HIPPOCAMPAL FORMATION - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:161.3 nTPM
HPA Brain:137.3 nTPM
GTEx:161.3 nTPM
FANTOM5:429.7 Scaled Tags Per Million
Pig:2.4 nTPM
Mouse:0.1 nTPM
Allen mouse:0.0 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 137.3
Sample id Sample description nTPM
Hippocampus
nTPM: 137.3
1898 Male, age 80, left hemisphere 159.2
1855 Male, age 76, left hemisphere 156.5
1911 Female, age 85, right hemisphere 147.8
2529 Female, age 94, left hemisphere 132.4
2148 Female, age 91, left hemisphere 126.1
2621 Female, age 67, right hemisphere 101.6
Dentate gyrus
nTPM: 120.7
2010 Male, age 76, both hemispheres 166.3
2530 Female, age 94, left hemisphere 145.3
2528 Male, age 74, both hemispheres 131.9
2246 Female, age 85, both hemispheres 116.3
1927 Female, age 91, both hemispheres 92.0
2531 Female, age 67, both hemispheres 72.3
Entorhinal gyrus
nTPM: 100.5
2117 Female, age 91, right hemisphere 171.4
1938 Female, age 85, left hemisphere 122.5
1787 Male, age 76, left hemisphere 105.0
2686 Male, age 75, right hemisphere 100.7
2613 Female, age 94, left hemisphere 52.3
2764 Male, age 80, right hemisphere 51.2
Hippocampus, CA1
nTPM: 104.1
1873 Female, age 85, both hemispheres 133.5
2527 Male, age 74, both hemispheres 120.5
2045 Male, age 76, both hemispheres 109.3
2082 Female, age 91, right hemisphere 86.9
2749 Male, age 80, left hemisphere 70.1
Hippocampus, CA2
nTPM: 112.9
2249 Male, age 74, both hemispheres 155.7
1940 Female, age 85, left hemisphere 124.2
2437 Female, age 94, left hemisphere 110.7
2113 Female, age 91, right hemisphere 104.3
1892 Male, age 76, both hemispheres 96.7
1963 Male, age 80, left hemisphere 85.7
Hippocampus, CA3
nTPM: 94.7
1891 Female, age 85, both hemispheres 131.1
1867 Male, age 76, both hemispheres 120.4
2436 Male, age 74, both hemispheres 98.8
2137 Male, age 80, left hemisphere 83.5
2861 Female, age 67, both hemispheres 72.9
2620 Female, age 94, left hemisphere 61.5
Parahippocampal cortex
nTPM: 101.5
2250 Female, age 67, right hemisphere 136.5
2018 Male, age 76, both hemispheres 133.3
1933 Female, age 85, both hemispheres 115.4
2692 Male, age 74, both hemispheres 113.1
2245 Female, age 91, both hemispheres 103.0
1850 Male, age 80, both hemispheres 88.9
2532 Female, age 72, left hemisphere 84.3
1990 Female, age 91, right hemisphere 83.5
2693 Female, age 94, both hemispheres 81.1
2622 Female, age 67, right hemisphere 76.1
Perirhinal gyrus
nTPM: 80.1
1841 Female, age 85, right hemisphere 93.4
2521 Female, age 94, right hemisphere 86.3
1794 Male, age 80, right hemisphere 74.2
1847 Female, age 91, left hemisphere 74.1
2848 Male, age 76, right hemisphere 72.7
Subiculum
nTPM: 122.0
2042 Male, age 76, both hemispheres 155.6
2729 Female, age 91, right hemisphere 150.8
2438 Female, age 94, left hemisphere 137.9
1901 Male, age 80, both hemispheres 110.6
2619 Male, age 74, both hemispheres 88.9
1977 Female, age 85, both hemispheres 88.2

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 161.3
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 161.3
Samples: 197

Max nTPM: 445.0
Min nTPM: 44.7
Std nTPM: 65.5
Median nTPM: 146.8
GTEX-1A32A-0011-R1a-SM-7P8SQ 50-59 years, female 445.0
GTEX-11ZTS-0011-R1a-SM-5BC71 60-69 years, female 429.3
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 415.1
GTEX-13OW5-0011-R1b-SM-5L3GE 60-69 years, male 336.5
GTEX-PWO3-0011-R1A-SM-2I5EW 60-69 years, female 302.0
GTEX-1HR98-0011-R1a-SM-ARZLQ 60-69 years, male 298.4
GTEX-11TUW-0011-R1a-SM-DO92S 60-69 years, male 295.1
GTEX-11ZVC-0011-R1b-SM-5BC6M 50-59 years, female 286.2
GTEX-13NYS-0011-R1b-SM-5MR55 60-69 years, male 277.2
GTEX-1GF9V-0011-R1a-SM-CKZNQ 60-69 years, male 268.6
GTEX-17JCI-0011-R1b-SM-718A3 60-69 years, female 268.4
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 429.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 429.7
FF:10153-102I9 76 years, female 475.2
FF:10169-103B7 60 years, female 384.2

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 2.4
Pig sample Sample description nTPM
Subiculum
nTPM: 1.9
Samples: 4

Max nTPM: 3.8
Min nTPM: 1.0
Sample A Female 1.0
Sample B Female 1.3
Sample C Male 1.5
Sample D Male 3.8
Dorsal hippocampus
nTPM: 2.4
Samples: 4

Max nTPM: 3.9
Min nTPM: 1.6
Sample A Female 3.9
Sample B Female 2.1
Sample C Male 1.9
Sample D Male 1.6
Entorhinal cortex
nTPM: 1.0
Samples: 4

Max nTPM: 1.3
Min nTPM: 0.8
Sample A Female 1.2
Sample B Female 0.8
Sample C Male 0.8
Sample D Male 1.3
Ventral hippocampus
nTPM: 2.4
Samples: 4

Max nTPM: 4.0
Min nTPM: 0.5
Sample A Female 4.0
Sample B Female 0.5
Sample C Male 1.5
Sample D Male 3.4

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 0.1
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 0.1
Samples: 4

Max nTPM: 0.2
Min nTPM: 0.0
Sample A Male 0.0
Sample B Male 0.0
Sample C Female 0.1
Sample D Female 0.2
Hippocampal formation
nTPM: 0.1
Samples: 4

Max nTPM: 0.1
Min nTPM: 0.0
Sample A Male 0.1
Sample B Male 0.0
Sample C Female 0.1
Sample D Female 0.0

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 0.0
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.0
70785780 Antisense, RP_050706_02_E09, Mouse strain C57BL/6J (56 days, male) 0.0

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