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BRAIN BASAL GANGLIA Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS MEDULLA OBLONGATA
MIDBRAIN OLFACTORY BULB PITUITARY GLAND PONS RETINA SPINAL CORD THALAMUS WHITE MATTER
PRIMARY MOUSE DATA
ANTIBODIES
AND
VALIDATION
Brain proteome
Basal ganglia
BASAL GANGLIA - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:81.3 nTPM
HPA Brain:213.0 nTPM
GTEx:81.3 nTPM
FANTOM5:169.4 Scaled Tags Per Million
Pig:106.8 nTPM
Mouse:120.8 nTPM
Allen mouse:9.7 Expression energy

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA051336
Glial cells Not detected
Neuronal cells Medium



BASAL GANGLIA - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

213.0
Sample id Sample description nTPM
Caudate nucleus
nTPM: 127.5
1781 Male, age 74, unknown 166.9
2290 Female, age 72, unknown 163.8
1857 Female, age 85, left hemisphere 136.0
2846 Female, age 79, unknown 131.8
2289 Male, age 61, right hemisphere 123.7
2288 Male, age 75, left hemisphere 113.6
1854 Male, age 80, left hemisphere 109.5
2481 Female, age 94, left hemisphere 74.8
Globus pallidus, externus
nTPM: 54.5
2646 Male, age 61, right hemisphere 69.1
2567 Female, age 72, unknown 58.9
2772 Female, age 79, unknown 58.1
2395 Male, age 75, both hemispheres 49.5
1996 Male, age 80, right hemisphere 36.7
Globus pallidus, internus
nTPM: 46.6
2483 Female, age 94, right hemisphere 60.9
2566 Female, age 72, unknown 52.1
2287 Male, age 75, right hemisphere 50.7
2111 Female, age 85, right hemisphere 43.5
1818 Male, age 74, unknown 42.2
2778 Female, age 91, both hemispheres 41.4
2037 Male, age 80, right hemisphere 35.2
Nucleus accumbens
nTPM: 109.5
1783 Male, age 74, unknown 168.2
1806 Female, age 85, left hemisphere 134.5
1856 Female, age 91, right hemisphere 126.2
2824 Male, age 61, right hemisphere 116.5
2286 Male, age 75, left hemisphere 109.2
2698 Female, age 72, unknown 89.3
2732 Male, age 80, right hemisphere 66.3
2391 Female, age 94, left hemisphere 65.6
Nucleus basalis of Meynert
nTPM: 90.2
2484 Female, age 94, left hemisphere 106.3
2393 Male, age 80, right hemisphere 93.1
2821 Male, age 75, both hemispheres 83.9
2569 Male, age 61, both hemispheres 77.6
Nucleus of the diagonal band
nTPM: 213.0
2029 Male, age 61, right hemisphere 258.2
2195 Female, age 85, both hemispheres 256.8
2775 Male, age 80, right hemisphere 255.5
1812 Female, age 91, both hemispheres 202.7
1979 Male, age 74, unknown 91.9
Putamen
nTPM: 124.2
2647 Male, age 75, left hemisphere 148.5
2466 Female, age 79, unknown 142.3
2489 Female, age 72, unknown 135.1
1829 Male, age 74, unknown 134.9
1838 Male, age 80, right hemisphere 115.8
1937 Female, age 91, right hemisphere 112.2
2482 Female, age 94, left hemisphere 80.6
Septal nuclei
nTPM: 200.0
1960 Male, age 74, unknown 352.5
2031 Female, age 72, unknown 256.1
2059 Female, age 85, both hemispheres 219.8
2629 Female, age 94, right hemisphere 197.4
2009 Female, age 91, both hemispheres 183.5
2394 Male, age 61, left hemisphere 104.4
2199 Male, age 80, right hemisphere 86.2
Stria terminalis, bed nucleus
nTPM: 185.2
2486 Female, age 94, both hemispheres 240.5
1974 Female, age 91, both hemispheres 239.8
2201 Male, age 74, unknown 75.4

BASAL GANGLIA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

81.3
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 80.3
Samples: 246

Max nTPM: 226.0
Min nTPM: 13.6
Std nTPM: 40.5
Median nTPM: 79.3
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 226.0
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 196.0
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 177.5
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 177.2
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 171.7
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 166.8
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 166.7
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 157.2
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 156.9
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 155.9
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 152.7
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 150.9
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 149.7
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 149.3
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 148.4
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 148.3
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 145.1
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 137.1
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 136.8
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 135.9
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 134.4
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 134.0
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 131.3
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 130.8
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 129.9
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 129.9
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 129.8
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 127.7
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 127.2
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 126.0
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 126.0
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 124.8
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 123.7
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 123.3
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 123.1
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 123.1
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 121.9
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 120.7
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 120.1
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 119.7
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 119.0
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 118.5
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 117.8
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 117.3
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 117.2
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 115.9
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 115.2
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 115.0
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 114.3
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 114.3
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 113.2
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 112.6
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 111.5
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 111.0
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 110.5
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 109.8
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 109.5
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 109.1
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 108.5
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 107.9
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 107.7
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 107.5
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 107.5
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 107.0
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 106.8
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 105.9
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 105.9
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 104.6
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 104.2
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 104.0
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 103.9
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 103.1
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 103.1
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 102.8
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 102.4
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 102.3
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 102.2
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 101.5
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 100.9
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 100.4
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 100.3
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 99.6
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 99.1
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 98.8
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 97.6
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 97.5
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 96.9
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 96.7
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 96.6
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 96.3
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 95.9
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 95.7
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 94.7
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 94.3
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 93.7
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 92.0
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 91.5
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 91.4
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 91.3
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 91.3
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 91.0
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 90.9
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 90.2
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 90.1
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 89.9
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 88.4
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 88.4
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 87.9
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 87.8
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 87.8
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 87.7
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 87.0
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 86.6
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 84.5
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 84.1
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 82.5
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 82.4
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 82.0
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 81.7
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 80.5
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 79.8
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 79.5
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 79.4
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 79.3
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 78.7
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 78.6
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 78.2
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 77.8
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 76.8
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 76.5
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 76.2
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 76.0
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 75.8
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 75.7
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 75.4
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 75.0
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 74.9
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 74.7
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 73.9
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 73.3
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 72.7
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 72.7
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 72.4
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 72.1
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 71.1
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 71.1
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 71.0
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 69.0
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 68.8
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 67.7
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 67.7
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 66.9
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 66.1
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 65.9
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 65.7
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 65.4
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 65.1
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 64.8
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 63.3
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 62.8
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 62.7
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 62.6
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 62.5
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 62.4
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 60.7
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 60.6
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 59.8
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 59.4
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 58.5
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 58.1
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 56.7
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 55.8
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 55.4
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 55.4
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 54.1
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 51.7
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 50.4
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 48.8
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 48.3
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 48.3
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 47.8
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 47.4
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 46.6
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 45.7
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 44.5
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 44.3
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 44.2
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 44.1
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 42.6
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 40.0
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 39.6
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 38.3
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 38.1
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 37.9
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 36.9
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 36.7
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 36.4
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 36.3
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 35.1
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 35.1
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 34.8
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 34.7
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 34.7
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 34.2
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 34.0
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 33.6
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 32.9
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 31.7
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 31.5
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 31.5
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 30.8
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 30.7
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 30.5
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 30.4
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 30.4
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 30.4
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 30.2
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 29.2
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 29.1
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 28.9
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 28.2
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 26.4
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 25.0
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 24.9
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 24.8
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 24.8
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 24.6
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 24.0
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 23.6
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 23.4
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 23.2
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 23.0
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 22.5
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 22.4
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 22.0
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 21.9
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 19.7
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 19.6
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 17.4
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 17.1
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 16.6
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 16.3
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 14.0
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 13.7
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 13.6
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 13.6
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Brain - Nucleus accumbens (basal ganglia)
Average nTPM: 81.3
Samples: 246

Max nTPM: 144.0
Min nTPM: 10.4
Std nTPM: 31.9
Median nTPM: 87.5
GTEX-12ZZZ-0011-R6b-SM-5EQ5B 60-69 years, male 144.0
GTEX-11NV4-0011-R6a-SM-57WD5 60-69 years, male 143.9
GTEX-12WSH-0011-R6b-SM-5P9F4 50-59 years, male 142.9
GTEX-13NYB-0011-R6b-SM-5MR51 40-49 years, male 142.6
GTEX-1F7RK-0011-R6b-SM-ARZMG 20-29 years, female 141.8
GTEX-18465-0011-R6a-SM-7LG6M 50-59 years, male 141.4
GTEX-WHSE-0011-R6A-SM-3P5ZP 20-29 years, male 138.5
GTEX-1MJK2-0011-R6a-SM-EXUS3 50-59 years, male 132.8
GTEX-11OF3-0011-R6b-SM-57WBG 60-69 years, male 132.3
GTEX-1I1CD-0011-R6b-SM-CJI3Y 60-69 years, female 129.7
GTEX-1F75A-0011-R6b-SM-9QEHD 50-59 years, male 128.5
GTEX-13FHO-0011-R6b-SM-5LZX1 60-69 years, male 127.3
GTEX-13FLV-0011-R6a-SM-5KLZ4 50-59 years, male 127.0
GTEX-12WSC-0011-R6b-SM-5LU99 50-59 years, male 126.7
GTEX-1I1GR-0011-R6a-SM-CMKHI 60-69 years, male 126.0
GTEX-ZDXO-0011-R6a-SM-4WWCT 60-69 years, male 125.2
GTEX-Q2AG-0011-R6A-SM-2HML7 40-49 years, female 123.5
GTEX-13N2G-0011-R6b-SM-5MR3P 60-69 years, male 122.3
GTEX-1313W-0011-R6a-SM-5K7XO 50-59 years, female 122.2
GTEX-13FHP-0011-R6b-SM-5LZY6 50-59 years, male 120.9
GTEX-139TT-0011-R6b-SM-5J2ON 60-69 years, male 120.7
GTEX-1HT8W-0011-R6a-SM-CM2SY 30-39 years, male 120.4
GTEX-1E1VI-0011-R6a-SM-9OSVJ 50-59 years, male 120.0
GTEX-13O3O-0011-R6b-SM-5P9GY 60-69 years, female 119.8
GTEX-1J8Q2-0011-R6a-SM-CKZPG 60-69 years, male 119.6
GTEX-1GF9V-0011-R6b-SM-CJI2Q 60-69 years, male 118.5
GTEX-12ZZX-0011-R6a-SM-5HL8L 40-49 years, female 117.9
GTEX-13OVL-0011-R6a-SM-5L3G4 50-59 years, male 116.3
GTEX-1HUB1-0011-R6b-SM-ARU6W 60-69 years, male 116.1
GTEX-14BIN-0011-R6a-SM-5S2RH 50-59 years, female 116.0
GTEX-1F6I4-0011-R6a-SM-CE6R4 60-69 years, male 116.0
GTEX-1AX9I-0011-R6a-SM-7P8PK 60-69 years, male 115.7
GTEX-1HBPI-0011-R6b-SM-A9G1T 50-59 years, male 115.4
GTEX-14ASI-0011-R6a-SM-5S2UZ 60-69 years, male 114.2
GTEX-18A6Q-0011-R6a-SM-7LG6R 60-69 years, male 114.1
GTEX-17HG3-0011-R6b-SM-79OK8 30-39 years, female 113.8
GTEX-13S7M-0011-R6b-SM-5O9D8 60-69 years, female 113.5
GTEX-N7MS-0011-R6a-SM-2HMJ4 60-69 years, male 113.3
GTEX-12WSM-0011-R6b-SM-5EQ6N 60-69 years, male 113.2
GTEX-12WSF-0011-R6b-SM-5HL8W 70-79 years, male 112.7
GTEX-1IDJH-0011-R6a-SM-A9SLZ 70-79 years, male 111.5
GTEX-12ZZY-0011-R6b-SM-5EGLA 60-69 years, male 111.3
GTEX-13O3Q-0011-R6a-SM-5KM2V 50-59 years, male 109.9
GTEX-13X6J-0011-R6a-SM-5PNUB 50-59 years, male 109.8
GTEX-18464-0011-R6a-SM-731CA 50-59 years, male 109.6
GTEX-WZTO-0011-R6B-SM-4E3J6 40-49 years, male 109.6
GTEX-13112-0011-R6b-SM-5DUVK 50-59 years, male 109.3
GTEX-1HBPH-0011-R6a-SM-CKZOV 40-49 years, female 108.7
GTEX-13OW6-0011-R6b-SM-5L3GR 50-59 years, male 108.3
GTEX-14JG1-0011-R6b-SM-5YYAU 40-49 years, male 107.6
GTEX-15ER7-0011-R6a-SM-6M46M 20-29 years, female 107.6
GTEX-12ZZW-0011-R6a-SM-5DUVZ 50-59 years, male 107.4
GTEX-17MF6-0011-R6b-SM-7LG6G 40-49 years, male 107.2
GTEX-1GTWX-0011-R6a-SM-A96RN 60-69 years, male 105.8
GTEX-1HGF4-0011-R6a-SM-A96S1 60-69 years, male 104.8
GTEX-1JJEA-0011-R6a-SM-EXUS1 60-69 years, male 104.7
GTEX-131XH-0011-R6a-SM-5KM2G 50-59 years, male 104.1
GTEX-17F97-0011-R6a-SM-7EPGS 50-59 years, male 104.0
GTEX-14PN4-0011-R6b-SM-69LQU 50-59 years, male 103.9
GTEX-14BMV-0011-R6b-SM-5YY9I 50-59 years, male 103.8
GTEX-1GZ2Q-0011-R6a-SM-9OSWM 40-49 years, male 103.6
GTEX-11DXY-0011-R6a-SM-DNZZF 60-69 years, male 103.4
GTEX-13SLX-0011-R6a-SM-5PNX4 50-59 years, female 103.3
GTEX-12WSE-0011-R6b-SM-5LZV5 20-29 years, male 102.8
GTEX-14ABY-0011-R6a-SM-5PNWR 50-59 years, male 102.8
GTEX-1HR9M-0011-R6a-SM-ARU6Z 60-69 years, male 102.7
GTEX-1HB9E-0011-R6b-SM-A9G1P 50-59 years, male 102.4
GTEX-Z93S-0011-R6b-SM-4RGNJ 50-59 years, male 102.0
GTEX-1F75W-0011-R6a-SM-9QEI5 60-69 years, male 101.9
GTEX-13IVO-0011-R6b-SM-5K7X9 70-79 years, male 100.3
GTEX-144GL-0011-R6a-SM-5P9HW 50-59 years, male 100.0
GTEX-WWYW-0011-R6A-SM-3NB3G 50-59 years, female 100.0
GTEX-1GF9W-0011-R6b-SM-9QEIE 60-69 years, male 100.0
GTEX-1I1GQ-0011-R6b-SM-CE6SE 50-59 years, male 99.7
GTEX-1EX96-0011-R6a-SM-9OSVV 50-59 years, male 99.6
GTEX-1B933-0011-R6b-SM-79OOQ 50-59 years, female 99.3
GTEX-1GN1U-0011-R6a-SM-CKZNO 50-59 years, female 99.1
GTEX-1JMLX-0011-R6b-SM-EXUT9 50-59 years, male 99.1
GTEX-144GO-0011-R6b-SM-5S2V7 60-69 years, male 99.0
GTEX-T5JC-0011-R6A-SM-D3L87 20-29 years, male 99.0
GTEX-1H3NZ-0011-R6b-SM-A9G1N 60-69 years, male 98.9
GTEX-14PJM-0011-R6a-SM-6872G 50-59 years, female 98.8
GTEX-1B8SF-0011-R6b-SM-7MXUD 60-69 years, male 98.8
GTEX-13QJC-0011-R6a-SM-5S2VI 60-69 years, female 98.7
GTEX-13VXU-0011-R6a-SM-5SI71 50-59 years, male 98.4
GTEX-14JIY-0011-R6b-SM-68714 60-69 years, male 98.3
GTEX-X585-0011-R6A-SM-46MVJ 50-59 years, male 98.0
GTEX-1I1GV-0011-R6b-SM-ARU6Q 60-69 years, male 97.7
GTEX-145MH-0011-R6a-SM-5PNZ7 50-59 years, male 97.6
GTEX-R55E-0011-R6A-SM-2TC5T 20-29 years, male 97.4
GTEX-13JUV-0011-R6b-SM-5LZYG 40-49 years, female 97.1
GTEX-145LS-0011-R6b-SM-5PNWL 60-69 years, female 96.2
GTEX-1GN73-0011-R6b-SM-CJI2T 60-69 years, male 95.7
GTEX-1GZ4I-0011-R6b-SM-9WG77 50-59 years, male 95.7
GTEX-11ONC-0011-R6a-SM-DO12A 60-69 years, male 95.3
GTEX-14E7W-0011-R6b-SM-5ZZV3 70-79 years, male 95.0
GTEX-16YQH-0011-R6b-SM-7938T 30-39 years, male 94.9
GTEX-1OJC4-0011-R6a-SM-EXOIM 50-59 years, female 94.9
GTEX-14PQA-0011-R6b-SM-6AJAM 50-59 years, female 94.6
GTEX-17EVQ-0011-R6a-SM-7189U 70-79 years, male 94.3
GTEX-1EMGI-0011-R6a-SM-9OSVR 60-69 years, male 93.8
GTEX-147GR-0011-R6b-SM-5S2RO 60-69 years, male 93.7
GTEX-ZE9C-0011-R6a-SM-4WWCW 60-69 years, male 93.3
GTEX-TSE9-0011-R6A-SM-3DB7L 60-69 years, female 93.2
GTEX-13G51-0011-R6b-SM-5LZX4 60-69 years, male 93.1
GTEX-13X6K-0011-R6a-SM-5P9K6 60-69 years, female 92.7
GTEX-1CB4G-0011-R6b-SM-9QEGO 60-69 years, male 92.1
GTEX-1F6IF-0011-R6a-SM-9QEIO 60-69 years, male 92.1
GTEX-1IKK5-0011-R6b-SM-A9SLY 60-69 years, male 92.1
GTEX-X4XX-0011-R6B-SM-46MWP 60-69 years, male 92.0
GTEX-145LU-0011-R6a-SM-5S2V6 50-59 years, male 91.7
GTEX-17HHY-0011-R6b-SM-7189Z 50-59 years, male 91.5
GTEX-YJ89-0011-R6a-SM-4V6GN 60-69 years, male 91.0
GTEX-11PRG-0011-R6b-SM-DO923 50-59 years, male 90.7
GTEX-11DZ1-0011-R6b-SM-DNZZG 50-59 years, male 90.5
GTEX-S7SE-0011-R6A-SM-2XCD9 50-59 years, male 90.2
GTEX-13RTJ-0011-R6a-SM-5SI74 60-69 years, male 89.9
GTEX-1F88E-0011-R6a-SM-CKZNW 60-69 years, female 89.9
GTEX-XLM4-0011-R6A-SM-4AT4B 60-69 years, male 89.3
GTEX-13FLW-0011-R6b-SM-5L3EN 50-59 years, male 89.0
GTEX-14BIM-0011-R6b-SM-5S2VB 60-69 years, female 88.4
GTEX-17EVP-0011-R6b-SM-7LT99 40-49 years, male 87.9
GTEX-1GMRU-0011-R6b-SM-A9G3B 50-59 years, male 87.8
GTEX-15RJE-0011-R6a-SM-7DHL8 40-49 years, male 87.2
GTEX-ZXG5-0011-R6a-SM-57WBZ 60-69 years, male 87.0
GTEX-1H1CY-0011-R6b-SM-CE6RP 60-69 years, female 86.6
GTEX-NPJ7-0011-R6a-SM-2I3G7 60-69 years, female 86.5
GTEX-Y8DK-0011-R6A-SM-4V6EG 60-69 years, male 86.5
GTEX-11TTK-0011-R6b-SM-DNZZW 60-69 years, female 86.2
GTEX-1IY9M-0011-R6a-SM-D4P28 60-69 years, male 86.1
GTEX-13NYS-0011-R6b-SM-5MR3R 60-69 years, male 86.0
GTEX-1GMR8-0011-R6b-SM-CE6RC 50-59 years, female 85.8
GTEX-1LVAO-0011-R6b-SM-EZ6MX 60-69 years, male 85.5
GTEX-15CHQ-0011-R6b-SM-69LOX 60-69 years, male 85.2
GTEX-1J1OQ-0011-R6a-SM-ARU86 40-49 years, female 84.6
GTEX-T2IS-0011-R6A-SM-32QP2 20-29 years, female 84.4
GTEX-1ICLZ-0011-R6b-SM-A9G3A 60-69 years, male 83.2
GTEX-NL3H-0011-R6a-SM-2I3G8 60-69 years, male 83.0
GTEX-1A3MX-0011-R6a-SM-7P8S9 60-69 years, male 83.0
GTEX-NL4W-0011-R6a-SM-2I3GA 50-59 years, male 82.4
GTEX-ZVZQ-0011-R6b-SM-57WAY 60-69 years, female 82.3
GTEX-11WQC-0011-R6a-SM-5BC77 60-69 years, male 82.2
GTEX-1LVA9-0011-R6a-SM-EYYWH 50-59 years, male 82.0
GTEX-1H1DG-0011-R6a-SM-A9SK8 70-79 years, male 81.9
GTEX-14C5O-0011-R6a-SM-5YYB6 60-69 years, male 81.4
GTEX-1B8L1-0011-R6b-SM-7P8SU 60-69 years, male 81.1
GTEX-WVLH-0011-R6A-SM-3MJFZ 50-59 years, male 80.0
GTEX-147F4-0011-R6b-SM-5S2UP 50-59 years, male 79.8
GTEX-1EKGG-0011-R6a-SM-CL538 60-69 years, male 79.7
GTEX-1MA7X-0011-R6a-SM-EYYWR 60-69 years, male 79.7
GTEX-1B996-0011-R6b-SM-793AQ 60-69 years, male 79.5
GTEX-1H1ZS-0011-R6b-SM-A9G1F 70-79 years, male 78.6
GTEX-1C6VR-0011-R6a-SM-7MXU8 60-69 years, male 78.0
GTEX-13JVG-0011-R6a-SM-5MR3E 60-69 years, male 77.3
GTEX-P44G-0011-R6A-SM-2XCD3 30-39 years, male 77.1
GTEX-1H4P4-0011-R6a-SM-ARZLR 50-59 years, male 76.8
GTEX-T6MN-0011-R6A-SM-32QP8 50-59 years, male 76.3
GTEX-14LZ3-0011-R6a-SM-D3L8C 60-69 years, female 75.3
GTEX-1BAJH-0011-R6b-SM-7MXT2 70-79 years, male 74.7
GTEX-11O72-0011-R6a-SM-DNZZQ 40-49 years, male 74.4
GTEX-N7MT-0011-R6a-SM-2I3G3 60-69 years, female 74.3
GTEX-1192X-0011-R6a-SM-DNZZB 50-59 years, male 72.8
GTEX-RU72-0011-R6A-SM-2TF71 50-59 years, female 72.6
GTEX-1399T-0011-R6b-SM-5K7YL 60-69 years, male 72.3
GTEX-1N2DW-0011-R6a-SM-EZ6MW 50-59 years, male 72.0
GTEX-15DYW-0011-R6b-SM-6PALA 60-69 years, female 69.9
GTEX-QVJO-0011-R6A-SM-2S1QN 60-69 years, female 69.8
GTEX-15G19-0011-R6b-SM-7KUM3 60-69 years, male 69.6
GTEX-1I1GS-0011-R6b-SM-CMKHE 60-69 years, male 68.8
GTEX-11NUK-0011-R6a-SM-DO93O 50-59 years, male 68.3
GTEX-13OW8-0011-R6b-SM-5L3I3 60-69 years, male 66.5
GTEX-13SLW-0011-R6a-SM-5O9BH 70-79 years, male 65.8
GTEX-XMD1-0011-R6A-SM-4AT5K 60-69 years, male 65.0
GTEX-15DCD-0011-R6b-SM-6M46L 70-79 years, female 64.0
GTEX-QMR6-0011-R6A-SM-32PKP 50-59 years, male 63.1
GTEX-13FXS-0011-R6b-SM-5L3F7 50-59 years, male 62.4
GTEX-UTHO-0011-R6A-SM-3GIJW 60-69 years, male 62.3
GTEX-1445S-0011-R6b-SM-5PNUF 60-69 years, male 62.1
GTEX-ZE7O-0011-R6a-SM-57WCI 50-59 years, female 61.8
GTEX-1LH75-0011-R6a-SM-EXURS 50-59 years, female 60.2
GTEX-1IGQW-0011-R6a-SM-CM2TC 60-69 years, male 60.0
GTEX-WL46-0011-R6A-SM-3LK6X 50-59 years, male 58.7
GTEX-132Q8-0011-R6a-SM-5K7YN 60-69 years, male 57.6
GTEX-1GN2E-0011-R6b-SM-9QEII 60-69 years, male 57.4
GTEX-17JCI-0011-R6a-SM-72D6D 60-69 years, female 56.9
GTEX-1I19N-0011-R6b-SM-CY8GC 70-79 years, male 56.7
GTEX-13OVH-0011-R6b-SM-5LUAX 70-79 years, male 56.2
GTEX-1I1HK-0011-R6b-SM-CM2T9 60-69 years, male 56.1
GTEX-1A8G6-0011-R6b-SM-7P8PE 60-69 years, male 55.1
GTEX-1F48J-0011-R6a-SM-CJI2F 50-59 years, female 55.1
GTEX-1GZHY-0011-R6a-SM-9OSWL 50-59 years, female 54.1
GTEX-NPJ8-0011-R6a-SM-2HMKB 40-49 years, male 54.0
GTEX-QVUS-0011-R6A-SM-3GACX 60-69 years, female 54.0
GTEX-183WM-0011-R6b-SM-72D66 70-79 years, female 53.7
GTEX-1R46S-0011-R6a-SM-EZ6N6 60-69 years, female 52.1
GTEX-12584-0011-R6a-SM-5NQ7C 40-49 years, male 50.2
GTEX-11DXW-0011-R6a-SM-DO11N 40-49 years, male 49.1
GTEX-13OVJ-0011-R6b-SM-5L3GH 50-59 years, female 47.5
GTEX-11GSP-0011-R6b-SM-57WBQ 60-69 years, female 45.8
GTEX-12WSD-0011-R6b-SM-5P9JU 60-69 years, female 45.5
GTEX-1IL2U-0011-R6a-SM-ARZLG 60-69 years, male 42.3
GTEX-ZV68-0011-R6a-SM-51MSR 50-59 years, female 42.0
GTEX-1LB8K-0011-R6a-SM-EXURT 50-59 years, male 41.8
GTEX-13N1W-0011-R6a-SM-5MR43 70-79 years, male 41.6
GTEX-1EH9U-0011-R6a-SM-CJI2C 60-69 years, male 41.2
GTEX-1C64N-0011-R6a-SM-7IGO9 50-59 years, male 40.1
GTEX-1EN7A-0011-R6b-SM-9QEHW 40-49 years, male 38.2
GTEX-16Z82-0011-R6a-SM-7IGLV 60-69 years, male 36.9
GTEX-ZAB4-0011-R6a-SM-4SOKD 40-49 years, male 36.8
GTEX-13OW5-0011-R6b-SM-5O9BW 60-69 years, male 36.7
GTEX-15EO6-0011-R6a-SM-7KULK 50-59 years, male 36.7
GTEX-11DYG-0011-R6a-SM-DO936 60-69 years, male 36.7
GTEX-1EWIQ-0011-R6a-SM-ARU8G 70-79 years, female 36.5
GTEX-ZVT3-0011-R6a-SM-51MSU 60-69 years, female 36.0
GTEX-1C6WA-0011-R6a-SM-7PBYP 60-69 years, male 35.3
GTEX-1HBPM-0011-R6b-SM-ARU73 60-69 years, female 35.2
GTEX-1H23P-0011-R6b-SM-A9G1H 60-69 years, male 33.7
GTEX-X261-0011-R6B-SM-4E3J8 50-59 years, male 33.6
GTEX-OHPN-0011-R6A-SM-2I5FH 60-69 years, female 33.5
GTEX-S7PM-0011-R6A-SM-3NM8F 60-69 years, male 32.9
GTEX-1IKOH-0011-R6b-SM-A9G1W 60-69 years, female 31.4
GTEX-1F75B-0011-R6a-SM-ARZMI 50-59 years, male 31.3
GTEX-139TS-0011-R6a-SM-5J2OB 60-69 years, male 31.2
GTEX-13PL6-0011-R6a-SM-5O9C5 40-49 years, female 30.8
GTEX-1H3O1-0011-R6b-SM-CL54U 60-69 years, male 30.7
GTEX-13PDP-0011-R6b-SM-5O9D5 60-69 years, male 30.3
GTEX-1E2YA-0011-R6b-SM-CE6R2 50-59 years, male 29.5
GTEX-X4XY-0011-R6B-SM-46MVB 60-69 years, male 28.6
GTEX-1H3VE-0011-R6b-SM-A9G1M 40-49 years, male 28.6
GTEX-YFC4-0011-R6b-SM-4V6E1 40-49 years, female 27.3
GTEX-X4EP-0011-R6A-SM-3P629 60-69 years, female 26.1
GTEX-1HFI6-0011-R6b-SM-CM2SR 40-49 years, male 25.4
GTEX-131XW-0011-R6b-SM-5K7XY 50-59 years, female 24.8
GTEX-14PHW-0011-R6b-SM-5YYAR 60-69 years, female 24.2
GTEX-16XZZ-0011-R6a-SM-7IGNE 60-69 years, male 24.1
GTEX-PWO3-0011-R6A-SM-2I5F3 60-69 years, female 22.3
GTEX-1CB4H-0011-R6b-SM-CKZNK 60-69 years, female 22.3
GTEX-QDT8-0011-R6A-SM-32PKI 30-39 years, female 21.3
GTEX-1LC47-0011-R6b-SM-EZ6MI 60-69 years, male 20.6
GTEX-ZUA1-0011-R6b-SM-4YCDD 40-49 years, male 20.4
GTEX-ZF28-0011-R6a-SM-4WKHI 60-69 years, male 19.7
GTEX-1CB4J-0011-R6b-SM-9WG7B 60-69 years, male 19.7
GTEX-145MI-0011-R6a-SM-5PNZA 60-69 years, female 19.0
GTEX-14753-0011-R6b-SM-5S2UD 60-69 years, male 17.8
GTEX-1RLM8-0011-R6a-SM-EYYXS 50-59 years, male 14.9
GTEX-P44H-0011-R6A-SM-2XCF3 40-49 years, male 10.4
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Brain - Putamen (basal ganglia)
Average nTPM: 75.5
Samples: 205

Max nTPM: 196.5
Min nTPM: 12.2
Std nTPM: 36.9
Median nTPM: 77.2
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 196.5
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 177.4
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 170.6
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 163.4
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 151.7
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 150.3
GTEX-S7SE-0011-R7A-SM-2XCDI 50-59 years, male 142.6
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 142.2
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 142.1
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 138.2
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 134.6
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 133.4
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 132.1
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 129.5
GTEX-P44G-0011-R7A-SM-2I3F9 30-39 years, male 128.6
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 128.1
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 127.9
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 124.8
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 121.4
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 120.3
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 119.4
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 119.1
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 117.6
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 116.7
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 116.7
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 116.6
GTEX-R55E-0011-R7A-SM-2TC5Z 20-29 years, male 116.5
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 116.2
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 115.8
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 115.0
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 114.9
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 113.5
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 113.5
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 111.9
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 110.2
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 110.0
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 109.6
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 109.5
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 107.3
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 106.3
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 106.1
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 104.5
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 104.4
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 103.0
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 103.0
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 102.5
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 101.8
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 101.4
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 101.0
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 100.7
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 100.2
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 100.1
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 100.0
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 99.4
GTEX-QVJO-0011-R7A-SM-2S1QO 60-69 years, female 99.3
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 99.2
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 98.8
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 98.2
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 98.0
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 98.0
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 97.0
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 97.0
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 96.6
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 96.6
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 96.4
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 96.3
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 96.1
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 96.0
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 95.7
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 95.2
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 94.7
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 93.4
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 93.3
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 91.8
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 91.7
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 91.5
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 91.2
GTEX-N7MS-0011-R7a-SM-2HMKN 60-69 years, male 88.8
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 87.8
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 87.5
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 86.1
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 84.9
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 84.9
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 84.8
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 84.6
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 83.8
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 83.0
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 82.9
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 82.5
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 82.5
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 82.2
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 82.1
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 81.7
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 81.5
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 81.3
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 79.2
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 79.2
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 79.1
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 79.0
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 79.0
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 78.9
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 78.1
GTEX-1IOXB-0011-R7b-SM-CE6SM 50-59 years, male 77.2
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 77.1
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 76.9
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 76.7
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 76.5
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 76.1
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 75.3
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 72.6
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 71.8
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 70.3
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 69.7
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 69.6
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 67.2
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 66.3
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 66.2
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 66.1
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 65.9
GTEX-1J1OQ-0011-R7b-SM-ARU87 40-49 years, female 65.7
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 65.4
GTEX-18464-0011-R7b-SM-731CM 50-59 years, male 64.8
GTEX-RU72-0011-R7A-SM-2TF5U 50-59 years, female 64.0
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 64.0
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 63.4
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 62.1
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 61.9
GTEX-OHPN-0011-R7A-SM-2I5FI 60-69 years, female 61.7
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 61.1
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 60.3
GTEX-TSE9-0011-R7A-SM-3DB7P 60-69 years, female 60.2
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 59.5
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 59.3
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 58.9
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 58.5
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 57.5
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 57.4
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 55.6
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 55.1
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 54.5
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 54.2
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 53.1
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 52.7
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 52.2
GTEX-NPJ8-0011-R7a-SM-2HMJV 40-49 years, male 51.3
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 51.0
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 50.8
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 50.8
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 50.3
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 48.3
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 47.7
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 46.3
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 45.2
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 45.0
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 44.9
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 44.7
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 42.5
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 42.2
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 41.6
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 41.5
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 41.4
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 40.5
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 40.3
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 39.8
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 39.0
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 38.9
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 35.9
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 34.7
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 34.5
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 33.8
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 33.5
GTEX-NL3H-0011-R7a-SM-2I3G5 60-69 years, male 33.2
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 31.8
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 31.5
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 31.0
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 30.0
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 29.4
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 29.0
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 28.6
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 28.6
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 28.5
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 25.9
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 25.5
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 25.1
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 24.1
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 23.5
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 23.5
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 23.4
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 22.9
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 22.7
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 22.3
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 22.2
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 22.2
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 20.8
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 20.5
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 19.4
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 19.0
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 18.7
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 18.1
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 17.2
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 17.1
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 15.4
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 14.2
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 13.7
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 12.2
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BASAL GANGLIA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

169.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 84.7
FF:10164-103B2 76 years, female 84.7
Nucleus accumbens
Scaled Tags Per Million: 169.4
FF:10037-101F1 23-56 years, mixed 169.4
Putamen
Scaled Tags Per Million: 106.9
FF:10176-103C5 60 years, female 106.9
Globus pallidus
Scaled Tags Per Million: 44.9
FF:10161-103A8 76 years, female 49.1
FF:10175-103C4 60 years, female 40.8

BASAL GANGLIA - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

106.8
Pig sample Sample description nTPM
Caudate
nTPM: 105.2
Samples: 4

Max nTPM: 129.8
Min nTPM: 66.4
Sample A Female 66.4
Sample B Female 124.9
Sample C Male 129.8
Sample D Male 99.7
Putamen
nTPM: 106.8
Samples: 4

Max nTPM: 134.3
Min nTPM: 39.8
Sample A Female 39.8
Sample B Female 123.3
Sample C Male 134.3
Sample D Male 129.8
Septum
nTPM: 45.3
Samples: 4

Max nTPM: 62.3
Min nTPM: 26.5
Sample A Female 57.1
Sample B Female 62.3
Sample C Male 26.5
Sample D Male 35.4
Ventral pallidum
nTPM: 66.3
Samples: 4

Max nTPM: 72.8
Min nTPM: 58.2
Sample A Female 63.8
Sample B Female 72.8
Sample C Male 58.2
Sample D Male 70.5

BASAL GANGLIA - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

120.8
Mouse sample Sample description nTPM
Caudate putamen
nTPM: 82.5
Samples: 4

Max nTPM: 96.3
Min nTPM: 65.7
Sample A Male 65.7
Sample B Male 72.2
Sample C Female 96.3
Sample D Female 95.9
Septum
nTPM: 81.9
Samples: 4

Max nTPM: 96.0
Min nTPM: 64.5
Sample A Male 96.0
Sample B Male 83.7
Sample C Female 83.2
Sample D Female 64.5
Ventral forebrain
nTPM: 120.9
Samples: 4

Max nTPM: 129.8
Min nTPM: 99.8
Sample A Male 126.5
Sample B Male 99.8
Sample C Female 127.3
Sample D Female 129.8

BASAL GANGLIA - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

9.7
Allen experiment id Experiment description Expression energy
Striatum
Expression energy: 9.7
69262326 Antisense, RP_050303_02_A08, Mouse strain C57BL/6J (56 days, male) 9.7
Pallidum
Expression energy: 9.0
69262326 Antisense, RP_050303_02_A08, Mouse strain C57BL/6J (56 days, male) 9.0

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