HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: High
Neuronal cells: High
RNA expressioni
Consensus:302.0 nTPM
HPA Brain:151.5 nTPM
GTEx:302.0 nTPM
FANTOM5:197.1 Scaled Tags Per Million
Pig:15.2 nTPM
Mouse:875.9 nTPM
Allen mouse:3.1 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA058978Antibody HPA060520
Glial cells HighMedium
Neuronal cells HighMedium





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 151.5
Sample id Sample description nTPM
Hippocampus
nTPM: 110.5
1898 Male, age 80, left hemisphere 159.2
2621 Female, age 67, right hemisphere 112.1
2529 Female, age 94, left hemisphere 111.5
1855 Male, age 76, left hemisphere 102.1
1911 Female, age 85, right hemisphere 94.4
2148 Female, age 91, left hemisphere 83.9
Dentate gyrus
nTPM: 108.8
1927 Female, age 91, both hemispheres 138.6
2010 Male, age 76, both hemispheres 129.9
2246 Female, age 85, both hemispheres 103.9
2530 Female, age 94, left hemisphere 100.0
2528 Male, age 74, both hemispheres 93.6
2531 Female, age 67, both hemispheres 86.8
Entorhinal gyrus
nTPM: 103.5
2764 Male, age 80, right hemisphere 124.2
1938 Female, age 85, left hemisphere 120.8
1787 Male, age 76, left hemisphere 115.0
2613 Female, age 94, left hemisphere 91.6
2686 Male, age 75, right hemisphere 90.0
2117 Female, age 91, right hemisphere 79.1
Hippocampus, CA1
nTPM: 134.0
2749 Male, age 80, left hemisphere 237.8
2527 Male, age 74, both hemispheres 119.0
1873 Female, age 85, both hemispheres 118.0
2045 Male, age 76, both hemispheres 99.9
2082 Female, age 91, right hemisphere 95.3
Hippocampus, CA2
nTPM: 120.9
1963 Male, age 80, left hemisphere 164.8
1892 Male, age 76, both hemispheres 159.0
2249 Male, age 74, both hemispheres 115.7
2437 Female, age 94, left hemisphere 98.2
1940 Female, age 85, left hemisphere 97.2
2113 Female, age 91, right hemisphere 90.7
Hippocampus, CA3
nTPM: 117.7
2137 Male, age 80, left hemisphere 184.7
1867 Male, age 76, both hemispheres 141.8
2436 Male, age 74, both hemispheres 116.0
1891 Female, age 85, both hemispheres 100.6
2620 Female, age 94, left hemisphere 90.9
2861 Female, age 67, both hemispheres 71.9
Parahippocampal cortex
nTPM: 109.6
1850 Male, age 80, both hemispheres 163.1
1990 Female, age 91, right hemisphere 120.1
2250 Female, age 67, right hemisphere 118.6
2018 Male, age 76, both hemispheres 116.5
1933 Female, age 85, both hemispheres 113.5
2245 Female, age 91, both hemispheres 110.1
2693 Female, age 94, both hemispheres 98.7
2532 Female, age 72, left hemisphere 95.5
2692 Male, age 74, both hemispheres 81.6
2622 Female, age 67, right hemisphere 78.9
Perirhinal gyrus
nTPM: 151.5
1847 Female, age 91, left hemisphere 184.1
1794 Male, age 80, right hemisphere 183.4
1841 Female, age 85, right hemisphere 160.8
2848 Male, age 76, right hemisphere 114.9
2521 Female, age 94, right hemisphere 113.9
Subiculum
nTPM: 101.6
1901 Male, age 80, both hemispheres 121.0
1977 Female, age 85, both hemispheres 113.3
2438 Female, age 94, left hemisphere 105.2
2042 Male, age 76, both hemispheres 98.2
2619 Male, age 74, both hemispheres 90.6
2729 Female, age 91, right hemisphere 81.3

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 302.0
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 302.0
Samples: 197

Max nTPM: 1015.6
Min nTPM: 109.7
Std nTPM: 127.4
Median nTPM: 283.8
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 1015.6
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 726.4
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 674.7
GTEX-13NYB-0011-R1b-SM-5KM4F 40-49 years, male 671.0
GTEX-1F75A-0011-R1b-SM-CE6RA 50-59 years, male 650.6
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 648.1
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 602.0
GTEX-1GMR8-0011-R1b-SM-CJI2O 50-59 years, female 582.3
GTEX-14PN4-0011-R1b-SM-69LP8 50-59 years, male 565.0
GTEX-1CB4G-0011-R1b-SM-9QEHT 60-69 years, male 552.8
GTEX-17HG3-0011-R1a-SM-7LG6H 30-39 years, female 509.4
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 197.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 197.1
FF:10169-103B7 60 years, female 265.8
FF:10153-102I9 76 years, female 128.3

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 15.2
Pig sample Sample description nTPM
Subiculum
nTPM: 12.1
Samples: 4

Max nTPM: 12.7
Min nTPM: 11.0
Sample A Female 12.3
Sample B Female 12.7
Sample C Male 11.0
Sample D Male 12.4
Dorsal hippocampus
nTPM: 15.2
Samples: 4

Max nTPM: 17.3
Min nTPM: 13.7
Sample A Female 17.3
Sample B Female 14.7
Sample C Male 13.7
Sample D Male 15.1
Entorhinal cortex
nTPM: 14.9
Samples: 4

Max nTPM: 18.0
Min nTPM: 13.3
Sample A Female 13.3
Sample B Female 18.0
Sample C Male 14.4
Sample D Male 13.9
Ventral hippocampus
nTPM: 13.5
Samples: 4

Max nTPM: 14.5
Min nTPM: 12.8
Sample A Female 14.5
Sample B Female 13.2
Sample C Male 12.8
Sample D Male 13.6

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 875.9
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 802.2
Samples: 4

Max nTPM: 874.2
Min nTPM: 750.0
Sample A Male 750.0
Sample B Male 798.7
Sample C Female 874.2
Sample D Female 785.7
Hippocampal formation
nTPM: 875.9
Samples: 4

Max nTPM: 1014.9
Min nTPM: 772.9
Sample A Male 1014.9
Sample B Male 772.9
Sample C Female 882.5
Sample D Female 833.2

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 3.1
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 3.1
69116709 Antisense, RP_050321_01_A05, Mouse strain C57BL/6J (56 days, male) 3.1

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