PONS AND MEDULLA - Expression summary
Protein expressioni No data
RNA expressioni
HPA Brain:208.0 nTPM
FANTOM5:407.3 Scaled Tags Per Million
Pig:452.3 nTPM
Mouse:607.9 nTPM
Allen mouse:8.7 Expression energy

PONS AND MEDULLA - HPA Brain RNA-seq
Max subtype nTPMi 208.0
Sample id Sample description nTPM
Anterior cochlear nucleus, ventral
nTPM: 124.1
1984 Male, age 76, both hemispheres 170.5
2301 Female, age 85, both hemispheres 117.6
2188 Female, age 91, both hemispheres 106.8
2090 Male, age 80, both hemispheres 101.5
Area postrema
nTPM: 80.1
2054 Male, age 76, both hemispheres 142.6
2799 Male, age 61, both hemispheres 49.5
2306 Male, age 80, both hemispheres 48.1
Dorsal cochlear nucleus
nTPM: 134.0
2187 Female, age 91, both hemispheres 149.0
2058 Male, age 76, both hemispheres 139.9
2802 Male, age 74, right hemisphere 139.6
2370 Male, age 61, both hemispheres 134.5
2378 Male, age 80, both hemispheres 106.7
Dorsal medullary reticular nucleus
nTPM: 162.7
2040 Female, age 85, both hemispheres 214.7
2373 Male, age 61, both hemispheres 138.9
2088 Male, age 76, both hemispheres 134.4
Dorsal motor vagal complex
nTPM: 150.5
2000 Male, age 74, unknown 200.3
2813 Female, age 72, unknown 195.6
2133 Female, age 91, both hemispheres 190.6
2844 Male, age 55, unknown 189.8
2807 Female, age 85, both hemispheres 112.6
2643 Male, age 74, both hemispheres 109.9
2797 Male, age 61, both hemispheres 108.9
2185 Male, age 76, both hemispheres 96.3
Dorsal tegmental nucleus
nTPM: 143.3
2083 Male, age 80, both hemispheres 171.3
2326 Male, age 74, both hemispheres 147.7
1936 Male, age 76, left hemisphere 141.1
2358 Male, age 61, both hemispheres 113.0
Dorsolateral tegmental area
nTPM: 145.4
2141 Male, age 76, both hemispheres 176.3
2654 Male, age 80, both hemispheres 165.2
2751 Female, age 85, both hemispheres 161.0
2360 Male, age 74, both hemispheres 143.3
2337 Male, age 61, both hemispheres 81.1
Gigantocellular reticular nuclei, medullary
nTPM: 153.3
2022 Male, age 76, right hemisphere 215.6
1876 Female, age 85, both hemispheres 201.5
2462 Male, age 74, both hemispheres 153.9
2310 Male, age 80, both hemispheres 123.6
2387 Female, age 91, both hemispheres 120.4
2314 Male, age 61, both hemispheres 105.2
Gigantocellular reticular nuclei, pars
nTPM: 144.7
2084 Female, age 85, both hemispheres 194.5
2168 Male, age 76, both hemispheres 178.1
2336 Male, age 61, both hemispheres 155.8
2706 Male, age 80, both hemispheres 101.6
2330 Male, age 80, both hemispheres 93.3
Inferior olive
nTPM: 109.4
2563 Male, age 74, both hemispheres 158.0
2085 Female, age 85, both hemispheres 120.8
2628 Female, age 91, both hemispheres 103.2
2379 Male, age 80, both hemispheres 83.5
2178 Male, age 61, both hemispheres 81.5
Kolliker-Fuse nucleus
nTPM: 130.1
2163 Male, age 80, both hemispheres 186.6
2793 Female, age 91, left hemisphere 112.0
2315 Male, age 76, right hemisphere 91.6
Lateral lemniscal nuclei
nTPM: 156.2
2036 Male, age 80, both hemispheres 194.3
2169 Male, age 76, both hemispheres 192.2
2746 Female, age 85, left hemisphere 150.6
2453 Male, age 74, right hemisphere 132.3
2320 Female, age 91, left hemisphere 111.3
Lateral medullary reticular nucleus
nTPM: 131.7
2044 Male, age 76, both hemispheres 188.4
2305 Male, age 74, both hemispheres 137.1
2804 Female, age 91, both hemispheres 128.5
2190 Female, age 85, both hemispheres 128.4
2374 Male, age 61, both hemispheres 116.2
2852 Male, age 80, both hemispheres 91.6
Lateral parabrachial nucleus
nTPM: 130.6
2139 Female, age 85, right hemisphere 197.9
2790 Male, age 61, both hemispheres 128.8
2013 Male, age 80, both hemispheres 119.9
2792 Male, age 76, both hemispheres 75.7
Lateral vestibular nucleus
nTPM: 160.9
2184 Male, age 76, both hemispheres 181.1
2311 Male, age 80, both hemispheres 140.6
Locus coeruleus
nTPM: 175.5
2123 Female, age 91, both hemispheres 204.1
2788 Male, age 74, unknown 198.1
2720 Male, age 74, both hemispheres 190.2
2317 Female, age 72, unknown 169.0
2162 Male, age 80, both hemispheres 159.7
2014 Male, age 55, unknown 154.0
1980 Male, age 76, both hemispheres 153.1
Medial olivary nucleus
nTPM: 78.5
2138 Female, age 91, both hemispheres 96.7
2851 Male, age 80, both hemispheres 87.0
1962 Male, age 76, both hemispheres 67.1
1943 Male, age 61, both hemispheres 63.0
Medial parabrachial nucleus
nTPM: 158.7
2170 Female, age 91, both hemispheres 165.6
2854 Male, age 80, both hemispheres 165.0
2786 Male, age 76, both hemispheres 164.1
2463 Female, age 85, right hemisphere 152.3
2156 Male, age 61, both hemispheres 146.6
Medial periolivary nuclei
nTPM: 141.6
2171 Female, age 85, both hemispheres 212.0
2063 Male, age 76, both hemispheres 181.1
2791 Male, age 74, right hemisphere 140.1
2458 Female, age 91, both hemispheres 90.8
2081 Male, age 80, both hemispheres 84.0
Medial vestibular nucleus
nTPM: 187.0
2801 Male, age 74, both hemispheres 208.2
2803 Female, age 91, both hemispheres 193.0
2093 Male, age 80, both hemispheres 186.4
2134 Male, age 76, both hemispheres 182.4
2743 Female, age 85, both hemispheres 179.1
2624 Male, age 61, both hemispheres 173.1
Motor facial nucleus
nTPM: 148.5
2062 Male, age 76, both hemispheres 191.5
2697 Female, age 85, both hemispheres 158.8
2365 Male, age 74, right hemisphere 152.9
2126 Male, age 61, both hemispheres 139.7
2327 Male, age 80, both hemispheres 135.9
2795 Female, age 91, both hemispheres 112.0
Motor hypoglossal nucleus
nTPM: 163.0
2132 Female, age 85, both hemispheres 201.0
2461 Male, age 61, both hemispheres 179.1
2125 Female, age 91, both hemispheres 173.7
2277 Male, age 76, both hemispheres 141.6
2182 Male, age 80, both hemispheres 119.6
Motor trigeminal nucleus
nTPM: 134.4
2309 Male, age 76, both hemispheres 159.9
2335 Male, age 61, both hemispheres 153.9
2079 Male, age 80, both hemispheres 135.1
2560 Male, age 74, both hemispheres 119.6
2321 Female, age 91, both hemispheres 103.6
Nuclei of the trapezoid body
nTPM: 168.2
2159 Male, age 61, both hemispheres 226.0
2735 Female, age 85, both hemispheres 212.8
1983 Male, age 76, both hemispheres 176.6
2166 Male, age 80, both hemispheres 124.5
2368 Female, age 91, both hemispheres 101.2
Nucleus ambiguus
nTPM: 145.1
2096 Female, age 85, both hemispheres 191.1
2071 Male, age 76, both hemispheres 99.1
Nucleus cuneatus
nTPM: 114.0
2131 Male, age 76, both hemispheres 167.7
2562 Male, age 61, both hemispheres 148.5
2564 Male, age 74, both hemispheres 134.5
2376 Male, age 61, both hemispheres 127.9
2381 Male, age 80, both hemispheres 118.5
2100 Male, age 76, both hemispheres 108.3
2805 Female, age 91, both hemispheres 78.6
2808 Female, age 85, both hemispheres 77.4
2380 Male, age 80, both hemispheres 64.8
Nucleus gracilis
nTPM: 78.3
2627 Male, age 74, both hemispheres 130.9
2382 Male, age 80, both hemispheres 59.9
2299 Female, age 85, both hemispheres 44.2
Nucleus raphe magnus
nTPM: 175.3
2160 Male, age 61, both hemispheres 270.7
2172 Female, age 85, both hemispheres 218.1
2455 Male, age 74, both hemispheres 189.6
2051 Male, age 76, both hemispheres 133.7
2328 Male, age 80, both hemispheres 132.4
2459 Female, age 91, both hemispheres 107.7
Nucleus raphe obscurus
nTPM: 97.0
2800 Male, age 61, midline 131.2
2845 Female, age 85, midline 108.5
2142 Male, age 76, midline 51.2
Nucleus raphe pallidus
nTPM: 105.9
2183 Male, age 80, midline 145.4
2145 Male, age 76, midline 88.7
1924 Male, age 61, midline 83.6
Nucleus tractus solitarii
nTPM: 137.7
2656 Male, age 76, both hemispheres 173.5
2144 Female, age 91, right hemisphere 159.3
2191 Female, age 85, both hemispheres 115.0
2307 Male, age 80, both hemispheres 103.0
Paramedian reticular nucleus
nTPM: 173.5
2050 Female, age 85, both hemispheres 199.7
2313 Male, age 61, both hemispheres 178.9
2057 Male, age 80, both hemispheres 176.6
2052 Male, age 76, both hemispheres 138.7
Parvicellular reticular nuclei
nTPM: 130.6
2095 Male, age 76, both hemispheres 141.8
2119 Male, age 80, both hemispheres 139.8
2558 Male, age 74, both hemispheres 110.0
Parvicellular reticular nuclei, medullary
nTPM: 188.6
2181 Male, age 80, left hemisphere 204.4
2189 Female, age 91, both hemispheres 188.0
2091 Female, age 85, both hemispheres 173.5
Pedunculopontine tegmental nucleus
nTPM: 172.8
1921 Female, age 85, both hemispheres 225.5
2334 Male, age 80, both hemispheres 158.4
2338 Male, age 61, both hemispheres 134.4
Peritrigeminal nucleus
nTPM: 154.2
2179 Male, age 61, both hemispheres 170.4
2136 Male, age 76, both hemispheres 148.3
2067 Female, age 85, both hemispheres 143.9
Pontine nuclei
nTPM: 167.0
2787 Female, age 85, both hemispheres 250.4
2727 Male, age 61, right hemisphere 227.7
1863 Male, age 55, unknown 211.7
2109 Female, age 72, unknown 164.7
1968 Male, age 76, left hemisphere 153.3
2454 Male, age 74, left hemisphere 123.5
2115 Male, age 80, left hemisphere 102.5
2319 Female, age 91, both hemispheres 102.2
Pontine raphe nucleus
nTPM: 190.8
2122 Female, age 85, midline 197.4
2853 Male, age 76, midline 184.2
Posteroventral cochlear nucleus
nTPM: 130.7
2752 Female, age 85, both hemispheres 217.1
2070 Male, age 76, both hemispheres 149.7
2371 Male, age 61, both hemispheres 122.0
2341 Male, age 80, both hemispheres 93.4
2135 Female, age 91, both hemispheres 71.3
Prepositus hypoglossal nucleus
nTPM: 157.8
2855 Female, age 85, right hemisphere 182.2
2086 Male, age 80, both hemispheres 133.5
Principal sensory trigeminal nucleus
nTPM: 163.8
2158 Male, age 61, both hemispheres 223.9
2008 Male, age 80, left hemisphere 166.9
2324 Male, age 76, both hemispheres 160.0
2367 Female, age 91, left hemisphere 104.2
Reticular pontine nucleus, caudal
nTPM: 125.1
2092 Male, age 76, both hemispheres 142.9
2332 Male, age 80, right hemisphere 141.7
2559 Male, age 74, both hemispheres 122.2
2457 Female, age 91, both hemispheres 93.6
Reticular pontine nucleus, oral
nTPM: 149.0
2012 Female, age 85, both hemispheres 179.0
2167 Male, age 76, both hemispheres 172.7
1939 Male, age 80, both hemispheres 162.3
2361 Male, age 74, both hemispheres 127.8
2366 Female, age 91, both hemispheres 103.2
Reticulotegmental nucleus
nTPM: 146.5
2325 Male, age 76, both hemispheres 178.6
2333 Male, age 80, both hemispheres 146.1
2322 Female, age 91, both hemispheres 142.2
2452 Male, age 74, both hemispheres 119.3
Spinal trigeminal nucleus, caudal
nTPM: 153.8
2390 Female, age 91, both hemispheres 212.3
2447 Male, age 76, both hemispheres 161.6
2642 Male, age 74, both hemispheres 133.5
2308 Male, age 80, both hemispheres 131.3
2312 Male, age 61, both hemispheres 130.0
Spinal trigeminal nucleus, interpolar
nTPM: 208.0
2625 Male, age 61, both hemispheres 255.3
2386 Female, age 85, both hemispheres 220.8
2066 Male, age 76, right hemisphere 206.0
2033 Male, age 80, both hemispheres 196.2
2389 Female, age 91, both hemispheres 161.5
Spinal trigeminal nucleus, oral
nTPM: 186.0
1978 Male, age 76, both hemispheres 210.2
2737 Female, age 85, both hemispheres 200.2
2164 Male, age 80, both hemispheres 147.6
Spinal vestibular nucleus
nTPM: 175.8
2186 Female, age 91, both hemispheres 205.9
2780 Male, age 80, both hemispheres 198.2
2806 Female, age 85, both hemispheres 193.9
2796 Male, age 61, both hemispheres 172.1
2748 Male, age 76, both hemispheres 161.9
2384 Male, age 74, both hemispheres 122.6
Subcoeruleus area
nTPM: 163.5
2323 Female, age 91, left hemisphere 209.2
1958 Male, age 80, both hemispheres 181.1
2451 Male, age 74, both hemispheres 150.2
2089 Male, age 76, left hemisphere 141.0
2369 Female, age 85, left hemisphere 135.9
Superior olive
nTPM: 148.0
1875 Female, age 85, both hemispheres 215.0
2364 Male, age 74, right hemisphere 150.4
2020 Male, age 76, both hemispheres 134.7
2329 Male, age 80, right hemisphere 122.9
2561 Female, age 91, both hemispheres 117.0
Superior vestibular nucleus
nTPM: 151.8
2383 Male, age 74, both hemispheres 160.7
2015 Male, age 80, both hemispheres 159.3
2061 Male, age 76, both hemispheres 135.3
Ventral medullary reticular nucleus
nTPM: 139.6
2060 Male, age 76, both hemispheres 167.2
2372 Male, age 61, both hemispheres 112.1
Ventral periolivary nuclei
nTPM: 149.4
2130 Female, age 85, both hemispheres 185.1
2165 Male, age 80, both hemispheres 159.1
2023 Male, age 76, both hemispheres 127.0
2794 Female, age 91, left hemisphere 126.3
Ventrolateral medulla, A1-C1 cell groups
nTPM: 135.9
2741 Female, age 85, both hemispheres 175.8
1986 Male, age 76, both hemispheres 162.5
2180 Male, age 61, both hemispheres 131.1
2302 Female, age 91, both hemispheres 124.6
2118 Male, age 80, both hemispheres 85.3
Ventrolateral tegmental area, A5 NE cell group
nTPM: 133.5
2840 Female, age 85, both hemispheres 178.6
2449 Male, age 74, both hemispheres 147.2
1959 Male, age 76, both hemispheres 144.8
2359 Male, age 61, both hemispheres 127.6
2161 Male, age 80, both hemispheres 118.5
2456 Female, age 91, both hemispheres 84.1

PONS AND MEDULLA - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 407.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Locus coeruleus
Scaled Tags Per Million: 188.2
FF:10165-103B3 76 years, female 189.3
FF:10182-103D2 60 years, female 187.1
Medulla oblongata
Scaled Tags Per Million: 213.0
FF:10038-101F2 18-64 years, mixed 269.8
FF:10174-103C3 60 years, female 195.4
FF:10155-103A2 76 years, female 173.7
Pons
Scaled Tags Per Million: 407.3
FF:10033-101E6 18-54 years, mixed 407.3

PONS AND MEDULLA - Pig RNA-seqi
Max subtype nTPMi 452.3
Pig sample Sample description nTPM
Medulla oblongata
nTPM: 388.3
Samples: 4

Max nTPM: 428.8
Min nTPM: 336.5
Sample A Female 336.5
Sample B Female 378.8
Sample C Male 428.8
Sample D Male 409.0
Pons
nTPM: 452.3
Samples: 4

Max nTPM: 559.4
Min nTPM: 352.2
Sample A Female 559.4
Sample B Female 352.2
Sample C Male 446.3
Sample D Male 451.1

PONS AND MEDULLA - Mouse RNA-seqi
Max subtype nTPMi 607.9
Mouse sample Sample description nTPM
Pons and medulla
nTPM: 607.9
Samples: 4

Max nTPM: 624.1
Min nTPM: 590.6
Sample A Male 609.6
Sample B Male 607.4
Sample C Female 624.1
Sample D Female 590.6

PONS AND MEDULLA - Allen Mouse ISHi
Max subtype Expression energyi 8.7
Allen experiment id Experiment description Expression energy
Medulla oblongata
Expression energy: 6.8
72718 Antisense, RP_040407_01_H11, Mouse strain C57BL/6J (56 days, male) 6.8
Pons
Expression energy: 8.7
72718 Antisense, RP_040407_01_H11, Mouse strain C57BL/6J (56 days, male) 8.7

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