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  • SUMMARY

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CANCER RENAL CANCER Show tissue menu
BREAST CANCER CARCINOID CERVICAL CANCER COLORECTAL CANCER ENDOMETRIAL CANCER GLIOMA HEAD AND NECK CANCER LIVER CANCER LUNG CANCER LYMPHOMA
MELANOMA OVARIAN CANCER PANCREATIC CANCER PROSTATE CANCER RENAL CANCER SKIN CANCER STOMACH CANCER TESTIS CANCER THYROID CANCER UROTHELIAL CANCER
KICH TCGA KIRC TCGA KIRC VALIDATION KIRP TCGA PROTEIN RCC CPTAC PROTEIN EXPRESSION
ANTIBODIES
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Dictionary
Renal cancer
Human cancer
Kidney chromophobe
Kidney renal clear cell carcinoma
Kidney renal papillary cell carcinoma
KIDNEY CHROMOPHOBE (TCGA) - Interactive survival scatter ploti

The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.

The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".

Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.

Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.

& Survival analysisi

Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.

RPL10 is not prognostic in Kidney Chromophobe (TCGA)


Stage:
Survival analysis
Current cut offi

Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.

:
Best expression cut offi

Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .

When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.

: 328.93
Median expressioni

Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.

: N/A
Median follow up timei

Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.

: N/A
P scorei

Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.

N/A
5-year survival highi

5-year survival for patients with higher expression than the expression cutoff.

For melanoma and glioma, 3-year survival is shown.

N/A
5-year survival lowi

5-year survival for patients with lower expression than the expression cutoff.

For melanoma and glioma, 3-year survival is shown.

N/A
TCGA RNA samplesi

RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.

Average pTPM 1570.1
Number of samples 64
Samples
Sample Description pTPM
TCGA-KN-8427-01A 54 years, male, white, stage:Stage IV, alive, 30 days 6447.5
TCGA-KL-8339-01A 67 years, male, white, stage:Stage IV, dead, 855 days 4217.3
TCGA-KL-8324-01A 67 years, female, white, stage:Stage II, alive, 4676 days 3562.6
TCGA-KO-8414-01A 50 years, female, white, stage:Stage II, alive, 3212 days 3364.7
TCGA-KO-8417-01A 30 years, female, white, stage:Stage I, alive, 2815 days 3146.0
TCGA-KL-8346-01A 62 years, male, white, stage:Stage II, alive, 1897 days 2884.6
TCGA-KN-8435-01A 59 years, male, white, stage:Stage II, alive, 3498 days 2800.0
TCGA-KO-8413-01A 46 years, male, white, stage:Stage I, alive, 3038 days 2778.6
TCGA-KO-8406-01A 17 years, female, white, stage:Stage I, alive, 3145 days 2772.0
TCGA-KM-8442-01A 38 years, male, stage:Stage II, alive, 1437 days 2762.4
TCGA-KL-8337-01A 26 years, male, black or african american, stage:Stage II, alive, 1364 days 2661.0
TCGA-KL-8344-01A 51 years, male, white, stage:Stage III, alive, 876 days 2545.6
TCGA-KL-8330-01A 44 years, female, black or african american, stage:Stage II, alive, 3304 days 2465.8
TCGA-KO-8415-01A 44 years, female, white, stage:Stage I, alive, 2939 days 2451.5
TCGA-KL-8334-01A 37 years, female, white, stage:Stage III, alive, 2949 days 2382.3
TCGA-KO-8408-01A 47 years, male, white, stage:Stage III, dead, 507 days 2352.9
TCGA-KN-8425-01A 53 years, male, white, stage:Stage I, alive, 3179 days 2270.9
TCGA-KN-8418-01A 41 years, female, white, stage:Stage II, alive, 3935 days 2261.4
TCGA-KN-8421-01A 47 years, female, white, stage:Stage II, alive, 2674 days 2251.2
TCGA-KO-8405-01A 29 years, male, white, stage:Stage III, alive, 3056 days 2208.4
TCGA-KO-8407-01A 42 years, male, white, stage:Stage II, alive, 2820 days 2157.5
TCGA-KO-8410-01A 74 years, female, white, stage:Stage I, alive, 3136 days 2154.2
TCGA-KL-8340-01A 34 years, male, white, stage:Stage II, alive, 2024 days 2116.5
TCGA-KO-8404-01A 78 years, male, white, stage:Stage IV, dead, 325 days 2009.7
TCGA-KL-8335-01A 67 years, male, white, stage:Stage III, alive, 2815 days 1990.1
TCGA-KL-8328-01A 60 years, male, white, stage:Stage II, alive, 3127 days 1954.8
TCGA-KL-8341-01A 41 years, male, asian, stage:Stage IV, dead, 754 days 1943.8
TCGA-KL-8325-01A 56 years, female, white, stage:Stage II, dead, 725 days 1929.8
TCGA-KM-8438-01A 45 years, female, white, stage:Stage II, alive, 4622 days 1789.2
TCGA-KL-8342-01A 45 years, female, white, stage:Stage II, alive, 2248 days 1768.1
TCGA-KL-8345-01A 75 years, male, white, stage:Stage III, alive, 1665 days 1741.2
TCGA-KM-8443-01A 57 years, male, white, stage:Stage II, alive, 1520 days 1633.4
TCGA-KL-8332-01A 55 years, male, white, stage:Stage I, alive, 2582 days 1613.6
TCGA-KO-8403-01A 49 years, male, white, stage:Stage I, alive, 3208 days 1543.2
TCGA-KN-8431-01A 35 years, female, stage:Stage II, alive, 588 days 1484.4
TCGA-KM-8476-01A 47 years, male, white, stage:Stage I, alive, 3745 days 1439.4
TCGA-KO-8416-01A 41 years, male, white, stage:Stage III, alive, 2752 days 1279.7
TCGA-KM-8441-01A 61 years, female, white, stage:Stage I, alive, 876 days 1184.4
TCGA-KM-8477-01A 56 years, male, white, stage:Stage I, alive, 1553 days 1165.8
TCGA-KM-8639-01A 67 years, male, white, stage:Stage I, alive, 953 days 1048.2
TCGA-KM-8439-01A 30 years, male, white, stage:Stage I, alive, 708 days 876.9
TCGA-KN-8437-01A 42 years, female, white, stage:Stage I, alive, 3068 days 664.5
TCGA-KN-8428-01A 71 years, male, white, stage:Stage II, dead, 1590 days 598.3
TCGA-KN-8436-01A 62 years, male, white, stage:Stage II, alive, 1288 days 473.7
TCGA-KN-8433-01A 46 years, female, white, stage:Stage III, alive, 341 days 453.0
TCGA-KN-8423-01A 44 years, male, white, stage:Stage I, alive, 788 days 411.4
TCGA-KO-8409-01A 69 years, male, white, stage:Stage II, alive, 3180 days 411.1
TCGA-KL-8329-01A 57 years, female, asian, stage:Stage I, alive, 2752 days 379.1
TCGA-KL-8338-01A 51 years, male, white, stage:Stage III, alive, 2633 days 351.4
TCGA-KL-8331-01A 48 years, female, white, stage:Stage II, alive, 3010 days 344.9
TCGA-KN-8434-01A 65 years, female, white, stage:Stage II, alive, 1797 days 331.6
TCGA-KL-8326-01A 69 years, male, white, stage:Stage III, alive, 3322 days 326.3
TCGA-KN-8426-01A 50 years, male, white, stage:Stage IV, alive, 108 days 320.7
TCGA-KL-8323-01A 57 years, female, white, stage:Stage III, dead, 1158 days 281.5
TCGA-KO-8411-01A 58 years, male, white, stage:Stage I, alive, 3958 days 270.0
TCGA-KN-8432-01A 86 years, female, white, stage:Stage II, alive, 76 days 236.5
TCGA-KN-8424-01A 42 years, female, white, stage:Stage I, alive, 1983 days 223.1
TCGA-KN-8429-01A 38 years, female, white, stage:Stage III, alive, 2650 days 220.3
TCGA-KL-8336-01A 51 years, female, white, stage:Stage IV, dead, 920 days 193.7
TCGA-KN-8419-01A 43 years, male, black or african american, stage:Stage II, alive, 714 days 178.9
TCGA-KL-8343-01A 72 years, male, white, stage:Stage III, dead, 2172 days 175.4
TCGA-KL-8333-01A 69 years, male, white, stage:Stage II, alive, 2991 days 138.3
TCGA-KM-8440-01A 37 years, male, black or african american, stage:Stage III, alive, 1366 days 97.0
TCGA-KL-8327-01A 46 years, female, white, stage:Stage I, alive, 4169 days 0.0
Show allShow less
KIDNEY RENAL CLEAR CELL CARCINOMA (TCGA) - Interactive survival scatter ploti

The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.

The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".

Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.

Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.

& Survival analysisi

Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.

RPL10 is not prognostic in Kidney Renal Clear Cell Carcinoma (TCGA)


Stage:

Survival analysis
Current cut offi

Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.

:
Best expression cut offi

Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .

When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.

: 3595.25
Median expressioni

Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.

: N/A
Median follow up timei

Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.

: N/A
P scorei

Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.

N/A
5-year survival highi

5-year survival for patients with higher expression than the expression cutoff.

For melanoma and glioma, 3-year survival is shown.

N/A
5-year survival lowi

5-year survival for patients with lower expression than the expression cutoff.

For melanoma and glioma, 3-year survival is shown.

N/A
TCGA RNA samplesi

RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.

Average pTPM 4309.3
Number of samples 521
Samples
Sample Description pTPM
TCGA-A3-3383-01A 52 years, male, white, stage:Stage I, alive, 861 days 13481.7
TCGA-AK-3428-01A 62 years, male, white, stage:Stage III, alive, 3728 days 13373.9
TCGA-CZ-4860-01A 60 years, male, white, stage:Stage IV, dead, 206 days 12253.6
TCGA-CW-6090-01A 68 years, male, white, stage:Stage I, alive, 2552 days 11294.4
TCGA-EU-5905-01A 67 years, female, white, stage:Stage I, alive, 119 days 10279.0
TCGA-AK-3436-01A 40 years, male, white, stage:Stage IV, alive, 3331 days 10026.6
TCGA-CZ-5465-01A 76 years, female, stage:Stage III, dead, 2564 days 9640.9
TCGA-B8-4154-01A 73 years, female, white, stage:Stage I, alive, 1380 days 9385.1
TCGA-A3-3382-01A 69 years, male, white, stage:Stage I, alive, 574 days 9344.4
TCGA-B0-5120-01A 72 years, female, white, stage:Stage I, alive, 1169 days 9338.2
TCGA-CJ-4870-01A 58 years, female, black or african american, stage:Stage III, alive, 1498 days 9071.6
TCGA-A3-3306-01A 67 years, male, white, stage:Stage I, alive, 1120 days 8407.6
TCGA-B0-5116-01A 52 years, male, white, stage:Stage III, alive, 1274 days 8289.5
TCGA-B0-5705-01A 65 years, female, white, stage:Stage I, alive, 4537 days 8263.7
TCGA-G6-A8L6-01A 55 years, male, black or african american, stage:Stage IV, dead, 313 days 7933.1
TCGA-B8-4151-01A 51 years, female, white, stage:Stage III, alive, 1299 days 7909.1
TCGA-CZ-5458-01A 43 years, male, white, stage:Stage III, alive, 2789 days 7871.6
TCGA-B2-4099-01A 83 years, male, white, stage:Stage I, alive, 972 days 7753.8
TCGA-B0-4710-01A 75 years, female, white, stage:Stage III, alive, 1755 days 7538.6
TCGA-AK-3431-01A 62 years, female, white, stage:Stage II, dead, 2241 days 7502.3
TCGA-CZ-5454-01A 63 years, male, white, stage:Stage IV, dead, 722 days 7492.8
TCGA-B8-4620-01A 70 years, female, white, stage:Stage III, alive, 777 days 7412.7
TCGA-B0-5080-01A 63 years, male, white, stage:Stage IV, dead, 342 days 7395.6
TCGA-CZ-5461-01A 52 years, male, white, stage:Stage IV, dead, 330 days 7370.2
TCGA-CW-5581-01A 44 years, male, white, stage:Stage I, alive, 2799 days 7289.0
TCGA-CZ-5460-01A 55 years, male, white, stage:Stage IV, alive, 2873 days 7273.0
TCGA-A3-3329-01A 75 years, male, white, stage:Stage I, alive, 1624 days 7256.4
TCGA-AK-3458-01A 48 years, male, white, stage:Stage I, alive, 1168 days 7244.0
TCGA-BP-4967-01A 76 years, male, white, stage:Stage III, alive, 205 days 7153.7
TCGA-BP-4329-01A 75 years, male, white, stage:Stage III, dead, 845 days 7117.2
TCGA-BP-4781-01A 78 years, male, white, stage:Stage I, alive, 2080 days 7011.1
TCGA-B0-5113-01A 69 years, female, white, stage:Stage III, alive, 1175 days 7006.3
TCGA-B0-5399-01A 46 years, male, white, stage:Stage I, alive, 1411 days 6968.7
TCGA-CZ-5467-01A 86 years, female, white, stage:Stage III, dead, 73 days 6959.4
TCGA-CW-5588-01A 78 years, female, white, stage:Stage I, alive, 2017 days 6916.6
TCGA-CJ-6031-01A 54 years, male, white, stage:Stage I, alive, 1906 days 6786.2
TCGA-B8-A54K-01A 61 years, male, black or african american, stage:Stage I, alive, 469 days 6780.3
TCGA-B8-5549-01A 53 years, male, white, stage:Stage I, alive, 194 days 6745.5
TCGA-CW-5590-01A 51 years, male, white, stage:Stage IV, dead, 1075 days 6733.0
TCGA-A3-3346-01A 68 years, male, white, stage:Stage I, dead, 137 days 6704.4
TCGA-CZ-4858-01A 39 years, male, white, stage:Stage II, dead, 2105 days 6675.2
TCGA-BP-4762-01A 42 years, male, white, stage:Stage I, dead, 1343 days 6630.9
TCGA-CZ-4865-01A 70 years, female, white, stage:Stage I, dead, 166 days 6618.5
TCGA-AK-3425-01A 68 years, male, white, stage:Stage I, alive, 3343 days 6539.5
TCGA-B0-4688-01A 46 years, male, white, stage:Stage IV, dead, 101 days 6528.8
TCGA-CZ-4854-01A 68 years, male, white, stage:Stage I, dead, 1404 days 6478.7
TCGA-CZ-5459-01A 63 years, male, white, stage:Stage III, alive, 1683 days 6367.6
TCGA-CJ-4871-01A 63 years, male, white, stage:Stage IV, alive, 2423 days 6347.6
TCGA-B0-4814-01A 58 years, male, white, stage:Stage IV, dead, 168 days 6308.1
TCGA-B0-4712-01A 76 years, male, white, stage:Stage IV, dead, 1337 days 6284.4
TCGA-B0-5695-01A 61 years, female, white, stage:Stage I, alive, 2150 days 6278.7
TCGA-BP-5180-01A 53 years, male, white, stage:Stage I, alive, 2263 days 6270.3
TCGA-CJ-4872-01A 51 years, male, white, stage:Stage I, alive, 1435 days 6263.3
TCGA-CZ-4857-01A 56 years, male, white, stage:Stage IV, dead, 1432 days 6250.5
TCGA-B0-4718-01A 57 years, male, white, stage:Stage III, alive, 1778 days 6246.7
TCGA-CJ-4902-01A 61 years, male, white, stage:Stage III, alive, 1520 days 6215.7
TCGA-AS-3778-01A 35 years, male, white, stage:Stage I, alive, 43 days 6215.3
TCGA-BP-4169-01A 76 years, female, white, stage:Stage II, dead, 701 days 6215.1
TCGA-BP-4789-01A 48 years, male, white, stage:Stage I, alive, 1489 days 6182.7
TCGA-BP-5170-01A 55 years, male, white, stage:Stage I, alive, 2412 days 6145.0
TCGA-BP-4803-01A 79 years, male, white, stage:Stage III, alive, 204 days 6120.4
TCGA-BP-4760-01A 69 years, male, black or african american, stage:Stage I, alive, 2361 days 6110.8
TCGA-A3-3343-01A 79 years, male, white, stage:Stage II, alive, 945 days 6069.0
TCGA-BP-4177-01A 65 years, male, white, stage:Stage I, alive, 1670 days 6067.6
TCGA-B4-5378-01A 62 years, male, white, stage:Stage I, alive, 175 days 6062.4
TCGA-BP-5184-01A 54 years, male, white, stage:Stage I, alive, 1133 days 6047.2
TCGA-CZ-5988-01A 38 years, male, white, stage:Stage I, alive, 693 days 6046.1
TCGA-A3-A8OV-01A 75 years, male, black or african american, stage:Stage I, alive, 340 days 6021.7
TCGA-EU-5907-01A 81 years, male, white, stage:Stage III, alive, 127 days 5994.8
TCGA-B8-A54F-01A 49 years, female, black or african american, stage:Stage I, alive, 519 days 5984.2
TCGA-B2-3924-01A 73 years, male, white, stage:Stage I, alive, 1092 days 5974.0
TCGA-CJ-5682-01A 60 years, male, white, stage:Stage IV, alive, 3736 days 5947.1
TCGA-A3-3380-01A 54 years, male, stage:Stage I, alive, 567 days 5941.2
TCGA-MW-A4EC-01A 72 years, female, black or african american, stage:Stage I, alive, 498 days 5928.9
TCGA-B0-5693-01A 47 years, female, white, stage:Stage I, alive, 4074 days 5918.6
TCGA-CZ-5466-01A 67 years, male, stage:Stage III, alive, 685 days 5876.2
TCGA-A3-3325-01A 52 years, male, white, stage:Stage I, dead, 1170 days 5870.1
TCGA-B0-4823-01A 88 years, male, white, stage:Stage I, dead, 454 days 5868.2
TCGA-BP-4166-01A 69 years, male, white, stage:Stage III, alive, 13 days 5864.9
TCGA-A3-3323-01A 53 years, male, white, stage:Stage I, alive, 1106 days 5860.2
TCGA-BP-4326-01A 53 years, female, white, stage:Stage I, dead, 1625 days 5859.5
TCGA-BP-4801-01A 57 years, male, white, stage:Stage I, alive, 1124 days 5843.0
TCGA-A3-3352-01A 74 years, male, white, stage:Stage III, dead, 561 days 5832.6
TCGA-BP-4353-01A 61 years, male, white, stage:Stage I, dead, 375 days 5807.5
TCGA-BP-4342-01A 79 years, male, white, stage:Stage II, dead, 2256 days 5799.0
TCGA-B0-5402-01A 64 years, male, white, stage:Stage IV, alive, 1290 days 5798.0
TCGA-B0-4706-01A 61 years, male, white, stage:Stage III, dead, 65 days 5793.6
TCGA-CZ-5984-01A 51 years, male, white, stage:Stage I, alive, 2067 days 5776.3
TCGA-B0-4844-01A 60 years, male, white, stage:Stage IV, dead, 313 days 5769.1
TCGA-CJ-4635-01A 48 years, male, white, stage:Stage I, alive, 1416 days 5747.5
TCGA-BP-4975-01A 40 years, male, white, stage:Stage I, alive, 1433 days 5745.8
TCGA-DV-5569-01A 29 years, female, white, stage:Stage I, alive, 355 days 5739.6
TCGA-BP-4759-01A 50 years, male, white, stage:Stage I, alive, 2372 days 5737.9
TCGA-B8-A7U6-01A 54 years, female, black or african american, stage:Stage I, alive, 495 days 5735.8
TCGA-BP-4176-01A 64 years, male, white, stage:Stage I, alive, 1955 days 5709.3
TCGA-CZ-5986-01A 61 years, male, white, stage:Stage I, alive, 373 days 5697.4
TCGA-BP-4784-01A 67 years, female, white, stage:Stage I, alive, 1854 days 5696.5
TCGA-CW-5580-01A 73 years, female, white, stage:Stage IV, dead, 1964 days 5689.1
TCGA-BP-4961-01A 47 years, male, white, stage:Stage I, alive, 1935 days 5686.0
TCGA-A3-3367-01A 72 years, male, white, stage:Stage I, alive, 2270 days 5672.7
TCGA-AK-3427-01A 65 years, male, white, stage:Stage I, alive, 3583 days 5672.0
TCGA-BP-4765-01A 43 years, male, white, stage:Stage I, alive, 2184 days 5637.5
TCGA-A3-A6NL-01A 49 years, female, black or african american, stage:Stage I, alive, 689 days 5616.4
TCGA-B0-5700-01A 77 years, male, white, stage:Stage I, alive, 1790 days 5586.2
TCGA-CZ-4861-01A 63 years, male, white, stage:Stage II, dead, 446 days 5581.2
TCGA-B0-4845-01A 70 years, male, white, stage:Stage IV, dead, 1986 days 5552.8
TCGA-B8-5165-01A 43 years, male, white, stage:Stage I, alive, 737 days 5526.3
TCGA-B0-5095-01A 81 years, male, white, stage:Stage III, dead, 245 days 5524.7
TCGA-BP-4164-01A 51 years, female, white, stage:Stage III, dead, 992 days 5482.8
TCGA-CJ-5684-01A 61 years, male, white, stage:Stage III, alive, 2231 days 5472.0
TCGA-BP-5181-01A 58 years, female, white, stage:Stage I, alive, 1495 days 5468.4
TCGA-BP-4795-01A 74 years, female, white, stage:Stage I, alive, 620 days 5464.4
TCGA-CJ-4897-01A 79 years, female, white, stage:Stage III, alive, 3341 days 5436.6
TCGA-DV-5567-01A 40 years, female, black or african american, stage:Stage I, alive, 2004 days 5431.1
TCGA-A3-A6NN-01A 78 years, male, black or african american, stage:Stage I, alive, 3 days 5430.4
TCGA-CJ-4905-01A 62 years, female, white, stage:Stage I, alive, 1496 days 5428.8
TCGA-CJ-4639-01A 49 years, female, white, stage:Stage II, alive, 3229 days 5427.1
TCGA-BP-4170-01A 72 years, female, white, stage:Stage I, dead, 2343 days 5415.5
TCGA-CZ-5464-01A 69 years, male, white, stage:Stage IV, alive, 2128 days 5412.3
TCGA-CZ-5457-01A 62 years, male, white, stage:Stage III, alive, 2754 days 5403.4
TCGA-B0-5102-01A 74 years, female, white, stage:Stage I, dead, 2764 days 5402.2
TCGA-CJ-4907-01A 58 years, male, white, stage:Stage III, alive, 1499 days 5393.9
TCGA-BP-4987-01A 41 years, female, asian, stage:Stage I, alive, 1124 days 5390.7
TCGA-B0-4701-01A 66 years, female, white, stage:Stage IV, dead, 238 days 5375.4
TCGA-B8-4143-01A 66 years, female, white, stage:Stage IV, dead, 709 days 5370.2
TCGA-CW-5589-01A 52 years, male, white, stage:Stage I, alive, 2378 days 5320.7
TCGA-CZ-5456-01A 57 years, male, white, stage:Stage II, alive, 2422 days 5294.3
TCGA-CW-6093-01A 73 years, male, white, stage:Stage I, alive, 3146 days 5293.6
TCGA-BP-4332-01A 36 years, male, white, stage:Stage III, alive, 1133 days 5278.9
TCGA-AK-3445-01A 69 years, male, white, stage:Stage III, alive, 2392 days 5267.9
TCGA-AK-3460-01A 58 years, male, white, stage:Stage I, alive, 2508 days 5266.2
TCGA-BP-4964-01A 54 years, female, white, stage:Stage I, alive, 1862 days 5247.1
TCGA-B2-5636-01A 79 years, male, white, stage:Stage I, alive, 919 days 5186.7
TCGA-CZ-5451-01A 74 years, male, white, stage:Stage II, alive, 1929 days 5162.5
TCGA-B2-5633-01A 56 years, male, white, stage:Stage I, alive, 963 days 5157.9
TCGA-A3-3349-01A 34 years, female, white, stage:Stage I, alive, 1385 days 5157.7
TCGA-BP-4974-01A 58 years, male, white, stage:Stage IV, dead, 211 days 5152.8
TCGA-BP-4807-01A 42 years, male, white, stage:Stage I, alive, 211 days 5143.4
TCGA-BP-4330-01A 60 years, female, black or african american, stage:Stage III, alive, 1888 days 5105.5
TCGA-BP-5199-01A 58 years, male, white, stage:Stage II, alive, 1355 days 5101.7
TCGA-BP-5196-01A 53 years, male, white, stage:Stage I, alive, 1018 days 5062.1
TCGA-B0-5097-01A 59 years, female, white, stage:Stage III, alive, 665 days 5055.8
TCGA-CW-5583-01A 51 years, female, white, stage:Stage I, alive, 2489 days 5054.1
TCGA-CJ-5671-01A 51 years, male, white, stage:Stage I, alive, 3987 days 5045.8
TCGA-B0-4848-01A 54 years, male, white, stage:Stage III, dead, 883 days 5043.8
TCGA-B0-5699-01A 53 years, male, white, stage:Stage I, alive, 3841 days 5042.5
TCGA-B0-4713-01A 76 years, female, white, stage:Stage III, dead, 202 days 5018.9
TCGA-BP-4161-01A 74 years, male, white, stage:Stage I, alive, 2746 days 4997.5
TCGA-BP-5194-01A 39 years, male, white, stage:Stage I, alive, 408 days 4994.9
TCGA-AK-3434-01A 72 years, male, white, stage:Stage I, alive, 2087 days 4977.9
TCGA-BP-4343-01A 64 years, male, white, stage:Stage III, dead, 1912 days 4968.0
TCGA-B0-5100-01A 72 years, male, black or african american, stage:Stage III, dead, 1913 days 4965.4
TCGA-B4-5835-01A 64 years, female, white, stage:Stage I, alive, 16 days 4941.8
TCGA-B2-4101-01A 52 years, male, white, stage:Stage II, alive, 648 days 4933.5
TCGA-CJ-4903-01A 50 years, male, white, stage:Stage I, alive, 1560 days 4924.5
TCGA-CJ-6028-01A 58 years, male, white, stage:Stage IV, dead, 1625 days 4911.5
TCGA-GK-A6C7-01A 76 years, female, black or african american, stage:Stage I, alive, 61 days 4885.3
TCGA-B8-5159-01A 61 years, female, white, stage:Stage I, alive, 722 days 4882.3
TCGA-BP-5168-01A 75 years, male, white, stage:Stage I, dead, 1463 days 4875.2
TCGA-B0-5108-01A 54 years, male, white, stage:Stage III, alive, 1782 days 4869.3
TCGA-B0-5812-01A 53 years, male, white, stage:Stage I, alive, 3834 days 4833.1
TCGA-CZ-4859-01A 59 years, female, white, stage:Stage I, alive, 1787 days 4815.4
TCGA-BP-4351-01A 51 years, female, white, stage:Stage III, alive, 970 days 4807.4
TCGA-MM-A564-01A 68 years, male, black or african american, stage:Stage II, alive, 607 days 4804.1
TCGA-BP-4775-01A 55 years, female, white, stage:Stage I, alive, 1843 days 4790.6
TCGA-BP-5182-01A 56 years, male, white, stage:Stage I, alive, 1165 days 4785.3
TCGA-B0-4690-01A 65 years, male, white, stage:Stage IV, dead, 43 days 4775.9
TCGA-BP-4959-01A 49 years, male, white, stage:Stage I, alive, 2660 days 4771.0
TCGA-CW-6097-01A 32 years, male, white, stage:Stage III, dead, 571 days 4764.4
TCGA-BP-5195-01A 75 years, male, white, stage:Stage I, alive, 749 days 4757.5
TCGA-B8-4622-01A 57 years, male, white, stage:Stage IV, alive, 1525 days 4745.5
TCGA-BP-4344-01A 75 years, female, white, stage:Stage I, alive, 1666 days 4744.0
TCGA-BP-5187-01A 54 years, male, white, stage:Stage I, alive, 406 days 4738.7
TCGA-B0-4694-01A 72 years, male, white, stage:Stage III, dead, 106 days 4729.2
TCGA-BP-5007-01A 45 years, male, white, stage:Stage II, alive, 1140 days 4725.9
TCGA-BP-4768-01A 72 years, female, white, stage:Stage I, alive, 400 days 4721.6
TCGA-A3-3372-01A 64 years, male, white, stage:Stage III, alive, 735 days 4715.7
TCGA-CJ-4886-01A 42 years, female, white, stage:Stage I, alive, 1952 days 4701.5
TCGA-B4-5377-01A 68 years, female, white, stage:Stage IV, alive, 365 days 4693.3
TCGA-B0-5094-01A 62 years, male, white, stage:Stage IV, dead, 333 days 4690.5
TCGA-B0-4810-01A 47 years, male, white, stage:Stage III, dead, 478 days 4687.0
TCGA-CJ-5678-01A 62 years, male, black or african american, stage:Stage IV, dead, 574 days 4682.8
TCGA-BP-4331-01A 52 years, male, white, stage:Stage I, dead, 2454 days 4678.8
TCGA-BP-4770-01A 73 years, female, white, stage:Stage IV, dead, 329 days 4674.5
TCGA-CZ-5469-01A 41 years, male, white, stage:Stage II, dead, 946 days 4668.3
TCGA-CZ-5463-01A 76 years, male, white, stage:Stage II, alive, 662 days 4663.0
TCGA-CJ-6033-01A 54 years, female, white, stage:Stage IV, dead, 224 days 4660.4
TCGA-BP-4976-01A 77 years, male, white, stage:Stage I, alive, 1632 days 4658.4
TCGA-CJ-6030-01A 65 years, male, white, stage:Stage I, dead, 2299 days 4649.7
TCGA-CJ-4868-01A 42 years, male, white, stage:Stage IV, dead, 646 days 4648.4
TCGA-B4-5838-01A 52 years, male, white, stage:'--, alive, 166 days 4626.7
TCGA-B0-4698-01A 75 years, male, white, stage:Stage IV, dead, 42 days 4597.9
TCGA-BP-5177-01A 46 years, female, white, stage:Stage I, alive, 293 days 4586.8
TCGA-B4-5834-01A 59 years, male, white, stage:Stage I, alive, 38 days 4574.6
TCGA-CZ-4853-01A 82 years, male, white, stage:Stage I, alive, 774 days 4568.1
TCGA-BP-5202-01A 75 years, male, white, stage:Stage III, alive, 29 days 4555.3
TCGA-B0-4816-01A 49 years, male, white, stage:Stage II, dead, 1371 days 4553.1
TCGA-BP-5192-01A 59 years, male, white, stage:Stage I, alive, 714 days 4525.3
TCGA-B0-4828-01A 79 years, male, white, stage:Stage IV, dead, 307 days 4516.0
TCGA-A3-A8OW-01A 37 years, male, black or african american, stage:Stage III, alive, 323 days 4508.6
TCGA-DV-5575-01A 52 years, female, white, stage:Stage I, alive, 1729 days 4502.2
TCGA-BP-5008-01A 46 years, male, white, stage:Stage I, alive, 1071 days 4490.8
TCGA-CJ-5683-01A 78 years, male, white, stage:Stage I, alive, 1889 days 4488.5
TCGA-CJ-4920-01A 64 years, female, white, stage:Stage I, dead, 139 days 4479.2
TCGA-BP-4159-01A 70 years, male, white, stage:Stage I, dead, 2601 days 4478.7
TCGA-CJ-4918-01A 64 years, male, white, stage:Stage IV, dead, 93 days 4477.3
TCGA-B0-4813-01A 68 years, male, white, stage:Stage III, dead, 18 days 4471.4
TCGA-3Z-A93Z-01A 69 years, male, black or african american, stage:Stage I, alive, 385 days 4468.9
TCGA-EU-5906-01A 55 years, male, white, stage:Stage I, alive, 206 days 4464.2
TCGA-A3-3362-01A 60 years, female, white, stage:Stage I, alive, 1559 days 4463.4
TCGA-CJ-4894-01A 58 years, male, white, stage:Stage III, dead, 841 days 4463.0
TCGA-BP-4986-01A 75 years, male, white, stage:Stage I, alive, 785 days 4459.5
TCGA-BP-4160-01A 67 years, male, white, stage:Stage III, alive, 2881 days 4449.7
TCGA-BP-5189-01A 60 years, male, white, stage:Stage I, dead, 822 days 4445.1
TCGA-BP-4991-01A 54 years, male, white, stage:Stage I, alive, 1413 days 4438.6
TCGA-A3-3322-01A 51 years, male, white, stage:Stage I, alive, 1478 days 4428.2
TCGA-CJ-5677-01A 54 years, female, white, stage:Stage IV, dead, 782 days 4421.2
TCGA-B2-5641-01A 79 years, male, white, stage:Stage I, alive, 656 days 4414.7
TCGA-A3-3387-01A 49 years, male, white, stage:Stage I, alive, 617 days 4412.7
TCGA-B0-5696-01A 69 years, male, white, stage:Stage III, alive, 2609 days 4400.6
TCGA-B0-5711-01A 50 years, male, white, stage:Stage III, alive, 3989 days 4377.1
TCGA-CJ-5675-01A 70 years, male, white, stage:Stage II, alive, 3936 days 4374.8
TCGA-DV-5566-01A 67 years, female, white, stage:Stage I, alive, 1398 days 4347.6
TCGA-AK-3461-01A 72 years, male, white, stage:Stage I, alive, 2217 days 4346.8
TCGA-AK-3429-01A 54 years, female, white, stage:Stage II, alive, 3328 days 4345.9
TCGA-B0-4703-01A 51 years, male, white, stage:Stage IV, dead, 182 days 4344.6
TCGA-BP-4993-01A 58 years, male, white, stage:Stage I, alive, 177 days 4340.3
TCGA-CW-5584-01A 74 years, male, white, stage:Stage III, dead, 164 days 4336.6
TCGA-CZ-5452-01A 69 years, male, white, stage:Stage II, alive, 1789 days 4331.0
TCGA-A3-3307-01A 66 years, male, stage:Stage III, alive, 1436 days 4321.5
TCGA-DV-5576-01A 55 years, female, black or african american, stage:Stage I, dead, 727 days 4318.6
TCGA-CJ-4885-01A 64 years, male, white, stage:Stage IV, alive, 3451 days 4303.7
TCGA-B0-5110-01A 71 years, female, white, stage:Stage I, alive, 2009 days 4294.4
TCGA-BP-5186-01A 50 years, female, white, stage:Stage I, alive, 693 days 4279.0
TCGA-BP-4355-01A 59 years, female, white, stage:Stage III, dead, 953 days 4275.8
TCGA-B0-4849-01A 51 years, male, white, stage:Stage III, dead, 69 days 4267.7
TCGA-A3-A8CQ-01A 59 years, female, black or african american, stage:Stage I, alive, 3 days 4267.6
TCGA-G6-A8L8-01A 62 years, female, black or african american, stage:Stage I, dead, 1091 days 4263.2
TCGA-A3-3365-01A 46 years, male, white, stage:Stage I, alive, 873 days 4261.1
TCGA-BP-4973-01A 47 years, male, white, stage:Stage III, alive, 1384 days 4260.1
TCGA-BP-5006-01A 61 years, male, white, stage:Stage I, alive, 840 days 4258.8
TCGA-B0-4696-01A 58 years, male, white, stage:Stage III, dead, 866 days 4254.7
TCGA-BP-4995-01A 68 years, male, white, stage:Stage I, alive, 1371 days 4244.1
TCGA-BP-4790-01A 76 years, male, white, stage:Stage I, dead, 1111 days 4222.3
TCGA-CJ-4892-01A 65 years, female, white, stage:Stage I, alive, 1521 days 4207.8
TCGA-A3-A6NI-01A 47 years, male, black or african american, stage:Stage I, alive, 1018 days 4197.9
TCGA-A3-A6NJ-01A 57 years, female, black or african american, stage:Stage I, alive, 468 days 4188.8
TCGA-B2-A4SR-01A 61 years, male, black or african american, stage:Stage II, alive, 507 days 4182.2
TCGA-B8-5545-01A 42 years, male, black or african american, stage:Stage I, alive, 1525 days 4178.5
TCGA-EU-5904-01A 47 years, female, white, stage:Stage I, alive, 551 days 4178.0
TCGA-B0-5119-01A 61 years, female, white, stage:Stage I, alive, 1552 days 4176.7
TCGA-BP-4167-01A 59 years, male, white, stage:Stage III, alive, 2718 days 4171.3
TCGA-B0-5084-01A 33 years, male, white, stage:Stage IV, dead, 222 days 4160.2
TCGA-B0-5098-01A 53 years, female, black or african american, stage:Stage I, dead, 1584 days 4159.4
TCGA-CJ-4643-01A 67 years, female, white, stage:Stage II, alive, 1793 days 4158.5
TCGA-CJ-5676-01A 47 years, male, white, stage:Stage III, alive, 4067 days 4153.5
TCGA-BP-4998-01A 49 years, male, asian, stage:Stage I, alive, 932 days 4138.3
TCGA-BP-4804-01A 59 years, male, white, stage:Stage I, alive, 1459 days 4136.8
TCGA-B0-5690-01A 53 years, female, white, stage:Stage I, alive, 3392 days 4119.0
TCGA-DV-5568-01A 26 years, male, white, stage:Stage I, alive, 370 days 4117.2
TCGA-CW-5585-01A 51 years, male, white, stage:Stage IV, alive, 2609 days 4115.1
TCGA-A3-3385-01A 46 years, female, white, stage:Stage I, alive, 1993 days 4109.4
TCGA-B8-5553-01A 67 years, female, white, stage:Stage I, alive, 435 days 4098.6
TCGA-B8-A54H-01A 69 years, female, black or african american, stage:Stage II, alive, 256 days 4093.5
TCGA-CJ-4895-01A 62 years, male, white, stage:Stage IV, dead, 1200 days 4084.0
TCGA-A3-3358-01A 57 years, female, white, stage:Stage I, alive, 1307 days 4076.5
TCGA-A3-3351-01A 42 years, male, white, stage:Stage II, alive, 910 days 4051.5
TCGA-BP-4158-01A 69 years, male, white, stage:Stage I, alive, 3377 days 4043.1
TCGA-B0-4836-01A 61 years, male, white, stage:Stage IV, dead, 1238 days 4035.7
TCGA-B4-5843-01A 45 years, male, white, stage:Stage I, alive, 11 days 4023.5
TCGA-B0-5694-01A 71 years, male, white, stage:Stage III, dead, 480 days 3990.4
TCGA-A3-3326-01A 47 years, male, white, stage:Stage I, alive, 1137 days 3989.7
TCGA-BP-4970-01A 44 years, male, asian, stage:Stage III, alive, 433 days 3988.3
TCGA-CJ-4640-01A 49 years, male, white, stage:Stage III, alive, 3480 days 3982.5
TCGA-BP-4327-01A 75 years, female, white, stage:Stage II, dead, 109 days 3971.0
TCGA-DV-A4VZ-01A 53 years, male, black or african american, stage:Stage I, alive, 365 days 3966.7
TCGA-B0-5709-01A 62 years, female, white, stage:Stage III, alive, 3974 days 3961.7
TCGA-B0-5698-01A 77 years, male, black or african american, stage:Stage I, alive, 3631 days 3954.1
TCGA-CW-6088-01A 60 years, male, white, stage:Stage I, alive, 3222 days 3953.4
TCGA-CJ-4904-01A 60 years, female, white, stage:Stage IV, alive, 3302 days 3945.4
TCGA-DV-5574-01A 37 years, male, white, stage:Stage I, alive, 2016 days 3942.9
TCGA-BP-4972-01A 43 years, female, white, stage:Stage III, alive, 1502 days 3928.9
TCGA-CJ-4874-01A 73 years, female, white, stage:Stage I, alive, 2283 days 3928.7
TCGA-B4-5836-01A 61 years, female, white, stage:Stage I, alive, 141 days 3928.0
TCGA-CJ-5679-01A 73 years, male, white, stage:Stage III, dead, 679 days 3925.1
TCGA-BP-4982-01A 42 years, male, white, stage:Stage I, alive, 1014 days 3922.6
TCGA-BP-4761-01A 57 years, male, white, stage:Stage III, alive, 182 days 3921.5
TCGA-B0-4691-01A 55 years, male, white, stage:Stage IV, dead, 139 days 3915.8
TCGA-CJ-4901-01A 47 years, male, white, stage:Stage III, alive, 1450 days 3913.8
TCGA-CJ-4908-01A 38 years, male, white, stage:Stage I, alive, 1531 days 3908.9
TCGA-CJ-4899-01A 42 years, male, asian, stage:Stage I, alive, 1528 days 3907.3
TCGA-B0-5710-01A 57 years, male, white, stage:Stage I, alive, 2430 days 3901.3
TCGA-BP-4782-01A 55 years, female, white, stage:Stage I, alive, 354 days 3893.2
TCGA-CJ-6027-01A 77 years, male, white, stage:Stage I, dead, 3615 days 3890.9
TCGA-CZ-5453-01A 67 years, male, white, stage:Stage II, dead, 2419 days 3881.5
TCGA-B8-5158-01A 56 years, male, white, stage:Stage III, alive, 1218 days 3850.5
TCGA-B0-5691-01A 66 years, female, white, stage:Stage I, alive, 3431 days 3849.7
TCGA-A3-3370-01A 48 years, female, white, stage:Stage I, alive, 2274 days 3838.2
TCGA-MM-A563-01A 41 years, male, black or african american, stage:'--, alive, 591 days 3835.6
TCGA-A3-3316-01A 57 years, male, white, stage:Stage II, alive, 1493 days 3828.8
TCGA-B4-5844-01A 61 years, female, white, stage:Stage II, alive, 7 days 3824.9
TCGA-CJ-4634-01A 60 years, female, white, stage:Stage I, alive, 3498 days 3815.0
TCGA-B0-4852-01A 78 years, female, white, stage:Stage II, dead, 1121 days 3814.0
TCGA-BP-4983-01A 67 years, female, asian, stage:Stage III, alive, 1413 days 3807.6
TCGA-BP-4763-01A 79 years, female, white, stage:Stage I, dead, 1270 days 3803.6
TCGA-B8-A8YJ-01A 60 years, female, black or african american, stage:Stage I, alive, 431 days 3795.7
TCGA-CZ-4862-01A 46 years, male, white, stage:Stage I, alive, 3271 days 3783.8
TCGA-CZ-5982-01A 59 years, female, white, stage:Stage I, alive, 2439 days 3769.8
TCGA-BP-4163-01A 60 years, female, white, stage:Stage III, alive, 2839 days 3767.2
TCGA-A3-3376-01A 51 years, male, black or african american, stage:Stage I, dead, 1696 days 3765.6
TCGA-CJ-4878-01A 71 years, female, white, stage:Stage III, alive, 2186 days 3764.6
TCGA-BP-4173-01A 47 years, male, white, stage:Stage II, alive, 1893 days 3763.0
TCGA-BP-4774-01A 57 years, female, white, stage:Stage I, alive, 1885 days 3762.4
TCGA-CZ-4856-01A 62 years, female, white, stage:Stage I, alive, 18 days 3761.0
TCGA-B0-5713-01A 75 years, female, white, stage:Stage III, alive, 2782 days 3757.7
TCGA-AK-3451-01A 48 years, male, white, stage:Stage II, alive, 2868 days 3757.5
TCGA-DV-A4W0-01A 55 years, male, black or african american, stage:Stage I, alive, 2470 days 3735.1
TCGA-AK-3455-01A 71 years, female, white, stage:Stage III, dead, 683 days 3733.8
TCGA-B0-5099-01A 88 years, female, white, stage:Stage III, dead, 485 days 3733.8
TCGA-BP-5176-01A 78 years, female, white, stage:Stage I, dead, 1590 days 3729.4
TCGA-BP-5183-01A 57 years, male, white, stage:Stage III, alive, 1291 days 3716.1
TCGA-BP-5004-01A 53 years, male, white, stage:Stage I, alive, 1126 days 3707.8
TCGA-B0-4700-01A 60 years, male, white, stage:Stage IV, dead, 1980 days 3694.0
TCGA-BP-4965-01A 46 years, male, white, stage:Stage I, alive, 1871 days 3691.0
TCGA-BP-4769-01A 63 years, male, white, stage:Stage I, alive, 1876 days 3687.3
TCGA-B8-5162-01A 62 years, male, white, stage:Stage II, alive, 36 days 3653.9
TCGA-A3-3363-01A 50 years, male, asian, stage:Stage II, alive, 319 days 3641.6
TCGA-BP-5178-01A 71 years, male, white, stage:Stage IV, dead, 1912 days 3640.0
TCGA-B0-5703-01A 73 years, male, white, stage:Stage I, alive, 2246 days 3636.1
TCGA-BP-4174-01A 49 years, male, white, stage:Stage II, alive, 1879 days 3631.6
TCGA-BP-4985-01A 72 years, male, white, stage:Stage III, dead, 952 days 3621.5
TCGA-CZ-4863-01A 51 years, female, white, stage:Stage III, alive, 1928 days 3619.1
TCGA-BP-5198-01A 72 years, male, white, stage:Stage III, alive, 603 days 3610.4
TCGA-BP-4968-01A 40 years, male, white, stage:Stage I, alive, 1746 days 3601.9
TCGA-BP-4776-01A 52 years, male, white, stage:Stage I, alive, 411 days 3601.2
TCGA-A3-3335-01A 41 years, male, white, stage:Stage II, alive, 1886 days 3595.3
TCGA-B0-4846-01A 52 years, male, white, stage:Stage IV, dead, 1200 days 3592.8
TCGA-CJ-4644-01A 48 years, female, white, stage:Stage IV, dead, 336 days 3592.7
TCGA-B0-5106-01A 64 years, male, white, stage:Stage I, dead, 1598 days 3587.4
TCGA-B0-5107-01A 65 years, female, white, stage:Stage IV, dead, 927 days 3582.0
TCGA-B8-A54J-01A 60 years, male, black or african american, stage:Stage II, alive, 528 days 3569.9
TCGA-B0-4837-01A 63 years, male, white, stage:Stage I, dead, 1378 days 3569.0
TCGA-CW-5591-01A 56 years, male, white, stage:Stage IV, alive, 2271 days 3568.4
TCGA-BP-4994-01A 54 years, male, white, stage:Stage I, alive, 1308 days 3567.7
TCGA-B0-4839-01A 80 years, female, white, stage:Stage I, dead, 1639 days 3559.3
TCGA-B0-4693-01A 72 years, female, white, stage:Stage III, dead, 77 days 3558.8
TCGA-B0-4714-01A 81 years, male, white, stage:Stage IV, dead, 99 days 3555.6
TCGA-B8-5550-01A 71 years, male, white, stage:Stage III, alive, 1476 days 3550.5
TCGA-BP-4999-01A 56 years, male, white, stage:Stage I, alive, 1266 days 3546.9
TCGA-A3-3320-01A 52 years, female, white, stage:Stage I, alive, 1508 days 3538.8
TCGA-B0-4824-01A 49 years, female, white, stage:Stage I, dead, 1657 days 3530.8
TCGA-B0-5077-01A 77 years, male, white, stage:Stage I, dead, 1317 days 3522.6
TCGA-CZ-5470-01A 72 years, female, stage:Stage II, alive, 386 days 3520.7
TCGA-B0-5083-01A 63 years, male, white, stage:Stage I, dead, 1045 days 3517.6
TCGA-CZ-5455-01A 63 years, male, white, stage:Stage IV, dead, 561 days 3515.6
TCGA-A3-3308-01A 77 years, female, white, stage:Stage III, alive, 16 days 3494.9
TCGA-DV-5573-01A 41 years, male, white, stage:Stage I, alive, 1130 days 3493.4
TCGA-BP-4963-01A 63 years, male, white, stage:Stage I, alive, 1834 days 3490.7
TCGA-BP-4165-01A 64 years, female, white, stage:Stage I, alive, 3037 days 3468.6
TCGA-A3-3347-01A 76 years, female, white, stage:Stage III, dead, 1610 days 3448.6
TCGA-BP-4341-01A 67 years, male, white, stage:Stage III, dead, 1589 days 3446.7
TCGA-DV-5565-01A 59 years, male, white, stage:Stage I, alive, 1329 days 3444.4
TCGA-BP-4354-01A 40 years, male, white, stage:Stage IV, dead, 1034 days 3436.3
TCGA-CZ-5468-01A 84 years, male, white, stage:Stage IV, dead, 59 days 3420.8
TCGA-CJ-4873-01A 85 years, female, white, stage:Stage III, alive, 1776 days 3409.7
TCGA-BP-4962-01A 58 years, male, white, stage:Stage II, alive, 1785 days 3386.5
TCGA-BP-4758-01A 40 years, male, white, stage:Stage I, alive, 2208 days 3383.4
TCGA-BP-5200-01A 44 years, male, white, stage:Stage II, alive, 1063 days 3378.7
TCGA-CJ-5686-01A 59 years, female, white, stage:Stage I, alive, 2038 days 3377.1
TCGA-B8-4148-01A 63 years, female, white, stage:Stage I, alive, 1520 days 3376.2
TCGA-BP-5201-01A 63 years, male, white, stage:Stage IV, alive, 951 days 3360.8
TCGA-A3-3311-01A 57 years, male, stage:Stage I, dead, 1191 days 3357.1
TCGA-BP-4337-01A 76 years, female, white, stage:Stage III, dead, 2 days 3345.0
TCGA-CJ-4889-01A 63 years, female, white, stage:Stage I, alive, 1946 days 3342.1
TCGA-BP-4345-01A 62 years, male, white, stage:Stage III, alive, 1516 days 3339.2
TCGA-BP-4787-01A 59 years, female, white, stage:Stage IV, dead, 480 days 3333.9
TCGA-B0-4699-01A 74 years, male, white, stage:Stage IV, dead, 110 days 3321.6
TCGA-B8-5546-01A 38 years, female, black or african american, stage:Stage I, alive, 505 days 3317.2
TCGA-B8-5164-01A 65 years, male, white, stage:Stage III, alive, 26 days 3316.0
TCGA-AK-3447-01A 83 years, male, white, stage:Stage II, alive, 1217 days 3313.5
TCGA-CZ-5987-01A 60 years, male, white, stage:Stage IV, dead, 445 days 3310.3
TCGA-CJ-4890-01A 72 years, male, white, stage:Stage IV, alive, 3519 days 3308.1
TCGA-B8-A54G-01A 50 years, male, black or african american, stage:Stage I, alive, 53 days 3301.1
TCGA-B0-4821-01A 68 years, female, asian, stage:Stage III, dead, 1230 days 3294.3
TCGA-A3-3359-01A 82 years, female, white, stage:Stage I, alive, 2504 days 3288.8
TCGA-B0-4707-01A 63 years, male, white, stage:Stage III, dead, 600 days 3280.0
TCGA-B8-5163-01A 63 years, female, white, stage:Stage III, alive, 822 days 3232.0
TCGA-AK-3450-01A 85 years, female, white, stage:Stage I, alive, 1508 days 3231.5
TCGA-BP-4797-01A 34 years, male, white, stage:Stage III, alive, 1107 days 3220.7
TCGA-B0-5096-01A 72 years, female, white, stage:Stage III, dead, 68 days 3207.3
TCGA-CJ-4882-01A 57 years, male, black or african american, stage:Stage III, alive, 1883 days 3204.3
TCGA-CZ-4866-01A 79 years, female, white, stage:Stage I, alive, 3267 days 3198.5
TCGA-BP-5173-01A 75 years, male, white, stage:Stage I, dead, 62 days 3196.5
TCGA-CJ-4641-01A 55 years, female, white, stage:Stage IV, dead, 1661 days 3186.5
TCGA-CJ-4637-01A 52 years, female, white, stage:Stage IV, dead, 2227 days 3185.1
TCGA-CZ-5985-01A 58 years, male, white, stage:Stage II, alive, 1997 days 3152.3
TCGA-BP-4340-01A 70 years, female, white, stage:Stage I, dead, 562 days 3151.7
TCGA-B0-4818-01A 68 years, female, white, stage:Stage II, dead, 510 days 3150.8
TCGA-CJ-4869-01A 49 years, male, white, stage:Stage III, alive, 2554 days 3148.5
TCGA-BP-4162-01A 65 years, female, white, stage:Stage I, alive, 3074 days 3129.6
TCGA-B0-5692-01A 66 years, female, white, stage:Stage III, alive, 3944 days 3113.2
TCGA-BP-4349-01A 68 years, female, white, stage:Stage I, alive, 372 days 3096.4
TCGA-CZ-4864-01A 86 years, male, white, stage:Stage II, dead, 1315 days 3085.4
TCGA-B0-5121-01A 56 years, male, white, stage:Stage I, alive, 1485 days 3081.7
TCGA-CJ-5680-01A 65 years, female, white, stage:Stage IV, dead, 768 days 3071.0
TCGA-A3-3324-01A 51 years, male, white, stage:Stage I, alive, 1186 days 3060.6
TCGA-B2-5635-01A 74 years, male, white, stage:Stage I, alive, 755 days 3057.5
TCGA-B0-5712-01A 68 years, female, black or african american, stage:Stage IV, alive, 2722 days 3056.7
TCGA-CW-6087-01A 61 years, male, white, stage:Stage IV, dead, 41 days 3029.9
TCGA-CJ-4893-01A 76 years, female, white, stage:Stage I, alive, 750 days 3029.8
TCGA-BP-4352-01A 74 years, female, white, stage:Stage IV, dead, 344 days 3020.8
TCGA-A3-3331-01A 86 years, female, white, stage:Stage I, alive, 1257 days 3010.5
TCGA-A3-3319-01A 70 years, male, white, stage:Stage I, alive, 1130 days 2988.4
TCGA-AK-3433-01A 48 years, female, white, stage:Stage II, alive, 3409 days 2984.2
TCGA-AK-3426-01A 37 years, male, white, stage:Stage III, dead, 885 days 2979.8
TCGA-BP-4347-01A 74 years, male, white, stage:Stage III, alive, 1367 days 2974.4
TCGA-BP-4798-01A 74 years, male, white, stage:'--, dead, 334 days 2970.2
TCGA-BP-4325-01A 64 years, female, white, stage:Stage I, alive, 2964 days 2960.9
TCGA-A3-3357-01A 62 years, male, white, stage:Stage II, alive, 2688 days 2956.3
TCGA-CJ-4887-01A 48 years, male, white, stage:Stage IV, dead, 932 days 2956.0
TCGA-CW-5587-01A 62 years, female, white, stage:Stage III, alive, 2226 days 2952.5
TCGA-B8-5551-01A 65 years, female, black or african american, stage:Stage I, alive, 16 days 2934.9
TCGA-B0-4822-01A 78 years, male, white, stage:Stage II, dead, 1111 days 2913.0
TCGA-CJ-4636-01A 51 years, male, white, stage:Stage III, alive, 1924 days 2903.1
TCGA-B0-5400-01A 59 years, female, white, stage:Stage III, alive, 1733 days 2892.8
TCGA-BP-4977-01A 57 years, male, white, stage:Stage I, alive, 454 days 2859.2
TCGA-CJ-4881-01A 41 years, male, white, stage:Stage III, alive, 2014 days 2857.1
TCGA-BP-4346-01A 57 years, male, white, stage:Stage III, dead, 1493 days 2856.8
TCGA-B0-5701-01A 65 years, male, white, stage:Stage III, alive, 2461 days 2846.0
TCGA-BP-4771-01A 62 years, male, white, stage:Stage IV, dead, 162 days 2843.5
TCGA-B0-4827-01A 77 years, female, white, stage:Stage III, dead, 885 days 2841.5
TCGA-B2-4102-01A 61 years, male, white, stage:Stage I, alive, 952 days 2833.2
TCGA-B0-4838-01A 69 years, female, white, stage:Stage I, dead, 834 days 2832.0
TCGA-CZ-5462-01A 83 years, male, white, stage:Stage IV, dead, 311 days 2821.9
TCGA-B2-5639-01A 46 years, male, white, stage:Stage IV, dead, 1003 days 2808.3
TCGA-BP-4338-01A 43 years, male, white, stage:Stage I, alive, 2859 days 2792.4
TCGA-BP-4766-01A 43 years, female, white, stage:Stage I, alive, 1462 days 2783.3
TCGA-AK-3440-01A 58 years, male, white, stage:Stage I, alive, 2865 days 2772.1
TCGA-BP-4335-01A 65 years, female, white, stage:Stage IV, dead, 475 days 2755.7
TCGA-BP-4799-01A 70 years, male, white, stage:Stage III, dead, 1133 days 2669.2
TCGA-A3-3317-01A 67 years, male, stage:Stage II, alive, 1491 days 2664.8
TCGA-CJ-5672-01A 84 years, male, white, stage:Stage I, dead, 1972 days 2663.8
TCGA-CJ-4916-01A 69 years, female, white, stage:Stage III, alive, 1373 days 2654.0
TCGA-BP-4960-01A 46 years, male, white, stage:Stage II, alive, 2172 days 2644.6
TCGA-BP-4777-01A 46 years, male, white, stage:Stage I, alive, 1731 days 2639.4
TCGA-A3-3373-01A 54 years, female, white, stage:Stage I, alive, 1621 days 2615.0
TCGA-B0-4833-01A 82 years, female, white, stage:Stage I, dead, 2386 days 2613.7
TCGA-CJ-6032-01A 63 years, female, white, stage:Stage II, alive, 3639 days 2613.5
TCGA-BP-4981-01A 75 years, female, white, stage:Stage III, dead, 1097 days 2607.4
TCGA-B0-5707-01A 39 years, female, white, stage:Stage I, alive, 3744 days 2589.7
TCGA-B0-5088-01A 53 years, male, white, stage:Stage I, dead, 563 days 2588.7
TCGA-CJ-4876-01A 57 years, male, white, stage:Stage II, alive, 1955 days 2574.2
TCGA-B0-4815-01A 65 years, male, white, stage:Stage III, dead, 1588 days 2566.1
TCGA-AK-3454-01A 84 years, male, white, stage:Stage I, alive, 874 days 2536.6
TCGA-B0-4811-01A 48 years, male, white, stage:Stage III, dead, 1417 days 2530.8
TCGA-B0-5697-01A 50 years, male, white, stage:Stage I, alive, 2630 days 2520.3
TCGA-BP-5000-01A 40 years, male, white, stage:Stage I, alive, 563 days 2515.9
TCGA-B0-5109-01A 69 years, male, white, stage:Stage III, dead, 587 days 2473.4
TCGA-CJ-5681-01A 44 years, female, white, stage:Stage IV, dead, 552 days 2460.0
TCGA-CJ-4912-01A 61 years, male, white, stage:Stage II, alive, 1657 days 2456.3
TCGA-A3-3328-01A 79 years, male, white, stage:Stage I, alive, 1385 days 2435.7
TCGA-BP-5191-01A 79 years, male, white, stage:Stage III, alive, 967 days 2407.9
TCGA-B0-5092-01A 53 years, female, white, stage:Stage IV, dead, 459 days 2407.0
TCGA-BP-5009-01A 52 years, male, white, stage:Stage I, dead, 1092 days 2398.5
TCGA-B0-4843-01A 57 years, male, white, stage:Stage III, dead, 320 days 2376.1
TCGA-CJ-4884-01A 72 years, female, white, stage:Stage III, alive, 1759 days 2372.6
TCGA-BP-5010-01A 63 years, male, white, stage:Stage III, dead, 878 days 2363.1
TCGA-BP-5175-01A 60 years, male, white, stage:Stage I, alive, 932 days 2362.4
TCGA-B0-4842-01A 73 years, female, white, stage:Stage III, dead, 1724 days 2358.4
TCGA-B0-4945-01A 75 years, female, white, stage:Stage I, dead, 2145 days 2325.3
TCGA-CJ-4875-01A 67 years, male, white, stage:Stage IV, dead, 3554 days 2322.3
TCGA-AK-3453-01A 58 years, female, white, stage:Stage II, alive, 2531 days 2319.0
TCGA-B0-5081-01A 79 years, female, white, stage:Stage III, dead, 362 days 2312.9
TCGA-MM-A84U-01A 58 years, female, black or african american, stage:Stage I, alive, 700 days 2303.8
TCGA-AS-3777-01A 63 years, male, white, stage:Stage I, alive, 1238 days 2303.1
TCGA-B0-5702-01A 71 years, male, white, stage:Stage I, alive, 2172 days 2285.6
TCGA-BP-5185-01A 56 years, male, white, stage:Stage I, alive, 1132 days 2276.5
TCGA-CJ-4900-01A 69 years, female, white, stage:Stage IV, dead, 1714 days 2270.8
TCGA-AK-3443-01A 45 years, male, white, stage:Stage II, alive, 1423 days 2251.2
TCGA-CJ-4888-01A 59 years, male, white, stage:Stage IV, dead, 1567 days 2192.4
TCGA-B8-A54D-01A 69 years, male, black or african american, stage:Stage III, alive, 830 days 2184.9
TCGA-B0-4817-01A 81 years, male, white, stage:Stage III, dead, 1019 days 2178.9
TCGA-AK-3456-01A 48 years, male, black or african american, stage:Stage II, alive, 1143 days 2160.7
TCGA-B0-4819-01A 60 years, female, white, stage:Stage IV, dead, 183 days 2160.2
TCGA-B0-5706-01A 45 years, male, white, stage:Stage II, alive, 3205 days 2113.1
TCGA-BP-4969-01A 63 years, female, white, stage:Stage I, alive, 1794 days 2076.5
TCGA-B0-4847-01A 60 years, male, white, stage:Stage IV, dead, 793 days 2060.8
TCGA-A3-3374-01A 51 years, female, black or african american, stage:Stage I, alive, 1314 days 2059.7
TCGA-BP-5174-01A 45 years, female, white, stage:Stage I, alive, 2257 days 2033.1
TCGA-B0-4841-01A 63 years, male, white, stage:Stage IV, dead, 204 days 2017.0
TCGA-B0-5075-01A 77 years, female, white, stage:Stage III, dead, 637 days 1985.7
TCGA-G6-A8L7-01A 81 years, female, black or african american, stage:Stage I, alive, 2133 days 1891.3
TCGA-B0-5085-01A 76 years, female, white, stage:Stage III, dead, 770 days 1881.2
TCGA-A3-3378-01A 60 years, male, white, stage:Stage I, alive, 630 days 1872.2
TCGA-B2-4098-01A 72 years, female, black or african american, stage:Stage I, dead, 51 days 1831.3
TCGA-A3-3313-01A 59 years, male, black or african american, stage:Stage I, dead, 735 days 1817.2
TCGA-DV-A4VX-01A 59 years, male, black or african american, stage:Stage IV, dead, 1626 days 1810.1
TCGA-BP-5001-01A 43 years, female, white, stage:Stage I, alive, 1177 days 1789.3
TCGA-BP-4334-01A 56 years, male, white, stage:Stage III, dead, 645 days 1781.7
TCGA-CJ-4891-01A 57 years, female, white, stage:Stage III, dead, 819 days 1715.6
TCGA-B0-4697-01A 46 years, female, white, stage:Stage IV, dead, 578 days 1712.7
TCGA-6D-AA2E-01A 68 years, female, black or african american, stage:Stage I, alive, 362 days 1697.4
TCGA-B2-3923-01A 59 years, male, white, stage:Stage II, alive, 992 days 1680.0
TCGA-BP-4971-01A 40 years, male, white, stage:Stage III, alive, 1487 days 1679.6
TCGA-B8-4619-01A 58 years, male, white, stage:Stage I, alive, 523 days 1662.9
TCGA-BP-5169-01A 70 years, male, white, stage:Stage I, alive, 193 days 1583.7
TCGA-CJ-4638-01A 46 years, female, white, stage:Stage IV, dead, 431 days 1553.8
TCGA-BP-4989-01A 58 years, male, white, stage:Stage III, alive, 118 days 1552.7
TCGA-BP-5190-01A 61 years, male, white, stage:Stage I, alive, 1011 days 1552.3
TCGA-G6-A5PC-01A 54 years, female, black or african american, stage:Stage IV, dead, 242 days 1552.1
TCGA-B8-A54I-01A 48 years, male, black or african american, stage:Stage I, alive, 150 days 1528.3
TCGA-B0-4834-01A 49 years, male, white, stage:Stage I, dead, 2090 days 1432.3
TCGA-B8-4621-01A 63 years, male, black or african american, stage:Stage I, alive, 788 days 1400.8
TCGA-T7-A92I-01A 47 years, female, black or african american, stage:Stage I, alive, 356 days 1388.1
TCGA-AK-3465-01A 71 years, female, black or african american, stage:Stage I, alive, 369 days 1339.3
TCGA-BP-4756-01A 62 years, female, asian, stage:Stage I, alive, 374 days 1280.5
TCGA-B0-5117-01A 40 years, male, white, stage:Stage I, alive, 1608 days 951.2
TCGA-BP-4992-01A 66 years, male, white, stage:Stage I, alive, 501 days 944.4
TCGA-CZ-5989-01A 60 years, male, white, stage:Stage II, alive, 1905 days 633.9
TCGA-B8-A54E-01A 62 years, female, black or african american, stage:Stage I, alive, 909 days 619.7
TCGA-B4-5832-01A 65 years, male, white, stage:Stage III, alive, 155 days 509.4
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KIDNEY RENAL CLEAR CELL CARCINOMA (VALIDATION) - Interactive survival scatter ploti

The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.

The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".

Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.

Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.

& Survival analysisi

Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.

RPL10 is not prognostic in Kidney Renal Clear Cell Carcinoma (validation)


Stage:



Survival analysis
Current cut offi

Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.

:
Best expression cut offi

Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .

When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.

: 3168.96
Median expressioni

Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.

: N/A
Median follow up timei

Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.

: N/A
P scorei

Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.

N/A
5-year survival highi

5-year survival for patients with higher expression than the expression cutoff.

For melanoma and glioma, 3-year survival is shown.

N/A
5-year survival lowi

5-year survival for patients with lower expression than the expression cutoff.

For melanoma and glioma, 3-year survival is shown.

N/A
TCGA RNA samplesi

RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.

Average pTPM 3865.7
Number of samples 100
Samples
Sample Description pTPM
ccRCC-24 91 years, male, NA, stage:pT3bN0M0, dead, 750 days 9279.2
ccRCC-50 68 years, male, NA, stage:pT3bN0M0, alive, 900 days 9143.5
ccRCC-46 61 years, male, NA, stage:pT1bN0M0, alive, 990 days 8139.3
ccRCC-97 40 years, male, NA, stage:pT1aN2M1, dead, 990 days 7595.4
ccRCC-90 72 years, male, NA, stage:pT1aN0M0, dead, 1170 days 7582.7
ccRCC-87 40 years, male, NA, stage:pT1bN0M0, alive, 2370 days 7477.5
ccRCC-41 82 years, male, NA, stage:pT3bN0M0, dead, 540 days 7049.5
ccRCC-6 75 years, male, NA, stage:pT1bN0M0, alive, 2820 days 6634.1
ccRCC-91 67 years, male, NA, stage:pT1aN0M0, dead, 1890 days 6403.2
ccRCC-106 58 years, male, NA, stage:pT1aN0M0, dead, 1890 days 6384.3
ccRCC-85 73 years, female, NA, stage:pT1bN0M0, alive, 3330 days 6262.3
ccRCC-51 70 years, male, NA, stage:pT3aN0M0, alive, 1410 days 5741.5
ccRCC-55 58 years, female, NA, stage:pT3bN0M0, alive, 1260 days 5730.1
ccRCC-86 74 years, female, NA, stage:pT1bN0M0, alive, 3390 days 5651.6
ccRCC-30 64 years, male, NA, stage:pT2N0M0, dead, 420 days 5577.3
ccRCC-96 52 years, male, NA, stage:pT1aN0M0, alive, 3930 days 5302.6
ccRCC-38 60 years, male, NA, stage:pT1aN0M0, alive, 1380 days 5138.7
ccRCC-94 69 years, male, NA, stage:pT1bN0M0, dead, 480 days 4850.5
ccRCC-1 58 years, female, NA, stage:pT1bN0M0, alive, 3330 days 4761.1
ccRCC-93 60 years, male, NA, stage:pT1bN0M0, alive, 3660 days 4755.8
ccRCC-62 78 years, male, NA, stage:pT1bN0M0, alive, 1620 days 4753.7
ccRCC-32 55 years, male, NA, stage:pT2N0M0, dead, 1320 days 4576.4
ccRCC-66 73 years, female, NA, stage:pT3bN0M1, alive, 2520 days 4525.1
ccRCC-99 60 years, female, NA, stage:pT2N0M0, alive, 3330 days 4522.1
ccRCC-95 59 years, male, NA, stage:pT1bN0M0, alive, 3960 days 4410.9
ccRCC-67 59 years, male, NA, stage:pT1aN0M0, dead, 1260 days 4269.4
ccRCC-34 65 years, male, NA, stage:pT3bN0M1, alive, 1530 days 4265.2
ccRCC-16 48 years, male, NA, stage:pT2N0M0, alive, 2190 days 4232.5
ccRCC-88 64 years, male, NA, stage:pT1aN0M0, alive, 2880 days 4211.2
ccRCC-69 80 years, male, NA, stage:pT1aN0M0, alive, 2670 days 4111.2
ccRCC-79 35 years, male, NA, stage:pT1bN0M0, alive, 2670 days 4079.9
ccRCC-100 65 years, male, NA, stage:pT1aN0M0, alive, 4260 days 4053.3
ccRCC-56 78 years, male, NA, stage:pT1aN0M0, alive, 1950 days 4052.8
ccRCC-14 58 years, male, NA, stage:pT3cN0M0, alive, 2280 days 4045.7
ccRCC-103 55 years, female, NA, stage:pT1aN0M0, alive, 4350 days 4025.3
ccRCC-11 76 years, male, NA, stage:pT1aN0M0, alive, 2370 days 4017.1
ccRCC-48 42 years, male, NA, stage:pT1bN0M0, alive, 990 days 3895.2
ccRCC-8 73 years, male, NA, stage:pT1bN0M0, alive, 2400 days 3867.9
ccRCC-40 65 years, male, NA, stage:pT1aN0M0, alive, 1020 days 3855.4
ccRCC-23 72 years, male, NA, stage:pT1bN0M0, alive, 1170 days 3828.1
ccRCC-72 35 years, male, NA, stage:pT1bN0M0, alive, 2760 days 3820.8
ccRCC-44 56 years, female, NA, stage:pT1bN0M0, alive, 1050 days 3769.9
ccRCC-84 69 years, male, NA, stage:pT1bN0M0, alive, 2010 days 3766.3
ccRCC-71 72 years, male, NA, stage:pT1bN0M0, alive, 2160 days 3726.8
ccRCC-82 53 years, male, NA, stage:pT1aN0M0, alive, 3090 days 3721.0
ccRCC-60 78 years, female, NA, stage:pT1aN0M0, alive, 1470 days 3683.6
ccRCC-77 41 years, male, NA, stage:pT1bN0M0, alive, 1860 days 3661.6
ccRCC-104 52 years, female, NA, stage:pT1aN0M0, alive, 3480 days 3646.2
ccRCC-42 73 years, male, NA, stage:pT3aN0M0, alive, 1170 days 3545.3
ccRCC-52 66 years, female, NA, stage:pT3bN0M1, alive, 1350 days 3511.6
ccRCC-70 70 years, male, NA, stage:pT4N0M1, dead, 540 days 3471.3
ccRCC-35 67 years, male, NA, stage:pT1aN0M0, alive, 1380 days 3421.7
ccRCC-68 69 years, male, NA, stage:pT1bN0M0, alive, 2640 days 3407.9
ccRCC-92 59 years, male, NA, stage:pT1aN0M0, alive, 3660 days 3376.0
ccRCC-58 62 years, male, NA, stage:pT1aN0M0, alive, 1110 days 3349.2
ccRCC-64 58 years, male, NA, stage:pT3aN0M0, alive, 2430 days 3330.8
ccRCC-89 59 years, male, NA, stage:pT1aN0M0, alive, 3510 days 3312.9
ccRCC-61 56 years, male, NA, stage:pT1aN0M0, alive, 1470 days 3300.9
ccRCC-73 56 years, male, NA, stage:pT1aN0M0, alive, 2640 days 3286.9
ccRCC-7 87 years, female, NA, stage:pT2N0M0, alive, 330 days 3235.6
ccRCC-53 69 years, male, NA, stage:pT1aN0M0, alive, 1260 days 3228.2
ccRCC-80 70 years, male, NA, stage:pT2N0M0, alive, 3000 days 3222.0
ccRCC-54 57 years, male, NA, stage:pT1bN0M0, alive, 1200 days 3181.1
ccRCC-31 75 years, male, NA, stage:pT1aN0M0, alive, 1560 days 3179.8
ccRCC-3 71 years, male, NA, stage:pT3bN1M0, dead, 240 days 3158.1
ccRCC-12 80 years, male, NA, stage:pT1aN0M0, alive, 900 days 3137.4
ccRCC-9 75 years, male, NA, stage:pT2N1M1, dead, 360 days 3136.8
ccRCC-25 65 years, male, NA, stage:pT1aN0M0, alive, 1350 days 3122.6
ccRCC-75 58 years, male, NA, stage:pT3aN1M1, dead, 180 days 3121.6
ccRCC-18 56 years, female, NA, stage:pT1aN0M0, alive, 2130 days 3021.7
ccRCC-10 76 years, male, NA, stage:pT3aN2M1, dead, 90 days 3021.6
ccRCC-29 73 years, female, NA, stage:pT1aN0M0, alive, 1710 days 3010.6
ccRCC-20 56 years, female, NA, stage:pT3aN0M1, alive, 930 days 2995.4
ccRCC-4 82 years, male, NA, stage:pT1bN0M0, dead, 270 days 2988.9
ccRCC-17 54 years, female, NA, stage:pT1bN0M0, alive, 2220 days 2978.9
ccRCC-59 56 years, male, NA, stage:pT1bN0M0, alive, 930 days 2938.2
ccRCC-21 70 years, male, NA, stage:pT1bN0M0, alive, 1080 days 2875.8
ccRCC-105 59 years, male, NA, stage:pT1aN0M0, alive, 2190 days 2863.6
ccRCC-83 72 years, male, NA, stage:pT1aN0M0, alive, 300 days 2789.9
ccRCC-13 44 years, female, NA, stage:pT3aN2M0, dead, 540 days 2732.1
ccRCC-5 77 years, male, NA, stage:pT1aN0M0, alive, 2940 days 2716.7
ccRCC-76 81 years, female, NA, stage:pT3aN0M1, dead, 960 days 2683.7
ccRCC-81 73 years, male, NA, stage:pT3aN2M0, dead, 1290 days 2552.4
ccRCC-45 61 years, male, NA, stage:pT1aN0M0, alive, 1020 days 2536.0
ccRCC-27 56 years, male, NA, stage:pT1aN0M0, alive, 1590 days 2533.4
ccRCC-19 39 years, female, NA, stage:pT2N0M0, alive, 2100 days 2492.1
ccRCC-65 63 years, male, NA, stage:pT3bN0M1, dead, 300 days 2341.6
ccRCC-22 64 years, male, NA, stage:pT3bN0M0, dead, 330 days 2305.3
ccRCC-26 51 years, male, NA, stage:pT1bN0M0, alive, 1800 days 2302.8
ccRCC-78 70 years, female, NA, stage:pT1aN0M0, alive, 2610 days 2290.3
ccRCC-39 73 years, male, NA, stage:pT2N0M0, alive, 900 days 2159.5
ccRCC-15 65 years, female, NA, stage:pT2N0M0, dead, 2070 days 2131.9
ccRCC-102 53 years, male, NA, stage:pT1bN0M0, alive, 4260 days 2040.2
ccRCC-28 59 years, male, NA, stage:pT1bN0M0, alive, 1530 days 2013.4
ccRCC-49 64 years, male, NA, stage:pT3bN0M0, alive, 1290 days 1898.4
ccRCC-98 54 years, male, NA, stage:pT1aN0M0, alive, 30 days 1804.4
ccRCC-43 55 years, female, NA, stage:pT1bN0M0, alive, 1050 days 1780.8
ccRCC-36 59 years, male, NA, stage:pT2N0M0, alive, 1410 days 1602.5
ccRCC-2 71 years, male, NA, stage:pT1aN0M1, dead, 2190 days 1175.2
ccRCC-37 73 years, female, NA, stage:pT1aN0M0, alive, 1500 days 1109.2
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KIDNEY RENAL PAPILLARY CELL CARCINOMA (TCGA) - Interactive survival scatter ploti

The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.

The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".

Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.

Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.

& Survival analysisi

Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.

RPL10 is potential prognostic, high expression is unfavorable in Kidney Renal Papillary Cell Carcinoma (TCGA)


Stage:

Survival analysis
Current cut offi

Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.

:
Best expression cut offi

Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .

When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.

: 2764.92
Median expressioni

Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.

: N/A
Median follow up timei

Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.

: N/A
P scorei

Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.

N/A
5-year survival highi

5-year survival for patients with higher expression than the expression cutoff.

For melanoma and glioma, 3-year survival is shown.

N/A
5-year survival lowi

5-year survival for patients with lower expression than the expression cutoff.

For melanoma and glioma, 3-year survival is shown.

N/A
TCGA RNA samplesi

RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.

Average pTPM 2088.7
Number of samples 282
Samples
Sample Description pTPM
TCGA-DZ-6131-01A 31 years, male, white, stage:Stage III, alive, 2429 days 8554.8
TCGA-G7-6789-01A 53 years, female, white, stage:Stage IV, dead, 122 days 8216.2
TCGA-GL-7966-01A 28 years, female, white, stage:Stage III, alive, 112 days 7533.3
TCGA-UN-AAZ9-01A 76 years, female, black or african american, stage:Stage I, alive, 548 days 6661.1
TCGA-2Z-A9J9-01A 77 years, male, black or african american, stage:Stage I, alive, 2294 days 6627.5
TCGA-5P-A9K4-01A 54 years, male, white, stage:'--, alive, 2184 days 5754.6
TCGA-BQ-5877-01A 60 years, male, black or african american, stage:Stage IV, dead, 270 days 5213.2
TCGA-B3-3926-01A 59 years, female, white, stage:Stage I, alive, 883 days 4963.8
TCGA-BQ-5882-01A 54 years, male, stage:Stage III, dead, 658 days 4783.3
TCGA-5P-A9K9-01A 59 years, female, white, stage:'--, dead, 589 days 4553.0
TCGA-5P-A9JV-01A 49 years, male, white, stage:'--, alive, 2043 days 4459.6
TCGA-B3-4104-01A 75 years, male, white, stage:Stage II, alive, 1049 days 4427.0
TCGA-AL-A5DJ-01A 54 years, female, white, stage:Stage III, dead, 1498 days 4390.6
TCGA-2Z-A9J2-01A 71 years, female, white, stage:Stage I, alive, 1795 days 4379.8
TCGA-IA-A40Y-01A 60 years, female, white, stage:Stage III, alive, 62 days 4371.3
TCGA-B1-A654-01A 43 years, female, black or african american, stage:Stage I, alive, 616 days 4225.9
TCGA-2Z-A9J7-01A 63 years, male, white, stage:Stage IV, dead, 139 days 4204.9
TCGA-4A-A93X-01A 58 years, male, white, stage:Stage IV, alive, 390 days 4134.4
TCGA-HE-7130-01A female, stage:Stage III, alive, 1770 days 4102.8
TCGA-BQ-5879-01A 32 years, female, white, stage:Stage III, dead, 697 days 4076.2
TCGA-MH-A561-01A 66 years, male, white, stage:Stage I, alive, 841 days 4057.1
TCGA-SX-A71S-01A 66 years, female, white, stage:Stage I, alive, 1504 days 4028.4
TCGA-IA-A83T-01A 80 years, male, white, stage:'--, dead, 2684 days 3980.4
TCGA-2Z-A9JJ-01A 69 years, female, white, stage:Stage I, alive, 1213 days 3948.4
TCGA-BQ-5878-01A 79 years, female, white, stage:Stage III, alive, 1938 days 3839.2
TCGA-BQ-5892-01A 51 years, male, white, stage:Stage I, alive, 364 days 3825.6
TCGA-B1-A656-01A 64 years, male, white, stage:Stage I, alive, 618 days 3778.9
TCGA-P4-AAVO-01A 69 years, male, white, stage:Stage I, alive, 2400 days 3744.6
TCGA-DW-7842-01A 52 years, male, white, stage:Stage I, alive, 92 days 3632.5
TCGA-G7-6793-01A 60 years, female, white, stage:Stage IV, dead, 336 days 3602.0
TCGA-UZ-A9PR-01A 84 years, male, white, stage:Stage I, alive, 2191 days 3595.3
TCGA-P4-A5EA-01A 54 years, female, white, stage:Stage III, dead, 201 days 3592.8
TCGA-A4-7828-01A 74 years, female, black or african american, stage:Stage I, alive, 238 days 3568.3
TCGA-DW-7841-01A 61 years, male, black or african american, stage:Stage I, alive, 445 days 3426.9
TCGA-UZ-A9PJ-01A 78 years, male, white, stage:Stage I, dead, 797 days 3423.1
TCGA-AL-3473-01A 55 years, male, white, stage:Stage II, alive, 1906 days 3405.2
TCGA-B9-4117-01A 48 years, female, black or african american, stage:'--, alive, 14 days 3399.0
TCGA-AL-3467-01A 54 years, female, white, stage:'--, alive, 2135 days 3398.0
TCGA-G7-6797-01A 46 years, male, white, stage:Stage III, alive, 765 days 3384.1
TCGA-A4-7287-01A 75 years, female, white, stage:Stage I, dead, 597 days 3381.7
TCGA-P4-A5E8-01A 57 years, male, white, stage:Stage III, dead, 1306 days 3378.4
TCGA-IA-A83V-01A 63 years, male, white, stage:Stage I, dead, 2941 days 3375.7
TCGA-BQ-7048-01A 64 years, male, white, stage:Stage III, alive, 2839 days 3349.8
TCGA-BQ-7059-01A 71 years, male, white, stage:Stage I, alive, 232 days 3305.4
TCGA-DZ-6132-01A 69 years, male, stage:Stage I, alive, 2460 days 3305.2
TCGA-B9-4116-01A 75 years, female, black or african american, stage:'--, alive, 627 days 3302.7
TCGA-B9-4115-01A 53 years, male, black or african american, stage:Stage I, alive, 803 days 3283.3
TCGA-Q2-A5QZ-01A 61 years, female, black or african american, stage:Stage III, alive, 428 days 3278.3
TCGA-2Z-A9JQ-01A 66 years, male, white, stage:Stage I, alive, 778 days 3257.3
TCGA-IZ-A6M8-01A 69 years, male, black or african american, stage:Stage I, alive, 497 days 3195.5
TCGA-5P-A9K3-01A 59 years, male, white, stage:'--, dead, 471 days 3184.8
TCGA-A4-7915-01A 35 years, female, black or african american, stage:Stage II, alive, 7 days 3168.5
TCGA-Y8-A8S0-01A 58 years, male, white, stage:Stage I, alive, 183 days 3152.7
TCGA-DW-7839-01A 58 years, female, white, stage:Stage I, alive, 419 days 3127.9
TCGA-GL-7773-01A 63 years, male, white, stage:Stage I, alive, 393 days 3113.7
TCGA-EV-5901-01A 47 years, female, white, stage:Stage I, alive, 1040 days 3105.6
TCGA-2Z-A9JE-01A 59 years, male, white, stage:Stage I, alive, 1728 days 3086.8
TCGA-BQ-7051-01A 74 years, male, white, stage:Stage II, alive, 1533 days 3042.2
TCGA-2Z-A9J8-01A 50 years, male, white, stage:Stage I, alive, 2790 days 3035.1
TCGA-F9-A4JJ-01A 35 years, female, black or african american, stage:Stage III, dead, 325 days 2999.9
TCGA-SX-A7SP-01A 66 years, female, white, stage:Stage I, dead, 496 days 2985.6
TCGA-G7-A8LE-01A 62 years, male, white, stage:Stage I, alive, 2453 days 2982.8
TCGA-HE-A5NK-01A 82 years, male, stage:'--, alive, 2228 days 2968.2
TCGA-PJ-A5Z8-01A 60 years, female, white, stage:Stage I, alive, 600 days 2962.6
TCGA-4A-A93W-01A 66 years, female, white, stage:Stage I, alive, 4 days 2935.9
TCGA-B1-5398-01A 73 years, male, white, stage:Stage III, alive, 1251 days 2928.7
TCGA-Y8-A898-01A 69 years, male, white, stage:Stage I, alive, 475 days 2901.0
TCGA-IZ-8196-01A 50 years, male, white, stage:Stage I, alive, 649 days 2894.5
TCGA-4A-A93Y-01A 63 years, female, black or african american, stage:Stage II, alive, 352 days 2887.9
TCGA-EV-5903-01A 57 years, male, white, stage:Stage I, alive, 757 days 2871.1
TCGA-A4-A5Y1-01A 75 years, male, white, stage:Stage III, dead, 395 days 2860.2
TCGA-B9-A69E-01A 71 years, male, white, stage:Stage III, alive, 452 days 2855.5
TCGA-SX-A7SM-01A 60 years, male, black or african american, stage:Stage IV, dead, 363 days 2840.3
TCGA-SX-A7SN-01A 52 years, male, white, stage:Stage I, alive, 578 days 2838.4
TCGA-2Z-A9JR-01A 57 years, male, white, stage:Stage I, alive, 161 days 2835.5
TCGA-BQ-5894-01A 42 years, male, stage:Stage IV, alive, 84 days 2825.2
TCGA-BQ-5893-01A 61 years, male, white, stage:Stage IV, dead, 241 days 2814.1
TCGA-5P-A9KA-01A 61 years, male, white, stage:'--, alive, 395 days 2809.8
TCGA-BQ-7061-01A 83 years, female, white, stage:Stage I, alive, 218 days 2803.5
TCGA-B3-8121-01A 48 years, female, black or african american, stage:Stage I, alive, 379 days 2802.5
TCGA-BQ-5889-01A 63 years, male, white, stage:Stage IV, dead, 329 days 2788.1
TCGA-IZ-A6M9-01A 63 years, male, white, stage:Stage I, alive, 376 days 2776.3
TCGA-DW-7836-01A 55 years, male, white, stage:Stage I, alive, 1093 days 2774.4
TCGA-UZ-A9PQ-01A 59 years, male, black or african american, stage:Stage III, dead, 2624 days 2764.9
TCGA-2Z-A9JL-01A 47 years, male, black or african american, stage:Stage I, alive, 1006 days 2763.3
TCGA-P4-A5EB-01A 83 years, male, white, stage:Stage I, alive, 2477 days 2748.4
TCGA-F9-A8NY-01A 38 years, female, asian, stage:Stage IV, alive, 36 days 2746.6
TCGA-HE-A5NH-01A 62 years, male, stage:Stage I, alive, 791 days 2711.2
TCGA-P4-A5ED-01A 51 years, male, white, stage:Stage I, alive, 2816 days 2694.1
TCGA-SX-A71W-01A 66 years, male, white, stage:Stage I, alive, 1076 days 2677.0
TCGA-B3-3925-01A 52 years, male, white, stage:Stage III, alive, 1029 days 2669.0
TCGA-UZ-A9PL-01A 59 years, male, white, stage:Stage II, alive, 3152 days 2650.7
TCGA-PJ-A5Z9-01A 80 years, female, white, stage:Stage I, alive, 540 days 2647.5
TCGA-BQ-5887-01A 54 years, male, white, stage:Stage III, alive, 771 days 2645.8
TCGA-5P-A9KH-01A 77 years, male, white, stage:'--, alive, 2051 days 2630.7
TCGA-2Z-A9JG-01A 64 years, male, white, stage:Stage I, alive, 1662 days 2601.4
TCGA-UZ-A9PN-01A 54 years, male, white, stage:Stage III, dead, 1136 days 2596.2
TCGA-B1-A47M-01A 79 years, male, black or african american, stage:Stage III, alive, 659 days 2592.7
TCGA-Y8-A894-01A 57 years, female, white, stage:Stage I, alive, 567 days 2579.1
TCGA-KV-A6GD-01A 85 years, male, white, stage:Stage I, alive, 560 days 2533.6
TCGA-5P-A9K0-01A 75 years, male, white, stage:'--, alive, 677 days 2514.2
TCGA-B1-7332-01A 60 years, female, black or african american, stage:Stage II, alive, 1141 days 2500.2
TCGA-A4-7997-01A 67 years, male, white, stage:Stage I, alive, 927 days 2498.6
TCGA-GL-A59R-01A 79 years, male, white, stage:Stage III, alive, 378 days 2496.5
TCGA-DW-7838-01A 66 years, male, white, stage:Stage I, alive, 744 days 2486.5
TCGA-5P-A9JW-01A 64 years, male, white, stage:'--, alive, 3241 days 2482.3
TCGA-A4-7286-01A 42 years, male, white, stage:'--, alive, 554 days 2470.8
TCGA-BQ-7049-01A 45 years, female, white, stage:Stage I, dead, 1364 days 2469.3
TCGA-BQ-7053-01A 57 years, female, black or african american, stage:Stage III, alive, 1516 days 2444.4
TCGA-B9-A8YH-01A 52 years, male, black or african american, stage:Stage I, alive, 532 days 2427.1
TCGA-2Z-A9J5-01A 80 years, male, white, stage:Stage II, alive, 3050 days 2409.2
TCGA-B1-A47O-01A 54 years, female, white, stage:Stage I, alive, 842 days 2404.9
TCGA-2Z-A9JD-01A 66 years, male, white, stage:Stage I, alive, 1060 days 2383.5
TCGA-DZ-6135-01A 45 years, male, stage:Stage I, alive, 2269 days 2381.8
TCGA-AL-3472-01A 57 years, male, black or african american, stage:'--, alive, 2029 days 2381.2
TCGA-2Z-A9JM-01A 28 years, male, white, stage:Stage I, alive, 934 days 2367.0
TCGA-B9-4113-01A 64 years, male, black or african american, stage:Stage I, dead, 1536 days 2351.2
TCGA-F9-A7VF-01A 75 years, female, white, stage:Stage I, alive, 73 days 2348.9
TCGA-B9-4114-01A 49 years, male, black or african american, stage:'--, alive, 857 days 2345.9
TCGA-B9-A5W9-01A 40 years, male, white, stage:Stage I, alive, 5 days 2344.0
TCGA-2Z-A9JS-01A 74 years, male, white, stage:Stage I, dead, 492 days 2334.2
TCGA-GL-A9DC-01A 66 years, female, white, stage:Stage I, alive, 392 days 2322.4
TCGA-WN-A9G9-01A 55 years, male, white, stage:Stage I, alive, 791 days 2304.0
TCGA-MH-A55Z-01A 65 years, male, black or african american, stage:Stage I, alive, 845 days 2298.3
TCGA-IA-A83W-01A 70 years, male, white, stage:Stage I, dead, 2043 days 2286.5
TCGA-SX-A7SQ-01A 48 years, male, white, stage:Stage I, alive, 1266 days 2283.2
TCGA-BQ-5888-01A 74 years, female, white, stage:Stage I, alive, 403 days 2283.1
TCGA-SX-A7SU-01A 47 years, male, stage:Stage I, alive, 1331 days 2283.0
TCGA-B9-5156-01A 51 years, male, white, stage:'--, alive, 1338 days 2281.1
TCGA-B1-A657-01A 54 years, male, white, stage:Stage I, alive, 641 days 2256.4
TCGA-P4-A5E7-01A 74 years, female, white, stage:Stage I, alive, 2649 days 2254.8
TCGA-MH-A854-01A 62 years, female, black or african american, stage:Stage I, alive, 536 days 2253.0
TCGA-G7-6792-01A 40 years, male, black or african american, stage:Stage I, alive, 2765 days 2252.1
TCGA-A4-8516-01A 62 years, male, white, stage:Stage III, alive, 23 days 2250.9
TCGA-GL-A9DE-01A 74 years, male, black or african american, stage:Stage I, alive, 496 days 2244.9
TCGA-UZ-A9PX-01A 73 years, male, white, stage:Stage I, alive, 1981 days 2223.1
TCGA-A4-A5DU-01A 45 years, female, white, stage:Stage I, alive, 496 days 2223.0
TCGA-BQ-7044-01A 73 years, male, white, stage:Stage III, alive, 3760 days 2221.9
TCGA-HE-7129-01A male, stage:Stage II, alive, 2492 days 2207.5
TCGA-2Z-A9JT-01A 71 years, male, white, stage:Stage I, alive, 684 days 2205.0
TCGA-UZ-A9PK-01A 71 years, male, white, stage:Stage I, alive, 3571 days 2183.2
TCGA-MH-A562-01A 57 years, male, black or african american, stage:Stage I, alive, 616 days 2181.9
TCGA-UZ-A9PU-01A 77 years, male, white, stage:Stage I, dead, 933 days 2181.3
TCGA-A4-7288-01A 71 years, female, white, stage:'--, alive, 1857 days 2172.7
TCGA-5P-A9JZ-01A 51 years, female, white, stage:'--, alive, 2744 days 2166.7
TCGA-BQ-7062-01A 64 years, male, black or african american, stage:Stage I, alive, 116 days 2161.9
TCGA-HE-A5NJ-01A 58 years, male, stage:'--, alive, 1726 days 2156.3
TCGA-SX-A71U-01A 57 years, male, white, stage:Stage I, alive, 1357 days 2121.9
TCGA-2K-A9WE-01A 53 years, male, white, stage:Stage II, alive, 214 days 2118.7
TCGA-SX-A7SO-01A 64 years, male, white, stage:Stage I, alive, 1257 days 2115.5
TCGA-5P-A9JY-01A 79 years, male, white, stage:'--, dead, 1508 days 2114.9
TCGA-A4-7583-01A 60 years, male, black or african american, stage:Stage I, alive, 3 days 2094.7
TCGA-2Z-A9J6-01A 60 years, male, white, stage:Stage I, alive, 1731 days 2091.5
TCGA-DW-7837-01A 43 years, male, black or african american, stage:Stage I, alive, 1142 days 2082.4
TCGA-WN-AB4C-01A 60 years, female, white, stage:Stage I, alive, 1188 days 2062.9
TCGA-Y8-A897-01A 68 years, female, white, stage:Stage I, alive, 549 days 2018.8
TCGA-2Z-A9JP-01A 63 years, male, white, stage:Stage I, alive, 893 days 2011.2
TCGA-MH-A856-01A 54 years, male, white, stage:Stage I, alive, 947 days 1997.0
TCGA-BQ-7056-01A 75 years, female, white, stage:Stage III, alive, 612 days 1979.5
TCGA-DW-7840-01A 60 years, male, black or african american, stage:Stage I, alive, 114 days 1977.6
TCGA-2Z-A9J1-01A 71 years, male, white, stage:Stage I, alive, 2298 days 1974.5
TCGA-SX-A7SR-01A 66 years, male, white, stage:Stage II, alive, 805 days 1958.6
TCGA-IA-A40U-01A 56 years, male, white, stage:Stage III, alive, 511 days 1952.5
TCGA-B1-A47N-01A 62 years, male, white, stage:Stage I, alive, 1110 days 1951.8
TCGA-DW-5561-01A 51 years, male, black or african american, stage:Stage I, alive, 414 days 1949.4
TCGA-A4-A5XZ-01A 65 years, female, white, stage:Stage II, alive, 479 days 1943.0
TCGA-A4-7585-01A 67 years, male, white, stage:Stage III, dead, 1070 days 1928.3
TCGA-2Z-A9JN-01A 50 years, female, black or african american, stage:Stage I, alive, 740 days 1920.3
TCGA-UZ-A9PZ-01A 65 years, male, white, stage:Stage III, alive, 657 days 1908.4
TCGA-P4-AAVM-01A 69 years, male, white, stage:Stage I, alive, 1539 days 1894.6
TCGA-A4-8312-01A 60 years, male, black or african american, stage:Stage I, alive, 708 days 1891.3
TCGA-P4-A5E6-01A 67 years, male, black or african american, stage:Stage III, alive, 3035 days 1853.7
TCGA-A4-7732-01A 55 years, male, black or african american, stage:'--, alive, 582 days 1840.3
TCGA-5P-A9KC-01A 51 years, female, white, stage:'--, alive, 377 days 1807.7
TCGA-UZ-A9PS-01A 62 years, female, black or african american, stage:Stage II, alive, 2167 days 1782.4
TCGA-MH-A55W-01A 50 years, male, black or african american, stage:Stage I, alive, 1043 days 1771.4
TCGA-B9-A44B-01A 70 years, male, black or african american, stage:Stage III, alive, 361 days 1765.2
TCGA-BQ-5875-01A 66 years, female, white, stage:Stage III, alive, 2639 days 1758.5
TCGA-UZ-A9PO-01A 80 years, male, white, stage:Stage I, alive, 1911 days 1755.2
TCGA-IA-A83S-01A 81 years, male, white, stage:'--, dead, 2609 days 1750.2
TCGA-A4-8517-01A 71 years, male, white, stage:Stage I, alive, 597 days 1732.2
TCGA-5P-A9KF-01A 53 years, male, white, stage:'--, alive, 845 days 1730.2
TCGA-J7-A8I2-01A 75 years, male, asian, stage:Stage I, alive, 307 days 1721.3
TCGA-BQ-7046-01A 61 years, male, white, stage:Stage I, alive, 2948 days 1690.4
TCGA-Y8-A8RY-01A 63 years, male, white, stage:Stage I, alive, 769 days 1660.6
TCGA-B9-A8YI-01A 79 years, male, black or african american, stage:Stage I, alive, 374 days 1644.1
TCGA-BQ-5880-01A 79 years, male, white, stage:Stage III, dead, 1314 days 1621.0
TCGA-A4-A4ZT-01A 71 years, female, white, stage:Stage I, alive, 516 days 1613.9
TCGA-AT-A5NU-01A 77 years, male, white, stage:Stage I, alive, 67 days 1604.8
TCGA-GL-A9DD-01A 69 years, male, white, stage:Stage I, alive, 341 days 1576.6
TCGA-IZ-8195-01A 82 years, male, white, stage:Stage II, alive, 677 days 1509.6
TCGA-2Z-A9J3-01A 67 years, male, white, stage:Stage II, dead, 1771 days 1504.2
TCGA-A4-8630-01A 59 years, female, white, stage:Stage I, alive, 436 days 1483.8
TCGA-BQ-7060-01A 53 years, male, american indian or alaska native, stage:Stage I, alive, 214 days 1482.9
TCGA-AL-3468-01A 74 years, male, white, stage:Stage II, dead, 2331 days 1462.6
TCGA-B9-4617-01A 41 years, male, black or african american, stage:'--, alive, 35 days 1444.8
TCGA-Y8-A895-01A 74 years, male, white, stage:Stage I, alive, 484 days 1444.3
TCGA-SX-A71R-01A 51 years, male, white, stage:Stage I, alive, 1457 days 1431.6
TCGA-2Z-A9JO-01A 56 years, female, black or african american, stage:Stage I, alive, 949 days 1430.8
TCGA-GL-A59T-01A 46 years, male, white, stage:Stage I, alive, 546 days 1430.6
TCGA-HE-A5NF-01A 58 years, male, stage:Stage I, alive, 2582 days 1407.6
TCGA-BQ-5885-01A 63 years, male, white, stage:Stage III, alive, 921 days 1346.2
TCGA-A4-8518-01A 48 years, male, white, stage:Stage I, alive, 600 days 1269.9
TCGA-G7-A8LB-01A 70 years, male, white, stage:Stage IV, alive, 547 days 1258.8
TCGA-B3-4103-01A 56 years, male, white, stage:Stage I, alive, 930 days 1253.1
TCGA-BQ-5884-01A 59 years, female, black or african american, stage:Stage I, alive, 792 days 1242.9
TCGA-BQ-5886-01A 75 years, male, white, stage:Stage III, alive, 792 days 1171.2
TCGA-UZ-A9Q1-01A 88 years, female, white, stage:Stage I, alive, 730 days 1168.2
TCGA-HE-A5NL-01A 51 years, male, stage:Stage I, alive, 767 days 1165.3
TCGA-A4-8311-01A 60 years, male, white, stage:Stage I, alive, 729 days 1131.9
TCGA-BQ-7058-01A 81 years, male, white, stage:Stage III, dead, 343 days 1122.5
TCGA-G7-6795-01A 56 years, male, white, stage:Stage I, alive, 1194 days 948.2
TCGA-HE-A5NI-01A 73 years, male, stage:Stage I, alive, 360 days 876.3
TCGA-AL-3466-01A 41 years, male, white, stage:Stage IV, dead, 293 days 833.9
TCGA-G7-A8LC-01A 61 years, male, white, stage:Stage I, alive, 702 days 444.7
TCGA-UZ-A9PM-01A 62 years, male, white, stage:Stage II, alive, 3811 days 399.9
TCGA-A4-8515-01A 47 years, male, american indian or alaska native, stage:Stage I, alive, 709 days 380.8
TCGA-BQ-5890-01A 69 years, male, white, stage:Stage III, alive, 233 days 375.9
TCGA-AL-7173-01A 72 years, female, white, stage:Stage IV, alive, 2060 days 375.9
TCGA-DW-5560-01A 38 years, female, white, stage:Stage I, alive, 1486 days 353.4
TCGA-BQ-7050-01A 53 years, female, white, stage:Stage I, alive, 1864 days 332.5
TCGA-F9-A97G-01A 79 years, male, asian, stage:Stage III, alive, 13 days 326.7
TCGA-5P-A9K2-01A 62 years, male, white, stage:'--, alive, 2392 days 325.9
TCGA-F9-A7Q0-01A 37 years, female, asian, stage:Stage I, alive, 398 days 312.4
TCGA-A4-A57E-01A 59 years, male, white, stage:Stage IV, dead, 258 days 310.3
TCGA-Y8-A8RZ-01A 55 years, male, white, stage:Stage I, alive, 205 days 308.6
TCGA-KV-A6GE-01A 65 years, male, white, stage:Stage I, alive, 885 days 303.9
TCGA-2Z-A9JK-01A 50 years, male, white, stage:Stage III, alive, 1186 days 296.1
TCGA-KV-A74V-01A 40 years, male, white, stage:Stage I, alive, 347 days 296.0
TCGA-G7-6796-01A 58 years, male, white, stage:Stage I, alive, 2173 days 289.5
TCGA-GL-A4EM-01A 61 years, male, white, stage:Stage I, alive, 32 days 281.5
TCGA-G7-7501-01A 55 years, female, black or african american, stage:Stage III, dead, 624 days 281.2
TCGA-J7-8537-01A 37 years, female, asian, stage:Stage III, dead, 321 days 279.1
TCGA-O9-A75Z-01A 44 years, male, white, stage:Stage I, alive, 471 days 277.7
TCGA-Y8-A8S1-01A 61 years, male, white, stage:Stage I, alive, 404 days 274.3
TCGA-GL-6846-01A 52 years, male, white, stage:Stage IV, alive, 5925 days 270.7
TCGA-P4-AAVK-01A 74 years, male, white, stage:Stage III, alive, 1590 days 268.0
TCGA-A4-7734-01A 53 years, female, white, stage:Stage I, alive, 27 days 267.3
TCGA-MH-A855-01A 52 years, female, black or african american, stage:Stage II, alive, 369 days 266.4
TCGA-Y8-A896-01A 62 years, male, white, stage:Stage III, alive, 567 days 258.6
TCGA-BQ-5891-01A 57 years, female, white, stage:Stage III, alive, 29 days 244.9
TCGA-UZ-A9PV-01A 65 years, male, white, stage:Stage I, alive, 1444 days 241.4
TCGA-A4-A6HP-01A 66 years, male, white, stage:Stage I, alive, 379 days 233.8
TCGA-2Z-A9JI-01A 38 years, male, white, stage:Stage III, alive, 1567 days 225.9
TCGA-B1-A655-01A 77 years, female, white, stage:Stage I, alive, 510 days 225.0
TCGA-EV-5902-01A 58 years, male, white, stage:Stage I, alive, 578 days 220.4
TCGA-5P-A9KE-01A 70 years, male, white, stage:'--, alive, 824 days 204.5
TCGA-MH-A857-01A 63 years, male, black or african american, stage:Stage I, alive, 890 days 199.5
TCGA-UZ-A9PP-01A 60 years, male, white, stage:Stage I, alive, 3010 days 193.7
TCGA-A4-8310-01A 58 years, male, white, stage:Stage III, alive, 780 days 189.9
TCGA-A4-8098-01A 73 years, male, black or african american, stage:Stage I, alive, 896 days 188.1
TCGA-J7-6720-01A 42 years, male, asian, stage:Stage I, alive, 388 days 184.6
TCGA-G7-A8LD-01A 71 years, male, white, stage:Stage III, dead, 514 days 182.1
TCGA-SX-A7SS-01A 67 years, male, white, stage:Stage I, alive, 1615 days 180.1
TCGA-P4-AAVL-01A 85 years, male, white, stage:Stage III, dead, 487 days 177.8
TCGA-B9-A5W8-01A 50 years, male, black or african american, stage:Stage II, alive, 524 days 174.8
TCGA-A4-A5Y0-01A 61 years, female, white, stage:Stage I, alive, 252 days 174.6
TCGA-SX-A71V-01A 80 years, male, white, stage:Stage I, alive, 876 days 171.3
TCGA-BQ-7045-01A 78 years, male, black or african american, stage:Stage I, dead, 1468 days 169.9
TCGA-B9-5155-01A 71 years, male, white, stage:Stage III, alive, 665 days 167.0
TCGA-BQ-5881-01A 69 years, male, white, stage:Stage I, alive, 1454 days 160.7
TCGA-BQ-5876-01A 75 years, male, white, stage:Stage I, alive, 586 days 157.9
TCGA-DZ-6134-01A 69 years, male, white, stage:Stage I, alive, 1856 days 153.9
TCGA-MH-A560-01A 62 years, male, white, stage:Stage I, alive, 924 days 150.5
TCGA-V9-A7HT-01A 67 years, male, black or african american, stage:Stage II, alive, 965 days 147.8
TCGA-GL-8500-01A 63 years, male, white, stage:Stage I, alive, 841 days 144.9
TCGA-5P-A9JU-01A 81 years, male, white, stage:Stage III, alive, 373 days 138.1
TCGA-5P-A9K6-01A 64 years, male, white, stage:'--, alive, 1914 days 137.6
TCGA-DW-7834-01A 53 years, male, white, stage:Stage I, alive, 3950 days 124.4
TCGA-A4-A48D-01A 84 years, male, black or african american, stage:Stage I, alive, 379 days 122.0
TCGA-G7-A4TM-01A 40 years, male, black or african american, stage:Stage I, alive, 768 days 117.3
TCGA-IA-A40X-01A 49 years, female, black or african american, stage:Stage I, alive, 608 days 114.6
TCGA-BQ-5883-01A 79 years, female, black or african american, stage:Stage I, alive, 1242 days 112.3
TCGA-B9-A5W7-01A 47 years, male, black or african american, stage:Stage I, alive, 585 days 110.9
TCGA-UZ-A9Q0-01A 60 years, male, white, stage:Stage I, alive, 3368 days 106.7
TCGA-DZ-6133-01A 66 years, female, white, stage:Stage I, dead, 1557 days 98.9
TCGA-BQ-7055-01A 73 years, male, white, stage:Stage I, alive, 799 days 87.4
TCGA-SX-A7SL-01A 74 years, male, stage:Stage I, alive, 823 days 79.4
TCGA-5P-A9K8-01A 51 years, female, white, stage:'--, alive, 1309 days 66.3
TCGA-A4-7584-01A 59 years, male, black or african american, stage:Stage I, alive, 650 days 64.3
TCGA-AL-3471-01A 74 years, male, white, stage:Stage I, dead, 1500 days 45.6
TCGA-B3-A6W5-01A 43 years, male, black or african american, stage:Stage I, alive, 309 days 39.7
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RENAL CELL CARCINOMA - Protein relative expression (CPTAC)
Number of samples 194
Samples
Sample ID Sample type nRPX
CPT0001340003 Tumor 0.9
CPT0088550004 Tumor 0.8
CPT0001180009 Tumor 0.7
CPT0084560003 Tumor 0.6
CPT0012180003 Tumor 0.6
CPT0075130003 Tumor 0.6
CPT0002350011 Tumor 0.5
CPT0023350003 Tumor 0.5
CPT0012550003 Tumor 0.5
CPT0086950003 Tumor 0.5
CPT0009000003 Tumor 0.5
CPT0017850003 Tumor 0.4
CPT0079410003 Tumor 0.4
CPT0088690003 Tumor 0.4
CPT0088970003 Tumor 0.4
CPT0077110003 Tumor 0.4
CPT0001260009 Tumor 0.4
CPT0026410003 Tumor 0.4
CPT0011410003 Tumor 0.4
CPT0025880003 Tumor 0.3
CPT0014450004 Tumor 0.3
CPT0002270011 Tumor 0.3
CPT0065430003 Tumor 0.3
CPT0012670003 Tumor 0.3
CPT0081600003 Tumor 0.3
CPT0025110003 Tumor 0.3
CPT0077320001 Normal 0.3
CPT0012370003 Tumor 0.3
CPT0086820003 Tumor 0.3
CPT0069160003 Tumor 0.3
CPT0069000003 Tumor 0.2
CPT0001270001 Normal 0.2
CPT0001540009 Tumor 0.2
CPT0010160003 Tumor 0.2
CPT0079230003 Tumor 0.2
CPT0075170001 Normal 0.2
CPT0076350001 Normal 0.2
CPT0088480003 Tumor 0.2
CPT0077490003 Tumor 0.2
CPT0084590001 Normal 0.2
CPT0088630003 Tumor 0.2
CPT0010110003 Tumor 0.2
CPT0025230003 Tumor 0.2
CPT0025050003 Tumor 0.2
CPT0012080003 Tumor 0.2
CPT0001190001 Normal 0.2
CPT0078830003 Tumor 0.2
CPT0071150004 Tumor 0.2
CPT0078840001 Normal 0.2
CPT0092800003 Normal 0.2
CPT0088920001 Normal 0.1
CPT0092730003 Tumor 0.1
CPT0088780001 Normal 0.1
CPT0078990003 Tumor 0.1
CPT0075720003 Tumor 0.1
CPT0024670003 Tumor 0.1
CPT0089480003 Normal 0.1
CPT0092190003 Normal 0.1
CPT0082010001 Normal 0.1
CPT0076330003 Tumor 0.1
CPT0010120001 Normal 0.1
CPT0012090003 Normal 0.1
CPT0086970003 Normal 0.1
CPT0079480003 Tumor 0.1
CPT0092740003 Normal 0.1
CPT0014370004 Tumor 0.1
CPT0086870003 Tumor 0.1
CPT0000890001 Normal 0.1
CPT0000640003 Tumor 0.1
CPT0012570003 Normal 0.1
CPT0085670003 Tumor 0.1
CPT0006440003 Tumor 0.1
CPT0001220008 Tumor 0.1
CPT0021240003 Tumor 0.1
CPT0063630003 Tumor 0.0
CPT0078800003 Tumor 0.0
CPT0066470004 Tumor 0.0
CPT0020020001 Normal 0.0
CPT0078530001 Normal 0.0
CPT0079270003 Tumor 0.0
CPT0014130001 Normal 0.0
CPT0088900003 Tumor 0.0
CPT0001350001 Normal 0.0
CPT0087050003 Normal 0.0
CPT0013790003 Normal 0.0
CPT0065930003 Tumor 0.0
CPT0081990003 Tumor 0.0
CPT0092310003 Normal 0.0
CPT0019130003 Tumor 0.0
CPT0065870003 Tumor 0.0
CPT0012770003 Normal 0.0
CPT0089040001 Normal 0.0
CPT0088570001 Normal 0.0
CPT0092160003 Tumor 0.0
CPT0015810003 Tumor 0.0
CPT0000780007 Tumor 0.0
CPT0089460004 Tumor 0.0
CPT0077500001 Normal 0.0
CPT0089020003 Tumor 0.0
CPT0007470001 Normal 0.0
CPT0088760003 Tumor 0.0
CPT0012280003 Tumor 0.0
CPT0075570001 Normal 0.0
CPT0086370003 Normal 0.0
CPT0025580004 Tumor 0.0
CPT0006730001 Normal 0.0
CPT0077140001 Normal 0.0
CPT0069010001 Normal 0.0
CPT0086830003 Normal 0.0
CPT0014470001 Normal 0.0
CPT0088710001 Normal 0.0
CPT0010170001 Normal 0.0
CPT0023360001 Normal 0.0
CPT0086890003 Normal 0.0
CPT0063640001 Normal -0.1
CPT0081880003 Tumor -0.1
CPT0026420001 Normal -0.1
CPT0024680001 Normal -0.1
CPT0017410003 Tumor -0.1
CPT0092290003 Tumor -0.1
CPT0025350003 Tumor -0.1
CPT0017450001 Normal -0.1
CPT0011240003 Tumor -0.1
CPT0065450001 Normal -0.1
CPT0066520001 Normal -0.1
CPT0006630003 Tumor -0.1
CPT0012290003 Normal -0.1
CPT0019990003 Tumor -0.1
CPT0087040003 Tumor -0.1
CPT0001500009 Tumor -0.1
CPT0020130001 Normal -0.1
CPT0007320003 Tumor -0.1
CPT0000790001 Normal -0.1
CPT0018250001 Normal -0.1
CPT0025060001 Normal -0.1
CPT0081620001 Normal -0.1
CPT0065820001 Normal -0.1
CPT0079000001 Normal -0.1
CPT0002370001 Normal -0.1
CPT0000870016 Tumor -0.1
CPT0006950001 Normal -0.1
CPT0066480003 Tumor -0.1
CPT0078670001 Normal -0.1
CPT0014160003 Tumor -0.1
CPT0014350001 Normal -0.1
CPT0066430001 Normal -0.1
CPT0006530001 Normal -0.1
CPT0063330001 Normal -0.1
CPT0078940001 Normal -0.1
CPT0012920003 Normal -0.1
CPT0019160001 Normal -0.1
CPT0063320003 Tumor -0.2
CPT0006900003 Tumor -0.2
CPT0069190001 Normal -0.2
CPT0079380003 Tumor -0.2
CPT0000660001 Normal -0.2
CPT0025610001 Normal -0.2
CPT0001510001 Normal -0.2
CPT0001550001 Normal -0.2
CPT0088500001 Normal -0.2
CPT0079430001 Normal -0.2
CPT0023690003 Tumor -0.2
CPT0064370003 Tumor -0.2
CPT0007870001 Normal -0.2
CPT0079300001 Normal -0.2
CPT0015730003 Tumor -0.2
CPT0012900004 Tumor -0.2
CPT0009020003 Normal -0.2
CPT0079510001 Normal -0.2
CPT0088640003 Normal -0.2
CPT0077310003 Tumor -0.2
CPT0023710001 Normal -0.2
CPT0064400001 Normal -0.2
CPT0025920001 Normal -0.2
CPT0092790003 Tumor -0.3
CPT0065750003 Tumor -0.3
CPT0086030003 Tumor -0.3
CPT0009060003 Tumor -0.3
CPT0015910003 Tumor -0.3
CPT0025170003 Tumor -0.3
CPT0078510003 Tumor -0.3
CPT0086360003 Tumor -0.3
CPT0020120003 Tumor -0.3
CPT0078660003 Tumor -0.3
CPT0009080003 Normal -0.3
CPT0078930003 Tumor -0.3
CPT0007860003 Tumor -0.3
CPT0065810003 Tumor -0.4
CPT0065690003 Tumor -0.4
CPT0075560003 Tumor -0.4
CPT0025290003 Tumor -0.4
CPT0012640003 Normal -0.4
CPT0079180003 Tumor -0.5
CPT0001230001 Normal -0.6
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RENAL CANCER - Protein expressioni

A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.

Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.

 

Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.


Antibody HPA011311

Antibody CAB010339
 Staining
  High
  Medium
  Low
  Not detected
 Intensity
  Strong
  Moderate
  Weak
  Negative
 Quantity
  >75%
  75%-25%
  <25%
  None
 Location
  Nuclear
  Cytoplasmic/membranous
  Cytoplasmic/membranous,nuclear
  None
Adenocarcinoma, NOS

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The Human Protein Atlas project is funded
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