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BRAIN BASAL GANGLIA Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS MEDULLA OBLONGATA
MIDBRAIN OLFACTORY BULB PITUITARY GLAND PONS RETINA SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
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VALIDATION
Brain proteome
Basal ganglia
BASAL GANGLIA - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:48.7 nTPM
HPA Brain:35.0 nTPM
GTEx:48.7 nTPM
FANTOM5:13.5 Scaled Tags Per Million
Pig:4.1 nTPM
Mouse:8.7 nTPM
Allen mouse:2.3 Expression energy

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA028910Antibody HPA073279
Glial cells Not detectedNot detected
Neuronal cells Not detectedNot detected





BASAL GANGLIA - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

35.0
Sample id Sample description nTPM
Caudate nucleus
nTPM: 21.6
2481 Female, age 94, left hemisphere 29.9
1857 Female, age 85, left hemisphere 24.4
2289 Male, age 61, right hemisphere 21.7
1781 Male, age 74, unknown 21.5
1854 Male, age 80, left hemisphere 21.0
2290 Female, age 72, unknown 20.0
2288 Male, age 75, left hemisphere 17.7
2846 Female, age 79, unknown 16.6
Globus pallidus, externus
nTPM: 35.0
2567 Female, age 72, unknown 44.6
1996 Male, age 80, right hemisphere 42.7
2772 Female, age 79, unknown 33.5
2646 Male, age 61, right hemisphere 29.1
2395 Male, age 75, both hemispheres 25.0
Globus pallidus, internus
nTPM: 29.7
2566 Female, age 72, unknown 37.6
2037 Male, age 80, right hemisphere 36.4
2111 Female, age 85, right hemisphere 29.7
2483 Female, age 94, right hemisphere 28.7
1818 Male, age 74, unknown 27.9
2778 Female, age 91, both hemispheres 25.1
2287 Male, age 75, right hemisphere 22.2
Nucleus accumbens
nTPM: 17.8
2391 Female, age 94, left hemisphere 22.7
2698 Female, age 72, unknown 21.1
1806 Female, age 85, left hemisphere 21.0
2732 Male, age 80, right hemisphere 19.6
1783 Male, age 74, unknown 17.4
1856 Female, age 91, right hemisphere 16.0
2286 Male, age 75, left hemisphere 13.4
2824 Male, age 61, right hemisphere 11.5
Nucleus basalis of Meynert
nTPM: 23.9
2569 Male, age 61, both hemispheres 32.1
2484 Female, age 94, left hemisphere 24.6
2393 Male, age 80, right hemisphere 23.0
2821 Male, age 75, both hemispheres 15.9
Nucleus of the diagonal band
nTPM: 13.5
1812 Female, age 91, both hemispheres 18.5
2775 Male, age 80, right hemisphere 13.5
2029 Male, age 61, right hemisphere 12.5
1979 Male, age 74, unknown 12.0
2195 Female, age 85, both hemispheres 11.2
Putamen
nTPM: 21.3
2489 Female, age 72, unknown 29.1
2647 Male, age 75, left hemisphere 25.8
2482 Female, age 94, left hemisphere 25.1
1838 Male, age 80, right hemisphere 18.1
1829 Male, age 74, unknown 17.9
1937 Female, age 91, right hemisphere 17.5
2466 Female, age 79, unknown 15.5
Septal nuclei
nTPM: 16.5
2394 Male, age 61, left hemisphere 28.1
2199 Male, age 80, right hemisphere 19.4
2059 Female, age 85, both hemispheres 17.7
2629 Female, age 94, right hemisphere 15.9
2009 Female, age 91, both hemispheres 12.7
1960 Male, age 74, unknown 11.6
2031 Female, age 72, unknown 10.2
Stria terminalis, bed nucleus
nTPM: 12.3
1974 Female, age 91, both hemispheres 14.4
2201 Male, age 74, unknown 12.6
2486 Female, age 94, both hemispheres 9.9

BASAL GANGLIA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

48.7
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 39.0
Samples: 246

Max nTPM: 191.9
Min nTPM: 6.1
Std nTPM: 22.1
Median nTPM: 34.3
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 191.9
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 157.5
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 141.5
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 91.1
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 89.0
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 89.0
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 82.6
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 81.4
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 79.5
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 78.4
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 77.9
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 77.5
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 77.0
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 74.6
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 73.3
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 73.0
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 72.8
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 72.8
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 72.5
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 70.6
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 68.9
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 68.1
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 67.9
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 67.7
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 64.6
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 64.6
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 63.7
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 62.6
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 60.8
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 60.7
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 59.9
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 59.7
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 59.1
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 59.0
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 58.0
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 58.0
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 57.6
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 57.4
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 57.4
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 56.8
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 56.6
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 56.4
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 55.6
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 54.7
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 54.3
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 53.8
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 53.1
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 52.9
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 52.1
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 51.8
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 51.5
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 51.5
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 50.5
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 49.9
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 49.8
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 48.6
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 47.8
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 47.8
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 47.2
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 47.2
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 46.5
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 45.9
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 45.8
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 45.7
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 45.4
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 45.4
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 44.9
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 44.5
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 44.4
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 44.3
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 44.3
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 44.1
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 43.9
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 43.8
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 43.5
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 42.7
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 42.7
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 42.4
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 42.3
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 42.3
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 42.0
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 41.5
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 41.4
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 41.3
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 41.2
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 41.2
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 41.1
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 40.9
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 40.4
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 40.1
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 39.7
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 39.5
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 39.4
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 39.1
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 39.1
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 38.8
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 38.7
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 38.7
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 38.5
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 38.4
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 38.2
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 38.2
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 38.1
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 38.0
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 37.8
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 37.8
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 37.5
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 37.4
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 37.3
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 36.8
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 36.6
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 36.6
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 36.1
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 35.9
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 35.8
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 35.5
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 35.5
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 35.0
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 35.0
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 34.9
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 34.6
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 34.6
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 34.3
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 34.3
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 34.3
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 34.2
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 33.7
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 33.4
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 33.4
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 33.3
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 33.2
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 33.2
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 33.2
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 33.1
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 32.9
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 32.6
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 32.5
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 32.5
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 32.3
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 31.9
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 31.8
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 31.8
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 31.7
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 31.6
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 31.5
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 31.2
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 30.3
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 30.3
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 30.0
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 29.9
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 29.9
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 29.8
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 29.5
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 29.5
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 29.4
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 29.1
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 29.1
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 29.0
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 28.9
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 28.7
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 28.5
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 28.3
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 28.3
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 28.2
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 28.2
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 27.9
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 27.6
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 27.5
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 27.4
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 27.3
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 27.2
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 27.2
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 27.0
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 26.5
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 26.5
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 25.9
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 25.8
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 25.6
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 25.5
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 25.2
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 25.2
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 25.1
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 24.9
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 24.5
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 24.5
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 24.5
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 24.2
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 24.1
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 24.0
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 24.0
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 23.5
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 23.3
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 23.3
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 23.1
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 23.0
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 22.2
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 22.1
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 21.9
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 21.8
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 21.3
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 21.2
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 21.1
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 21.0
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 20.9
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 20.8
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 20.8
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 20.7
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 20.7
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 20.6
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 20.6
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 20.2
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 20.2
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 20.1
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 20.1
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 20.0
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 19.7
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 19.7
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 19.6
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 19.3
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 19.2
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 19.0
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 18.9
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 18.8
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 18.8
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 18.4
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 18.4
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 18.1
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 17.9
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 17.9
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 17.6
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 17.3
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 17.1
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 17.1
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 15.4
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 14.8
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 14.7
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 14.7
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 14.6
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 14.3
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 14.0
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 13.8
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 13.6
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 12.8
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 12.3
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 7.8
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 6.1
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Brain - Nucleus accumbens (basal ganglia)
Average nTPM: 35.4
Samples: 246

Max nTPM: 204.7
Min nTPM: 9.7
Std nTPM: 23.5
Median nTPM: 28.6
GTEX-1H3VE-0011-R6b-SM-A9G1M 40-49 years, male 204.7
GTEX-14753-0011-R6b-SM-5S2UD 60-69 years, male 154.7
GTEX-1RLM8-0011-R6a-SM-EYYXS 50-59 years, male 114.3
GTEX-1HBPM-0011-R6b-SM-ARU73 60-69 years, female 111.7
GTEX-1CB4H-0011-R6b-SM-CKZNK 60-69 years, female 111.3
GTEX-1LC47-0011-R6b-SM-EZ6MI 60-69 years, male 96.9
GTEX-1R46S-0011-R6a-SM-EZ6N6 60-69 years, female 96.8
GTEX-14PHW-0011-R6b-SM-5YYAR 60-69 years, female 93.6
GTEX-X261-0011-R6B-SM-4E3J8 50-59 years, male 86.2
GTEX-1IGQW-0011-R6a-SM-CM2TC 60-69 years, male 83.5
GTEX-1E2YA-0011-R6b-SM-CE6R2 50-59 years, male 79.6
GTEX-12ZZW-0011-R6a-SM-5DUVZ 50-59 years, male 79.2
GTEX-139TS-0011-R6a-SM-5J2OB 60-69 years, male 78.1
GTEX-11TTK-0011-R6b-SM-DNZZW 60-69 years, female 77.4
GTEX-1H23P-0011-R6b-SM-A9G1H 60-69 years, male 76.8
GTEX-147F4-0011-R6b-SM-5S2UP 50-59 years, male 73.8
GTEX-1LB8K-0011-R6a-SM-EXURT 50-59 years, male 71.8
GTEX-1EH9U-0011-R6a-SM-CJI2C 60-69 years, male 71.6
GTEX-16Z82-0011-R6a-SM-7IGLV 60-69 years, male 68.0
GTEX-11DZ1-0011-R6b-SM-DNZZG 50-59 years, male 65.9
GTEX-13SLW-0011-R6a-SM-5O9BH 70-79 years, male 65.8
GTEX-12584-0011-R6a-SM-5NQ7C 40-49 years, male 64.7
GTEX-ZV68-0011-R6a-SM-51MSR 50-59 years, female 64.7
GTEX-16XZZ-0011-R6a-SM-7IGNE 60-69 years, male 64.1
GTEX-15EO6-0011-R6a-SM-7KULK 50-59 years, male 63.5
GTEX-1H3O1-0011-R6b-SM-CL54U 60-69 years, male 62.4
GTEX-1J8Q2-0011-R6a-SM-CKZPG 60-69 years, male 62.4
GTEX-1A8G6-0011-R6b-SM-7P8PE 60-69 years, male 61.1
GTEX-131XW-0011-R6b-SM-5K7XY 50-59 years, female 59.2
GTEX-1LVAO-0011-R6b-SM-EZ6MX 60-69 years, male 57.0
GTEX-1GMR8-0011-R6b-SM-CE6RC 50-59 years, female 56.8
GTEX-S7PM-0011-R6A-SM-3NM8F 60-69 years, male 55.6
GTEX-1IKOH-0011-R6b-SM-A9G1W 60-69 years, female 54.4
GTEX-145MI-0011-R6a-SM-5PNZA 60-69 years, female 54.3
GTEX-13IVO-0011-R6b-SM-5K7X9 70-79 years, male 53.8
GTEX-1C64N-0011-R6a-SM-7IGO9 50-59 years, male 53.6
GTEX-1I19N-0011-R6b-SM-CY8GC 70-79 years, male 52.2
GTEX-144GO-0011-R6b-SM-5S2V7 60-69 years, male 52.0
GTEX-13PL6-0011-R6a-SM-5O9C5 40-49 years, female 51.8
GTEX-1445S-0011-R6b-SM-5PNUF 60-69 years, male 51.3
GTEX-1EWIQ-0011-R6a-SM-ARU8G 70-79 years, female 51.3
GTEX-11O72-0011-R6a-SM-DNZZQ 40-49 years, male 49.5
GTEX-132Q8-0011-R6a-SM-5K7YN 60-69 years, male 49.2
GTEX-11DYG-0011-R6a-SM-DO936 60-69 years, male 48.9
GTEX-13JVG-0011-R6a-SM-5MR3E 60-69 years, male 48.8
GTEX-1F75B-0011-R6a-SM-ARZMI 50-59 years, male 48.8
GTEX-1HFI6-0011-R6b-SM-CM2SR 40-49 years, male 48.1
GTEX-15G19-0011-R6b-SM-7KUM3 60-69 years, male 47.9
GTEX-1EN7A-0011-R6b-SM-9QEHW 40-49 years, male 47.4
GTEX-1GF9W-0011-R6b-SM-9QEIE 60-69 years, male 46.9
GTEX-1I1HK-0011-R6b-SM-CM2T9 60-69 years, male 46.6
GTEX-ZVT3-0011-R6a-SM-51MSU 60-69 years, female 46.5
GTEX-1F88E-0011-R6a-SM-CKZNW 60-69 years, female 46.3
GTEX-1F48J-0011-R6a-SM-CJI2F 50-59 years, female 46.1
GTEX-1H4P4-0011-R6a-SM-ARZLR 50-59 years, male 45.7
GTEX-13PDP-0011-R6b-SM-5O9D5 60-69 years, male 45.1
GTEX-1GN2E-0011-R6b-SM-9QEII 60-69 years, male 44.7
GTEX-ZF28-0011-R6a-SM-4WKHI 60-69 years, male 44.0
GTEX-1LH75-0011-R6a-SM-EXURS 50-59 years, female 43.3
GTEX-ZE9C-0011-R6a-SM-4WWCW 60-69 years, male 42.7
GTEX-1JJEA-0011-R6a-SM-EXUS1 60-69 years, male 42.4
GTEX-1N2DW-0011-R6a-SM-EZ6MW 50-59 years, male 42.4
GTEX-1GN1U-0011-R6a-SM-CKZNO 50-59 years, female 42.2
GTEX-1BAJH-0011-R6b-SM-7MXT2 70-79 years, male 42.0
GTEX-1LVA9-0011-R6a-SM-EYYWH 50-59 years, male 41.9
GTEX-12WSF-0011-R6b-SM-5HL8W 70-79 years, male 41.7
GTEX-1HUB1-0011-R6b-SM-ARU6W 60-69 years, male 41.3
GTEX-13NYS-0011-R6b-SM-5MR3R 60-69 years, male 40.9
GTEX-1H1ZS-0011-R6b-SM-A9G1F 70-79 years, male 40.0
GTEX-13OW8-0011-R6b-SM-5L3I3 60-69 years, male 39.9
GTEX-13OVH-0011-R6b-SM-5LUAX 70-79 years, male 39.7
GTEX-YFC4-0011-R6b-SM-4V6E1 40-49 years, female 39.0
GTEX-1CB4J-0011-R6b-SM-9WG7B 60-69 years, male 38.9
GTEX-QVUS-0011-R6A-SM-3GACX 60-69 years, female 38.7
GTEX-1HR9M-0011-R6a-SM-ARU6Z 60-69 years, male 37.7
GTEX-11PRG-0011-R6b-SM-DO923 50-59 years, male 37.4
GTEX-13N1W-0011-R6a-SM-5MR43 70-79 years, male 37.3
GTEX-13OW5-0011-R6b-SM-5O9BW 60-69 years, male 37.2
GTEX-P44H-0011-R6A-SM-2XCF3 40-49 years, male 37.2
GTEX-13N2G-0011-R6b-SM-5MR3P 60-69 years, male 37.0
GTEX-11GSP-0011-R6b-SM-57WBQ 60-69 years, female 36.9
GTEX-14PQA-0011-R6b-SM-6AJAM 50-59 years, female 36.8
GTEX-13FHO-0011-R6b-SM-5LZX1 60-69 years, male 36.4
GTEX-X585-0011-R6A-SM-46MVJ 50-59 years, male 36.1
GTEX-1192X-0011-R6a-SM-DNZZB 50-59 years, male 36.0
GTEX-ZE7O-0011-R6a-SM-57WCI 50-59 years, female 35.8
GTEX-17JCI-0011-R6a-SM-72D6D 60-69 years, female 35.7
GTEX-1I1GS-0011-R6b-SM-CMKHE 60-69 years, male 35.7
GTEX-PWO3-0011-R6A-SM-2I5F3 60-69 years, female 35.5
GTEX-13OVJ-0011-R6b-SM-5L3GH 50-59 years, female 35.4
GTEX-ZAB4-0011-R6a-SM-4SOKD 40-49 years, male 35.3
GTEX-14LZ3-0011-R6a-SM-D3L8C 60-69 years, female 34.8
GTEX-YJ89-0011-R6a-SM-4V6GN 60-69 years, male 34.7
GTEX-17EVQ-0011-R6a-SM-7189U 70-79 years, male 34.4
GTEX-1HGF4-0011-R6a-SM-A96S1 60-69 years, male 34.0
GTEX-14C5O-0011-R6a-SM-5YYB6 60-69 years, male 33.7
GTEX-X4XY-0011-R6B-SM-46MVB 60-69 years, male 33.4
GTEX-XMD1-0011-R6A-SM-4AT5K 60-69 years, male 33.1
GTEX-1EKGG-0011-R6a-SM-CL538 60-69 years, male 33.1
GTEX-1GZ2Q-0011-R6a-SM-9OSWM 40-49 years, male 33.1
GTEX-145LU-0011-R6a-SM-5S2V6 50-59 years, male 32.6
GTEX-18465-0011-R6a-SM-7LG6M 50-59 years, male 32.6
GTEX-RU72-0011-R6A-SM-2TF71 50-59 years, female 32.4
GTEX-11WQC-0011-R6a-SM-5BC77 60-69 years, male 32.2
GTEX-OHPN-0011-R6A-SM-2I5FH 60-69 years, female 31.9
GTEX-1IL2U-0011-R6a-SM-ARZLG 60-69 years, male 30.9
GTEX-18A6Q-0011-R6a-SM-7LG6R 60-69 years, male 30.7
GTEX-11DXW-0011-R6a-SM-DO11N 40-49 years, male 30.4
GTEX-X4EP-0011-R6A-SM-3P629 60-69 years, female 30.3
GTEX-ZUA1-0011-R6b-SM-4YCDD 40-49 years, male 30.1
GTEX-12WSM-0011-R6b-SM-5EQ6N 60-69 years, male 29.9
GTEX-1E1VI-0011-R6a-SM-9OSVJ 50-59 years, male 29.8
GTEX-1GMRU-0011-R6b-SM-A9G3B 50-59 years, male 29.8
GTEX-1GTWX-0011-R6a-SM-A96RN 60-69 years, male 29.8
GTEX-15RJE-0011-R6a-SM-7DHL8 40-49 years, male 29.7
GTEX-X4XX-0011-R6B-SM-46MWP 60-69 years, male 29.7
GTEX-ZXG5-0011-R6a-SM-57WBZ 60-69 years, male 29.7
GTEX-1H3NZ-0011-R6b-SM-A9G1N 60-69 years, male 29.6
GTEX-1IY9M-0011-R6a-SM-D4P28 60-69 years, male 29.4
GTEX-13FHP-0011-R6b-SM-5LZY6 50-59 years, male 29.0
GTEX-14E7W-0011-R6b-SM-5ZZV3 70-79 years, male 28.9
GTEX-11NV4-0011-R6a-SM-57WD5 60-69 years, male 28.7
GTEX-12ZZZ-0011-R6b-SM-5EQ5B 60-69 years, male 28.6
GTEX-14BIM-0011-R6b-SM-5S2VB 60-69 years, female 28.6
GTEX-NPJ7-0011-R6a-SM-2I3G7 60-69 years, female 28.6
GTEX-N7MT-0011-R6a-SM-2I3G3 60-69 years, female 28.3
GTEX-1A3MX-0011-R6a-SM-7P8S9 60-69 years, male 28.1
GTEX-1J1OQ-0011-R6a-SM-ARU86 40-49 years, female 28.0
GTEX-14PN4-0011-R6b-SM-69LQU 50-59 years, male 27.8
GTEX-1C6WA-0011-R6a-SM-7PBYP 60-69 years, male 27.7
GTEX-12WSH-0011-R6b-SM-5P9F4 50-59 years, male 27.6
GTEX-1ICLZ-0011-R6b-SM-A9G3A 60-69 years, male 27.6
GTEX-11ONC-0011-R6a-SM-DO12A 60-69 years, male 27.5
GTEX-13FLV-0011-R6a-SM-5KLZ4 50-59 years, male 27.2
GTEX-13G51-0011-R6b-SM-5LZX4 60-69 years, male 27.2
GTEX-1I1GQ-0011-R6b-SM-CE6SE 50-59 years, male 27.2
GTEX-12WSE-0011-R6b-SM-5LZV5 20-29 years, male 27.1
GTEX-1GZHY-0011-R6a-SM-9OSWL 50-59 years, female 27.0
GTEX-UTHO-0011-R6A-SM-3GIJW 60-69 years, male 26.8
GTEX-17F97-0011-R6a-SM-7EPGS 50-59 years, male 26.7
GTEX-11NUK-0011-R6a-SM-DO93O 50-59 years, male 26.7
GTEX-13QJC-0011-R6a-SM-5S2VI 60-69 years, female 26.6
GTEX-183WM-0011-R6b-SM-72D66 70-79 years, female 26.4
GTEX-1MA7X-0011-R6a-SM-EYYWR 60-69 years, male 26.3
GTEX-147GR-0011-R6b-SM-5S2RO 60-69 years, male 26.1
GTEX-17MF6-0011-R6b-SM-7LG6G 40-49 years, male 26.0
GTEX-1MJK2-0011-R6a-SM-EXUS3 50-59 years, male 25.4
GTEX-ZDXO-0011-R6a-SM-4WWCT 60-69 years, male 25.2
GTEX-1H1DG-0011-R6a-SM-A9SK8 70-79 years, male 25.1
GTEX-1GF9V-0011-R6b-SM-CJI2Q 60-69 years, male 25.0
GTEX-Y8DK-0011-R6A-SM-4V6EG 60-69 years, male 24.9
GTEX-13O3O-0011-R6b-SM-5P9GY 60-69 years, female 24.8
GTEX-QDT8-0011-R6A-SM-32PKI 30-39 years, female 24.8
GTEX-P44G-0011-R6A-SM-2XCD3 30-39 years, male 24.2
GTEX-1IKK5-0011-R6b-SM-A9SLY 60-69 years, male 24.1
GTEX-WWYW-0011-R6A-SM-3NB3G 50-59 years, female 24.0
GTEX-1GZ4I-0011-R6b-SM-9WG77 50-59 years, male 23.6
GTEX-1I1GR-0011-R6a-SM-CMKHI 60-69 years, male 23.5
GTEX-13JUV-0011-R6b-SM-5LZYG 40-49 years, female 23.3
GTEX-13S7M-0011-R6b-SM-5O9D8 60-69 years, female 23.3
GTEX-WHSE-0011-R6A-SM-3P5ZP 20-29 years, male 23.3
GTEX-1C6VR-0011-R6a-SM-7MXU8 60-69 years, male 23.1
GTEX-1AX9I-0011-R6a-SM-7P8PK 60-69 years, male 22.9
GTEX-11OF3-0011-R6b-SM-57WBG 60-69 years, male 22.7
GTEX-NPJ8-0011-R6a-SM-2HMKB 40-49 years, male 22.7
GTEX-1IDJH-0011-R6a-SM-A9SLZ 70-79 years, male 22.6
GTEX-15DYW-0011-R6b-SM-6PALA 60-69 years, female 22.5
GTEX-TSE9-0011-R6A-SM-3DB7L 60-69 years, female 22.5
GTEX-WVLH-0011-R6A-SM-3MJFZ 50-59 years, male 22.0
GTEX-1F75A-0011-R6b-SM-9QEHD 50-59 years, male 21.9
GTEX-139TT-0011-R6b-SM-5J2ON 60-69 years, male 21.8
GTEX-14ASI-0011-R6a-SM-5S2UZ 60-69 years, male 21.8
GTEX-1F6I4-0011-R6a-SM-CE6R4 60-69 years, male 21.7
GTEX-145MH-0011-R6a-SM-5PNZ7 50-59 years, male 21.6
GTEX-13NYB-0011-R6b-SM-5MR51 40-49 years, male 21.5
GTEX-1CB4G-0011-R6b-SM-9QEGO 60-69 years, male 21.5
GTEX-11DXY-0011-R6a-SM-DNZZF 60-69 years, male 21.4
GTEX-NL3H-0011-R6a-SM-2I3G8 60-69 years, male 21.3
GTEX-1H1CY-0011-R6b-SM-CE6RP 60-69 years, female 21.2
GTEX-1HBPH-0011-R6a-SM-CKZOV 40-49 years, female 21.0
GTEX-13112-0011-R6b-SM-5DUVK 50-59 years, male 20.9
GTEX-NL4W-0011-R6a-SM-2I3GA 50-59 years, male 20.7
GTEX-S7SE-0011-R6A-SM-2XCD9 50-59 years, male 20.7
GTEX-1I1CD-0011-R6b-SM-CJI3Y 60-69 years, female 20.7
GTEX-17HHY-0011-R6b-SM-7189Z 50-59 years, male 20.5
GTEX-1EX96-0011-R6a-SM-9OSVV 50-59 years, male 20.5
GTEX-1B996-0011-R6b-SM-793AQ 60-69 years, male 20.4
GTEX-1HBPI-0011-R6b-SM-A9G1T 50-59 years, male 20.3
GTEX-12ZZY-0011-R6b-SM-5EGLA 60-69 years, male 20.2
GTEX-13O3Q-0011-R6a-SM-5KM2V 50-59 years, male 20.1
GTEX-WL46-0011-R6A-SM-3LK6X 50-59 years, male 20.1
GTEX-1399T-0011-R6b-SM-5K7YL 60-69 years, male 19.9
GTEX-WZTO-0011-R6B-SM-4E3J6 40-49 years, male 19.9
GTEX-15CHQ-0011-R6b-SM-69LOX 60-69 years, male 19.5
GTEX-1HT8W-0011-R6a-SM-CM2SY 30-39 years, male 19.5
GTEX-13X6K-0011-R6a-SM-5P9K6 60-69 years, female 19.3
GTEX-Q2AG-0011-R6A-SM-2HML7 40-49 years, female 19.3
GTEX-1HB9E-0011-R6b-SM-A9G1P 50-59 years, male 19.0
GTEX-R55E-0011-R6A-SM-2TC5T 20-29 years, male 18.9
GTEX-Z93S-0011-R6b-SM-4RGNJ 50-59 years, male 18.9
GTEX-17HG3-0011-R6b-SM-79OK8 30-39 years, female 18.8
GTEX-1EMGI-0011-R6a-SM-9OSVR 60-69 years, male 18.7
GTEX-13SLX-0011-R6a-SM-5PNX4 50-59 years, female 18.5
GTEX-18464-0011-R6a-SM-731CA 50-59 years, male 18.4
GTEX-ZVZQ-0011-R6b-SM-57WAY 60-69 years, female 18.4
GTEX-QMR6-0011-R6A-SM-32PKP 50-59 years, male 18.3
GTEX-1B8SF-0011-R6b-SM-7MXUD 60-69 years, male 18.3
GTEX-1I1GV-0011-R6b-SM-ARU6Q 60-69 years, male 18.1
GTEX-T5JC-0011-R6A-SM-D3L87 20-29 years, male 18.0
GTEX-13X6J-0011-R6a-SM-5PNUB 50-59 years, male 17.8
GTEX-15DCD-0011-R6b-SM-6M46L 70-79 years, female 17.7
GTEX-12WSC-0011-R6b-SM-5LU99 50-59 years, male 17.5
GTEX-14JG1-0011-R6b-SM-5YYAU 40-49 years, male 17.5
GTEX-145LS-0011-R6b-SM-5PNWL 60-69 years, female 17.4
GTEX-13FXS-0011-R6b-SM-5L3F7 50-59 years, male 17.2
GTEX-1OJC4-0011-R6a-SM-EXOIM 50-59 years, female 17.0
GTEX-144GL-0011-R6a-SM-5P9HW 50-59 years, male 16.6
GTEX-N7MS-0011-R6a-SM-2HMJ4 60-69 years, male 16.5
GTEX-13OW6-0011-R6b-SM-5L3GR 50-59 years, male 16.4
GTEX-12ZZX-0011-R6a-SM-5HL8L 40-49 years, female 16.2
GTEX-1GN73-0011-R6b-SM-CJI2T 60-69 years, male 16.1
GTEX-1F6IF-0011-R6a-SM-9QEIO 60-69 years, male 16.0
GTEX-QVJO-0011-R6A-SM-2S1QN 60-69 years, female 15.8
GTEX-13RTJ-0011-R6a-SM-5SI74 60-69 years, male 15.6
GTEX-1F7RK-0011-R6b-SM-ARZMG 20-29 years, female 15.6
GTEX-13OVL-0011-R6a-SM-5L3G4 50-59 years, male 15.3
GTEX-1JMLX-0011-R6b-SM-EXUT9 50-59 years, male 15.0
GTEX-14JIY-0011-R6b-SM-68714 60-69 years, male 14.9
GTEX-T2IS-0011-R6A-SM-32QP2 20-29 years, female 14.9
GTEX-T6MN-0011-R6A-SM-32QP8 50-59 years, male 14.9
GTEX-1B933-0011-R6b-SM-79OOQ 50-59 years, female 14.5
GTEX-14BIN-0011-R6a-SM-5S2RH 50-59 years, female 14.4
GTEX-14BMV-0011-R6b-SM-5YY9I 50-59 years, male 14.3
GTEX-1F75W-0011-R6a-SM-9QEI5 60-69 years, male 14.3
GTEX-13VXU-0011-R6a-SM-5SI71 50-59 years, male 13.9
GTEX-1313W-0011-R6a-SM-5K7XO 50-59 years, female 13.7
GTEX-15ER7-0011-R6a-SM-6M46M 20-29 years, female 13.3
GTEX-13FLW-0011-R6b-SM-5L3EN 50-59 years, male 12.4
GTEX-17EVP-0011-R6b-SM-7LT99 40-49 years, male 12.3
GTEX-1B8L1-0011-R6b-SM-7P8SU 60-69 years, male 12.2
GTEX-14ABY-0011-R6a-SM-5PNWR 50-59 years, male 12.0
GTEX-14PJM-0011-R6a-SM-6872G 50-59 years, female 11.9
GTEX-12WSD-0011-R6b-SM-5P9JU 60-69 years, female 11.3
GTEX-131XH-0011-R6a-SM-5KM2G 50-59 years, male 11.2
GTEX-XLM4-0011-R6A-SM-4AT4B 60-69 years, male 10.9
GTEX-16YQH-0011-R6b-SM-7938T 30-39 years, male 9.7
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Brain - Putamen (basal ganglia)
Average nTPM: 48.7
Samples: 205

Max nTPM: 186.5
Min nTPM: 10.6
Std nTPM: 26.3
Median nTPM: 41.7
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 186.5
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 149.0
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 140.3
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 123.5
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 113.3
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 112.0
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 109.4
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 106.1
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 98.6
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 97.3
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 96.8
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 92.0
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 91.0
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 90.6
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 90.1
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 89.7
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 89.0
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 88.8
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 88.6
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 85.4
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 85.2
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 84.3
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 84.2
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 83.9
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 79.4
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 78.4
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 75.0
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 73.7
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 73.2
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 73.2
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 73.1
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 72.2
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 71.9
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 71.9
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 71.6
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 70.9
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 70.6
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 69.8
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 66.2
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 66.1
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 65.6
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 65.6
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 65.4
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 65.1
GTEX-NL3H-0011-R7a-SM-2I3G5 60-69 years, male 64.8
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 64.1
GTEX-NPJ8-0011-R7a-SM-2HMJV 40-49 years, male 63.6
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 63.5
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 63.2
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 63.1
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 63.0
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 62.6
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 62.3
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 62.1
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 61.7
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 60.6
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 60.3
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 59.8
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 58.9
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 58.8
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 58.2
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 58.0
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 57.7
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 55.8
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 55.5
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 55.4
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 54.8
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 54.8
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 54.1
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 53.9
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 53.1
GTEX-P44G-0011-R7A-SM-2I3F9 30-39 years, male 52.1
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 51.7
GTEX-RU72-0011-R7A-SM-2TF5U 50-59 years, female 51.3
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 51.3
GTEX-18464-0011-R7b-SM-731CM 50-59 years, male 50.5
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 50.1
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 49.5
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 48.8
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 48.1
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 47.5
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 47.1
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 47.0
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 46.9
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 46.2
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 45.6
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 45.4
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 45.1
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 44.3
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 44.1
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 43.6
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 43.5
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 42.7
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 42.7
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 42.4
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 42.4
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 42.3
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 42.3
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 42.3
GTEX-N7MS-0011-R7a-SM-2HMKN 60-69 years, male 42.2
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 42.2
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 41.8
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 41.7
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 41.7
GTEX-TSE9-0011-R7A-SM-3DB7P 60-69 years, female 41.6
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 41.6
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 41.4
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 40.9
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 40.3
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 40.1
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 39.8
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 39.5
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 39.2
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 39.1
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 38.9
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 38.9
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 38.7
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 38.6
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 38.5
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 38.1
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 37.8
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 36.7
GTEX-OHPN-0011-R7A-SM-2I5FI 60-69 years, female 36.6
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 36.4
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 36.3
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 36.2
GTEX-1IOXB-0011-R7b-SM-CE6SM 50-59 years, male 36.2
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 36.1
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 36.1
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 36.0
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 35.9
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 35.9
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 35.5
GTEX-1J1OQ-0011-R7b-SM-ARU87 40-49 years, female 35.1
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 35.0
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 34.8
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 34.4
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 34.3
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 34.0
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 33.8
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 32.9
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 32.8
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 32.7
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 32.5
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 32.4
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 32.2
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 31.3
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 30.8
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 30.6
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 30.3
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 30.2
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 29.9
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 29.7
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 29.4
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 29.4
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 29.2
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 29.0
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 28.9
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 28.7
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 28.6
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 28.2
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 28.0
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 27.8
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 27.8
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 26.8
GTEX-S7SE-0011-R7A-SM-2XCDI 50-59 years, male 26.8
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 26.4
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 26.3
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 26.2
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 26.2
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 25.8
GTEX-R55E-0011-R7A-SM-2TC5Z 20-29 years, male 25.5
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 25.4
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 25.0
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 24.7
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 24.6
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 24.6
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 24.5
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 24.4
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 24.3
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 24.2
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 24.1
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 23.6
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 23.4
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 23.3
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 23.1
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 22.8
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 22.8
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 22.5
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 22.0
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 21.5
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 20.7
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 20.2
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 20.1
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 19.7
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 19.3
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 19.3
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 19.3
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 18.2
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 18.1
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 17.6
GTEX-QVJO-0011-R7A-SM-2S1QO 60-69 years, female 14.9
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 14.8
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 13.6
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 10.6
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BASAL GANGLIA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

13.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 13.1
FF:10164-103B2 76 years, female 13.1
Nucleus accumbens
Scaled Tags Per Million: 3.3
FF:10037-101F1 23-56 years, mixed 3.3
Putamen
Scaled Tags Per Million: 8.5
FF:10176-103C5 60 years, female 8.5
Globus pallidus
Scaled Tags Per Million: 13.5
FF:10161-103A8 76 years, female 15.2
FF:10175-103C4 60 years, female 11.7

BASAL GANGLIA - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

4.1
Pig sample Sample description nTPM
Caudate
nTPM: 2.9
Samples: 4

Max nTPM: 3.4
Min nTPM: 2.2
Sample A Female 2.2
Sample B Female 3.4
Sample C Male 3.3
Sample D Male 2.7
Putamen
nTPM: 4.1
Samples: 4

Max nTPM: 6.1
Min nTPM: 2.5
Sample A Female 6.1
Sample B Female 2.5
Sample C Male 3.5
Sample D Male 4.3
Septum
nTPM: 2.9
Samples: 4

Max nTPM: 3.1
Min nTPM: 2.7
Sample A Female 2.7
Sample B Female 2.9
Sample C Male 2.8
Sample D Male 3.1
Ventral pallidum
nTPM: 3.4
Samples: 4

Max nTPM: 4.9
Min nTPM: 1.9
Sample A Female 1.9
Sample B Female 3.1
Sample C Male 4.9
Sample D Male 3.7

BASAL GANGLIA - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

8.7
Mouse sample Sample description nTPM
Caudate putamen
nTPM: 7.2
Samples: 4

Max nTPM: 8.0
Min nTPM: 5.6
Sample A Male 7.9
Sample B Male 8.0
Sample C Female 5.6
Sample D Female 7.3
Septum
nTPM: 8.7
Samples: 4

Max nTPM: 9.8
Min nTPM: 8.0
Sample A Male 8.0
Sample B Male 8.8
Sample C Female 9.8
Sample D Female 8.0
Ventral forebrain
nTPM: 7.7
Samples: 4

Max nTPM: 9.5
Min nTPM: 6.1
Sample A Male 6.1
Sample B Male 8.5
Sample C Female 9.5
Sample D Female 6.6

BASAL GANGLIA - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

2.3
Allen experiment id Experiment description Expression energy
Striatum
Expression energy: 2.3
68443363 Antisense, RP_050111_01_H02, Mouse strain C57BL/6J (56 days, male) 2.3
Pallidum
Expression energy: 1.9
68443363 Antisense, RP_050111_01_H02, Mouse strain C57BL/6J (56 days, male) 1.9

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