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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA Brain:
835.3
nTPM
FANTOM5:
769.1
Scaled Tags Per Million
Pig:
237.6
nTPM
Allen mouse:
14.3
Expression energy
PONS - HPA Brain RNA-seq
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
835.3
Sample id
Sample description
nTPM
Anterior cochlear nucleus, ventral nTPM: 495.3
2188
Female, age 91, both hemispheres
611.0
2090
Male, age 80, both hemispheres
602.5
1984
Male, age 76, both hemispheres
397.9
2301
Female, age 85, both hemispheres
369.8
Dorsal cochlear nucleus nTPM: 735.7
2802
Male, age 74, right hemisphere
880.1
2378
Male, age 80, both hemispheres
833.2
2370
Male, age 61, both hemispheres
737.4
2058
Male, age 76, both hemispheres
691.0
2187
Female, age 91, both hemispheres
536.6
Dorsal tegmental nucleus nTPM: 562.3
2083
Male, age 80, both hemispheres
817.6
2326
Male, age 74, both hemispheres
613.0
1936
Male, age 76, left hemisphere
429.2
2358
Male, age 61, both hemispheres
389.4
Dorsolateral tegmental area nTPM: 522.7
2654
Male, age 80, both hemispheres
732.1
2751
Female, age 85, both hemispheres
702.9
2360
Male, age 74, both hemispheres
431.4
2337
Male, age 61, both hemispheres
406.7
2141
Male, age 76, both hemispheres
340.5
Kolliker-Fuse nucleus nTPM: 583.8
2793
Female, age 91, left hemisphere
850.0
2163
Male, age 80, both hemispheres
590.1
2315
Male, age 76, right hemisphere
311.2
Lateral lemniscal nuclei nTPM: 682.2
2453
Male, age 74, right hemisphere
832.0
2320
Female, age 91, left hemisphere
726.4
2169
Male, age 76, both hemispheres
671.9
2036
Male, age 80, both hemispheres
625.0
2746
Female, age 85, left hemisphere
555.7
Lateral parabrachial nucleus nTPM: 653.4
2013
Male, age 80, both hemispheres
730.6
2792
Male, age 76, both hemispheres
670.0
2790
Male, age 61, both hemispheres
637.2
2139
Female, age 85, right hemisphere
575.9
Lateral vestibular nucleus nTPM: 528.8
2184
Male, age 76, both hemispheres
570.7
2311
Male, age 80, both hemispheres
486.9
Locus coeruleus nTPM: 441.5
2162
Male, age 80, both hemispheres
486.5
2317
Female, age 72, unknown
477.2
2014
Male, age 55, unknown
472.2
2720
Male, age 74, both hemispheres
457.9
2123
Female, age 91, both hemispheres
438.4
1980
Male, age 76, both hemispheres
382.9
2788
Male, age 74, unknown
375.6
Medial parabrachial nucleus nTPM: 554.0
2463
Female, age 85, right hemisphere
665.5
2854
Male, age 80, both hemispheres
559.9
2156
Male, age 61, both hemispheres
538.7
2786
Male, age 76, both hemispheres
521.3
2170
Female, age 91, both hemispheres
484.4
Medial periolivary nuclei nTPM: 667.7
2458
Female, age 91, both hemispheres
834.7
2081
Male, age 80, both hemispheres
706.8
2063
Male, age 76, both hemispheres
700.2
2171
Female, age 85, both hemispheres
568.8
2791
Male, age 74, right hemisphere
528.0
Motor facial nucleus nTPM: 744.1
2795
Female, age 91, both hemispheres
917.5
2126
Male, age 61, both hemispheres
789.7
2327
Male, age 80, both hemispheres
704.3
2062
Male, age 76, both hemispheres
702.7
2365
Male, age 74, right hemisphere
694.7
2697
Female, age 85, both hemispheres
655.6
Motor trigeminal nucleus nTPM: 624.8
2560
Male, age 74, both hemispheres
796.3
2321
Female, age 91, both hemispheres
656.6
2079
Male, age 80, both hemispheres
619.7
2309
Male, age 76, both hemispheres
553.2
2335
Male, age 61, both hemispheres
498.1
Nuclei of the trapezoid body nTPM: 700.6
2368
Female, age 91, both hemispheres
900.7
1983
Male, age 76, both hemispheres
721.0
2166
Male, age 80, both hemispheres
698.6
2159
Male, age 61, both hemispheres
663.9
2735
Female, age 85, both hemispheres
518.9
Nucleus raphe magnus nTPM: 774.5
2459
Female, age 91, both hemispheres
1262.9
2328
Male, age 80, both hemispheres
805.5
2051
Male, age 76, both hemispheres
787.1
2160
Male, age 61, both hemispheres
636.6
2172
Female, age 85, both hemispheres
586.9
2455
Male, age 74, both hemispheres
567.9
Paramedian reticular nucleus nTPM: 652.7
2050
Female, age 85, both hemispheres
756.4
2057
Male, age 80, both hemispheres
707.8
2313
Male, age 61, both hemispheres
624.5
2052
Male, age 76, both hemispheres
522.0
Pedunculopontine tegmental nucleus nTPM: 495.3
2334
Male, age 80, both hemispheres
621.0
1921
Female, age 85, both hemispheres
481.8
2338
Male, age 61, both hemispheres
383.2
Pontine nuclei nTPM: 734.1
2454
Male, age 74, left hemisphere
864.7
2727
Male, age 61, right hemisphere
845.3
1863
Male, age 55, unknown
799.3
1968
Male, age 76, left hemisphere
780.2
2787
Female, age 85, both hemispheres
761.9
2109
Female, age 72, unknown
616.6
2115
Male, age 80, left hemisphere
606.5
2319
Female, age 91, both hemispheres
597.9
Pontine raphe nucleus nTPM: 577.2
2122
Female, age 85, midline
660.5
2853
Male, age 76, midline
493.8
Posteroventral cochlear nucleus nTPM: 656.6
2371
Male, age 61, both hemispheres
755.6
2341
Male, age 80, both hemispheres
714.5
2070
Male, age 76, both hemispheres
671.2
2752
Female, age 85, both hemispheres
651.6
2135
Female, age 91, both hemispheres
490.3
Principal sensory trigeminal nucleus nTPM: 570.6
2367
Female, age 91, left hemisphere
702.7
2158
Male, age 61, both hemispheres
559.1
2008
Male, age 80, left hemisphere
546.4
2324
Male, age 76, both hemispheres
474.0
Reticular pontine nucleus, caudal nTPM: 835.3
2457
Female, age 91, both hemispheres
1180.5
2092
Male, age 76, both hemispheres
748.4
2559
Male, age 74, both hemispheres
714.8
2332
Male, age 80, right hemisphere
697.5
Reticular pontine nucleus, oral nTPM: 728.5
2361
Male, age 74, both hemispheres
883.7
1939
Male, age 80, both hemispheres
752.3
2012
Female, age 85, both hemispheres
682.7
2366
Female, age 91, both hemispheres
679.5
2167
Male, age 76, both hemispheres
644.5
Reticulotegmental nucleus nTPM: 797.0
2322
Female, age 91, both hemispheres
1083.0
2452
Male, age 74, both hemispheres
884.7
2333
Male, age 80, both hemispheres
811.3
2325
Male, age 76, both hemispheres
408.9
Spinal trigeminal nucleus, oral nTPM: 625.4
2164
Male, age 80, both hemispheres
740.3
1978
Male, age 76, both hemispheres
600.8
2737
Female, age 85, both hemispheres
535.1
Subcoeruleus area nTPM: 596.9
2369
Female, age 85, left hemisphere
826.9
2451
Male, age 74, both hemispheres
597.7
1958
Male, age 80, both hemispheres
529.0
2089
Male, age 76, left hemisphere
527.0
2323
Female, age 91, left hemisphere
503.7
Superior olive nTPM: 684.9
2020
Male, age 76, both hemispheres
774.1
2561
Female, age 91, both hemispheres
765.1
2329
Male, age 80, right hemisphere
691.7
1875
Female, age 85, both hemispheres
649.1
2364
Male, age 74, right hemisphere
544.7
Ventral periolivary nuclei nTPM: 587.3
2023
Male, age 76, both hemispheres
720.2
2165
Male, age 80, both hemispheres
682.0
2794
Female, age 91, left hemisphere
535.4
2130
Female, age 85, both hemispheres
411.6
Ventrolateral tegmental area, A5 NE cell group nTPM: 743.9
2456
Female, age 91, both hemispheres
1190.4
2449
Male, age 74, both hemispheres
713.6
2840
Female, age 85, both hemispheres
709.8
2161
Male, age 80, both hemispheres
701.2
1959
Male, age 76, both hemispheres
629.7
2359
Male, age 61, both hemispheres
518.4
PONS - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Max subtype Scaled Tags Per Millioni
Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
237.6
Pig sample
Sample description
nTPM
Pons nTPM: 237.7
Samples: 4
Max nTPM: 307.0
Min nTPM: 180.3
Sample A
Female
187.8
Sample B
Female
180.3
Sample C
Male
307.0
Sample D
Male
275.5
PONS - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.
Max subtype Expression energyi
Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.
The Human Protein Atlas project is funded
