We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
TSPAN7
HPA
RESOURCES
  • TISSUE
  • BRAIN
  • SINGLE CELL
  • SUBCELLULAR
  • CANCER
  • BLOOD
  • CELL LINE
  • STRUCTURE & INTERACTION
ABOUT
  • INTRODUCTION
  • HISTORY
  • ORGANIZATION
  • PUBLICATIONS
  • ANTIBODY SUBMISSION
  • ANTIBODY AVAILABILITY
  • ACKNOWLEDGMENTS
  • CONTACT
NEWS
  • NEWS ARTICLES
  • PRESS ROOM
LEARN
  • DICTIONARY
  • PROTEIN CLASSES
  • PROTEIN EVIDENCE
  • METHODS
  • EDUCATIONAL VIDEOS
DATA
  • DOWNLOADABLE DATA
  • PUBLICATION DATA
  • RELEASE HISTORY
HELP
  • ANTIBODY VALIDATION
  • ASSAYS & ANNOTATION
  • DISCLAIMER
  • HELP & FAQ
  • PRIVACY STATEMENT
  • LICENCE & CITATION
Fields »
Search result

Field
Term
Gene name
Class
Subclass
Class
Keyword
Chromosome
External id
Tissue
Cell type
Expression
Antibody panel
Tissue
Main location
Patient ID
Annotation
Tissue
Category
Tau score
Cluster
Reliability
Brain region
Category
Tau score
Brain region
Category
Tau score
Brain region
Category
Tau score
Cluster
Reliability
Tissue
Cell type
Enrichment
Cell type
Category
Tau score
Cell type
Category
Tau score
Cell type
Category
Tau score
Cell lineage
Category
Tau score
Cluster
Cluster
Location
Searches
Location
Cell line
Class
Type
Phase
Reliability
Cancer
Prognosis
Cancer
Category
Cancer
Category
Tau score
Cluster
Variants
Interacting gene (ensg_id)
Type
Number of interactions
Pathway
Category
Score
Score
Score
Validation
Validation
Validation
Validation
Antibodies
Data type
Column


  • SUMMARY

  • TISSUE

  • BRAIN

  • SINGLE CELL

  • SUBCELL

  • CANCER

  • BLOOD

  • CELL LINE

  • STRUCT & INT

  • TSPAN7
BRAIN BASAL GANGLIA Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS MEDULLA OBLONGATA
MIDBRAIN OLFACTORY BULB PITUITARY GLAND PONS RETINA SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
AND
VALIDATION
Brain proteome
Basal ganglia
BASAL GANGLIA - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:287.8 nTPM
HPA Brain:504.4 nTPM
GTEx:287.8 nTPM
FANTOM5:1386.9 Scaled Tags Per Million
Pig:615.3 nTPM
Mouse:1884.0 nTPM
Allen mouse:24.5 Expression energy

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA003140Antibody CAB062566Antibody CAB068245
Glial cells Not detectedNot detectedNot detected
Neuronal cells MediumMediumMedium







BASAL GANGLIA - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

504.4
Sample id Sample description nTPM
Caudate nucleus
nTPM: 469.1
1857 Female, age 85, left hemisphere 608.1
2290 Female, age 72, unknown 547.8
1854 Male, age 80, left hemisphere 529.8
2288 Male, age 75, left hemisphere 464.8
2481 Female, age 94, left hemisphere 453.5
2846 Female, age 79, unknown 431.7
1781 Male, age 74, unknown 408.1
2289 Male, age 61, right hemisphere 309.2
Globus pallidus, externus
nTPM: 124.1
2772 Female, age 79, unknown 147.5
2395 Male, age 75, both hemispheres 141.0
1996 Male, age 80, right hemisphere 132.1
2646 Male, age 61, right hemisphere 115.7
2567 Female, age 72, unknown 84.0
Globus pallidus, internus
nTPM: 125.5
2483 Female, age 94, right hemisphere 231.1
1818 Male, age 74, unknown 153.7
2287 Male, age 75, right hemisphere 138.3
2037 Male, age 80, right hemisphere 116.2
2778 Female, age 91, both hemispheres 95.2
2566 Female, age 72, unknown 92.2
2111 Female, age 85, right hemisphere 52.0
Nucleus accumbens
nTPM: 504.4
1856 Female, age 91, right hemisphere 767.6
2824 Male, age 61, right hemisphere 666.8
1806 Female, age 85, left hemisphere 553.1
1783 Male, age 74, unknown 515.8
2698 Female, age 72, unknown 511.2
2286 Male, age 75, left hemisphere 510.2
2391 Female, age 94, left hemisphere 297.0
2732 Male, age 80, right hemisphere 213.4
Nucleus basalis of Meynert
nTPM: 254.0
2393 Male, age 80, right hemisphere 352.1
2484 Female, age 94, left hemisphere 284.2
2821 Male, age 75, both hemispheres 247.9
2569 Male, age 61, both hemispheres 131.8
Nucleus of the diagonal band
nTPM: 408.7
2029 Male, age 61, right hemisphere 480.6
1812 Female, age 91, both hemispheres 463.9
2775 Male, age 80, right hemisphere 404.1
2195 Female, age 85, both hemispheres 389.0
1979 Male, age 74, unknown 305.9
Putamen
nTPM: 399.7
1838 Male, age 80, right hemisphere 586.4
1937 Female, age 91, right hemisphere 558.6
2466 Female, age 79, unknown 402.4
1829 Male, age 74, unknown 395.7
2482 Female, age 94, left hemisphere 391.4
2489 Female, age 72, unknown 248.9
2647 Male, age 75, left hemisphere 214.3
Septal nuclei
nTPM: 344.6
2031 Female, age 72, unknown 540.5
1960 Male, age 74, unknown 432.1
2629 Female, age 94, right hemisphere 365.9
2009 Female, age 91, both hemispheres 360.8
2059 Female, age 85, both hemispheres 323.3
2394 Male, age 61, left hemisphere 195.5
2199 Male, age 80, right hemisphere 193.8
Stria terminalis, bed nucleus
nTPM: 339.0
1974 Female, age 91, both hemispheres 434.9
2486 Female, age 94, both hemispheres 376.1
2201 Male, age 74, unknown 206.1

BASAL GANGLIA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

287.8
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 242.2
Samples: 246

Max nTPM: 611.2
Min nTPM: 32.3
Std nTPM: 112.4
Median nTPM: 237.5
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 611.2
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 609.4
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 570.4
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 503.9
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 496.6
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 485.9
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 479.1
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 469.8
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 466.2
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 461.2
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 451.1
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 445.0
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 430.9
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 430.1
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 422.1
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 420.6
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 419.3
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 414.1
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 413.7
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 411.0
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 410.0
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 401.7
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 400.6
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 393.8
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 390.4
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 388.7
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 388.4
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 386.3
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 385.8
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 382.8
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 376.8
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 375.0
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 371.9
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 371.0
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 366.2
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 362.6
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 358.4
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 357.1
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 350.3
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 350.2
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 348.4
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 346.8
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 344.6
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 341.9
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 341.2
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 339.0
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 337.6
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 336.8
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 335.1
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 332.6
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 331.7
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 330.5
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 329.3
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 323.2
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 322.2
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 321.2
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 319.8
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 319.3
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 318.5
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 317.7
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 317.5
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 317.3
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 316.7
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 315.3
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 315.0
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 313.0
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 313.0
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 312.0
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 309.8
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 307.5
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 307.4
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 306.3
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 305.5
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 299.3
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 298.8
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 298.2
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 296.4
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 295.6
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 293.7
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 288.8
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 287.4
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 283.0
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 281.3
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 280.8
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 278.6
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 278.5
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 277.9
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 276.9
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 274.2
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 273.1
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 272.3
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 269.1
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 268.4
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 268.1
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 266.6
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 265.6
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 265.6
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 264.1
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 263.5
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 263.4
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 263.2
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 260.7
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 260.2
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 258.2
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 257.2
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 256.4
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 256.1
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 255.4
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 255.3
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 254.1
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 252.7
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 252.5
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 251.6
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 250.4
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 248.5
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 245.5
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 244.5
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 243.1
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 241.8
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 241.2
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 240.5
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 239.0
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 237.7
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 237.3
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 235.1
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 229.0
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 228.7
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 227.9
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 225.0
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 224.7
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 223.2
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 221.9
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 221.1
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 219.8
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 217.4
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 217.0
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 216.5
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 216.0
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 212.4
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 211.0
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 210.7
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 210.4
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 208.8
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 208.0
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 207.3
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 207.1
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 204.3
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 203.8
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 203.3
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 202.3
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 197.8
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 197.5
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 196.2
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 195.9
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 194.8
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 194.7
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 193.9
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 193.1
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 191.9
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 190.7
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 188.5
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 187.3
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 186.0
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 185.7
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 185.0
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 181.5
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 179.3
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 177.8
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 177.1
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 176.5
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 176.3
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 175.4
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 175.3
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 174.0
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 173.8
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 172.8
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 167.4
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 166.7
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 164.6
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 162.5
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 162.3
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 161.0
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 159.2
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 157.2
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 156.8
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 155.8
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 154.9
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 150.0
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 147.2
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 145.5
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 142.5
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 142.3
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 140.5
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 139.9
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 139.4
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 139.3
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 138.7
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 138.3
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 136.8
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 134.3
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 134.0
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 132.7
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 131.6
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 129.5
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 129.5
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 121.2
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 117.4
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 116.2
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 115.7
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 114.5
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 113.4
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 113.0
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 112.3
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 111.9
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 111.5
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 108.1
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 107.3
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 105.4
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 105.4
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 103.2
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 103.2
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 102.0
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 100.7
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 99.4
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 96.5
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 94.3
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 94.3
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 91.4
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 90.1
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 86.8
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 86.0
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 84.9
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 82.7
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 81.5
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 76.1
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 72.3
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 72.3
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 68.9
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 67.9
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 65.3
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 64.0
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 51.2
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 50.4
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 49.7
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 42.6
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 32.3
Show allShow less
Brain - Nucleus accumbens (basal ganglia)
Average nTPM: 287.8
Samples: 246

Max nTPM: 749.3
Min nTPM: 9.1
Std nTPM: 175.7
Median nTPM: 265.4
GTEX-16YQH-0011-R6b-SM-7938T 30-39 years, male 749.3
GTEX-1B933-0011-R6b-SM-79OOQ 50-59 years, female 710.3
GTEX-XLM4-0011-R6A-SM-4AT4B 60-69 years, male 656.7
GTEX-145MH-0011-R6a-SM-5PNZ7 50-59 years, male 648.0
GTEX-1AX9I-0011-R6a-SM-7P8PK 60-69 years, male 645.7
GTEX-1GN73-0011-R6b-SM-CJI2T 60-69 years, male 640.0
GTEX-13OVL-0011-R6a-SM-5L3G4 50-59 years, male 631.6
GTEX-13X6J-0011-R6a-SM-5PNUB 50-59 years, male 629.9
GTEX-13VXU-0011-R6a-SM-5SI71 50-59 years, male 621.1
GTEX-N7MS-0011-R6a-SM-2HMJ4 60-69 years, male 620.8
GTEX-1HB9E-0011-R6b-SM-A9G1P 50-59 years, male 618.9
GTEX-NL3H-0011-R6a-SM-2I3G8 60-69 years, male 614.7
GTEX-14PJM-0011-R6a-SM-6872G 50-59 years, female 607.3
GTEX-1F7RK-0011-R6b-SM-ARZMG 20-29 years, female 600.0
GTEX-18464-0011-R6a-SM-731CA 50-59 years, male 596.6
GTEX-1I1GV-0011-R6b-SM-ARU6Q 60-69 years, male 594.9
GTEX-1B8L1-0011-R6b-SM-7P8SU 60-69 years, male 590.1
GTEX-15ER7-0011-R6a-SM-6M46M 20-29 years, female 588.6
GTEX-1I1CD-0011-R6b-SM-CJI3Y 60-69 years, female 586.9
GTEX-1F75A-0011-R6b-SM-9QEHD 50-59 years, male 581.6
GTEX-1313W-0011-R6a-SM-5K7XO 50-59 years, female 563.3
GTEX-14BMV-0011-R6b-SM-5YY9I 50-59 years, male 544.6
GTEX-15CHQ-0011-R6b-SM-69LOX 60-69 years, male 544.5
GTEX-1ICLZ-0011-R6b-SM-A9G3A 60-69 years, male 535.2
GTEX-1OJC4-0011-R6a-SM-EXOIM 50-59 years, female 531.4
GTEX-1F6IF-0011-R6a-SM-9QEIO 60-69 years, male 529.4
GTEX-14JIY-0011-R6b-SM-68714 60-69 years, male 527.9
GTEX-1LVAO-0011-R6b-SM-EZ6MX 60-69 years, male 527.6
GTEX-14BIN-0011-R6a-SM-5S2RH 50-59 years, female 526.8
GTEX-13O3Q-0011-R6a-SM-5KM2V 50-59 years, male 520.8
GTEX-Q2AG-0011-R6A-SM-2HML7 40-49 years, female 509.5
GTEX-1A3MX-0011-R6a-SM-7P8S9 60-69 years, male 508.0
GTEX-1EMGI-0011-R6a-SM-9OSVR 60-69 years, male 506.9
GTEX-17HG3-0011-R6b-SM-79OK8 30-39 years, female 504.1
GTEX-QVJO-0011-R6A-SM-2S1QN 60-69 years, female 500.9
GTEX-13OW6-0011-R6b-SM-5L3GR 50-59 years, male 500.5
GTEX-1F75W-0011-R6a-SM-9QEI5 60-69 years, male 487.0
GTEX-17EVP-0011-R6b-SM-7LT99 40-49 years, male 486.5
GTEX-15RJE-0011-R6a-SM-7DHL8 40-49 years, male 477.6
GTEX-1GTWX-0011-R6a-SM-A96RN 60-69 years, male 476.5
GTEX-1MJK2-0011-R6a-SM-EXUS3 50-59 years, male 475.7
GTEX-1JMLX-0011-R6b-SM-EXUT9 50-59 years, male 475.4
GTEX-1B8SF-0011-R6b-SM-7MXUD 60-69 years, male 474.7
GTEX-1GZ2Q-0011-R6a-SM-9OSWM 40-49 years, male 471.3
GTEX-1HT8W-0011-R6a-SM-CM2SY 30-39 years, male 469.2
GTEX-131XH-0011-R6a-SM-5KM2G 50-59 years, male 467.8
GTEX-1GZ4I-0011-R6b-SM-9WG77 50-59 years, male 463.5
GTEX-1IDJH-0011-R6a-SM-A9SLZ 70-79 years, male 458.6
GTEX-145LS-0011-R6b-SM-5PNWL 60-69 years, female 452.9
GTEX-1EX96-0011-R6a-SM-9OSVV 50-59 years, male 448.5
GTEX-1CB4G-0011-R6b-SM-9QEGO 60-69 years, male 445.9
GTEX-14ABY-0011-R6a-SM-5PNWR 50-59 years, male 445.0
GTEX-WWYW-0011-R6A-SM-3NB3G 50-59 years, female 437.4
GTEX-11DXY-0011-R6a-SM-DNZZF 60-69 years, male 435.0
GTEX-12ZZX-0011-R6a-SM-5HL8L 40-49 years, female 434.5
GTEX-14JG1-0011-R6b-SM-5YYAU 40-49 years, male 433.0
GTEX-13X6K-0011-R6a-SM-5P9K6 60-69 years, female 432.7
GTEX-1I1GR-0011-R6a-SM-CMKHI 60-69 years, male 432.4
GTEX-13NYB-0011-R6b-SM-5MR51 40-49 years, male 428.8
GTEX-13FLW-0011-R6b-SM-5L3EN 50-59 years, male 427.6
GTEX-NPJ7-0011-R6a-SM-2I3G7 60-69 years, female 424.3
GTEX-13RTJ-0011-R6a-SM-5SI74 60-69 years, male 420.8
GTEX-NPJ8-0011-R6a-SM-2HMKB 40-49 years, male 419.9
GTEX-1IY9M-0011-R6a-SM-D4P28 60-69 years, male 418.7
GTEX-WHSE-0011-R6A-SM-3P5ZP 20-29 years, male 416.0
GTEX-1HGF4-0011-R6a-SM-A96S1 60-69 years, male 415.0
GTEX-1F6I4-0011-R6a-SM-CE6R4 60-69 years, male 413.6
GTEX-N7MT-0011-R6a-SM-2I3G3 60-69 years, female 410.5
GTEX-1GF9V-0011-R6b-SM-CJI2Q 60-69 years, male 409.9
GTEX-1LH75-0011-R6a-SM-EXURS 50-59 years, female 408.0
GTEX-WZTO-0011-R6B-SM-4E3J6 40-49 years, male 406.4
GTEX-1H1CY-0011-R6b-SM-CE6RP 60-69 years, female 406.4
GTEX-1GN1U-0011-R6a-SM-CKZNO 50-59 years, female 402.4
GTEX-13NYS-0011-R6b-SM-5MR3R 60-69 years, male 400.7
GTEX-1EKGG-0011-R6a-SM-CL538 60-69 years, male 390.6
GTEX-R55E-0011-R6A-SM-2TC5T 20-29 years, male 387.1
GTEX-11NV4-0011-R6a-SM-57WD5 60-69 years, male 380.0
GTEX-1C6VR-0011-R6a-SM-7MXU8 60-69 years, male 378.5
GTEX-14BIM-0011-R6b-SM-5S2VB 60-69 years, female 375.5
GTEX-12ZZY-0011-R6b-SM-5EGLA 60-69 years, male 373.4
GTEX-1B996-0011-R6b-SM-793AQ 60-69 years, male 363.8
GTEX-T6MN-0011-R6A-SM-32QP8 50-59 years, male 360.6
GTEX-12WSC-0011-R6b-SM-5LU99 50-59 years, male 356.4
GTEX-Z93S-0011-R6b-SM-4RGNJ 50-59 years, male 355.3
GTEX-X4XX-0011-R6B-SM-46MWP 60-69 years, male 350.4
GTEX-ZXG5-0011-R6a-SM-57WBZ 60-69 years, male 349.6
GTEX-139TT-0011-R6b-SM-5J2ON 60-69 years, male 349.5
GTEX-1GF9W-0011-R6b-SM-9QEIE 60-69 years, male 344.7
GTEX-1H1DG-0011-R6a-SM-A9SK8 70-79 years, male 341.2
GTEX-14C5O-0011-R6a-SM-5YYB6 60-69 years, male 340.7
GTEX-13FLV-0011-R6a-SM-5KLZ4 50-59 years, male 340.4
GTEX-13O3O-0011-R6b-SM-5P9GY 60-69 years, female 338.1
GTEX-14PN4-0011-R6b-SM-69LQU 50-59 years, male 338.1
GTEX-1H3NZ-0011-R6b-SM-A9G1N 60-69 years, male 336.7
GTEX-14E7W-0011-R6b-SM-5ZZV3 70-79 years, male 335.9
GTEX-1192X-0011-R6a-SM-DNZZB 50-59 years, male 335.2
GTEX-13SLX-0011-R6a-SM-5PNX4 50-59 years, female 330.3
GTEX-T5JC-0011-R6A-SM-D3L87 20-29 years, male 330.1
GTEX-11NUK-0011-R6a-SM-DO93O 50-59 years, male 329.7
GTEX-11DZ1-0011-R6b-SM-DNZZG 50-59 years, male 325.9
GTEX-12ZZZ-0011-R6b-SM-5EQ5B 60-69 years, male 323.8
GTEX-17HHY-0011-R6b-SM-7189Z 50-59 years, male 317.4
GTEX-132Q8-0011-R6a-SM-5K7YN 60-69 years, male 317.1
GTEX-QMR6-0011-R6A-SM-32PKP 50-59 years, male 316.5
GTEX-ZVZQ-0011-R6b-SM-57WAY 60-69 years, female 311.4
GTEX-NL4W-0011-R6a-SM-2I3GA 50-59 years, male 307.3
GTEX-1H1ZS-0011-R6b-SM-A9G1F 70-79 years, male 304.6
GTEX-1I1GQ-0011-R6b-SM-CE6SE 50-59 years, male 301.9
GTEX-UTHO-0011-R6A-SM-3GIJW 60-69 years, male 301.8
GTEX-11OF3-0011-R6b-SM-57WBG 60-69 years, male 300.8
GTEX-147GR-0011-R6b-SM-5S2RO 60-69 years, male 295.4
GTEX-ZDXO-0011-R6a-SM-4WWCT 60-69 years, male 293.4
GTEX-X585-0011-R6A-SM-46MVJ 50-59 years, male 292.4
GTEX-13112-0011-R6b-SM-5DUVK 50-59 years, male 291.2
GTEX-13G51-0011-R6b-SM-5LZX4 60-69 years, male 289.1
GTEX-18A6Q-0011-R6a-SM-7LG6R 60-69 years, male 288.7
GTEX-17F97-0011-R6a-SM-7EPGS 50-59 years, male 277.3
GTEX-1HR9M-0011-R6a-SM-ARU6Z 60-69 years, male 277.1
GTEX-1LVA9-0011-R6a-SM-EYYWH 50-59 years, male 274.6
GTEX-T2IS-0011-R6A-SM-32QP2 20-29 years, female 273.2
GTEX-13OW5-0011-R6b-SM-5O9BW 60-69 years, male 270.7
GTEX-13N2G-0011-R6b-SM-5MR3P 60-69 years, male 270.5
GTEX-WVLH-0011-R6A-SM-3MJFZ 50-59 years, male 265.9
GTEX-15DCD-0011-R6b-SM-6M46L 70-79 years, female 264.9
GTEX-ZE9C-0011-R6a-SM-4WWCW 60-69 years, male 263.1
GTEX-144GL-0011-R6a-SM-5P9HW 50-59 years, male 261.5
GTEX-13OVJ-0011-R6b-SM-5L3GH 50-59 years, female 261.1
GTEX-12WSF-0011-R6b-SM-5HL8W 70-79 years, male 258.8
GTEX-Y8DK-0011-R6A-SM-4V6EG 60-69 years, male 258.3
GTEX-TSE9-0011-R6A-SM-3DB7L 60-69 years, female 256.4
GTEX-XMD1-0011-R6A-SM-4AT5K 60-69 years, male 250.0
GTEX-147F4-0011-R6b-SM-5S2UP 50-59 years, male 247.8
GTEX-1GMR8-0011-R6b-SM-CE6RC 50-59 years, female 247.1
GTEX-1HBPI-0011-R6b-SM-A9G1T 50-59 years, male 247.1
GTEX-1GN2E-0011-R6b-SM-9QEII 60-69 years, male 246.7
GTEX-17MF6-0011-R6b-SM-7LG6G 40-49 years, male 244.2
GTEX-12WSH-0011-R6b-SM-5P9F4 50-59 years, male 243.4
GTEX-1HBPH-0011-R6a-SM-CKZOV 40-49 years, female 242.1
GTEX-1HUB1-0011-R6b-SM-ARU6W 60-69 years, male 234.0
GTEX-S7SE-0011-R6A-SM-2XCD9 50-59 years, male 232.8
GTEX-1IKK5-0011-R6b-SM-A9SLY 60-69 years, male 232.8
GTEX-1J8Q2-0011-R6a-SM-CKZPG 60-69 years, male 228.9
GTEX-11ONC-0011-R6a-SM-DO12A 60-69 years, male 228.0
GTEX-13FHO-0011-R6b-SM-5LZX1 60-69 years, male 225.8
GTEX-13JVG-0011-R6a-SM-5MR3E 60-69 years, male 225.4
GTEX-14ASI-0011-R6a-SM-5S2UZ 60-69 years, male 224.9
GTEX-P44G-0011-R6A-SM-2XCD3 30-39 years, male 224.5
GTEX-1MA7X-0011-R6a-SM-EYYWR 60-69 years, male 222.5
GTEX-13FXS-0011-R6b-SM-5L3F7 50-59 years, male 221.2
GTEX-11TTK-0011-R6b-SM-DNZZW 60-69 years, female 220.5
GTEX-1JJEA-0011-R6a-SM-EXUS1 60-69 years, male 218.8
GTEX-1C6WA-0011-R6a-SM-7PBYP 60-69 years, male 215.8
GTEX-13S7M-0011-R6b-SM-5O9D8 60-69 years, female 215.7
GTEX-131XW-0011-R6b-SM-5K7XY 50-59 years, female 214.5
GTEX-RU72-0011-R6A-SM-2TF71 50-59 years, female 213.7
GTEX-1E1VI-0011-R6a-SM-9OSVJ 50-59 years, male 213.1
GTEX-1N2DW-0011-R6a-SM-EZ6MW 50-59 years, male 207.8
GTEX-14LZ3-0011-R6a-SM-D3L8C 60-69 years, female 198.4
GTEX-145MI-0011-R6a-SM-5PNZA 60-69 years, female 195.5
GTEX-13JUV-0011-R6b-SM-5LZYG 40-49 years, female 188.8
GTEX-1399T-0011-R6b-SM-5K7YL 60-69 years, male 187.7
GTEX-17JCI-0011-R6a-SM-72D6D 60-69 years, female 187.4
GTEX-1J1OQ-0011-R6a-SM-ARU86 40-49 years, female 186.6
GTEX-QVUS-0011-R6A-SM-3GACX 60-69 years, female 183.7
GTEX-11WQC-0011-R6a-SM-5BC77 60-69 years, male 182.6
GTEX-15DYW-0011-R6b-SM-6PALA 60-69 years, female 180.0
GTEX-12WSE-0011-R6b-SM-5LZV5 20-29 years, male 173.0
GTEX-183WM-0011-R6b-SM-72D66 70-79 years, female 171.4
GTEX-1CB4J-0011-R6b-SM-9WG7B 60-69 years, male 169.8
GTEX-WL46-0011-R6A-SM-3LK6X 50-59 years, male 165.1
GTEX-1I19N-0011-R6b-SM-CY8GC 70-79 years, male 163.7
GTEX-11O72-0011-R6a-SM-DNZZQ 40-49 years, male 160.3
GTEX-13OW8-0011-R6b-SM-5L3I3 60-69 years, male 159.6
GTEX-14PQA-0011-R6b-SM-6AJAM 50-59 years, female 159.5
GTEX-11PRG-0011-R6b-SM-DO923 50-59 years, male 159.3
GTEX-PWO3-0011-R6A-SM-2I5F3 60-69 years, female 154.8
GTEX-144GO-0011-R6b-SM-5S2V7 60-69 years, male 154.6
GTEX-13QJC-0011-R6a-SM-5S2VI 60-69 years, female 151.1
GTEX-15EO6-0011-R6a-SM-7KULK 50-59 years, male 150.8
GTEX-1BAJH-0011-R6b-SM-7MXT2 70-79 years, male 149.0
GTEX-1IL2U-0011-R6a-SM-ARZLG 60-69 years, male 147.7
GTEX-1A8G6-0011-R6b-SM-7P8PE 60-69 years, male 147.2
GTEX-1445S-0011-R6b-SM-5PNUF 60-69 years, male 143.7
GTEX-12WSD-0011-R6b-SM-5P9JU 60-69 years, female 141.4
GTEX-1H4P4-0011-R6a-SM-ARZLR 50-59 years, male 140.5
GTEX-1IKOH-0011-R6b-SM-A9G1W 60-69 years, female 140.3
GTEX-11DYG-0011-R6a-SM-DO936 60-69 years, male 137.5
GTEX-11GSP-0011-R6b-SM-57WBQ 60-69 years, female 134.8
GTEX-1F48J-0011-R6a-SM-CJI2F 50-59 years, female 133.7
GTEX-16Z82-0011-R6a-SM-7IGLV 60-69 years, male 129.7
GTEX-ZVT3-0011-R6a-SM-51MSU 60-69 years, female 127.5
GTEX-1GMRU-0011-R6b-SM-A9G3B 50-59 years, male 125.5
GTEX-1EH9U-0011-R6a-SM-CJI2C 60-69 years, male 124.3
GTEX-13N1W-0011-R6a-SM-5MR43 70-79 years, male 123.8
GTEX-18465-0011-R6a-SM-7LG6M 50-59 years, male 118.8
GTEX-S7PM-0011-R6A-SM-3NM8F 60-69 years, male 109.4
GTEX-1LB8K-0011-R6a-SM-EXURT 50-59 years, male 108.7
GTEX-12WSM-0011-R6b-SM-5EQ6N 60-69 years, male 107.1
GTEX-11DXW-0011-R6a-SM-DO11N 40-49 years, male 105.6
GTEX-ZV68-0011-R6a-SM-51MSR 50-59 years, female 100.0
GTEX-145LU-0011-R6a-SM-5S2V6 50-59 years, male 99.7
GTEX-13PL6-0011-R6a-SM-5O9C5 40-49 years, female 91.7
GTEX-139TS-0011-R6a-SM-5J2OB 60-69 years, male 91.3
GTEX-ZUA1-0011-R6b-SM-4YCDD 40-49 years, male 90.6
GTEX-X4EP-0011-R6A-SM-3P629 60-69 years, female 90.3
GTEX-1H23P-0011-R6b-SM-A9G1H 60-69 years, male 89.7
GTEX-12ZZW-0011-R6a-SM-5DUVZ 50-59 years, male 89.5
GTEX-YJ89-0011-R6a-SM-4V6GN 60-69 years, male 89.0
GTEX-1GZHY-0011-R6a-SM-9OSWL 50-59 years, female 87.1
GTEX-13SLW-0011-R6a-SM-5O9BH 70-79 years, male 86.9
GTEX-1CB4H-0011-R6b-SM-CKZNK 60-69 years, female 80.9
GTEX-1I1HK-0011-R6b-SM-CM2T9 60-69 years, male 80.4
GTEX-1R46S-0011-R6a-SM-EZ6N6 60-69 years, female 77.5
GTEX-1C64N-0011-R6a-SM-7IGO9 50-59 years, male 75.9
GTEX-1HFI6-0011-R6b-SM-CM2SR 40-49 years, male 75.5
GTEX-X261-0011-R6B-SM-4E3J8 50-59 years, male 73.2
GTEX-1I1GS-0011-R6b-SM-CMKHE 60-69 years, male 72.0
GTEX-ZE7O-0011-R6a-SM-57WCI 50-59 years, female 67.8
GTEX-1HBPM-0011-R6b-SM-ARU73 60-69 years, female 66.3
GTEX-X4XY-0011-R6B-SM-46MVB 60-69 years, male 61.2
GTEX-12584-0011-R6a-SM-5NQ7C 40-49 years, male 60.5
GTEX-ZAB4-0011-R6a-SM-4SOKD 40-49 years, male 59.6
GTEX-16XZZ-0011-R6a-SM-7IGNE 60-69 years, male 59.0
GTEX-QDT8-0011-R6A-SM-32PKI 30-39 years, female 58.4
GTEX-YFC4-0011-R6b-SM-4V6E1 40-49 years, female 58.0
GTEX-1EN7A-0011-R6b-SM-9QEHW 40-49 years, male 54.5
GTEX-13OVH-0011-R6b-SM-5LUAX 70-79 years, male 54.1
GTEX-1H3O1-0011-R6b-SM-CL54U 60-69 years, male 52.7
GTEX-15G19-0011-R6b-SM-7KUM3 60-69 years, male 52.3
GTEX-OHPN-0011-R6A-SM-2I5FH 60-69 years, female 50.5
GTEX-13FHP-0011-R6b-SM-5LZY6 50-59 years, male 47.9
GTEX-13IVO-0011-R6b-SM-5K7X9 70-79 years, male 47.0
GTEX-1IGQW-0011-R6a-SM-CM2TC 60-69 years, male 46.7
GTEX-1EWIQ-0011-R6a-SM-ARU8G 70-79 years, female 46.5
GTEX-1F88E-0011-R6a-SM-CKZNW 60-69 years, female 46.4
GTEX-14PHW-0011-R6b-SM-5YYAR 60-69 years, female 45.5
GTEX-1F75B-0011-R6a-SM-ARZMI 50-59 years, male 43.2
GTEX-P44H-0011-R6A-SM-2XCF3 40-49 years, male 35.9
GTEX-17EVQ-0011-R6a-SM-7189U 70-79 years, male 35.0
GTEX-1H3VE-0011-R6b-SM-A9G1M 40-49 years, male 34.9
GTEX-1LC47-0011-R6b-SM-EZ6MI 60-69 years, male 32.4
GTEX-ZF28-0011-R6a-SM-4WKHI 60-69 years, male 31.6
GTEX-14753-0011-R6b-SM-5S2UD 60-69 years, male 25.7
GTEX-1E2YA-0011-R6b-SM-CE6R2 50-59 years, male 25.4
GTEX-13PDP-0011-R6b-SM-5O9D5 60-69 years, male 21.4
GTEX-1RLM8-0011-R6a-SM-EYYXS 50-59 years, male 9.1
Show allShow less
Brain - Putamen (basal ganglia)
Average nTPM: 212.0
Samples: 205

Max nTPM: 473.5
Min nTPM: 45.8
Std nTPM: 90.4
Median nTPM: 212.6
GTEX-QVJO-0011-R7A-SM-2S1QO 60-69 years, female 473.5
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 458.7
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 441.4
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 431.6
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 408.1
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 405.8
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 390.0
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 376.4
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 368.4
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 368.3
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 366.5
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 358.4
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 357.1
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 350.9
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 348.7
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 348.1
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 344.4
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 340.7
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 339.1
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 336.5
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 332.1
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 330.5
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 330.0
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 330.0
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 322.3
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 321.1
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 320.1
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 317.7
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 316.2
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 311.3
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 309.2
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 305.9
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 305.2
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 304.8
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 303.1
GTEX-S7SE-0011-R7A-SM-2XCDI 50-59 years, male 299.8
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 299.2
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 298.4
GTEX-1IOXB-0011-R7b-SM-CE6SM 50-59 years, male 296.6
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 291.4
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 291.0
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 290.5
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 290.5
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 289.7
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 285.8
GTEX-R55E-0011-R7A-SM-2TC5Z 20-29 years, male 284.6
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 280.5
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 276.8
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 276.5
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 270.5
GTEX-P44G-0011-R7A-SM-2I3F9 30-39 years, male 270.2
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 270.0
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 269.8
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 269.1
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 267.4
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 266.0
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 263.6
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 262.0
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 261.0
GTEX-1J1OQ-0011-R7b-SM-ARU87 40-49 years, female 258.2
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 254.8
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 251.8
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 250.6
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 247.6
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 246.6
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 246.3
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 246.1
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 245.5
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 244.7
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 244.6
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 244.5
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 243.2
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 238.4
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 238.2
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 237.2
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 236.7
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 236.2
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 235.6
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 234.6
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 234.5
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 231.1
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 230.2
GTEX-NL3H-0011-R7a-SM-2I3G5 60-69 years, male 230.0
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 229.7
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 225.5
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 225.0
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 223.8
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 223.3
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 222.5
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 222.2
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 222.1
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 221.8
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 221.8
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 220.5
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 220.0
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 219.4
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 218.5
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 217.5
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 216.7
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 215.6
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 214.1
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 212.8
GTEX-NPJ8-0011-R7a-SM-2HMJV 40-49 years, male 212.6
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 212.3
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 211.0
GTEX-RU72-0011-R7A-SM-2TF5U 50-59 years, female 210.8
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 207.3
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 206.2
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 204.4
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 201.6
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 200.2
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 197.0
GTEX-N7MS-0011-R7a-SM-2HMKN 60-69 years, male 197.0
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 196.6
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 196.0
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 194.1
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 193.9
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 193.0
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 191.9
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 191.6
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 191.3
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 189.9
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 189.8
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 188.8
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 186.2
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 186.1
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 185.5
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 178.0
GTEX-TSE9-0011-R7A-SM-3DB7P 60-69 years, female 177.8
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 176.9
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 175.9
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 173.9
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 172.0
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 171.6
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 171.2
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 170.9
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 170.0
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 169.8
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 168.9
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 167.0
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 166.7
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 164.1
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 160.3
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 158.2
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 156.3
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 155.8
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 153.2
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 150.5
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 149.8
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 149.6
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 147.9
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 145.3
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 143.9
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 143.3
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 143.2
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 140.7
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 139.0
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 132.9
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 131.4
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 130.9
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 130.4
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 129.0
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 127.7
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 126.8
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 123.1
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 120.5
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 120.1
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 117.2
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 115.7
GTEX-OHPN-0011-R7A-SM-2I5FI 60-69 years, female 114.8
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 113.9
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 111.3
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 110.6
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 109.8
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 109.2
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 107.9
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 107.4
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 104.7
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 104.4
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 101.8
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 98.6
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 97.9
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 97.6
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 97.3
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 96.2
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 92.5
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 91.0
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 89.4
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 85.8
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 83.3
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 82.1
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 81.4
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 80.9
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 77.6
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 77.0
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 76.4
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 69.2
GTEX-18464-0011-R7b-SM-731CM 50-59 years, male 65.7
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 59.7
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 57.9
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 54.9
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 51.8
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 50.3
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 49.8
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 45.8
Show allShow less

BASAL GANGLIA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

1386.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 759.5
FF:10164-103B2 76 years, female 759.5
Nucleus accumbens
Scaled Tags Per Million: 1179.8
FF:10037-101F1 23-56 years, mixed 1179.8
Putamen
Scaled Tags Per Million: 1386.9
FF:10176-103C5 60 years, female 1386.9
Globus pallidus
Scaled Tags Per Million: 240.7
FF:10175-103C4 60 years, female 350.0
FF:10161-103A8 76 years, female 131.5

BASAL GANGLIA - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

615.3
Pig sample Sample description nTPM
Caudate
nTPM: 615.3
Samples: 4

Max nTPM: 781.9
Min nTPM: 483.0
Sample A Female 483.0
Sample B Female 599.4
Sample C Male 781.9
Sample D Male 596.7
Putamen
nTPM: 610.5
Samples: 4

Max nTPM: 866.2
Min nTPM: 416.9
Sample A Female 416.9
Sample B Female 534.5
Sample C Male 866.2
Sample D Male 624.3
Septum
nTPM: 518.5
Samples: 4

Max nTPM: 610.2
Min nTPM: 444.3
Sample A Female 610.2
Sample B Female 528.5
Sample C Male 490.8
Sample D Male 444.3
Ventral pallidum
nTPM: 481.8
Samples: 4

Max nTPM: 565.7
Min nTPM: 420.1
Sample A Female 565.7
Sample B Female 465.9
Sample C Male 420.1
Sample D Male 475.4

BASAL GANGLIA - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

1884.0
Mouse sample Sample description nTPM
Caudate putamen
nTPM: 1884.0
Samples: 4

Max nTPM: 2089.4
Min nTPM: 1750.8
Sample A Male 1750.8
Sample B Male 1875.5
Sample C Female 1820.4
Sample D Female 2089.4
Septum
nTPM: 1661.5
Samples: 4

Max nTPM: 2088.6
Min nTPM: 1338.3
Sample A Male 1338.3
Sample B Male 2088.6
Sample C Female 1703.8
Sample D Female 1515.1
Ventral forebrain
nTPM: 1636.0
Samples: 4

Max nTPM: 1947.4
Min nTPM: 1485.6
Sample A Male 1499.7
Sample B Male 1485.6
Sample C Female 1947.4
Sample D Female 1611.3

BASAL GANGLIA - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

24.5
Allen experiment id Experiment description Expression energy
Striatum
Expression energy: 24.5
72718 Antisense, RP_040407_01_H11, Mouse strain C57BL/6J (56 days, male) 24.5
Pallidum
Expression energy: 22.8
72718 Antisense, RP_040407_01_H11, Mouse strain C57BL/6J (56 days, male) 22.8

Contact

  • NEWS ARTICLES
  • PRESS ROOM

The Project

  • INTRODUCTION
  • ORGANIZATION
  • PUBLICATIONS

The Human Protein Atlas

  • DOWNLOADABLE DATA
  • LICENCE & CITATION
  • HELP & FAQ
The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.


contact@proteinatlas.org