HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Medium
Neuronal cells: High
RNA expressioni
Consensus:805.1 nTPM
HPA Brain:1545.7 nTPM
GTEx:805.1 nTPM
FANTOM5:1071.5 Scaled Tags Per Million
Pig:1840.3 nTPM
Mouse:643.7 nTPM
Allen mouse:32.2 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA038171Antibody CAB006908
Glial cells MediumNot detected
Neuronal cells HighMedium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 1545.7
Sample id Sample description nTPM
Hippocampus
nTPM: 727.6
1898 Male, age 80, left hemisphere 981.9
2621 Female, age 67, right hemisphere 860.6
2148 Female, age 91, left hemisphere 823.5
1855 Male, age 76, left hemisphere 772.8
1911 Female, age 85, right hemisphere 480.6
2529 Female, age 94, left hemisphere 446.0
Dentate gyrus
nTPM: 673.9
2531 Female, age 67, both hemispheres 915.1
1927 Female, age 91, both hemispheres 858.3
2246 Female, age 85, both hemispheres 706.9
2528 Male, age 74, both hemispheres 587.3
2530 Female, age 94, left hemisphere 536.5
2010 Male, age 76, both hemispheres 439.2
Entorhinal gyrus
nTPM: 1247.6
2613 Female, age 94, left hemisphere 1939.1
2764 Male, age 80, right hemisphere 1464.1
1938 Female, age 85, left hemisphere 1332.0
2686 Male, age 75, right hemisphere 1262.8
1787 Male, age 76, left hemisphere 1029.1
2117 Female, age 91, right hemisphere 458.6
Hippocampus, CA1
nTPM: 799.3
2749 Male, age 80, left hemisphere 1247.5
2045 Male, age 76, both hemispheres 933.3
2527 Male, age 74, both hemispheres 723.7
2082 Female, age 91, right hemisphere 553.0
1873 Female, age 85, both hemispheres 538.9
Hippocampus, CA2
nTPM: 781.1
1940 Female, age 85, left hemisphere 1101.1
1892 Male, age 76, both hemispheres 946.2
2437 Female, age 94, left hemisphere 895.6
2113 Female, age 91, right hemisphere 670.3
2249 Male, age 74, both hemispheres 589.1
1963 Male, age 80, left hemisphere 484.5
Hippocampus, CA3
nTPM: 909.5
2620 Female, age 94, left hemisphere 1385.4
2861 Female, age 67, both hemispheres 1123.3
2137 Male, age 80, left hemisphere 1022.2
1867 Male, age 76, both hemispheres 755.4
2436 Male, age 74, both hemispheres 614.1
1891 Female, age 85, both hemispheres 556.8
Parahippocampal cortex
nTPM: 1253.0
2622 Female, age 67, right hemisphere 1774.5
1850 Male, age 80, both hemispheres 1733.5
2532 Female, age 72, left hemisphere 1647.5
2693 Female, age 94, both hemispheres 1379.2
1933 Female, age 85, both hemispheres 1281.2
2245 Female, age 91, both hemispheres 1258.9
2692 Male, age 74, both hemispheres 945.1
2250 Female, age 67, right hemisphere 889.1
1990 Female, age 91, right hemisphere 833.8
2018 Male, age 76, both hemispheres 787.5
Perirhinal gyrus
nTPM: 1545.7
1794 Male, age 80, right hemisphere 2009.1
1841 Female, age 85, right hemisphere 1797.5
2848 Male, age 76, right hemisphere 1658.2
1847 Female, age 91, left hemisphere 1328.4
2521 Female, age 94, right hemisphere 935.3
Subiculum
nTPM: 694.4
2438 Female, age 94, left hemisphere 893.6
1901 Male, age 80, both hemispheres 838.2
2619 Male, age 74, both hemispheres 736.9
2042 Male, age 76, both hemispheres 639.1
1977 Female, age 85, both hemispheres 627.1
2729 Female, age 91, right hemisphere 431.3

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 805.1
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 805.1
Samples: 197

Max nTPM: 3330.2
Min nTPM: 45.8
Std nTPM: 589.4
Median nTPM: 675.8
GTEX-1EWIQ-0011-R1a-SM-9OSX7 70-79 years, female 3330.2
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 2626.1
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 2591.5
GTEX-P44G-0011-R1A-SM-2I3FE 30-39 years, male 2532.3
GTEX-145MH-0011-R1b-SM-5PNWY 50-59 years, male 2408.6
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 2380.5
GTEX-Y8DK-0011-R1A-SM-4RGLO 60-69 years, male 2091.7
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 2079.8
GTEX-WL46-0011-R1A-SM-3LK6M 50-59 years, male 2035.7
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 1988.7
GTEX-1F75A-0011-R1b-SM-CE6RA 50-59 years, male 1964.8
Show allShow less

HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 1071.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 1071.5
FF:10169-103B7 60 years, female 1117.5
FF:10153-102I9 76 years, female 1025.6

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 1840.3
Pig sample Sample description nTPM
Subiculum
nTPM: 624.0
Samples: 4

Max nTPM: 875.4
Min nTPM: 436.1
Sample A Female 875.4
Sample B Female 436.1
Sample C Male 689.9
Sample D Male 494.5
Dorsal hippocampus
nTPM: 1410.2
Samples: 4

Max nTPM: 1771.8
Min nTPM: 1115.8
Sample A Female 1771.8
Sample B Female 1501.0
Sample C Male 1115.8
Sample D Male 1252.1
Entorhinal cortex
nTPM: 1840.3
Samples: 4

Max nTPM: 2251.2
Min nTPM: 1376.8
Sample A Female 2108.9
Sample B Female 2251.2
Sample C Male 1376.8
Sample D Male 1624.4
Ventral hippocampus
nTPM: 1251.3
Samples: 4

Max nTPM: 1784.7
Min nTPM: 723.6
Sample A Female 1209.9
Sample B Female 723.6
Sample C Male 1286.9
Sample D Male 1784.7

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 643.7
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 587.0
Samples: 4

Max nTPM: 769.6
Min nTPM: 447.7
Sample A Male 665.2
Sample B Male 769.6
Sample C Female 465.3
Sample D Female 447.7
Hippocampal formation
nTPM: 643.7
Samples: 4

Max nTPM: 712.9
Min nTPM: 547.1
Sample A Male 547.1
Sample B Male 712.9
Sample C Female 693.8
Sample D Female 620.9

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 32.2
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 32.2
69153790 Antisense, RP_050330_01_A03, Mouse strain C57BL/6J (56 days, male) 32.2
69153759 Antisense, RP_050330_01_A03, Mouse strain C57BL/6J (56 days, male) 28.5
737 Antisense, RP_050330_01_A03, Mouse strain C57BL/6J (56 days, male) 12.6
736 Antisense, RP_050330_01_A03, Mouse strain C57BL/6J (56 days, male) 7.3

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.


contact@proteinatlas.org