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BRAIN BASAL GANGLIA Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS MEDULLA OBLONGATA
MIDBRAIN OLFACTORY BULB PITUITARY GLAND PONS RETINA SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
AND
VALIDATION
Brain proteome
Basal ganglia
BASAL GANGLIA - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glial cells: Not detected
Neuronal cells: Low
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:152.6 nTPM
HPA Brain:129.0 nTPM
GTEx:152.6 nTPM
FANTOM5:256.6 Scaled Tags Per Million
Pig:17.7 nTPM
Mouse:13.8 nTPM
Allen mouse:3.3 Expression energy

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA010961Antibody HPA011419
Glial cells Not detectedNot detected
Neuronal cells Not detectedLow





BASAL GANGLIA - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

129.0
Sample id Sample description nTPM
Caudate nucleus
nTPM: 128.8
2481 Female, age 94, left hemisphere 192.1
1857 Female, age 85, left hemisphere 157.6
2290 Female, age 72, unknown 143.0
1854 Male, age 80, left hemisphere 130.1
2289 Male, age 61, right hemisphere 119.6
2846 Female, age 79, unknown 106.0
1781 Male, age 74, unknown 99.8
2288 Male, age 75, left hemisphere 82.0
Globus pallidus, externus
nTPM: 120.1
2646 Male, age 61, right hemisphere 180.7
1996 Male, age 80, right hemisphere 153.7
2772 Female, age 79, unknown 97.7
2395 Male, age 75, both hemispheres 95.6
2567 Female, age 72, unknown 72.6
Globus pallidus, internus
nTPM: 113.4
2483 Female, age 94, right hemisphere 176.4
2037 Male, age 80, right hemisphere 152.4
1818 Male, age 74, unknown 119.2
2287 Male, age 75, right hemisphere 103.6
2778 Female, age 91, both hemispheres 92.5
2111 Female, age 85, right hemisphere 80.1
2566 Female, age 72, unknown 69.8
Nucleus accumbens
nTPM: 106.1
1806 Female, age 85, left hemisphere 138.4
2391 Female, age 94, left hemisphere 114.3
1856 Female, age 91, right hemisphere 112.4
2698 Female, age 72, unknown 111.1
1783 Male, age 74, unknown 98.0
2286 Male, age 75, left hemisphere 95.1
2824 Male, age 61, right hemisphere 91.1
2732 Male, age 80, right hemisphere 88.3
Nucleus basalis of Meynert
nTPM: 129.0
2569 Male, age 61, both hemispheres 195.4
2484 Female, age 94, left hemisphere 121.5
2393 Male, age 80, right hemisphere 118.9
2821 Male, age 75, both hemispheres 80.3
Nucleus of the diagonal band
nTPM: 75.4
1812 Female, age 91, both hemispheres 90.4
1979 Male, age 74, unknown 83.1
2195 Female, age 85, both hemispheres 79.2
2775 Male, age 80, right hemisphere 72.3
2029 Male, age 61, right hemisphere 51.8
Putamen
nTPM: 101.6
2482 Female, age 94, left hemisphere 145.4
2489 Female, age 72, unknown 118.3
1937 Female, age 91, right hemisphere 107.0
1838 Male, age 80, right hemisphere 98.2
1829 Male, age 74, unknown 90.7
2466 Female, age 79, unknown 90.1
2647 Male, age 75, left hemisphere 61.7
Septal nuclei
nTPM: 89.4
2394 Male, age 61, left hemisphere 115.0
2199 Male, age 80, right hemisphere 106.2
2059 Female, age 85, both hemispheres 97.0
1960 Male, age 74, unknown 80.8
2009 Female, age 91, both hemispheres 78.5
2031 Female, age 72, unknown 76.7
2629 Female, age 94, right hemisphere 71.9
Stria terminalis, bed nucleus
nTPM: 79.2
2201 Male, age 74, unknown 95.2
2486 Female, age 94, both hemispheres 75.1
1974 Female, age 91, both hemispheres 67.4

BASAL GANGLIA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

152.6
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 152.6
Samples: 246

Max nTPM: 556.2
Min nTPM: 25.0
Std nTPM: 73.8
Median nTPM: 132.0
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 556.2
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 418.4
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 399.6
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 376.8
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 356.7
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 350.4
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 333.6
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 322.5
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 306.1
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 295.1
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 289.2
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 285.7
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 284.9
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 284.7
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 284.0
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 282.2
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 275.3
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 274.1
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 262.5
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 258.9
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 257.4
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 257.1
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 256.0
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 252.5
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 250.7
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 250.5
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 249.7
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 249.3
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 247.8
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 236.1
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 234.7
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 232.4
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 229.4
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 224.7
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 224.2
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 221.9
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 220.5
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 219.7
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 214.7
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 213.9
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 212.8
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 212.0
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 210.5
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 209.8
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 209.1
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 208.8
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 203.9
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 203.7
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 202.6
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 201.9
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 200.9
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 198.8
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 198.6
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 198.2
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 198.1
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 197.0
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 195.7
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 195.5
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 194.9
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 193.1
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 192.1
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 192.1
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 190.1
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 189.0
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 188.2
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 187.9
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 187.0
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 187.0
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 186.5
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 185.0
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 181.7
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 180.8
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 177.7
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 176.6
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 175.3
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 174.2
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 173.8
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 173.8
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 172.6
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 172.0
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 171.3
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 169.6
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 168.5
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 167.4
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 166.9
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 165.8
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 165.4
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 164.4
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 163.3
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 162.6
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 161.6
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 161.1
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 159.8
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 158.5
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 157.7
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 156.9
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 155.5
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 155.0
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 154.0
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 153.9
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 152.4
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 149.7
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 148.4
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 146.2
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 146.1
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 144.9
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 143.5
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 141.7
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 141.6
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 141.5
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 141.3
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 141.0
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 140.1
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 139.3
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 138.8
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 138.2
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 137.7
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 136.3
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 135.0
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 134.8
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 134.4
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 134.0
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 132.1
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 131.9
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 131.7
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 131.7
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 131.5
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 130.6
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 130.0
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 129.7
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 129.6
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 129.5
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 128.9
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 128.0
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 128.0
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 127.6
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 127.4
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 126.8
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 125.8
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 125.4
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 125.1
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 124.9
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 124.9
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 124.6
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 123.5
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 121.9
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 121.8
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 121.4
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 121.2
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 120.9
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 120.2
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 119.3
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 118.7
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 118.3
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 117.8
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 117.6
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 116.8
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 116.8
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 116.6
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 116.2
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 115.7
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 115.7
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 115.5
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 115.3
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 115.3
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 113.3
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 113.2
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 111.9
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 111.7
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 111.2
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 110.8
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 109.4
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 108.7
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 108.2
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 107.9
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 107.2
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 106.8
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 106.3
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 106.0
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 103.9
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 103.4
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 103.3
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 103.2
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 102.9
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 102.8
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 101.3
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 101.2
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 100.1
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 100.1
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 99.0
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 99.0
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 99.0
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 97.5
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 97.4
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 96.3
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 95.4
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 95.3
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 94.6
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 93.6
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 92.6
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 91.5
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 90.1
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 89.1
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 88.8
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 87.5
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 86.7
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 86.1
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 85.3
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 84.8
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 84.7
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 83.3
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 83.1
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 83.0
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 82.6
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 81.9
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 81.9
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 81.0
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 79.8
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 79.1
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 78.7
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 76.9
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 76.7
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 76.7
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 76.7
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 76.5
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 75.9
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 74.5
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 74.1
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 73.7
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 71.3
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 69.5
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 68.3
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 66.7
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 65.9
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 65.4
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 63.8
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 62.6
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 61.5
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 61.2
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 58.5
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 57.3
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 56.5
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 44.4
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 35.8
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 25.1
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 25.0
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Brain - Nucleus accumbens (basal ganglia)
Average nTPM: 148.1
Samples: 246

Max nTPM: 871.9
Min nTPM: 30.5
Std nTPM: 93.5
Median nTPM: 117.4
GTEX-14753-0011-R6b-SM-5S2UD 60-69 years, male 871.9
GTEX-1CB4H-0011-R6b-SM-CKZNK 60-69 years, female 470.3
GTEX-16XZZ-0011-R6a-SM-7IGNE 60-69 years, male 441.1
GTEX-1F75B-0011-R6a-SM-ARZMI 50-59 years, male 378.4
GTEX-14PHW-0011-R6b-SM-5YYAR 60-69 years, female 371.6
GTEX-1RLM8-0011-R6a-SM-EYYXS 50-59 years, male 369.8
GTEX-1E2YA-0011-R6b-SM-CE6R2 50-59 years, male 369.0
GTEX-12584-0011-R6a-SM-5NQ7C 40-49 years, male 365.9
GTEX-1R46S-0011-R6a-SM-EZ6N6 60-69 years, female 355.5
GTEX-1EH9U-0011-R6a-SM-CJI2C 60-69 years, male 345.0
GTEX-131XW-0011-R6b-SM-5K7XY 50-59 years, female 338.1
GTEX-1445S-0011-R6b-SM-5PNUF 60-69 years, male 336.1
GTEX-X261-0011-R6B-SM-4E3J8 50-59 years, male 332.3
GTEX-145MI-0011-R6a-SM-5PNZA 60-69 years, female 329.7
GTEX-1CB4J-0011-R6b-SM-9WG7B 60-69 years, male 328.8
GTEX-13OVJ-0011-R6b-SM-5L3GH 50-59 years, female 321.1
GTEX-ZV68-0011-R6a-SM-51MSR 50-59 years, female 320.0
GTEX-X4XY-0011-R6B-SM-46MVB 60-69 years, male 317.5
GTEX-ZVT3-0011-R6a-SM-51MSU 60-69 years, female 315.1
GTEX-1HBPM-0011-R6b-SM-ARU73 60-69 years, female 295.7
GTEX-13JVG-0011-R6a-SM-5MR3E 60-69 years, male 295.5
GTEX-1H3VE-0011-R6b-SM-A9G1M 40-49 years, male 292.3
GTEX-1H23P-0011-R6b-SM-A9G1H 60-69 years, male 288.8
GTEX-1C64N-0011-R6a-SM-7IGO9 50-59 years, male 287.1
GTEX-13PDP-0011-R6b-SM-5O9D5 60-69 years, male 280.5
GTEX-13PL6-0011-R6a-SM-5O9C5 40-49 years, female 278.4
GTEX-1A8G6-0011-R6b-SM-7P8PE 60-69 years, male 276.2
GTEX-13OW5-0011-R6b-SM-5O9BW 60-69 years, male 275.4
GTEX-1LB8K-0011-R6a-SM-EXURT 50-59 years, male 268.3
GTEX-139TS-0011-R6a-SM-5J2OB 60-69 years, male 253.8
GTEX-12ZZW-0011-R6a-SM-5DUVZ 50-59 years, male 251.9
GTEX-1EN7A-0011-R6b-SM-9QEHW 40-49 years, male 251.8
GTEX-1LC47-0011-R6b-SM-EZ6MI 60-69 years, male 247.2
GTEX-1192X-0011-R6a-SM-DNZZB 50-59 years, male 242.4
GTEX-X4EP-0011-R6A-SM-3P629 60-69 years, female 239.6
GTEX-1GN2E-0011-R6b-SM-9QEII 60-69 years, male 231.5
GTEX-13OW8-0011-R6b-SM-5L3I3 60-69 years, male 229.7
GTEX-PWO3-0011-R6A-SM-2I5F3 60-69 years, female 220.0
GTEX-13NYS-0011-R6b-SM-5MR3R 60-69 years, male 218.1
GTEX-11O72-0011-R6a-SM-DNZZQ 40-49 years, male 216.5
GTEX-1IKOH-0011-R6b-SM-A9G1W 60-69 years, female 215.0
GTEX-S7PM-0011-R6A-SM-3NM8F 60-69 years, male 214.0
GTEX-139TT-0011-R6b-SM-5J2ON 60-69 years, male 213.7
GTEX-QVUS-0011-R6A-SM-3GACX 60-69 years, female 210.7
GTEX-1H4P4-0011-R6a-SM-ARZLR 50-59 years, male 210.2
GTEX-144GO-0011-R6b-SM-5S2V7 60-69 years, male 209.6
GTEX-1GZ2Q-0011-R6a-SM-9OSWM 40-49 years, male 209.5
GTEX-147F4-0011-R6b-SM-5S2UP 50-59 years, male 206.0
GTEX-NPJ8-0011-R6a-SM-2HMKB 40-49 years, male 203.4
GTEX-XMD1-0011-R6A-SM-4AT5K 60-69 years, male 202.9
GTEX-13QJC-0011-R6a-SM-5S2VI 60-69 years, female 202.4
GTEX-13JUV-0011-R6b-SM-5LZYG 40-49 years, female 193.3
GTEX-1EWIQ-0011-R6a-SM-ARU8G 70-79 years, female 192.3
GTEX-13IVO-0011-R6b-SM-5K7X9 70-79 years, male 190.0
GTEX-15EO6-0011-R6a-SM-7KULK 50-59 years, male 189.2
GTEX-16Z82-0011-R6a-SM-7IGLV 60-69 years, male 185.4
GTEX-11GSP-0011-R6b-SM-57WBQ 60-69 years, female 184.5
GTEX-TSE9-0011-R6A-SM-3DB7L 60-69 years, female 182.2
GTEX-13SLW-0011-R6a-SM-5O9BH 70-79 years, male 182.0
GTEX-1JJEA-0011-R6a-SM-EXUS1 60-69 years, male 181.8
GTEX-1I19N-0011-R6b-SM-CY8GC 70-79 years, male 180.2
GTEX-145LU-0011-R6a-SM-5S2V6 50-59 years, male 178.5
GTEX-11TTK-0011-R6b-SM-DNZZW 60-69 years, female 177.4
GTEX-1F88E-0011-R6a-SM-CKZNW 60-69 years, female 176.8
GTEX-1E1VI-0011-R6a-SM-9OSVJ 50-59 years, male 173.1
GTEX-145MH-0011-R6a-SM-5PNZ7 50-59 years, male 171.0
GTEX-1EKGG-0011-R6a-SM-CL538 60-69 years, male 170.3
GTEX-1LVA9-0011-R6a-SM-EYYWH 50-59 years, male 163.6
GTEX-14LZ3-0011-R6a-SM-D3L8C 60-69 years, female 161.9
GTEX-1H1DG-0011-R6a-SM-A9SK8 70-79 years, male 157.9
GTEX-ZF28-0011-R6a-SM-4WKHI 60-69 years, male 156.9
GTEX-1GF9W-0011-R6b-SM-9QEIE 60-69 years, male 155.5
GTEX-1GTWX-0011-R6a-SM-A96RN 60-69 years, male 151.5
GTEX-14BIM-0011-R6b-SM-5S2VB 60-69 years, female 150.6
GTEX-QVJO-0011-R6A-SM-2S1QN 60-69 years, female 149.8
GTEX-N7MT-0011-R6a-SM-2I3G3 60-69 years, female 149.6
GTEX-1IL2U-0011-R6a-SM-ARZLG 60-69 years, male 148.3
GTEX-11DZ1-0011-R6b-SM-DNZZG 50-59 years, male 147.8
GTEX-11ONC-0011-R6a-SM-DO12A 60-69 years, male 147.5
GTEX-17JCI-0011-R6a-SM-72D6D 60-69 years, female 147.1
GTEX-14C5O-0011-R6a-SM-5YYB6 60-69 years, male 146.5
GTEX-13SLX-0011-R6a-SM-5PNX4 50-59 years, female 146.4
GTEX-13NYB-0011-R6b-SM-5MR51 40-49 years, male 144.0
GTEX-1GMR8-0011-R6b-SM-CE6RC 50-59 years, female 142.7
GTEX-1HB9E-0011-R6b-SM-A9G1P 50-59 years, male 142.3
GTEX-11WQC-0011-R6a-SM-5BC77 60-69 years, male 140.7
GTEX-1EMGI-0011-R6a-SM-9OSVR 60-69 years, male 140.4
GTEX-1GZ4I-0011-R6b-SM-9WG77 50-59 years, male 139.5
GTEX-WWYW-0011-R6A-SM-3NB3G 50-59 years, female 139.3
GTEX-1F48J-0011-R6a-SM-CJI2F 50-59 years, female 139.0
GTEX-T2IS-0011-R6A-SM-32QP2 20-29 years, female 138.8
GTEX-R55E-0011-R6A-SM-2TC5T 20-29 years, male 133.9
GTEX-17MF6-0011-R6b-SM-7LG6G 40-49 years, male 132.3
GTEX-1GF9V-0011-R6b-SM-CJI2Q 60-69 years, male 132.0
GTEX-NL4W-0011-R6a-SM-2I3GA 50-59 years, male 131.7
GTEX-P44G-0011-R6A-SM-2XCD3 30-39 years, male 131.7
GTEX-1A3MX-0011-R6a-SM-7P8S9 60-69 years, male 128.9
GTEX-ZXG5-0011-R6a-SM-57WBZ 60-69 years, male 128.8
GTEX-QDT8-0011-R6A-SM-32PKI 30-39 years, female 128.3
GTEX-15G19-0011-R6b-SM-7KUM3 60-69 years, male 128.1
GTEX-1H3O1-0011-R6b-SM-CL54U 60-69 years, male 127.6
GTEX-1HBPI-0011-R6b-SM-A9G1T 50-59 years, male 126.8
GTEX-1GN1U-0011-R6a-SM-CKZNO 50-59 years, female 126.0
GTEX-15DCD-0011-R6b-SM-6M46L 70-79 years, female 125.3
GTEX-T6MN-0011-R6A-SM-32QP8 50-59 years, male 125.1
GTEX-1LH75-0011-R6a-SM-EXURS 50-59 years, female 124.4
GTEX-12ZZY-0011-R6b-SM-5EGLA 60-69 years, male 122.7
GTEX-18A6Q-0011-R6a-SM-7LG6R 60-69 years, male 122.6
GTEX-ZE9C-0011-R6a-SM-4WWCW 60-69 years, male 122.6
GTEX-13N1W-0011-R6a-SM-5MR43 70-79 years, male 122.5
GTEX-WHSE-0011-R6A-SM-3P5ZP 20-29 years, male 122.1
GTEX-ZVZQ-0011-R6b-SM-57WAY 60-69 years, female 121.4
GTEX-1I1GR-0011-R6a-SM-CMKHI 60-69 years, male 120.4
GTEX-1JMLX-0011-R6b-SM-EXUT9 50-59 years, male 119.9
GTEX-14PN4-0011-R6b-SM-69LQU 50-59 years, male 119.7
GTEX-11NV4-0011-R6a-SM-57WD5 60-69 years, male 119.6
GTEX-13OVH-0011-R6b-SM-5LUAX 70-79 years, male 119.4
GTEX-NPJ7-0011-R6a-SM-2I3G7 60-69 years, female 119.2
GTEX-UTHO-0011-R6A-SM-3GIJW 60-69 years, male 119.2
GTEX-X4XX-0011-R6B-SM-46MWP 60-69 years, male 118.8
GTEX-1N2DW-0011-R6a-SM-EZ6MW 50-59 years, male 118.2
GTEX-13N2G-0011-R6b-SM-5MR3P 60-69 years, male 117.9
GTEX-1B8SF-0011-R6b-SM-7MXUD 60-69 years, male 117.6
GTEX-NL3H-0011-R6a-SM-2I3G8 60-69 years, male 117.2
GTEX-13O3O-0011-R6b-SM-5P9GY 60-69 years, female 115.8
GTEX-1J1OQ-0011-R6a-SM-ARU86 40-49 years, female 115.5
GTEX-13112-0011-R6b-SM-5DUVK 50-59 years, male 115.2
GTEX-17EVQ-0011-R6a-SM-7189U 70-79 years, male 114.2
GTEX-Q2AG-0011-R6A-SM-2HML7 40-49 years, female 114.1
GTEX-ZE7O-0011-R6a-SM-57WCI 50-59 years, female 114.0
GTEX-ZDXO-0011-R6a-SM-4WWCT 60-69 years, male 113.8
GTEX-11OF3-0011-R6b-SM-57WBG 60-69 years, male 113.2
GTEX-1B996-0011-R6b-SM-793AQ 60-69 years, male 113.1
GTEX-13OW6-0011-R6b-SM-5L3GR 50-59 years, male 113.0
GTEX-1H1ZS-0011-R6b-SM-A9G1F 70-79 years, male 112.2
GTEX-13G51-0011-R6b-SM-5LZX4 60-69 years, male 111.7
GTEX-1HUB1-0011-R6b-SM-ARU6W 60-69 years, male 111.2
GTEX-1HGF4-0011-R6a-SM-A96S1 60-69 years, male 110.8
GTEX-13O3Q-0011-R6a-SM-5KM2V 50-59 years, male 110.4
GTEX-XLM4-0011-R6A-SM-4AT4B 60-69 years, male 109.6
GTEX-13X6K-0011-R6a-SM-5P9K6 60-69 years, female 109.5
GTEX-1MJK2-0011-R6a-SM-EXUS3 50-59 years, male 109.4
GTEX-132Q8-0011-R6a-SM-5K7YN 60-69 years, male 109.2
GTEX-QMR6-0011-R6A-SM-32PKP 50-59 years, male 109.2
GTEX-12WSH-0011-R6b-SM-5P9F4 50-59 years, male 108.8
GTEX-13FHP-0011-R6b-SM-5LZY6 50-59 years, male 108.5
GTEX-12ZZZ-0011-R6b-SM-5EQ5B 60-69 years, male 108.3
GTEX-147GR-0011-R6b-SM-5S2RO 60-69 years, male 107.7
GTEX-1IGQW-0011-R6a-SM-CM2TC 60-69 years, male 107.5
GTEX-12WSM-0011-R6b-SM-5EQ6N 60-69 years, male 107.4
GTEX-1BAJH-0011-R6b-SM-7MXT2 70-79 years, male 106.5
GTEX-11NUK-0011-R6a-SM-DO93O 50-59 years, male 105.4
GTEX-14PQA-0011-R6b-SM-6AJAM 50-59 years, female 105.3
GTEX-1HR9M-0011-R6a-SM-ARU6Z 60-69 years, male 105.0
GTEX-1EX96-0011-R6a-SM-9OSVV 50-59 years, male 104.9
GTEX-1IKK5-0011-R6b-SM-A9SLY 60-69 years, male 104.7
GTEX-12WSF-0011-R6b-SM-5HL8W 70-79 years, male 104.4
GTEX-1I1GQ-0011-R6b-SM-CE6SE 50-59 years, male 103.4
GTEX-Y8DK-0011-R6A-SM-4V6EG 60-69 years, male 102.9
GTEX-13FLV-0011-R6a-SM-5KLZ4 50-59 years, male 102.5
GTEX-1H3NZ-0011-R6b-SM-A9G1N 60-69 years, male 101.3
GTEX-11DYG-0011-R6a-SM-DO936 60-69 years, male 100.3
GTEX-131XH-0011-R6a-SM-5KM2G 50-59 years, male 99.8
GTEX-15DYW-0011-R6b-SM-6PALA 60-69 years, female 99.1
GTEX-144GL-0011-R6a-SM-5P9HW 50-59 years, male 98.4
GTEX-17HG3-0011-R6b-SM-79OK8 30-39 years, female 98.3
GTEX-17F97-0011-R6a-SM-7EPGS 50-59 years, male 98.2
GTEX-1J8Q2-0011-R6a-SM-CKZPG 60-69 years, male 98.2
GTEX-12ZZX-0011-R6a-SM-5HL8L 40-49 years, female 97.8
GTEX-RU72-0011-R6A-SM-2TF71 50-59 years, female 97.8
GTEX-183WM-0011-R6b-SM-72D66 70-79 years, female 97.7
GTEX-17HHY-0011-R6b-SM-7189Z 50-59 years, male 97.6
GTEX-18465-0011-R6a-SM-7LG6M 50-59 years, male 97.6
GTEX-1GMRU-0011-R6b-SM-A9G3B 50-59 years, male 97.3
GTEX-1CB4G-0011-R6b-SM-9QEGO 60-69 years, male 96.8
GTEX-1C6VR-0011-R6a-SM-7MXU8 60-69 years, male 96.7
GTEX-13VXU-0011-R6a-SM-5SI71 50-59 years, male 96.5
GTEX-13X6J-0011-R6a-SM-5PNUB 50-59 years, male 96.5
GTEX-14ABY-0011-R6a-SM-5PNWR 50-59 years, male 96.5
GTEX-13OVL-0011-R6a-SM-5L3G4 50-59 years, male 96.3
GTEX-1AX9I-0011-R6a-SM-7P8PK 60-69 years, male 95.8
GTEX-17EVP-0011-R6b-SM-7LT99 40-49 years, male 94.8
GTEX-1H1CY-0011-R6b-SM-CE6RP 60-69 years, female 94.5
GTEX-14JG1-0011-R6b-SM-5YYAU 40-49 years, male 94.1
GTEX-T5JC-0011-R6A-SM-D3L87 20-29 years, male 94.0
GTEX-1I1CD-0011-R6b-SM-CJI3Y 60-69 years, female 93.7
GTEX-15CHQ-0011-R6b-SM-69LOX 60-69 years, male 93.0
GTEX-13RTJ-0011-R6a-SM-5SI74 60-69 years, male 92.5
GTEX-1F6IF-0011-R6a-SM-9QEIO 60-69 years, male 92.2
GTEX-1HBPH-0011-R6a-SM-CKZOV 40-49 years, female 92.0
GTEX-1MA7X-0011-R6a-SM-EYYWR 60-69 years, male 91.9
GTEX-1OJC4-0011-R6a-SM-EXOIM 50-59 years, female 91.7
GTEX-1IDJH-0011-R6a-SM-A9SLZ 70-79 years, male 90.8
GTEX-1LVAO-0011-R6b-SM-EZ6MX 60-69 years, male 90.7
GTEX-15ER7-0011-R6a-SM-6M46M 20-29 years, female 90.2
GTEX-1F6I4-0011-R6a-SM-CE6R4 60-69 years, male 90.2
GTEX-13FLW-0011-R6b-SM-5L3EN 50-59 years, male 88.9
GTEX-13FHO-0011-R6b-SM-5LZX1 60-69 years, male 87.8
GTEX-1IY9M-0011-R6a-SM-D4P28 60-69 years, male 86.9
GTEX-1ICLZ-0011-R6b-SM-A9G3A 60-69 years, male 86.3
GTEX-1GN73-0011-R6b-SM-CJI2T 60-69 years, male 85.7
GTEX-1C6WA-0011-R6a-SM-7PBYP 60-69 years, male 84.5
GTEX-11PRG-0011-R6b-SM-DO923 50-59 years, male 84.4
GTEX-1HT8W-0011-R6a-SM-CM2SY 30-39 years, male 83.9
GTEX-16YQH-0011-R6b-SM-7938T 30-39 years, male 82.7
GTEX-ZAB4-0011-R6a-SM-4SOKD 40-49 years, male 82.5
GTEX-P44H-0011-R6A-SM-2XCF3 40-49 years, male 81.3
GTEX-1GZHY-0011-R6a-SM-9OSWL 50-59 years, female 80.2
GTEX-14E7W-0011-R6b-SM-5ZZV3 70-79 years, male 79.8
GTEX-13S7M-0011-R6b-SM-5O9D8 60-69 years, female 78.6
GTEX-14ASI-0011-R6a-SM-5S2UZ 60-69 years, male 78.4
GTEX-S7SE-0011-R6A-SM-2XCD9 50-59 years, male 78.0
GTEX-1I1GV-0011-R6b-SM-ARU6Q 60-69 years, male 77.9
GTEX-14PJM-0011-R6a-SM-6872G 50-59 years, female 77.1
GTEX-15RJE-0011-R6a-SM-7DHL8 40-49 years, male 77.0
GTEX-WVLH-0011-R6A-SM-3MJFZ 50-59 years, male 76.3
GTEX-WZTO-0011-R6B-SM-4E3J6 40-49 years, male 73.8
GTEX-1I1GS-0011-R6b-SM-CMKHE 60-69 years, male 73.2
GTEX-WL46-0011-R6A-SM-3LK6X 50-59 years, male 72.7
GTEX-1I1HK-0011-R6b-SM-CM2T9 60-69 years, male 72.5
GTEX-1B933-0011-R6b-SM-79OOQ 50-59 years, female 72.4
GTEX-145LS-0011-R6b-SM-5PNWL 60-69 years, female 70.7
GTEX-13FXS-0011-R6b-SM-5L3F7 50-59 years, male 70.2
GTEX-12WSC-0011-R6b-SM-5LU99 50-59 years, male 69.5
GTEX-1399T-0011-R6b-SM-5K7YL 60-69 years, male 69.4
GTEX-11DXY-0011-R6a-SM-DNZZF 60-69 years, male 69.3
GTEX-14JIY-0011-R6b-SM-68714 60-69 years, male 68.4
GTEX-OHPN-0011-R6A-SM-2I5FH 60-69 years, female 68.1
GTEX-18464-0011-R6a-SM-731CA 50-59 years, male 67.2
GTEX-Z93S-0011-R6b-SM-4RGNJ 50-59 years, male 65.6
GTEX-12WSE-0011-R6b-SM-5LZV5 20-29 years, male 65.3
GTEX-1B8L1-0011-R6b-SM-7P8SU 60-69 years, male 65.1
GTEX-1F7RK-0011-R6b-SM-ARZMG 20-29 years, female 63.2
GTEX-ZUA1-0011-R6b-SM-4YCDD 40-49 years, male 62.6
GTEX-YFC4-0011-R6b-SM-4V6E1 40-49 years, female 62.1
GTEX-1F75A-0011-R6b-SM-9QEHD 50-59 years, male 59.6
GTEX-1F75W-0011-R6a-SM-9QEI5 60-69 years, male 59.6
GTEX-X585-0011-R6A-SM-46MVJ 50-59 years, male 59.2
GTEX-N7MS-0011-R6a-SM-2HMJ4 60-69 years, male 58.4
GTEX-14BMV-0011-R6b-SM-5YY9I 50-59 years, male 54.1
GTEX-1313W-0011-R6a-SM-5K7XO 50-59 years, female 52.5
GTEX-1HFI6-0011-R6b-SM-CM2SR 40-49 years, male 49.2
GTEX-14BIN-0011-R6a-SM-5S2RH 50-59 years, female 48.9
GTEX-YJ89-0011-R6a-SM-4V6GN 60-69 years, male 42.7
GTEX-11DXW-0011-R6a-SM-DO11N 40-49 years, male 42.3
GTEX-12WSD-0011-R6b-SM-5P9JU 60-69 years, female 30.5
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Brain - Putamen (basal ganglia)
Average nTPM: 137.8
Samples: 205

Max nTPM: 434.9
Min nTPM: 25.1
Std nTPM: 70.9
Median nTPM: 116.7
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 434.9
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 403.2
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 365.2
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 329.8
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 321.2
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 309.0
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 303.2
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 296.7
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 291.7
GTEX-NPJ8-0011-R7a-SM-2HMJV 40-49 years, male 279.0
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 276.6
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 274.3
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 273.2
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 266.3
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 263.9
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 255.4
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 249.3
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 248.8
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 242.1
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 241.7
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 237.9
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 232.6
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 228.3
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 227.6
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 226.2
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 224.8
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 224.5
GTEX-NL3H-0011-R7a-SM-2I3G5 60-69 years, male 223.4
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 220.8
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 219.8
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 209.8
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 208.6
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 208.0
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 206.9
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 206.6
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 206.1
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 204.1
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 203.1
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 201.9
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 200.3
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 199.0
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 195.2
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 193.1
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 191.4
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 190.3
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 183.2
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 176.1
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 174.7
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 172.5
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 171.5
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 169.6
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 166.0
GTEX-TSE9-0011-R7A-SM-3DB7P 60-69 years, female 164.4
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 164.2
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 158.0
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 153.1
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 151.6
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 151.2
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 149.4
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 148.9
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 148.5
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 148.3
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 147.7
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 147.6
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 147.1
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 147.0
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 146.8
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 146.5
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 146.4
GTEX-P44G-0011-R7A-SM-2I3F9 30-39 years, male 145.0
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 144.8
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 144.5
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 144.3
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 142.8
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 142.1
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 141.2
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 140.6
GTEX-1J1OQ-0011-R7b-SM-ARU87 40-49 years, female 139.8
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 139.6
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 139.4
GTEX-QVJO-0011-R7A-SM-2S1QO 60-69 years, female 138.8
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 137.8
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 135.7
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 135.3
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 135.1
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 134.4
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 134.4
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 133.8
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 133.2
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 133.0
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 130.8
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 130.8
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 127.3
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 126.8
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 123.3
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 123.3
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 122.6
GTEX-1IOXB-0011-R7b-SM-CE6SM 50-59 years, male 119.0
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 118.9
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 118.4
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 118.0
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 117.8
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 116.7
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 116.4
GTEX-OHPN-0011-R7A-SM-2I5FI 60-69 years, female 116.3
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 116.3
GTEX-RU72-0011-R7A-SM-2TF5U 50-59 years, female 115.7
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 115.4
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 114.8
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 114.5
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 114.1
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 114.0
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 113.8
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 113.7
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 112.0
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 110.2
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 107.4
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 107.2
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 106.1
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 106.0
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 105.9
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 105.4
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 104.8
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 104.6
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 103.9
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 103.7
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 103.2
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 103.1
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 102.5
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 102.3
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 101.7
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 101.3
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 100.7
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 100.1
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 99.9
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 98.7
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 98.0
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 97.0
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 96.8
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 95.2
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 95.1
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 95.1
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 94.2
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 94.0
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 93.1
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 92.6
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 91.8
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 91.4
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 91.3
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 90.1
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 90.1
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 89.9
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 89.9
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 87.9
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 87.8
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 87.1
GTEX-S7SE-0011-R7A-SM-2XCDI 50-59 years, male 87.0
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 86.9
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 86.0
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 86.0
GTEX-18464-0011-R7b-SM-731CM 50-59 years, male 86.0
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 84.0
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 83.4
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 83.2
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 82.6
GTEX-R55E-0011-R7A-SM-2TC5Z 20-29 years, male 80.0
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 79.9
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 79.4
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 78.0
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 76.9
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 75.4
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 75.3
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 75.3
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 74.3
GTEX-N7MS-0011-R7a-SM-2HMKN 60-69 years, male 73.8
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 73.5
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 72.2
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 71.9
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 71.7
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 71.6
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 71.1
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 70.8
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 69.9
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 69.7
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 69.4
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 66.5
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 65.0
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 64.6
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 63.4
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 63.2
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 62.0
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 61.8
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 61.7
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 60.3
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 56.7
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 56.4
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 56.2
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 55.0
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 49.0
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 48.4
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 48.3
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 45.8
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 43.6
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 41.6
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 25.1
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BASAL GANGLIA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

256.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 256.6
FF:10164-103B2 76 years, female 256.6
Nucleus accumbens
Scaled Tags Per Million: 115.7
FF:10037-101F1 23-56 years, mixed 115.7
Putamen
Scaled Tags Per Million: 163.5
FF:10176-103C5 60 years, female 163.5
Globus pallidus
Scaled Tags Per Million: 195.5
FF:10175-103C4 60 years, female 224.4
FF:10161-103A8 76 years, female 166.7

BASAL GANGLIA - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

17.7
Pig sample Sample description nTPM
Caudate
nTPM: 13.2
Samples: 4

Max nTPM: 17.1
Min nTPM: 10.7
Sample A Female 12.3
Sample B Female 12.7
Sample C Male 17.1
Sample D Male 10.7
Putamen
nTPM: 16.8
Samples: 4

Max nTPM: 24.2
Min nTPM: 10.6
Sample A Female 24.2
Sample B Female 10.6
Sample C Male 14.5
Sample D Male 18.0
Septum
nTPM: 17.8
Samples: 4

Max nTPM: 24.5
Min nTPM: 12.6
Sample A Female 19.9
Sample B Female 14.0
Sample C Male 24.5
Sample D Male 12.6
Ventral pallidum
nTPM: 14.5
Samples: 4

Max nTPM: 15.9
Min nTPM: 11.9
Sample A Female 11.9
Sample B Female 14.2
Sample C Male 15.9
Sample D Male 15.9

BASAL GANGLIA - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

13.8
Mouse sample Sample description nTPM
Caudate putamen
nTPM: 9.9
Samples: 4

Max nTPM: 10.5
Min nTPM: 9.1
Sample A Male 9.1
Sample B Male 9.8
Sample C Female 10.2
Sample D Female 10.5
Septum
nTPM: 13.8
Samples: 4

Max nTPM: 17.5
Min nTPM: 11.1
Sample A Male 11.1
Sample B Male 17.5
Sample C Female 14.6
Sample D Female 11.9
Ventral forebrain
nTPM: 12.8
Samples: 4

Max nTPM: 16.3
Min nTPM: 10.7
Sample A Male 10.9
Sample B Male 13.1
Sample C Female 16.3
Sample D Female 10.7

BASAL GANGLIA - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

3.3
Allen experiment id Experiment description Expression energy
Striatum
Expression energy: 3.3
69080003 Antisense, RP_050324_01_C03, Mouse strain C57BL/6J (56 days, male) 6.6
71919254 Antisense, RP_051012_02_C06, Mouse strain C57BL/6J (56 days, male) 0.0
Pallidum
Expression energy: 2.9
69080003 Antisense, RP_050324_01_C03, Mouse strain C57BL/6J (56 days, male) 5.8
71919254 Antisense, RP_051012_02_C06, Mouse strain C57BL/6J (56 days, male) 0.0

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