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BRAIN BASAL GANGLIA Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS MEDULLA OBLONGATA
MIDBRAIN OLFACTORY BULB PITUITARY GLAND PONS RETINA SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
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VALIDATION
Brain proteome
Basal ganglia
BASAL GANGLIA - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:199.2 nTPM
HPA Brain:386.0 nTPM
GTEx:199.2 nTPM
FANTOM5:643.4 Scaled Tags Per Million
Pig:213.6 nTPM
Mouse:313.4 nTPM
Allen mouse:14.4 Expression energy

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA074873Antibody CAB010346
Glial cells MediumNot detected
Neuronal cells Not detectedMedium





BASAL GANGLIA - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

386.0
Sample id Sample description nTPM
Caudate nucleus
nTPM: 332.5
2481 Female, age 94, left hemisphere 558.7
2288 Male, age 75, left hemisphere 369.5
2290 Female, age 72, unknown 350.6
2289 Male, age 61, right hemisphere 326.1
1857 Female, age 85, left hemisphere 321.9
1854 Male, age 80, left hemisphere 271.4
2846 Female, age 79, unknown 238.0
1781 Male, age 74, unknown 224.1
Globus pallidus, externus
nTPM: 342.0
2646 Male, age 61, right hemisphere 515.4
1996 Male, age 80, right hemisphere 460.9
2772 Female, age 79, unknown 293.2
2395 Male, age 75, both hemispheres 240.2
2567 Female, age 72, unknown 200.5
Globus pallidus, internus
nTPM: 310.6
2483 Female, age 94, right hemisphere 471.5
2037 Male, age 80, right hemisphere 398.7
1818 Male, age 74, unknown 363.1
2287 Male, age 75, right hemisphere 300.3
2778 Female, age 91, both hemispheres 273.7
2111 Female, age 85, right hemisphere 187.1
2566 Female, age 72, unknown 179.8
Nucleus accumbens
nTPM: 304.6
2286 Male, age 75, left hemisphere 405.9
2391 Female, age 94, left hemisphere 318.8
1856 Female, age 91, right hemisphere 317.4
2824 Male, age 61, right hemisphere 315.5
1806 Female, age 85, left hemisphere 291.4
2732 Male, age 80, right hemisphere 283.2
2698 Female, age 72, unknown 280.5
1783 Male, age 74, unknown 224.0
Nucleus basalis of Meynert
nTPM: 346.2
2569 Male, age 61, both hemispheres 616.3
2484 Female, age 94, left hemisphere 290.9
2393 Male, age 80, right hemisphere 283.8
2821 Male, age 75, both hemispheres 193.6
Nucleus of the diagonal band
nTPM: 379.2
1812 Female, age 91, both hemispheres 434.1
1979 Male, age 74, unknown 420.8
2775 Male, age 80, right hemisphere 392.1
2195 Female, age 85, both hemispheres 357.8
2029 Male, age 61, right hemisphere 290.9
Putamen
nTPM: 294.6
2482 Female, age 94, left hemisphere 400.2
2489 Female, age 72, unknown 307.6
1829 Male, age 74, unknown 297.1
2647 Male, age 75, left hemisphere 275.3
1937 Female, age 91, right hemisphere 268.9
1838 Male, age 80, right hemisphere 268.0
2466 Female, age 79, unknown 245.2
Septal nuclei
nTPM: 386.0
2059 Female, age 85, both hemispheres 466.9
2199 Male, age 80, right hemisphere 440.7
2009 Female, age 91, both hemispheres 389.2
1960 Male, age 74, unknown 384.9
2629 Female, age 94, right hemisphere 379.1
2031 Female, age 72, unknown 343.0
2394 Male, age 61, left hemisphere 298.2
Stria terminalis, bed nucleus
nTPM: 314.1
2201 Male, age 74, unknown 355.4
1974 Female, age 91, both hemispheres 307.0
2486 Female, age 94, both hemispheres 279.8

BASAL GANGLIA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

199.2
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 199.2
Samples: 246

Max nTPM: 414.4
Min nTPM: 18.8
Std nTPM: 70.4
Median nTPM: 192.7
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 414.4
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 396.6
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 372.5
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 367.2
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 362.8
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 360.5
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 360.3
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 351.4
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 348.6
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 347.0
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 344.3
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 339.5
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 327.5
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 319.8
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 318.1
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 315.4
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 307.6
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 305.9
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 305.0
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 304.4
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 303.8
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 302.7
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 291.9
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 291.6
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 290.7
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 290.4
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 284.9
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 284.6
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 280.0
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 278.6
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 274.4
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 271.1
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 269.4
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 268.4
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 268.3
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 266.6
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 266.4
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 265.6
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 263.7
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 263.3
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 261.2
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 260.9
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 259.6
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 259.5
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 258.3
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 258.2
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 258.1
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 258.0
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 257.4
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 255.7
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 255.6
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 254.8
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 254.3
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 252.4
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 250.7
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 250.2
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 249.8
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 249.2
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 248.8
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 247.7
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 247.2
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 246.9
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 246.6
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 245.6
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 245.0
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 244.9
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 244.5
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 244.0
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 242.1
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 239.7
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 238.3
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 237.1
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 236.7
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 234.6
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 234.5
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 233.8
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 233.8
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 233.5
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 233.3
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 231.8
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 231.1
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 230.1
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 229.8
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 229.7
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 229.2
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 228.2
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 225.9
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 225.9
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 224.9
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 222.7
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 222.4
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 219.7
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 217.9
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 216.6
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 215.8
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 214.8
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 214.7
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 214.2
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 213.9
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 213.4
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 211.4
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 209.6
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 207.2
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 206.6
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 206.2
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 204.0
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 203.5
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 203.5
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 202.5
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 201.0
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 200.8
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 200.4
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 200.1
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 200.0
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 199.8
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 199.7
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 198.0
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 197.6
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 196.8
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 194.9
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 193.9
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 193.8
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 193.6
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 191.8
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 191.7
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 191.5
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 190.4
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 189.4
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 189.2
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 186.2
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 185.5
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 184.7
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 184.3
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 183.8
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 183.1
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 183.1
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 183.0
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 182.2
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 181.9
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 181.8
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 180.8
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 180.1
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 178.4
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 177.8
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 177.5
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 175.2
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 175.2
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 174.9
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 173.6
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 173.4
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 172.8
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 172.6
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 172.0
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 170.8
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 168.9
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 168.6
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 168.6
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 167.6
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 166.4
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 166.1
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 165.9
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 165.8
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 165.7
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 165.5
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 165.0
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 163.7
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 162.6
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 162.4
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 162.2
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 161.9
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 161.6
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 161.3
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 160.9
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 160.7
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 160.6
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 160.5
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 159.7
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 159.6
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 156.7
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 156.5
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 156.2
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 154.5
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 152.0
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 150.9
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 150.5
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 149.8
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 147.9
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 147.5
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 144.0
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 143.0
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 142.9
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 142.8
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 142.6
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 142.0
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 141.4
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 140.6
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 139.8
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 139.4
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 139.2
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 138.6
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 137.8
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 137.5
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 135.8
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 132.9
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 132.8
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 131.5
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 130.8
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 129.6
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 128.6
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 127.4
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 127.0
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 126.7
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 126.6
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 124.4
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 124.0
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 123.2
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 122.7
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 120.2
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 119.7
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 119.0
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 118.0
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 115.5
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 113.8
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 113.0
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 112.5
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 111.7
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 110.5
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 108.5
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 107.8
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 105.1
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 102.7
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 99.5
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 94.5
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 94.0
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 93.6
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 87.7
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 84.4
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 78.7
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 74.3
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 72.3
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 67.8
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 62.2
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 52.9
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 41.1
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 33.8
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 18.8
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Brain - Nucleus accumbens (basal ganglia)
Average nTPM: 171.4
Samples: 246

Max nTPM: 369.4
Min nTPM: 28.6
Std nTPM: 67.9
Median nTPM: 165.2
GTEX-139TT-0011-R6b-SM-5J2ON 60-69 years, male 369.4
GTEX-131XW-0011-R6b-SM-5K7XY 50-59 years, female 365.0
GTEX-13OVJ-0011-R6b-SM-5L3GH 50-59 years, female 359.7
GTEX-1A8G6-0011-R6b-SM-7P8PE 60-69 years, male 342.8
GTEX-13OW8-0011-R6b-SM-5L3I3 60-69 years, male 330.0
GTEX-1GZ2Q-0011-R6a-SM-9OSWM 40-49 years, male 329.8
GTEX-11GSP-0011-R6b-SM-57WBQ 60-69 years, female 328.4
GTEX-145MI-0011-R6a-SM-5PNZA 60-69 years, female 323.2
GTEX-15EO6-0011-R6a-SM-7KULK 50-59 years, male 322.0
GTEX-1445S-0011-R6b-SM-5PNUF 60-69 years, male 319.1
GTEX-13JVG-0011-R6a-SM-5MR3E 60-69 years, male 318.6
GTEX-1IKOH-0011-R6b-SM-A9G1W 60-69 years, female 311.5
GTEX-1EH9U-0011-R6a-SM-CJI2C 60-69 years, male 306.0
GTEX-14753-0011-R6b-SM-5S2UD 60-69 years, male 298.8
GTEX-13PL6-0011-R6a-SM-5O9C5 40-49 years, female 291.6
GTEX-PWO3-0011-R6A-SM-2I5F3 60-69 years, female 289.9
GTEX-11ONC-0011-R6a-SM-DO12A 60-69 years, male 283.9
GTEX-145MH-0011-R6a-SM-5PNZ7 50-59 years, male 279.7
GTEX-QDT8-0011-R6A-SM-32PKI 30-39 years, female 274.6
GTEX-1EKGG-0011-R6a-SM-CL538 60-69 years, male 274.6
GTEX-WVLH-0011-R6A-SM-3MJFZ 50-59 years, male 273.5
GTEX-147F4-0011-R6b-SM-5S2UP 50-59 years, male 271.3
GTEX-1F75B-0011-R6a-SM-ARZMI 50-59 years, male 270.5
GTEX-R55E-0011-R6A-SM-2TC5T 20-29 years, male 269.0
GTEX-ZVZQ-0011-R6b-SM-57WAY 60-69 years, female 267.5
GTEX-1GN2E-0011-R6b-SM-9QEII 60-69 years, male 267.5
GTEX-T2IS-0011-R6A-SM-32QP2 20-29 years, female 264.1
GTEX-ZV68-0011-R6a-SM-51MSR 50-59 years, female 262.2
GTEX-1CB4J-0011-R6b-SM-9WG7B 60-69 years, male 262.2
GTEX-1I1GQ-0011-R6b-SM-CE6SE 50-59 years, male 257.5
GTEX-1LB8K-0011-R6a-SM-EXURT 50-59 years, male 257.1
GTEX-17HG3-0011-R6b-SM-79OK8 30-39 years, female 251.6
GTEX-TSE9-0011-R6A-SM-3DB7L 60-69 years, female 250.0
GTEX-1GF9V-0011-R6b-SM-CJI2Q 60-69 years, male 246.2
GTEX-1192X-0011-R6a-SM-DNZZB 50-59 years, male 245.0
GTEX-RU72-0011-R6A-SM-2TF71 50-59 years, female 240.1
GTEX-1MJK2-0011-R6a-SM-EXUS3 50-59 years, male 238.5
GTEX-17JCI-0011-R6a-SM-72D6D 60-69 years, female 238.0
GTEX-1JJEA-0011-R6a-SM-EXUS1 60-69 years, male 236.8
GTEX-QVUS-0011-R6A-SM-3GACX 60-69 years, female 235.3
GTEX-13NYB-0011-R6b-SM-5MR51 40-49 years, male 232.4
GTEX-11WQC-0011-R6a-SM-5BC77 60-69 years, male 231.7
GTEX-13QJC-0011-R6a-SM-5S2VI 60-69 years, female 230.6
GTEX-1R46S-0011-R6a-SM-EZ6N6 60-69 years, female 229.7
GTEX-Q2AG-0011-R6A-SM-2HML7 40-49 years, female 227.6
GTEX-14PHW-0011-R6b-SM-5YYAR 60-69 years, female 226.8
GTEX-131XH-0011-R6a-SM-5KM2G 50-59 years, male 226.5
GTEX-S7PM-0011-R6A-SM-3NM8F 60-69 years, male 226.3
GTEX-1CB4H-0011-R6b-SM-CKZNK 60-69 years, female 225.1
GTEX-139TS-0011-R6a-SM-5J2OB 60-69 years, male 224.1
GTEX-1LVA9-0011-R6a-SM-EYYWH 50-59 years, male 223.7
GTEX-ZVT3-0011-R6a-SM-51MSU 60-69 years, female 222.1
GTEX-1C64N-0011-R6a-SM-7IGO9 50-59 years, male 220.6
GTEX-1GTWX-0011-R6a-SM-A96RN 60-69 years, male 219.4
GTEX-1EMGI-0011-R6a-SM-9OSVR 60-69 years, male 218.9
GTEX-13OW5-0011-R6b-SM-5O9BW 60-69 years, male 217.9
GTEX-1HGF4-0011-R6a-SM-A96S1 60-69 years, male 216.1
GTEX-13O3O-0011-R6b-SM-5P9GY 60-69 years, female 215.9
GTEX-11NUK-0011-R6a-SM-DO93O 50-59 years, male 215.6
GTEX-15DCD-0011-R6b-SM-6M46L 70-79 years, female 213.8
GTEX-12ZZY-0011-R6b-SM-5EGLA 60-69 years, male 212.9
GTEX-12584-0011-R6a-SM-5NQ7C 40-49 years, male 212.2
GTEX-1F6I4-0011-R6a-SM-CE6R4 60-69 years, male 211.1
GTEX-12ZZW-0011-R6a-SM-5DUVZ 50-59 years, male 209.6
GTEX-14LZ3-0011-R6a-SM-D3L8C 60-69 years, female 208.9
GTEX-1E1VI-0011-R6a-SM-9OSVJ 50-59 years, male 207.6
GTEX-14ABY-0011-R6a-SM-5PNWR 50-59 years, male 207.5
GTEX-15ER7-0011-R6a-SM-6M46M 20-29 years, female 207.2
GTEX-1I1GR-0011-R6a-SM-CMKHI 60-69 years, male 206.7
GTEX-13G51-0011-R6b-SM-5LZX4 60-69 years, male 206.5
GTEX-13RTJ-0011-R6a-SM-5SI74 60-69 years, male 206.2
GTEX-1JMLX-0011-R6b-SM-EXUT9 50-59 years, male 206.0
GTEX-1H23P-0011-R6b-SM-A9G1H 60-69 years, male 205.8
GTEX-15CHQ-0011-R6b-SM-69LOX 60-69 years, male 205.5
GTEX-13X6K-0011-R6a-SM-5P9K6 60-69 years, female 204.4
GTEX-X261-0011-R6B-SM-4E3J8 50-59 years, male 203.2
GTEX-XMD1-0011-R6A-SM-4AT5K 60-69 years, male 199.2
GTEX-1HBPH-0011-R6a-SM-CKZOV 40-49 years, female 199.0
GTEX-N7MT-0011-R6a-SM-2I3G3 60-69 years, female 198.5
GTEX-144GO-0011-R6b-SM-5S2V7 60-69 years, male 197.6
GTEX-WHSE-0011-R6A-SM-3P5ZP 20-29 years, male 197.3
GTEX-ZDXO-0011-R6a-SM-4WWCT 60-69 years, male 197.2
GTEX-1I19N-0011-R6b-SM-CY8GC 70-79 years, male 195.9
GTEX-11O72-0011-R6a-SM-DNZZQ 40-49 years, male 193.9
GTEX-1H1DG-0011-R6a-SM-A9SK8 70-79 years, male 190.9
GTEX-13SLX-0011-R6a-SM-5PNX4 50-59 years, female 190.6
GTEX-1EN7A-0011-R6b-SM-9QEHW 40-49 years, male 188.7
GTEX-1B8SF-0011-R6b-SM-7MXUD 60-69 years, male 188.5
GTEX-1N2DW-0011-R6a-SM-EZ6MW 50-59 years, male 187.3
GTEX-17HHY-0011-R6b-SM-7189Z 50-59 years, male 187.1
GTEX-14BIM-0011-R6b-SM-5S2VB 60-69 years, female 186.2
GTEX-13OW6-0011-R6b-SM-5L3GR 50-59 years, male 186.0
GTEX-P44H-0011-R6A-SM-2XCF3 40-49 years, male 184.1
GTEX-11NV4-0011-R6a-SM-57WD5 60-69 years, male 183.0
GTEX-14C5O-0011-R6a-SM-5YYB6 60-69 years, male 182.8
GTEX-1GMR8-0011-R6b-SM-CE6RC 50-59 years, female 182.0
GTEX-1RLM8-0011-R6a-SM-EYYXS 50-59 years, male 181.8
GTEX-18465-0011-R6a-SM-7LG6M 50-59 years, male 181.3
GTEX-13X6J-0011-R6a-SM-5PNUB 50-59 years, male 181.2
GTEX-13FLW-0011-R6b-SM-5L3EN 50-59 years, male 180.7
GTEX-Y8DK-0011-R6A-SM-4V6EG 60-69 years, male 180.2
GTEX-14JG1-0011-R6b-SM-5YYAU 40-49 years, male 179.7
GTEX-1HBPI-0011-R6b-SM-A9G1T 50-59 years, male 179.7
GTEX-1H4P4-0011-R6a-SM-ARZLR 50-59 years, male 178.3
GTEX-11TTK-0011-R6b-SM-DNZZW 60-69 years, female 178.1
GTEX-1IL2U-0011-R6a-SM-ARZLG 60-69 years, male 177.9
GTEX-1J8Q2-0011-R6a-SM-CKZPG 60-69 years, male 177.7
GTEX-13112-0011-R6b-SM-5DUVK 50-59 years, male 177.4
GTEX-1GZ4I-0011-R6b-SM-9WG77 50-59 years, male 176.4
GTEX-T6MN-0011-R6A-SM-32QP8 50-59 years, male 175.1
GTEX-1I1GV-0011-R6b-SM-ARU6Q 60-69 years, male 175.1
GTEX-ZE9C-0011-R6a-SM-4WWCW 60-69 years, male 174.3
GTEX-15DYW-0011-R6b-SM-6PALA 60-69 years, female 173.6
GTEX-ZE7O-0011-R6a-SM-57WCI 50-59 years, female 171.7
GTEX-1EX96-0011-R6a-SM-9OSVV 50-59 years, male 171.6
GTEX-ZXG5-0011-R6a-SM-57WBZ 60-69 years, male 170.7
GTEX-1C6VR-0011-R6a-SM-7MXU8 60-69 years, male 170.7
GTEX-X4XX-0011-R6B-SM-46MWP 60-69 years, male 169.7
GTEX-13O3Q-0011-R6a-SM-5KM2V 50-59 years, male 169.1
GTEX-17EVP-0011-R6b-SM-7LT99 40-49 years, male 168.8
GTEX-13OVL-0011-R6a-SM-5L3G4 50-59 years, male 167.8
GTEX-12WSM-0011-R6b-SM-5EQ6N 60-69 years, male 167.6
GTEX-1I1HK-0011-R6b-SM-CM2T9 60-69 years, male 165.6
GTEX-13OVH-0011-R6b-SM-5LUAX 70-79 years, male 164.7
GTEX-1H3O1-0011-R6b-SM-CL54U 60-69 years, male 159.8
GTEX-13JUV-0011-R6b-SM-5LZYG 40-49 years, female 158.9
GTEX-145LS-0011-R6b-SM-5PNWL 60-69 years, female 158.9
GTEX-1H1CY-0011-R6b-SM-CE6RP 60-69 years, female 158.7
GTEX-16Z82-0011-R6a-SM-7IGLV 60-69 years, male 158.5
GTEX-S7SE-0011-R6A-SM-2XCD9 50-59 years, male 158.2
GTEX-1HT8W-0011-R6a-SM-CM2SY 30-39 years, male 158.0
GTEX-1IKK5-0011-R6b-SM-A9SLY 60-69 years, male 157.5
GTEX-1F6IF-0011-R6a-SM-9QEIO 60-69 years, male 157.0
GTEX-13FLV-0011-R6a-SM-5KLZ4 50-59 years, male 156.4
GTEX-NPJ7-0011-R6a-SM-2I3G7 60-69 years, female 153.5
GTEX-1A3MX-0011-R6a-SM-7P8S9 60-69 years, male 153.2
GTEX-WZTO-0011-R6B-SM-4E3J6 40-49 years, male 152.8
GTEX-1B996-0011-R6b-SM-793AQ 60-69 years, male 152.4
GTEX-P44G-0011-R6A-SM-2XCD3 30-39 years, male 151.5
GTEX-11OF3-0011-R6b-SM-57WBG 60-69 years, male 151.2
GTEX-144GL-0011-R6a-SM-5P9HW 50-59 years, male 149.7
GTEX-132Q8-0011-R6a-SM-5K7YN 60-69 years, male 148.9
GTEX-14E7W-0011-R6b-SM-5ZZV3 70-79 years, male 148.5
GTEX-16YQH-0011-R6b-SM-7938T 30-39 years, male 148.4
GTEX-QVJO-0011-R6A-SM-2S1QN 60-69 years, female 148.2
GTEX-1IDJH-0011-R6a-SM-A9SLZ 70-79 years, male 145.6
GTEX-1OJC4-0011-R6a-SM-EXOIM 50-59 years, female 145.4
GTEX-12ZZZ-0011-R6b-SM-5EQ5B 60-69 years, male 145.3
GTEX-NL3H-0011-R6a-SM-2I3G8 60-69 years, male 144.9
GTEX-13NYS-0011-R6b-SM-5MR3R 60-69 years, male 144.1
GTEX-1HB9E-0011-R6b-SM-A9G1P 50-59 years, male 144.1
GTEX-NPJ8-0011-R6a-SM-2HMKB 40-49 years, male 144.0
GTEX-1CB4G-0011-R6b-SM-9QEGO 60-69 years, male 144.0
GTEX-13N1W-0011-R6a-SM-5MR43 70-79 years, male 143.2
GTEX-NL4W-0011-R6a-SM-2I3GA 50-59 years, male 141.5
GTEX-14JIY-0011-R6b-SM-68714 60-69 years, male 141.4
GTEX-1GN73-0011-R6b-SM-CJI2T 60-69 years, male 139.4
GTEX-1B933-0011-R6b-SM-79OOQ 50-59 years, female 139.0
GTEX-WWYW-0011-R6A-SM-3NB3G 50-59 years, female 139.0
GTEX-13FXS-0011-R6b-SM-5L3F7 50-59 years, male 137.8
GTEX-1MA7X-0011-R6a-SM-EYYWR 60-69 years, male 137.8
GTEX-145LU-0011-R6a-SM-5S2V6 50-59 years, male 137.3
GTEX-T5JC-0011-R6A-SM-D3L87 20-29 years, male 137.3
GTEX-1IY9M-0011-R6a-SM-D4P28 60-69 years, male 136.6
GTEX-QMR6-0011-R6A-SM-32PKP 50-59 years, male 136.1
GTEX-11DXY-0011-R6a-SM-DNZZF 60-69 years, male 136.1
GTEX-1H3NZ-0011-R6b-SM-A9G1N 60-69 years, male 135.6
GTEX-183WM-0011-R6b-SM-72D66 70-79 years, female 135.3
GTEX-13VXU-0011-R6a-SM-5SI71 50-59 years, male 134.6
GTEX-1LH75-0011-R6a-SM-EXURS 50-59 years, female 133.8
GTEX-13SLW-0011-R6a-SM-5O9BH 70-79 years, male 133.1
GTEX-1AX9I-0011-R6a-SM-7P8PK 60-69 years, male 132.4
GTEX-UTHO-0011-R6A-SM-3GIJW 60-69 years, male 132.3
GTEX-14PN4-0011-R6b-SM-69LQU 50-59 years, male 132.2
GTEX-1F88E-0011-R6a-SM-CKZNW 60-69 years, female 129.3
GTEX-1HUB1-0011-R6b-SM-ARU6W 60-69 years, male 128.9
GTEX-1GF9W-0011-R6b-SM-9QEIE 60-69 years, male 128.2
GTEX-14BMV-0011-R6b-SM-5YY9I 50-59 years, male 126.8
GTEX-12WSH-0011-R6b-SM-5P9F4 50-59 years, male 125.1
GTEX-147GR-0011-R6b-SM-5S2RO 60-69 years, male 124.8
GTEX-17F97-0011-R6a-SM-7EPGS 50-59 years, male 124.5
GTEX-XLM4-0011-R6A-SM-4AT4B 60-69 years, male 124.4
GTEX-YJ89-0011-R6a-SM-4V6GN 60-69 years, male 124.0
GTEX-14ASI-0011-R6a-SM-5S2UZ 60-69 years, male 123.9
GTEX-12ZZX-0011-R6a-SM-5HL8L 40-49 years, female 123.6
GTEX-12WSE-0011-R6b-SM-5LZV5 20-29 years, male 118.9
GTEX-18A6Q-0011-R6a-SM-7LG6R 60-69 years, male 118.8
GTEX-14PJM-0011-R6a-SM-6872G 50-59 years, female 118.5
GTEX-1IGQW-0011-R6a-SM-CM2TC 60-69 years, male 118.4
GTEX-15RJE-0011-R6a-SM-7DHL8 40-49 years, male 117.4
GTEX-1F48J-0011-R6a-SM-CJI2F 50-59 years, female 116.2
GTEX-OHPN-0011-R6A-SM-2I5FH 60-69 years, female 115.9
GTEX-1GMRU-0011-R6b-SM-A9G3B 50-59 years, male 114.7
GTEX-1GZHY-0011-R6a-SM-9OSWL 50-59 years, female 114.2
GTEX-11DZ1-0011-R6b-SM-DNZZG 50-59 years, male 113.9
GTEX-11PRG-0011-R6b-SM-DO923 50-59 years, male 113.1
GTEX-ZAB4-0011-R6a-SM-4SOKD 40-49 years, male 112.9
GTEX-1GN1U-0011-R6a-SM-CKZNO 50-59 years, female 112.7
GTEX-1EWIQ-0011-R6a-SM-ARU8G 70-79 years, female 111.2
GTEX-1HR9M-0011-R6a-SM-ARU6Z 60-69 years, male 111.0
GTEX-1I1CD-0011-R6b-SM-CJI3Y 60-69 years, female 111.0
GTEX-N7MS-0011-R6a-SM-2HMJ4 60-69 years, male 107.7
GTEX-13FHP-0011-R6b-SM-5LZY6 50-59 years, male 104.9
GTEX-ZF28-0011-R6a-SM-4WKHI 60-69 years, male 104.9
GTEX-13IVO-0011-R6b-SM-5K7X9 70-79 years, male 104.8
GTEX-14BIN-0011-R6a-SM-5S2RH 50-59 years, female 104.8
GTEX-1F7RK-0011-R6b-SM-ARZMG 20-29 years, female 103.3
GTEX-1BAJH-0011-R6b-SM-7MXT2 70-79 years, male 103.1
GTEX-1HBPM-0011-R6b-SM-ARU73 60-69 years, female 102.2
GTEX-Z93S-0011-R6b-SM-4RGNJ 50-59 years, male 101.9
GTEX-1313W-0011-R6a-SM-5K7XO 50-59 years, female 101.1
GTEX-18464-0011-R6a-SM-731CA 50-59 years, male 99.4
GTEX-1H3VE-0011-R6b-SM-A9G1M 40-49 years, male 99.2
GTEX-12WSC-0011-R6b-SM-5LU99 50-59 years, male 98.7
GTEX-1B8L1-0011-R6b-SM-7P8SU 60-69 years, male 98.3
GTEX-WL46-0011-R6A-SM-3LK6X 50-59 years, male 96.3
GTEX-1E2YA-0011-R6b-SM-CE6R2 50-59 years, male 96.1
GTEX-17MF6-0011-R6b-SM-7LG6G 40-49 years, male 96.0
GTEX-1399T-0011-R6b-SM-5K7YL 60-69 years, male 95.8
GTEX-1LVAO-0011-R6b-SM-EZ6MX 60-69 years, male 94.1
GTEX-13N2G-0011-R6b-SM-5MR3P 60-69 years, male 92.8
GTEX-15G19-0011-R6b-SM-7KUM3 60-69 years, male 91.0
GTEX-1C6WA-0011-R6a-SM-7PBYP 60-69 years, male 88.5
GTEX-1F75W-0011-R6a-SM-9QEI5 60-69 years, male 87.7
GTEX-12WSF-0011-R6b-SM-5HL8W 70-79 years, male 87.2
GTEX-16XZZ-0011-R6a-SM-7IGNE 60-69 years, male 87.0
GTEX-11DXW-0011-R6a-SM-DO11N 40-49 years, male 85.3
GTEX-13S7M-0011-R6b-SM-5O9D8 60-69 years, female 84.5
GTEX-YFC4-0011-R6b-SM-4V6E1 40-49 years, female 84.1
GTEX-1H1ZS-0011-R6b-SM-A9G1F 70-79 years, male 82.7
GTEX-1F75A-0011-R6b-SM-9QEHD 50-59 years, male 81.8
GTEX-14PQA-0011-R6b-SM-6AJAM 50-59 years, female 81.0
GTEX-1I1GS-0011-R6b-SM-CMKHE 60-69 years, male 72.6
GTEX-12WSD-0011-R6b-SM-5P9JU 60-69 years, female 72.0
GTEX-X4EP-0011-R6A-SM-3P629 60-69 years, female 71.7
GTEX-1ICLZ-0011-R6b-SM-A9G3A 60-69 years, male 70.2
GTEX-13PDP-0011-R6b-SM-5O9D5 60-69 years, male 69.1
GTEX-1LC47-0011-R6b-SM-EZ6MI 60-69 years, male 68.5
GTEX-11DYG-0011-R6a-SM-DO936 60-69 years, male 67.5
GTEX-1HFI6-0011-R6b-SM-CM2SR 40-49 years, male 67.0
GTEX-17EVQ-0011-R6a-SM-7189U 70-79 years, male 65.1
GTEX-1J1OQ-0011-R6a-SM-ARU86 40-49 years, female 51.5
GTEX-ZUA1-0011-R6b-SM-4YCDD 40-49 years, male 44.1
GTEX-13FHO-0011-R6b-SM-5LZX1 60-69 years, male 38.7
GTEX-X4XY-0011-R6B-SM-46MVB 60-69 years, male 38.4
GTEX-X585-0011-R6A-SM-46MVJ 50-59 years, male 28.6
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Brain - Putamen (basal ganglia)
Average nTPM: 188.7
Samples: 205

Max nTPM: 408.6
Min nTPM: 32.7
Std nTPM: 78.7
Median nTPM: 184.5
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 408.6
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 402.3
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 375.1
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 373.9
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 355.1
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 346.4
GTEX-RU72-0011-R7A-SM-2TF5U 50-59 years, female 339.8
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 335.5
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 333.2
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 324.3
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 322.8
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 318.2
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 316.5
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 313.1
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 308.6
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 308.5
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 304.7
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 303.0
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 301.2
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 291.5
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 290.1
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 287.1
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 286.8
GTEX-1IOXB-0011-R7b-SM-CE6SM 50-59 years, male 285.0
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 282.9
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 282.8
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 282.3
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 280.8
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 280.8
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 280.6
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 276.1
GTEX-NL3H-0011-R7a-SM-2I3G5 60-69 years, male 274.3
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 273.1
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 271.5
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 271.0
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 268.1
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 259.2
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 255.9
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 255.7
GTEX-P44G-0011-R7A-SM-2I3F9 30-39 years, male 255.1
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 255.1
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 252.6
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 251.9
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 251.8
GTEX-R55E-0011-R7A-SM-2TC5Z 20-29 years, male 250.3
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 250.1
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 246.2
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 246.1
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 242.5
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 241.3
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 240.0
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 239.1
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 239.1
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 238.3
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 237.5
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 235.9
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 234.9
GTEX-TSE9-0011-R7A-SM-3DB7P 60-69 years, female 233.8
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 233.7
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 233.2
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 232.6
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 232.2
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 231.7
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 230.8
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 230.6
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 229.7
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 229.2
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 225.6
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 225.6
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 224.7
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 224.5
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 222.4
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 220.3
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 219.8
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 219.4
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 218.3
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 218.1
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 217.5
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 217.4
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 217.2
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 216.3
GTEX-NPJ8-0011-R7a-SM-2HMJV 40-49 years, male 214.4
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 213.7
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 209.2
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 208.2
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 207.0
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 206.8
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 200.0
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 199.2
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 197.1
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 196.8
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 196.5
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 196.4
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 193.8
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 192.8
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 192.8
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 189.7
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 189.3
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 189.1
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 188.1
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 186.8
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 186.7
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 184.5
GTEX-QVJO-0011-R7A-SM-2S1QO 60-69 years, female 183.9
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 183.7
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 183.0
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 182.6
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 182.3
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 181.6
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 177.4
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 177.3
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 176.9
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 175.6
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 172.3
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 172.1
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 170.6
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 170.3
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 168.5
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 167.9
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 164.1
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 159.2
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 158.9
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 158.5
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 158.1
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 157.4
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 156.4
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 154.4
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 153.7
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 153.1
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 153.1
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 152.7
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 152.5
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 150.3
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 147.1
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 146.6
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 145.2
GTEX-S7SE-0011-R7A-SM-2XCDI 50-59 years, male 144.1
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 143.1
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 143.0
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 140.5
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 139.8
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 139.6
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 139.4
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 138.7
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 134.8
GTEX-18464-0011-R7b-SM-731CM 50-59 years, male 132.8
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 132.7
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 132.6
GTEX-N7MS-0011-R7a-SM-2HMKN 60-69 years, male 132.4
GTEX-1J1OQ-0011-R7b-SM-ARU87 40-49 years, female 131.8
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 131.7
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 131.4
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 131.1
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 128.6
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 127.9
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 126.6
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 124.6
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 124.3
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 124.2
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 122.8
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 121.0
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 119.4
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 118.8
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 117.5
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 116.7
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 116.4
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 115.3
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 114.3
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 111.6
GTEX-OHPN-0011-R7A-SM-2I5FI 60-69 years, female 110.9
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 110.5
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 109.5
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 108.3
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 107.3
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 107.1
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 106.9
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 106.0
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 104.9
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 101.2
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 100.6
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 100.6
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 97.8
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 97.2
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 97.1
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 96.4
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 95.4
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 91.5
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 88.6
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 88.5
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 80.8
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 75.4
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 72.9
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 72.3
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 70.3
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 65.7
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 58.2
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 55.9
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 51.6
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 48.5
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 44.3
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 43.2
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 39.6
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 37.8
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 37.0
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 32.7
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BASAL GANGLIA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

643.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 554.4
FF:10164-103B2 76 years, female 554.4
Nucleus accumbens
Scaled Tags Per Million: 643.4
FF:10037-101F1 23-56 years, mixed 643.4
Putamen
Scaled Tags Per Million: 637.3
FF:10176-103C5 60 years, female 637.3
Globus pallidus
Scaled Tags Per Million: 522.6
FF:10175-103C4 60 years, female 548.5
FF:10161-103A8 76 years, female 496.6

BASAL GANGLIA - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

213.6
Pig sample Sample description nTPM
Caudate
nTPM: 184.9
Samples: 4

Max nTPM: 203.3
Min nTPM: 158.9
Sample A Female 158.9
Sample B Female 203.3
Sample C Male 200.5
Sample D Male 176.7
Putamen
nTPM: 167.6
Samples: 4

Max nTPM: 179.0
Min nTPM: 150.0
Sample A Female 166.0
Sample B Female 175.5
Sample C Male 179.0
Sample D Male 150.0
Septum
nTPM: 213.6
Samples: 4

Max nTPM: 253.4
Min nTPM: 161.1
Sample A Female 161.1
Sample B Female 211.3
Sample C Male 253.4
Sample D Male 228.5
Ventral pallidum
nTPM: 183.0
Samples: 4

Max nTPM: 243.2
Min nTPM: 148.8
Sample A Female 149.4
Sample B Female 190.7
Sample C Male 243.2
Sample D Male 148.8

BASAL GANGLIA - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

313.4
Mouse sample Sample description nTPM
Caudate putamen
nTPM: 217.5
Samples: 4

Max nTPM: 253.6
Min nTPM: 195.2
Sample A Male 203.1
Sample B Male 195.2
Sample C Female 218.1
Sample D Female 253.6
Septum
nTPM: 313.4
Samples: 4

Max nTPM: 334.6
Min nTPM: 271.7
Sample A Male 271.7
Sample B Male 334.6
Sample C Female 329.5
Sample D Female 317.7
Ventral forebrain
nTPM: 214.9
Samples: 4

Max nTPM: 227.8
Min nTPM: 189.6
Sample A Male 189.6
Sample B Male 219.9
Sample C Female 222.2
Sample D Female 227.8

BASAL GANGLIA - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

14.4
Allen experiment id Experiment description Expression energy
Striatum
Expression energy: 14.4
79360318 Antisense, RP_071018_02_A09, Mouse strain C57BL/6J (56 days, male) 17.8
747 Antisense, RP_Baylor_253946, Mouse strain C57BL/6J (56 days, male) 11.1
746 Antisense, RP_Baylor_253946, Mouse strain C57BL/6J (56 days, male) 4.6
Pallidum
Expression energy: 12.4
79360318 Antisense, RP_071018_02_A09, Mouse strain C57BL/6J (56 days, male) 15.3
747 Antisense, RP_Baylor_253946, Mouse strain C57BL/6J (56 days, male) 9.6
746 Antisense, RP_Baylor_253946, Mouse strain C57BL/6J (56 days, male) 4.0

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