IA, alive, 430 days 2323.6
TCGA-77-8146-01A 72 years, male, stage:Stage IA, alive, 3189 days 2322.4
TCGA-O2-A52W-01A 63 years, male, black or african american, stage:Stage I, dead, 261 days 2313.3
TCGA-33-A4WN-01A 60 years, male, white, stage:Stage IB, dead, 143 days 2309.8
TCGA-NC-A5HM-01A 76 years, male, white, stage:Stage IB, alive, 1212 days 2308.3
TCGA-XC-AA0X-01A 77 years, female, black or african american, stage:Stage IA, dead, 6 days 2306.1
TCGA-58-8387-01A 60 years, male, white, stage:Stage IIA, dead, 403 days 2303.8
TCGA-33-6738-01A 80 years, male, white, stage:Stage IIIA, alive, 1927 days 2278.1
TCGA-60-2710-01A 67 years, female, white, stage:Stage IIA, alive, 2024 days 2269.3
TCGA-63-A5MN-01A 78 years, female, stage:Stage IIB, dead, 345 days 2268.5
TCGA-66-2759-01A 66 years, male, stage:Stage IIIA, alive, 762 days 2262.5
TCGA-39-5024-01A 65 years, female, white, stage:Stage IIIA, alive, 2510 days 2256.3
TCGA-33-AASL-01A 57 years, female, black or african american, stage:Stage IA, dead, 826 days 2253.0
TCGA-63-7021-01A male, stage:Stage IA, alive, 2142 days 2211.6
TCGA-33-4582-01A 55 years, male, white, stage:Stage IA, dead, 3149 days 2202.7
TCGA-56-A4BY-01A 66 years, male, white, stage:Stage IB, dead, 543 days 2175.8
TCGA-NK-A7XE-01A 66 years, male, black or african american, stage:Stage IIIB, alive, 13 days 2171.4
TCGA-77-8145-01A 73 years, male, stage:Stage IIIB, dead, 212 days 2159.7
TCGA-56-A5DS-01A 72 years, female, white, stage:Stage IB, alive, 8 days 2133.6
TCGA-85-7844-01A 71 years, male, white, stage:Stage IB, alive, 911 days 2096.7
TCGA-63-A5MR-01A 70 years, female, stage:Stage IB, alive, 2716 days 2091.3
TCGA-22-4601-01A 73 years, female, white, stage:Stage IIIA, dead, 1057 days 2079.2
TCGA-56-A4BX-01A 70 years, male, white, stage:Stage IIA, alive, 405 days 2068.7
TCGA-98-A53B-01A 69 years, male, white, stage:Stage IB, dead, 61 days 2055.4
TCGA-85-8481-01A 70 years, male, white, stage:Stage IIB, dead, 236 days 2052.3
TCGA-56-8309-01A 66 years, male, white, stage:Stage IA, alive, 428 days 2044.2
TCGA-21-5784-01A 80 years, female, white, stage:Stage IB, alive, 1268 days 2040.4
TCGA-85-8276-01A 62 years, male, white, stage:Stage IIA, alive, 1050 days 2026.1
TCGA-94-8490-01A 70 years, male, white, stage:Stage IIB, alive, 153 days 2026.1
TCGA-56-8305-01A 72 years, male, white, stage:Stage IB, alive, 105 days 2012.5
TCGA-60-2726-01A 56 years, male, white, stage:Stage IIA, dead, 358 days 2004.8
TCGA-98-8021-01A 75 years, female, white, stage:Stage IA, alive, 937 days 2003.3
TCGA-21-5782-01A 68 years, female, white, stage:Stage IB, dead, 962 days 1999.1
TCGA-21-1083-01A 75 years, male, white, stage:Stage IA, dead, 1315 days 1986.7
TCGA-56-5897-01A 74 years, male, white, stage:Stage IA, alive, 378 days 1985.9
TCGA-37-A5EL-01A 53 years, male, white, stage:Stage IIB, dead, 1143 days 1974.8
TCGA-85-A513-01A 60 years, female, asian, stage:Stage IA, alive, 910 days 1957.3
TCGA-22-1005-01A 63 years, male, white, stage:Stage IA, dead, 1953 days 1939.6
TCGA-90-7766-01A 66 years, female, white, stage:Stage IA, alive, 289 days 1933.6
TCGA-63-A5MG-01A 68 years, male, stage:Stage IB, alive, 2148 days 1932.6
TCGA-98-A538-01A 67 years, male, white, stage:Stage IIB, alive, 826 days 1917.5
TCGA-46-6025-01A 71 years, male, white, stage:Stage IIB, alive, 324 days 1907.4
TCGA-18-3419-01A 73 years, male, stage:Stage IIB, alive, 2811 days 1895.3
TCGA-43-6647-01A 69 years, female, white, stage:Stage IIB, alive, 757 days 1833.4
TCGA-85-A50Z-01A 57 years, male, white, stage:Stage IIA, alive, 493 days 1830.2
TCGA-22-1011-01A 73 years, male, white, stage:Stage IB, dead, 53 days 1819.7
TCGA-33-A5GW-01A 67 years, male, white, stage:Stage IIA, dead, 9 days 1797.0
TCGA-60-2719-01A 83 years, female, white, stage:Stage IB, alive, 1297 days 1796.8
TCGA-21-1081-01A 69 years, male, white, stage:Stage IIB, dead, 284 days 1737.6
TCGA-56-A4BW-01A 55 years, male, white, stage:Stage IIA, alive, 585 days 1688.0
TCGA-98-A53A-01A 70 years, male, black or african american, stage:Stage IB, dead, 552 days 1652.4
TCGA-63-A5MV-01A 69 years, male, stage:Stage IIA, alive, 1100 days 1581.5
TCGA-77-8153-01A 77 years, female, stage:Stage IB, alive, 1992 days 1564.7
TCGA-58-8391-01A 57 years, female, white, stage:Stage IIIA, alive, 2167 days 1560.6
TCGA-94-7033-01A 73 years, male, white, stage:Stage IB, alive, 640 days 1552.8
TCGA-39-5030-01A 81 years, female, asian, stage:Stage IIIA, dead, 59 days 1540.8
TCGA-98-A53J-01A 77 years, male, white, stage:Stage IB, alive, 630 days 1538.2
TCGA-39-5040-01A 59 years, male, white, stage:Stage IIIA, dead, 519 days 1498.6
TCGA-56-7822-01A 75 years, male, black or african american, stage:Stage IIB, dead, 532 days 1496.2
TCGA-43-6773-01A 76 years, male, white, stage:Stage IIB, dead, 116 days 1461.4
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LUNG SQUAMOUS CELL CARCINOMA (VALIDATION) - Interactive survival scatter ploti

The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.

The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".

Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.

Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.

& Survival analysisi

Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.

RPL10 is not prognostic in Lung Squamous Cell Carcinoma (validation)


Stage:

Survival analysis
Current cut offi

Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.

:
Best expression cut offi

Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .

When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.

: 4191.46
Median expressioni

Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.

: N/A
Median follow up timei

Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.

: N/A
P scorei

Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.

N/A
5-year survival highi

5-year survival for patients with higher expression than the expression cutoff.

For melanoma and glioma, 3-year survival is shown.

N/A
5-year survival lowi

5-year survival for patients with lower expression than the expression cutoff.

For melanoma and glioma, 3-year survival is shown.

N/A
TCGA RNA samplesi

RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.

Average pTPM 3707.3
Number of samples 68
Samples
Sample Description pTPM
L459 75 years, male, stage:Stage IIA, alive, 3181 days 8861.5
L592 61 years, male, stage:Stage IB, alive, 2368 days 7191.4
L650 69 years, female, stage:Stage IB, dead, 986 days 5779.4
L586 67 years, male, stage:Stage IIA, dead, 784 days 5673.5
L539 78 years, male, stage:Stage IB, dead, 370 days 5073.3
L466 65 years, female, stage:Stage IIIA, dead, 412 days 5066.8
L568 77 years, female, stage:Stage IIB, dead, 71 days 5019.6
L860 77 years, male, stage:Stage IA, alive, 2056 days 5018.8
L739 49 years, female, stage:Stage IIIA, dead, 352 days 4963.9
L824 70 years, male, stage:Stage IA, dead, 665 days 4863.3
L604 67 years, male, stage:Stage IIA, dead, 286 days 4686.3
L420 57 years, female, stage:Stage IIB, dead, 295 days 4684.7
L447 67 years, male, stage:Stage IIB, alive, 3203 days 4672.6
L818 67 years, male, stage:Stage IB, alive, 2480 days 4656.4
L642 67 years, male, stage:Stage IB, dead, 1167 days 4554.9
L753 61 years, male, stage:Stage IIA, alive, 1705 days 4484.0
L723 67 years, male, stage:Stage IIA, dead, 433 days 4444.7
L712 61 years, male, stage:Stage IA, alive, 1698 days 4372.1
L881 70 years, male, stage:Stage IB, alive, 1752 days 4279.9
L852 64 years, male, stage:Stage IB, dead, 700 days 4255.4
L483 65 years, male, stage:Stage IB, dead, 77 days 4237.6
L820 73 years, female, stage:Stage IA, alive, 2405 days 4145.3
L468 53 years, male, stage:Stage IB, alive, 3004 days 4081.9
L563 61 years, female, stage:Stage IIB, dead, 1216 days 3997.4
L655 62 years, male, stage:Stage IIA, dead, 1603 days 3864.8
L496 77 years, male, stage:Stage IB, alive, 2761 days 3829.4
L457 46 years, female, stage:Stage IIA, alive, 2901 days 3817.3
L488 61 years, female, stage:Stage IIA, alive, 2993 days 3807.7
L608 73 years, male, stage:Stage IA, alive, 2350 days 3803.5
L644 67 years, male, stage:Stage IA, dead, 282 days 3691.9
L886 71 years, male, stage:Stage IB, dead, 1932 days 3640.9
L661 66 years, male, stage:Stage IA, dead, 1123 days 3594.5
L715 69 years, female, stage:Stage IIIA, dead, 150 days 3581.7
L452 62 years, male, stage:Stage IIIA, dead, 3115 days 3553.9
L744 75 years, male, stage:Stage IA, alive, 1614 days 3553.6
L559 72 years, male, stage:Stage IIB, alive, 2615 days 3531.4
L444 74 years, female, stage:Stage IIB, alive, 3337 days 3443.3
L747 74 years, female, stage:Stage IA, dead, 1112 days 3376.0
L464 66 years, male, stage:Stage IB, dead, 1935 days 3325.0
L406 64 years, male, stage:Stage IA, alive, 3057 days 3237.0
L788 54 years, female, stage:Stage IA, alive, 3385 days 3140.3
L856 69 years, male, stage:Stage IA, dead, 1465 days 3123.6
L472 71 years, male, stage:Stage IB, dead, 423 days 3119.6
L736 67 years, male, stage:Stage IA, dead, 1195 days 3017.0
L490 58 years, male, stage:Stage IA, dead, 716 days 2989.9
L633 77 years, female, stage:Stage IA, alive, 2102 days 2979.3
L534 66 years, male, stage:Stage IIA, alive, 2693 days 2947.8
L470 78 years, female, stage:Stage IB, dead, 1774 days 2946.5
L456 48 years, male, stage:Stage IIA, dead, 1660 days 2924.1
L767 67 years, male, stage:Stage IA, alive, 1718 days 2911.6
L529 79 years, female, stage:Stage IA, alive, 2775 days 2873.5
L857 69 years, male, stage:Stage IB, dead, 226 days 2862.5
L442 75 years, female, stage:Stage IB, dead, 2433 days 2847.0
L758 84 years, male, stage:Stage IA, dead, 1562 days 2843.3
L652 82 years, male, stage:Stage IA, dead, 5 days 2761.3
L756 72 years, male, stage:Stage IB, alive, 1796 days 2704.0
L755 82 years, male, stage:Stage IIA, dead, 227 days 2667.3
L658 65 years, female, stage:Stage IIB, alive, 2083 days 2633.6
L685 71 years, female, stage:Stage IIB, alive, 1944 days 2632.2
L858 69 years, female, stage:Stage IIB, dead, 558 days 2616.9
L751 59 years, female, stage:Stage IIIA, alive, 1600 days 2591.9
L817 76 years, female, stage:Stage IIIA, dead, 1279 days 2573.2
L854 62 years, female, stage:Stage IB, alive, 2256 days 2480.9
L760 80 years, male, stage:Stage IIA, alive, 1895 days 2463.2
L864 66 years, female, stage:Stage IA, alive, 2192 days 2314.5
L719 63 years, male, stage:Stage IB, alive, 1615 days 1955.3
L572 58 years, male, stage:Stage IA, alive, 2532 days 1891.3
L884 71 years, male, stage:Stage IIA, alive, 1627 days 1571.2
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LUNG ADENOCARCINOMA - Protein relative expression (CPTAC)
Number of samples 213
Samples
Sample ID Sample type nRPX
CPT0067450003 Tumor 0.6
CPT0068800003 Tumor 0.6
CPT0118340003 Tumor 0.5
CPT0113210003 Tumor 0.5
CPT0106110003 Tumor 0.5
CPT0147080004 Tumor 0.5
CPT0105060003 Tumor 0.5
CPT0105270003 Tumor 0.5
CPT0118810003 Tumor 0.4
CPT0001660013 Tumor 0.4
CPT0118620003 Tumor 0.4
CPT0092530003 Tumor 0.4
CPT0090340003 Tumor 0.4
CPT0090170004 Tumor 0.4
CPT0000920017 Tumor 0.4
CPT0001800013 Tumor 0.4
CPT0092240003 Tumor 0.3
CPT0105630003 Tumor 0.3
CPT0008450003 Tumor 0.3
CPT0114840003 Tumor 0.3
CPT0097580003 Tumor 0.3
CPT0083780003 Tumor 0.3
CPT0067070003 Tumor 0.3
CPT0091860003 Tumor 0.3
CPT0067940003 Tumor 0.3
CPT0105230003 Tumor 0.3
CPT0148180004 Tumor 0.3
CPT0146980004 Tumor 0.2
CPT0117970003 Tumor 0.2
CPT0011710004 Tumor 0.2
CPT0090570004 Tumor 0.2
CPT0090700003 Tumor 0.2
CPT0086750003 Tumor 0.2
CPT0118200003 Tumor 0.2
CPT0105940003 Tumor 0.2
CPT0084140003 Tumor 0.2
CPT0063810003 Tumor 0.2
CPT0089340003 Tumor 0.2
CPT0090860003 Tumor 0.2
CPT0105710003 Tumor 0.2
CPT0067250003 Tumor 0.2
CPT0098130003 Tumor 0.2
CPT0069700003 Tumor 0.2
CPT0001590003 Normal 0.2
CPT0125810003 Tumor 0.2
CPT0015410003 Tumor 0.2
CPT0001960003 Tumor 0.2
CPT0115070003 Tumor 0.2
CPT0091240003 Tumor 0.1
CPT0109740004 Tumor 0.1
CPT0001580009 Tumor 0.1
CPT0090900004 Normal 0.1
CPT0053040004 Tumor 0.1
CPT0001060010 Tumor 0.1
CPT0105600003 Tumor 0.1
CPT0104750003 Tumor 0.1
CPT0086320003 Normal 0.1
CPT0068100003 Tumor 0.1
CPT0014860003 Tumor 0.1
CPT0147380004 Tumor 0.1
CPT0105330003 Tumor 0.1
CPT0066780003 Tumor 0.1
CPT0070080003 Normal 0.1
CPT0147980004 Tumor 0.1
CPT0092250003 Normal 0.1
CPT0069360003 Tumor 0.1
CPT0011750003 Normal 0.1
CPT0118880003 Tumor 0.1
CPT0067470004 Normal 0.1
CPT0014930003 Normal 0.1
CPT0104630003 Tumor 0.1
CPT0146780004 Tumor 0.1
CPT0147480004 Tumor 0.1
CPT0063750003 Normal 0.1
CPT0109850003 Normal 0.1
CPT0147400003 Normal 0.1
CPT0051690004 Tumor 0.0
CPT0109680004 Tumor 0.0
CPT0146700003 Normal 0.0
CPT0105740003 Normal 0.0
CPT0067620003 Tumor 0.0
CPT0110980004 Tumor 0.0
CPT0104650003 Normal 0.0
CPT0105370004 Normal 0.0
CPT0068610003 Tumor 0.0
CPT0104970003 Tumor 0.0
CPT0063840003 Normal 0.0
CPT0125830003 Normal 0.0
CPT0092930003 Tumor 0.0
CPT0052170004 Tumor 0.0
CPT0118570003 Tumor 0.0
CPT0147900003 Normal 0.0
CPT0079830003 Tumor 0.0
CPT0105550003 Normal 0.0
CPT0083140003 Normal 0.0
CPT0070060003 Tumor 0.0
CPT0089360003 Normal 0.0
CPT0013600003 Tumor 0.0
CPT0102450003 Tumor 0.0
CPT0118240003 Normal 0.0
CPT0148300003 Normal 0.0
CPT0105510003 Tumor 0.0
CPT0147600003 Normal 0.0
CPT0090200003 Normal 0.0
CPT0063730003 Tumor 0.0
CPT0052940004 Tumor 0.0
CPT0086310003 Tumor 0.0
CPT0118890003 Normal 0.0
CPT0086770003 Normal 0.0
CPT0147000003 Normal 0.0
CPT0069370003 Normal 0.0
CPT0090720003 Normal 0.0
CPT0082850004 Tumor 0.0
CPT0113990003 Tumor 0.0
CPT0015420003 Normal 0.0
CPT0083390004 Tumor 0.0
CPT0067770003 Normal 0.0
CPT0008410003 Tumor 0.0
CPT0111590003 Normal 0.0
CPT0067290003 Normal 0.0
CPT0105250003 Normal 0.0
CPT0113220003 Normal 0.0
CPT0105010004 Normal 0.0
CPT0146800003 Normal 0.0
CPT0013630003 Normal 0.0
CPT0146880004 Tumor 0.0
CPT0083420003 Normal 0.0
CPT0082740004 Tumor -0.1
CPT0001390003 Normal -0.1
CPT0147100003 Normal -0.1
CPT0082890003 Normal -0.1
CPT0084170003 Normal -0.1
CPT0011930003 Normal -0.1
CPT0091870003 Normal -0.1
CPT0082770003 Normal -0.1
CPT0147500003 Normal -0.1
CPT0114690003 Normal -0.1
CPT0069520003 Tumor -0.1
CPT0014260003 Tumor -0.1
CPT0118160003 Tumor -0.1
CPT0011910004 Tumor -0.1
CPT0147880004 Tumor -0.1
CPT0079850003 Normal -0.1
CPT0068650003 Normal -0.1
CPT0111480003 Normal -0.1
CPT0148100003 Normal -0.1
CPT0055100004 Tumor -0.1
CPT0104760003 Normal -0.1
CPT0069550003 Normal -0.1
CPT0109760003 Normal -0.1
CPT0109830004 Tumor -0.1
CPT0001380003 Tumor -0.1
CPT0109700003 Normal -0.1
CPT0105190003 Normal -0.1
CPT0148200003 Normal -0.1
CPT0105680003 Normal -0.1
CPT0105610003 Normal -0.1
CPT0118830003 Normal -0.1
CPT0066930003 Normal -0.1
CPT0083100003 Tumor -0.1
CPT0118600003 Normal -0.1
CPT0148280004 Tumor -0.1
CPT0147580004 Tumor -0.1
CPT0114660004 Tumor -0.2
CPT0118360003 Normal -0.2
CPT0001690003 Normal -0.2
CPT0102480003 Normal -0.2
CPT0118010003 Normal -0.2
CPT0112060003 Tumor -0.2
CPT0008420003 Normal -0.2
CPT0014290003 Normal -0.2
CPT0110890003 Normal -0.2
CPT0001070003 Normal -0.2
CPT0000930003 Normal -0.2
CPT0067110003 Normal -0.2
CPT0114010003 Normal -0.2
CPT0105980003 Normal -0.2
CPT0067950003 Normal -0.2
CPT0109720004 Tumor -0.2
CPT0092940003 Normal -0.2
CPT0114880003 Normal -0.2
CPT0021450003 Tumor -0.2
CPT0118180003 Normal -0.2
CPT0090600003 Normal -0.2
CPT0023310003 Tumor -0.2
CPT0021490003 Normal -0.2
CPT0083810003 Normal -0.2
CPT0090370003 Normal -0.2
CPT0111300003 Tumor -0.2
CPT0013880003 Tumor -0.2
CPT0146680004 Tumor -0.2
CPT0148000003 Normal -0.2
CPT0110860004 Tumor -0.3
CPT0146600003 Normal -0.3
CPT0068130003 Normal -0.3
CPT0068830003 Normal -0.3
CPT0023320003 Normal -0.3
CPT0066890003 Tumor -0.3
CPT0106100003 Normal -0.3
CPT0001970003 Normal -0.3
CPT0091260003 Normal -0.3
CPT0118650003 Normal -0.3
CPT0066810003 Normal -0.3
CPT0109710003 Normal -0.3
CPT0112080003 Normal -0.3
CPT0115090003 Normal -0.3
CPT0062810003 Normal -0.4
CPT0097600003 Normal -0.4
CPT0013910003 Normal -0.4
CPT0001810003 Normal -0.4
CPT0069720003 Normal -0.4
CPT0146580004 Tumor N/A
CPT0148080004 Tumor N/A
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LUNG SQUAMOUS CELL CARCINOMA - Protein relative expression (CPTAC)
Number of samples 212
Samples
Sample ID Sample type nRPX
CPT0146380004 Tumor 0.5
CPT0237200004 Tumor 0.5
CPT0195510003 Tumor 0.5
CPT0204990003 Tumor 0.5
CPT0237690004 Tumor 0.5
CPT0191860003 Tumor 0.4
CPT0147680004 Tumor 0.4
CPT0146480004 Tumor 0.4
CPT0238110004 Tumor 0.4
CPT0079050003 Tumor 0.4
CPT0079100003 Tumor 0.4
CPT0083980003 Tumor 0.4
CPT0245830003 Tumor 0.4
CPT0218280003 Tumor 0.4
CPT0091820003 Tumor 0.4
CPT0010050003 Tumor 0.3
CPT0086260003 Tumor 0.3
CPT0197740003 Tumor 0.3
CPT0237760003 Tumor 0.3
CPT0104360003 Tumor 0.3
CPT0126670003 Tumor 0.3
CPT0068280003 Tumor 0.3
CPT0197210003 Tumor 0.3
CPT0208770003 Tumor 0.3
CPT0115830003 Tumor 0.3
CPT0197090003 Tumor 0.3
CPT0202170003 Tumor 0.3
CPT0219360003 Tumor 0.3
CPT0130030003 Tumor 0.3
CPT0236420003 Tumor 0.3
CPT0091050003 Tumor 0.3
CPT0102790003 Tumor 0.3
CPT0245780003 Tumor 0.3
CPT0192540004 Tumor 0.3
CPT0175560003 Tumor 0.3
CPT0209490003 Tumor 0.3
CPT0191710003 Tumor 0.3
CPT0234930004 Tumor 0.3
CPT0197150003 Tumor 0.3
CPT0063430003 Tumor 0.2
CPT0204800003 Tumor 0.2
CPT0221200003 Tumor 0.2
CPT0087190003 Tumor 0.2
CPT0209020004 Tumor 0.2
CPT0104930003 Tumor 0.2
CPT0223790003 Tumor 0.2
CPT0237550004 Tumor 0.2
CPT0227400003 Tumor 0.2
CPT0112580003 Tumor 0.2
CPT0175260003 Tumor 0.2
CPT0001020003 Tumor 0.2
CPT0237060004 Tumor 0.2
CPT0232670003 Tumor 0.2
CPT0234790003 Tumor 0.2
CPT0063480003 Tumor 0.2
CPT0175390003 Tumor 0.2
CPT0186180003 Tumor 0.2
CPT0175120003 Tumor 0.2
CPT0126390003 Tumor 0.2
CPT0090440003 Tumor 0.2
CPT0023470003 Tumor 0.2
CPT0105420003 Tumor 0.2
CPT0147180004 Tumor 0.2
CPT0225380003 Tumor 0.2
CPT0202020008 Tumor 0.1
CPT0183250004 Tumor 0.1
CPT0007740003 Tumor 0.1
CPT0089880003 Tumor 0.1
CPT0218310003 Normal 0.1
CPT0223820003 Normal 0.1
CPT0202530004 Tumor 0.1
CPT0130270003 Tumor 0.1
CPT0112720003 Tumor 0.1
CPT0108560003 Tumor 0.1
CPT0126740003 Tumor 0.1
CPT0237410004 Tumor 0.1
CPT0237970004 Tumor 0.1
CPT0241170003 Tumor 0.1
CPT0117720003 Tumor 0.1
CPT0207210003 Tumor 0.1
CPT0128890003 Tumor 0.1
CPT0217420003 Tumor 0.1
CPT0112600003 Normal 0.1
CPT0130410003 Tumor 0.1
CPT0112650003 Tumor 0.1
CPT0190550003 Tumor 0.1
CPT0112540003 Tumor 0.1
CPT0197480003 Tumor 0.0
CPT0079110003 Normal 0.0
CPT0098770003 Tumor 0.0
CPT0126830003 Normal 0.0
CPT0126810003 Tumor 0.0
CPT0064040003 Tumor 0.0
CPT0234560003 Tumor 0.0
CPT0126530003 Tumor 0.0
CPT0191930003 Normal 0.0
CPT0233320003 Tumor 0.0
CPT0186210003 Normal 0.0
CPT0130440004 Normal 0.0
CPT0197860003 Normal 0.0
CPT0111000004 Normal 0.0
CPT0221650003 Tumor 0.0
CPT0221660003 Normal 0.0
CPT0202720003 Tumor 0.0
CPT0233600003 Tumor 0.0
CPT0010060003 Normal 0.0
CPT0126450003 Tumor 0.0
CPT0108600003 Normal 0.0
CPT0126760003 Normal 0.0
CPT0136640003 Tumor 0.0
CPT0069890003 Tumor 0.0
CPT0136660003 Normal 0.0
CPT0098800003 Normal 0.0
CPT0128900003 Normal 0.0
CPT0233120003 Tumor 0.0
CPT0237210003 Normal 0.0
CPT0202740003 Normal 0.0
CPT0237570003 Normal 0.0
CPT0227420003 Normal 0.0
CPT0187370003 Tumor -0.1
CPT0186130003 Tumor -0.1
CPT0236430003 Normal -0.1
CPT0115860003 Normal -0.1
CPT0245840003 Normal -0.1
CPT0063440003 Normal -0.1
CPT0197380003 Normal -0.1
CPT0202040003 Normal -0.1
CPT0101130003 Tumor -0.1
CPT0202220004 Normal -0.1
CPT0221220003 Normal -0.1
CPT0175410003 Normal -0.1
CPT0007760003 Normal -0.1
CPT0202350004 Tumor -0.1
CPT0245880003 Tumor -0.1
CPT0234580003 Normal -0.1
CPT0204600003 Tumor -0.1
CPT0209040003 Normal -0.1
CPT0245790003 Normal -0.1
CPT0238130003 Normal -0.1
CPT0146400003 Normal -0.1
CPT0112660003 Normal -0.1
CPT0195520003 Normal -0.1
CPT0187380003 Normal -0.1
CPT0023500003 Normal -0.1
CPT0079060003 Normal -0.1
CPT0111150004 Tumor -0.1
CPT0126470003 Normal -0.1
CPT0126400003 Normal -0.1
CPT0205000003 Normal -0.1
CPT0197100003 Normal -0.1
CPT0233640003 Normal -0.2
CPT0147700003 Normal -0.2
CPT0237080003 Normal -0.2
CPT0175160003 Normal -0.2
CPT0175270003 Normal -0.2
CPT0064050003 Normal -0.2
CPT0104380003 Normal -0.2
CPT0222730003 Tumor -0.2
CPT0245890003 Normal -0.2
CPT0222740003 Normal -0.2
CPT0225470003 Normal -0.2
CPT0102840003 Normal -0.2
CPT0209510003 Normal -0.2
CPT0237430003 Normal -0.2
CPT0207250003 Normal -0.2
CPT0232690003 Normal -0.2
CPT0237780003 Normal -0.2
CPT0186140003 Normal -0.2
CPT0196810003 Tumor -0.2
CPT0217490003 Normal -0.3
CPT0233330003 Normal -0.3
CPT0068320003 Normal -0.3
CPT0146500003 Normal -0.3
CPT0112550003 Normal -0.3
CPT0123350003 Tumor -0.3
CPT0204820003 Normal -0.3
CPT0234950004 Normal -0.3
CPT0241210003 Normal -0.3
CPT0208780003 Normal -0.3
CPT0196820003 Normal -0.3
CPT0083990003 Normal -0.3
CPT0063500003 Normal -0.3
CPT0237710003 Normal -0.3
CPT0202400004 Normal -0.3
CPT0191750003 Normal -0.3
CPT0086270003 Normal -0.3
CPT0130070003 Normal -0.3
CPT0197520003 Normal -0.3
CPT0227020003 Tumor -0.3
CPT0123370003 Normal -0.3
CPT0197170003 Normal -0.3
CPT0233160003 Normal -0.3
CPT0204660003 Normal -0.3
CPT0219390003 Normal -0.3
CPT0234820003 Normal -0.3
CPT0091610003 Tumor -0.4
CPT0091090003 Normal -0.4
CPT0087210003 Normal -0.4
CPT0117770003 Normal -0.4
CPT0227070003 Normal -0.4
CPT0202580004 Normal -0.4
CPT0112730003 Normal -0.4
CPT0105430003 Normal -0.4
CPT0001030003 Normal -0.4
CPT0091620003 Normal -0.4
CPT0147200003 Normal -0.4
CPT0183270003 Normal -0.4
CPT0104950003 Normal -0.4
CPT0237990003 Normal -0.4
CPT0130310003 Normal -0.5
CPT0192590004 Normal -0.5
CPT0069900003 Normal -0.7
Show allShow less
LUNG CANCER - Protein expressioni

A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.

Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.

 

Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.


Antibody HPA011311

Antibody CAB010339
 Staining
  High
  Medium
  Low
  Not detected
 Intensity
  Strong
  Moderate
  Weak
  Negative
 Quantity
  >75%
  75%-25%
  <25%
  None
 Location
  Nuclear
  Cytoplasmic/membranous
  Cytoplasmic/membranous,nuclear
  None
Adenocarcinoma, NOS
Squamous cell carcinoma, NOS

Contact

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