We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
EIF4A2
HPA
RESOURCES
  • TISSUE
  • BRAIN
  • SINGLE CELL
  • SUBCELLULAR
  • CANCER
  • BLOOD
  • CELL LINE
  • STRUCTURE & INTERACTION
ABOUT
  • INTRODUCTION
  • HISTORY
  • ORGANIZATION
  • PUBLICATIONS
  • ANTIBODY SUBMISSION
  • ANTIBODY AVAILABILITY
  • ACKNOWLEDGMENTS
  • CONTACT
NEWS
  • NEWS ARTICLES
  • PRESS ROOM
LEARN
  • DICTIONARY
  • PROTEIN CLASSES
  • PROTEIN EVIDENCE
  • METHODS
  • EDUCATIONAL VIDEOS
DATA
  • DOWNLOADABLE DATA
  • PUBLICATION DATA
  • RELEASE HISTORY
HELP
  • ANTIBODY VALIDATION
  • ASSAYS & ANNOTATION
  • DISCLAIMER
  • HELP & FAQ
  • PRIVACY STATEMENT
  • LICENCE & CITATION
Fields »
Search result

Field
Term
Gene name
Class
Subclass
Class
Keyword
Chromosome
External id
Tissue
Cell type
Expression
Antibody panel
Tissue
Main location
Patient ID
Annotation
Tissue
Category
Tau score
Cluster
Reliability
Brain region
Category
Tau score
Brain region
Category
Tau score
Brain region
Category
Tau score
Cluster
Reliability
Tissue
Cell type
Enrichment
Cell type
Category
Tau score
Cell type
Category
Tau score
Cell type
Category
Tau score
Cell lineage
Category
Tau score
Cluster
Cluster
Location
Searches
Location
Cell line
Class
Type
Phase
Reliability
Cancer
Prognosis
Cancer
Category
Cancer
Category
Tau score
Cluster
Variants
Interacting gene (ensg_id)
Type
Number of interactions
Pathway
Category
Score
Score
Score
Validation
Validation
Validation
Validation
Antibodies
Data type
Column


  • SUMMARY

  • TISSUE

  • BRAIN

  • SINGLE CELL

  • SUBCELL

  • CANCER

  • BLOOD

  • CELL LINE

  • STRUCT & INT

  • EIF4A2
BRAIN BASAL GANGLIA Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS MEDULLA OBLONGATA
MIDBRAIN OLFACTORY BULB PITUITARY GLAND PONS RETINA SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
AND
VALIDATION
Brain proteome
Basal ganglia
BASAL GANGLIA - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glial cells: High
Neuronal cells: High
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:308.3 nTPM
HPA Brain:300.6 nTPM
GTEx:308.3 nTPM
FANTOM5:866.6 Scaled Tags Per Million
Mouse:664.6 nTPM
Allen mouse:22.8 Expression energy

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody CAB011690
Glial cells High
Neuronal cells High



BASAL GANGLIA - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

300.6
Sample id Sample description nTPM
Caudate nucleus
nTPM: 260.0
2846 Female, age 79, unknown 365.1
2481 Female, age 94, left hemisphere 293.7
1781 Male, age 74, unknown 266.8
2290 Female, age 72, unknown 260.7
1854 Male, age 80, left hemisphere 250.5
1857 Female, age 85, left hemisphere 243.3
2288 Male, age 75, left hemisphere 240.8
2289 Male, age 61, right hemisphere 159.2
Globus pallidus, externus
nTPM: 154.1
2395 Male, age 75, both hemispheres 230.3
2772 Female, age 79, unknown 223.0
1996 Male, age 80, right hemisphere 142.1
2646 Male, age 61, right hemisphere 110.2
2567 Female, age 72, unknown 64.7
Globus pallidus, internus
nTPM: 160.7
2287 Male, age 75, right hemisphere 271.8
2483 Female, age 94, right hemisphere 244.0
2778 Female, age 91, both hemispheres 180.6
1818 Male, age 74, unknown 141.5
2037 Male, age 80, right hemisphere 133.2
2566 Female, age 72, unknown 86.1
2111 Female, age 85, right hemisphere 68.0
Nucleus accumbens
nTPM: 260.4
1856 Female, age 91, right hemisphere 350.3
2391 Female, age 94, left hemisphere 293.2
1783 Male, age 74, unknown 290.3
2698 Female, age 72, unknown 258.6
2286 Male, age 75, left hemisphere 257.5
2824 Male, age 61, right hemisphere 239.8
1806 Female, age 85, left hemisphere 233.9
2732 Male, age 80, right hemisphere 159.4
Nucleus basalis of Meynert
nTPM: 202.5
2821 Male, age 75, both hemispheres 244.0
2484 Female, age 94, left hemisphere 237.1
2393 Male, age 80, right hemisphere 219.5
2569 Male, age 61, both hemispheres 109.5
Nucleus of the diagonal band
nTPM: 300.6
2775 Male, age 80, right hemisphere 380.9
1812 Female, age 91, both hemispheres 366.0
2195 Female, age 85, both hemispheres 295.8
2029 Male, age 61, right hemisphere 246.6
1979 Male, age 74, unknown 213.8
Putamen
nTPM: 253.9
2466 Female, age 79, unknown 377.4
1838 Male, age 80, right hemisphere 306.6
2482 Female, age 94, left hemisphere 283.6
1937 Female, age 91, right hemisphere 266.4
1829 Male, age 74, unknown 246.6
2647 Male, age 75, left hemisphere 157.5
2489 Female, age 72, unknown 139.2
Septal nuclei
nTPM: 248.8
2031 Female, age 72, unknown 408.4
1960 Male, age 74, unknown 314.1
2009 Female, age 91, both hemispheres 282.1
2629 Female, age 94, right hemisphere 235.6
2199 Male, age 80, right hemisphere 176.6
2394 Male, age 61, left hemisphere 165.3
2059 Female, age 85, both hemispheres 159.7
Stria terminalis, bed nucleus
nTPM: 249.8
1974 Female, age 91, both hemispheres 348.1
2486 Female, age 94, both hemispheres 216.0
2201 Male, age 74, unknown 185.3

BASAL GANGLIA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

308.3
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 273.7
Samples: 246

Max nTPM: 845.1
Min nTPM: 81.0
Std nTPM: 121.9
Median nTPM: 250.7
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 845.1
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 760.7
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 657.4
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 624.4
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 591.7
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 528.7
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 527.6
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 518.9
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 514.7
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 510.9
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 491.3
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 488.3
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 488.0
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 486.5
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 485.9
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 468.3
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 463.8
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 463.2
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 456.6
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 456.6
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 456.4
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 456.2
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 446.7
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 438.7
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 438.6
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 433.0
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 429.8
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 428.5
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 426.5
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 426.4
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 425.8
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 424.6
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 422.1
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 416.0
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 412.1
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 410.2
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 408.4
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 405.1
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 391.7
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 389.9
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 389.9
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 382.1
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 379.7
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 378.3
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 377.4
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 376.9
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 374.8
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 374.5
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 374.0
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 373.1
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 368.0
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 362.0
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 360.6
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 357.8
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 354.9
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 353.7
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 352.8
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 351.6
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 349.4
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 347.2
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 344.9
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 343.1
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 340.9
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 336.5
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 335.2
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 334.6
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 333.5
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 333.0
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 333.0
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 330.7
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 329.4
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 322.4
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 321.9
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 319.9
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 318.6
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 316.8
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 314.5
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 313.6
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 313.5
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 311.4
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 310.5
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 309.1
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 308.0
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 306.5
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 303.1
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 302.5
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 302.1
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 300.1
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 298.8
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 297.7
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 294.9
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 294.7
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 293.2
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 291.3
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 288.4
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 287.8
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 286.2
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 285.8
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 285.4
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 284.1
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 283.4
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 282.5
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 279.2
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 277.1
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 276.7
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 275.9
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 274.8
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 272.8
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 272.8
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 271.7
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 271.2
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 270.1
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 268.2
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 267.9
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 266.3
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 263.1
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 261.1
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 258.6
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 256.8
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 255.0
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 254.6
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 253.8
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 251.3
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 250.1
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 250.0
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 247.6
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 247.4
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 245.7
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 244.8
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 241.2
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 240.7
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 240.5
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 236.9
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 235.0
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 233.5
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 231.2
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 231.0
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 230.6
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 228.9
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 225.7
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 224.3
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 223.4
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 223.2
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 221.9
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 221.1
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 220.4
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 220.4
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 218.2
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 218.0
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 216.9
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 215.4
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 213.1
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 212.4
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 212.3
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 212.2
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 211.3
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 211.1
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 210.0
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 209.8
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 207.4
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 207.3
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 206.7
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 206.6
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 203.9
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 200.8
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 200.1
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 196.0
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 195.8
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 195.5
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 195.2
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 195.0
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 194.4
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 192.4
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 191.4
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 190.9
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 190.1
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 189.5
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 189.0
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 188.8
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 184.7
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 183.7
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 183.2
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 183.2
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 182.3
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 177.2
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 175.2
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 174.6
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 172.4
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 171.0
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 170.9
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 169.7
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 169.6
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 169.5
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 169.4
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 169.3
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 169.2
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 168.6
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 168.3
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 168.2
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 163.8
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 163.7
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 163.5
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 161.7
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 160.3
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 160.1
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 158.6
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 155.6
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 154.8
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 153.7
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 153.1
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 152.6
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 151.7
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 150.4
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 150.2
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 149.7
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 148.9
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 147.5
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 146.5
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 145.4
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 145.0
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 144.9
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 144.7
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 143.4
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 143.0
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 139.8
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 138.1
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 136.7
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 135.6
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 131.4
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 130.6
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 130.4
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 129.9
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 128.9
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 128.6
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 126.8
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 124.2
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 119.6
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 118.8
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 118.4
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 113.7
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 113.0
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 100.3
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 98.4
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 95.9
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 84.9
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 81.0
Show allShow less
Brain - Nucleus accumbens (basal ganglia)
Average nTPM: 308.3
Samples: 246

Max nTPM: 712.5
Min nTPM: 34.6
Std nTPM: 132.0
Median nTPM: 319.1
GTEX-1LVAO-0011-R6b-SM-EZ6MX 60-69 years, male 712.5
GTEX-1B8L1-0011-R6b-SM-7P8SU 60-69 years, male 576.8
GTEX-NL3H-0011-R6a-SM-2I3G8 60-69 years, male 570.2
GTEX-1OJC4-0011-R6a-SM-EXOIM 50-59 years, female 554.9
GTEX-13X6J-0011-R6a-SM-5PNUB 50-59 years, male 537.3
GTEX-11DZ1-0011-R6b-SM-DNZZG 50-59 years, male 534.0
GTEX-1A3MX-0011-R6a-SM-7P8S9 60-69 years, male 531.2
GTEX-1EKGG-0011-R6a-SM-CL538 60-69 years, male 518.5
GTEX-1313W-0011-R6a-SM-5K7XO 50-59 years, female 516.7
GTEX-UTHO-0011-R6A-SM-3GIJW 60-69 years, male 516.3
GTEX-18464-0011-R6a-SM-731CA 50-59 years, male 516.1
GTEX-QMR6-0011-R6A-SM-32PKP 50-59 years, male 507.0
GTEX-1JMLX-0011-R6b-SM-EXUT9 50-59 years, male 506.6
GTEX-NPJ7-0011-R6a-SM-2I3G7 60-69 years, female 505.3
GTEX-Z93S-0011-R6b-SM-4RGNJ 50-59 years, male 495.3
GTEX-16YQH-0011-R6b-SM-7938T 30-39 years, male 493.5
GTEX-1ICLZ-0011-R6b-SM-A9G3A 60-69 years, male 493.5
GTEX-N7MS-0011-R6a-SM-2HMJ4 60-69 years, male 491.0
GTEX-15ER7-0011-R6a-SM-6M46M 20-29 years, female 490.0
GTEX-14BIN-0011-R6a-SM-5S2RH 50-59 years, female 485.8
GTEX-T2IS-0011-R6A-SM-32QP2 20-29 years, female 484.7
GTEX-1HT8W-0011-R6a-SM-CM2SY 30-39 years, male 484.5
GTEX-1F75A-0011-R6b-SM-9QEHD 50-59 years, male 483.8
GTEX-NPJ8-0011-R6a-SM-2HMKB 40-49 years, male 483.7
GTEX-13O3Q-0011-R6a-SM-5KM2V 50-59 years, male 482.8
GTEX-1I1CD-0011-R6b-SM-CJI3Y 60-69 years, female 482.8
GTEX-1F7RK-0011-R6b-SM-ARZMG 20-29 years, female 480.2
GTEX-145LS-0011-R6b-SM-5PNWL 60-69 years, female 475.5
GTEX-13NYS-0011-R6b-SM-5MR3R 60-69 years, male 475.4
GTEX-14PJM-0011-R6a-SM-6872G 50-59 years, female 475.3
GTEX-13VXU-0011-R6a-SM-5SI71 50-59 years, male 470.7
GTEX-14E7W-0011-R6b-SM-5ZZV3 70-79 years, male 470.6
GTEX-14JIY-0011-R6b-SM-68714 60-69 years, male 469.2
GTEX-13RTJ-0011-R6a-SM-5SI74 60-69 years, male 467.5
GTEX-131XH-0011-R6a-SM-5KM2G 50-59 years, male 467.0
GTEX-1B933-0011-R6b-SM-79OOQ 50-59 years, female 467.0
GTEX-1I1GR-0011-R6a-SM-CMKHI 60-69 years, male 466.0
GTEX-1HB9E-0011-R6b-SM-A9G1P 50-59 years, male 465.4
GTEX-145MH-0011-R6a-SM-5PNZ7 50-59 years, male 465.0
GTEX-11DXY-0011-R6a-SM-DNZZF 60-69 years, male 461.4
GTEX-12WSC-0011-R6b-SM-5LU99 50-59 years, male 460.8
GTEX-QVJO-0011-R6A-SM-2S1QN 60-69 years, female 459.4
GTEX-17EVP-0011-R6b-SM-7LT99 40-49 years, male 458.7
GTEX-1EMGI-0011-R6a-SM-9OSVR 60-69 years, male 458.4
GTEX-XLM4-0011-R6A-SM-4AT4B 60-69 years, male 453.1
GTEX-1F75W-0011-R6a-SM-9QEI5 60-69 years, male 453.1
GTEX-1AX9I-0011-R6a-SM-7P8PK 60-69 years, male 452.6
GTEX-14C5O-0011-R6a-SM-5YYB6 60-69 years, male 452.4
GTEX-11OF3-0011-R6b-SM-57WBG 60-69 years, male 446.1
GTEX-Q2AG-0011-R6A-SM-2HML7 40-49 years, female 441.9
GTEX-WWYW-0011-R6A-SM-3NB3G 50-59 years, female 439.6
GTEX-1GZ4I-0011-R6b-SM-9WG77 50-59 years, male 439.5
GTEX-14BIM-0011-R6b-SM-5S2VB 60-69 years, female 437.9
GTEX-X585-0011-R6A-SM-46MVJ 50-59 years, male 435.6
GTEX-T6MN-0011-R6A-SM-32QP8 50-59 years, male 434.2
GTEX-13FLW-0011-R6b-SM-5L3EN 50-59 years, male 432.1
GTEX-15CHQ-0011-R6b-SM-69LOX 60-69 years, male 431.7
GTEX-11NV4-0011-R6a-SM-57WD5 60-69 years, male 425.7
GTEX-TSE9-0011-R6A-SM-3DB7L 60-69 years, female 423.3
GTEX-14BMV-0011-R6b-SM-5YY9I 50-59 years, male 420.9
GTEX-1F6IF-0011-R6a-SM-9QEIO 60-69 years, male 415.8
GTEX-1C6WA-0011-R6a-SM-7PBYP 60-69 years, male 415.2
GTEX-1MJK2-0011-R6a-SM-EXUS3 50-59 years, male 412.1
GTEX-T5JC-0011-R6A-SM-D3L87 20-29 years, male 407.1
GTEX-132Q8-0011-R6a-SM-5K7YN 60-69 years, male 402.2
GTEX-1I1GV-0011-R6b-SM-ARU6Q 60-69 years, male 397.2
GTEX-XMD1-0011-R6A-SM-4AT5K 60-69 years, male 396.6
GTEX-1GF9W-0011-R6b-SM-9QEIE 60-69 years, male 392.7
GTEX-12ZZX-0011-R6a-SM-5HL8L 40-49 years, female 392.5
GTEX-14JG1-0011-R6b-SM-5YYAU 40-49 years, male 390.1
GTEX-139TT-0011-R6b-SM-5J2ON 60-69 years, male 389.9
GTEX-17HG3-0011-R6b-SM-79OK8 30-39 years, female 389.4
GTEX-1HGF4-0011-R6a-SM-A96S1 60-69 years, male 386.8
GTEX-13X6K-0011-R6a-SM-5P9K6 60-69 years, female 385.5
GTEX-S7SE-0011-R6A-SM-2XCD9 50-59 years, male 385.0
GTEX-12WSD-0011-R6b-SM-5P9JU 60-69 years, female 384.5
GTEX-13OVL-0011-R6a-SM-5L3G4 50-59 years, male 384.1
GTEX-1H1DG-0011-R6a-SM-A9SK8 70-79 years, male 383.9
GTEX-1IDJH-0011-R6a-SM-A9SLZ 70-79 years, male 382.3
GTEX-14ABY-0011-R6a-SM-5PNWR 50-59 years, male 379.8
GTEX-1IY9M-0011-R6a-SM-D4P28 60-69 years, male 377.1
GTEX-1HBPH-0011-R6a-SM-CKZOV 40-49 years, female 374.9
GTEX-1B8SF-0011-R6b-SM-7MXUD 60-69 years, male 374.0
GTEX-1GZ2Q-0011-R6a-SM-9OSWM 40-49 years, male 373.9
GTEX-WZTO-0011-R6B-SM-4E3J6 40-49 years, male 372.8
GTEX-12ZZZ-0011-R6b-SM-5EQ5B 60-69 years, male 371.7
GTEX-1H1CY-0011-R6b-SM-CE6RP 60-69 years, female 369.1
GTEX-1HR9M-0011-R6a-SM-ARU6Z 60-69 years, male 367.6
GTEX-1LH75-0011-R6a-SM-EXURS 50-59 years, female 367.3
GTEX-1EX96-0011-R6a-SM-9OSVV 50-59 years, male 365.5
GTEX-13G51-0011-R6b-SM-5LZX4 60-69 years, male 364.8
GTEX-R55E-0011-R6A-SM-2TC5T 20-29 years, male 363.1
GTEX-1GN73-0011-R6b-SM-CJI2T 60-69 years, male 361.3
GTEX-P44G-0011-R6A-SM-2XCD3 30-39 years, male 361.0
GTEX-X4XX-0011-R6B-SM-46MWP 60-69 years, male 360.5
GTEX-147GR-0011-R6b-SM-5S2RO 60-69 years, male 358.9
GTEX-13OW6-0011-R6b-SM-5L3GR 50-59 years, male 358.8
GTEX-1F6I4-0011-R6a-SM-CE6R4 60-69 years, male 354.5
GTEX-1H3NZ-0011-R6b-SM-A9G1N 60-69 years, male 354.4
GTEX-WHSE-0011-R6A-SM-3P5ZP 20-29 years, male 354.1
GTEX-1GTWX-0011-R6a-SM-A96RN 60-69 years, male 353.7
GTEX-11NUK-0011-R6a-SM-DO93O 50-59 years, male 352.1
GTEX-1192X-0011-R6a-SM-DNZZB 50-59 years, male 352.0
GTEX-N7MT-0011-R6a-SM-2I3G3 60-69 years, female 351.9
GTEX-1GF9V-0011-R6b-SM-CJI2Q 60-69 years, male 351.3
GTEX-12ZZY-0011-R6b-SM-5EGLA 60-69 years, male 347.0
GTEX-12WSF-0011-R6b-SM-5HL8W 70-79 years, male 345.6
GTEX-ZXG5-0011-R6a-SM-57WBZ 60-69 years, male 343.0
GTEX-13NYB-0011-R6b-SM-5MR51 40-49 years, male 341.8
GTEX-17F97-0011-R6a-SM-7EPGS 50-59 years, male 340.2
GTEX-1CB4G-0011-R6b-SM-9QEGO 60-69 years, male 339.0
GTEX-12WSH-0011-R6b-SM-5P9F4 50-59 years, male 336.8
GTEX-11PRG-0011-R6b-SM-DO923 50-59 years, male 334.4
GTEX-14LZ3-0011-R6a-SM-D3L8C 60-69 years, female 334.2
GTEX-1C6VR-0011-R6a-SM-7MXU8 60-69 years, male 331.3
GTEX-14PN4-0011-R6b-SM-69LQU 50-59 years, male 327.3
GTEX-13FHO-0011-R6b-SM-5LZX1 60-69 years, male 326.8
GTEX-15DCD-0011-R6b-SM-6M46L 70-79 years, female 324.7
GTEX-ZVZQ-0011-R6b-SM-57WAY 60-69 years, female 324.4
GTEX-147F4-0011-R6b-SM-5S2UP 50-59 years, male 324.0
GTEX-WL46-0011-R6A-SM-3LK6X 50-59 years, male 322.7
GTEX-13SLX-0011-R6a-SM-5PNX4 50-59 years, female 319.2
GTEX-1GN1U-0011-R6a-SM-CKZNO 50-59 years, female 319.1
GTEX-18A6Q-0011-R6a-SM-7LG6R 60-69 years, male 319.0
GTEX-ZE9C-0011-R6a-SM-4WWCW 60-69 years, male 318.6
GTEX-144GL-0011-R6a-SM-5P9HW 50-59 years, male 318.5
GTEX-14ASI-0011-R6a-SM-5S2UZ 60-69 years, male 309.4
GTEX-NL4W-0011-R6a-SM-2I3GA 50-59 years, male 309.2
GTEX-183WM-0011-R6b-SM-72D66 70-79 years, female 307.5
GTEX-15DYW-0011-R6b-SM-6PALA 60-69 years, female 303.5
GTEX-15RJE-0011-R6a-SM-7DHL8 40-49 years, male 303.5
GTEX-1GMR8-0011-R6b-SM-CE6RC 50-59 years, female 302.0
GTEX-ZF28-0011-R6a-SM-4WKHI 60-69 years, male 300.2
GTEX-1I1GQ-0011-R6b-SM-CE6SE 50-59 years, male 297.3
GTEX-ZDXO-0011-R6a-SM-4WWCT 60-69 years, male 294.8
GTEX-13112-0011-R6b-SM-5DUVK 50-59 years, male 289.0
GTEX-13O3O-0011-R6b-SM-5P9GY 60-69 years, female 288.6
GTEX-WVLH-0011-R6A-SM-3MJFZ 50-59 years, male 287.1
GTEX-1399T-0011-R6b-SM-5K7YL 60-69 years, male 286.7
GTEX-13FXS-0011-R6b-SM-5L3F7 50-59 years, male 286.7
GTEX-11TTK-0011-R6b-SM-DNZZW 60-69 years, female 271.5
GTEX-11DYG-0011-R6a-SM-DO936 60-69 years, male 268.7
GTEX-1MA7X-0011-R6a-SM-EYYWR 60-69 years, male 267.2
GTEX-14PQA-0011-R6b-SM-6AJAM 50-59 years, female 266.8
GTEX-1HUB1-0011-R6b-SM-ARU6W 60-69 years, male 266.5
GTEX-1LVA9-0011-R6a-SM-EYYWH 50-59 years, male 263.2
GTEX-Y8DK-0011-R6A-SM-4V6EG 60-69 years, male 261.5
GTEX-1HBPI-0011-R6b-SM-A9G1T 50-59 years, male 261.0
GTEX-17HHY-0011-R6b-SM-7189Z 50-59 years, male 259.9
GTEX-1J8Q2-0011-R6a-SM-CKZPG 60-69 years, male 256.7
GTEX-QVUS-0011-R6A-SM-3GACX 60-69 years, female 253.8
GTEX-13S7M-0011-R6b-SM-5O9D8 60-69 years, female 250.6
GTEX-13OW5-0011-R6b-SM-5O9BW 60-69 years, male 247.0
GTEX-1J1OQ-0011-R6a-SM-ARU86 40-49 years, female 245.8
GTEX-15G19-0011-R6b-SM-7KUM3 60-69 years, male 243.6
GTEX-11O72-0011-R6a-SM-DNZZQ 40-49 years, male 242.7
GTEX-1F75B-0011-R6a-SM-ARZMI 50-59 years, male 235.3
GTEX-1H1ZS-0011-R6b-SM-A9G1F 70-79 years, male 232.8
GTEX-1N2DW-0011-R6a-SM-EZ6MW 50-59 years, male 232.6
GTEX-11DXW-0011-R6a-SM-DO11N 40-49 years, male 232.0
GTEX-RU72-0011-R6A-SM-2TF71 50-59 years, female 230.7
GTEX-1HFI6-0011-R6b-SM-CM2SR 40-49 years, male 230.5
GTEX-12WSE-0011-R6b-SM-5LZV5 20-29 years, male 228.2
GTEX-13N2G-0011-R6b-SM-5MR3P 60-69 years, male 227.7
GTEX-1B996-0011-R6b-SM-793AQ 60-69 years, male 227.5
GTEX-13FLV-0011-R6a-SM-5KLZ4 50-59 years, male 224.0
GTEX-145MI-0011-R6a-SM-5PNZA 60-69 years, female 222.4
GTEX-13QJC-0011-R6a-SM-5S2VI 60-69 years, female 222.1
GTEX-PWO3-0011-R6A-SM-2I5F3 60-69 years, female 222.0
GTEX-13SLW-0011-R6a-SM-5O9BH 70-79 years, male 221.2
GTEX-1BAJH-0011-R6b-SM-7MXT2 70-79 years, male 219.3
GTEX-1I19N-0011-R6b-SM-CY8GC 70-79 years, male 219.0
GTEX-13PDP-0011-R6b-SM-5O9D5 60-69 years, male 218.5
GTEX-1JJEA-0011-R6a-SM-EXUS1 60-69 years, male 215.4
GTEX-13JUV-0011-R6b-SM-5LZYG 40-49 years, female 213.7
GTEX-1F48J-0011-R6a-SM-CJI2F 50-59 years, female 213.5
GTEX-YFC4-0011-R6b-SM-4V6E1 40-49 years, female 211.6
GTEX-ZAB4-0011-R6a-SM-4SOKD 40-49 years, male 207.8
GTEX-ZUA1-0011-R6b-SM-4YCDD 40-49 years, male 207.4
GTEX-YJ89-0011-R6a-SM-4V6GN 60-69 years, male 205.7
GTEX-1E1VI-0011-R6a-SM-9OSVJ 50-59 years, male 205.2
GTEX-11ONC-0011-R6a-SM-DO12A 60-69 years, male 204.6
GTEX-144GO-0011-R6b-SM-5S2V7 60-69 years, male 203.5
GTEX-1LC47-0011-R6b-SM-EZ6MI 60-69 years, male 202.9
GTEX-17JCI-0011-R6a-SM-72D6D 60-69 years, female 195.3
GTEX-17MF6-0011-R6b-SM-7LG6G 40-49 years, male 194.8
GTEX-1CB4H-0011-R6b-SM-CKZNK 60-69 years, female 194.7
GTEX-11WQC-0011-R6a-SM-5BC77 60-69 years, male 194.2
GTEX-1IKK5-0011-R6b-SM-A9SLY 60-69 years, male 192.6
GTEX-X4EP-0011-R6A-SM-3P629 60-69 years, female 191.6
GTEX-12ZZW-0011-R6a-SM-5DUVZ 50-59 years, male 190.8
GTEX-X4XY-0011-R6B-SM-46MVB 60-69 years, male 187.5
GTEX-1445S-0011-R6b-SM-5PNUF 60-69 years, male 186.4
GTEX-S7PM-0011-R6A-SM-3NM8F 60-69 years, male 181.9
GTEX-18465-0011-R6a-SM-7LG6M 50-59 years, male 181.7
GTEX-11GSP-0011-R6b-SM-57WBQ 60-69 years, female 175.3
GTEX-ZVT3-0011-R6a-SM-51MSU 60-69 years, female 174.0
GTEX-1GN2E-0011-R6b-SM-9QEII 60-69 years, male 171.0
GTEX-1H3VE-0011-R6b-SM-A9G1M 40-49 years, male 170.9
GTEX-1EH9U-0011-R6a-SM-CJI2C 60-69 years, male 170.5
GTEX-13PL6-0011-R6a-SM-5O9C5 40-49 years, female 170.3
GTEX-13OW8-0011-R6b-SM-5L3I3 60-69 years, male 164.7
GTEX-13N1W-0011-R6a-SM-5MR43 70-79 years, male 164.3
GTEX-1IKOH-0011-R6b-SM-A9G1W 60-69 years, female 164.1
GTEX-1IL2U-0011-R6a-SM-ARZLG 60-69 years, male 163.7
GTEX-13OVJ-0011-R6b-SM-5L3GH 50-59 years, female 160.1
GTEX-15EO6-0011-R6a-SM-7KULK 50-59 years, male 156.7
GTEX-ZE7O-0011-R6a-SM-57WCI 50-59 years, female 156.2
GTEX-QDT8-0011-R6A-SM-32PKI 30-39 years, female 155.4
GTEX-1HBPM-0011-R6b-SM-ARU73 60-69 years, female 143.6
GTEX-1H4P4-0011-R6a-SM-ARZLR 50-59 years, male 143.5
GTEX-ZV68-0011-R6a-SM-51MSR 50-59 years, female 142.9
GTEX-16Z82-0011-R6a-SM-7IGLV 60-69 years, male 141.1
GTEX-X261-0011-R6B-SM-4E3J8 50-59 years, male 139.7
GTEX-1IGQW-0011-R6a-SM-CM2TC 60-69 years, male 139.2
GTEX-1H3O1-0011-R6b-SM-CL54U 60-69 years, male 138.1
GTEX-139TS-0011-R6a-SM-5J2OB 60-69 years, male 137.4
GTEX-16XZZ-0011-R6a-SM-7IGNE 60-69 years, male 136.9
GTEX-13JVG-0011-R6a-SM-5MR3E 60-69 years, male 133.0
GTEX-1A8G6-0011-R6b-SM-7P8PE 60-69 years, male 132.2
GTEX-1C64N-0011-R6a-SM-7IGO9 50-59 years, male 132.0
GTEX-13OVH-0011-R6b-SM-5LUAX 70-79 years, male 131.5
GTEX-12WSM-0011-R6b-SM-5EQ6N 60-69 years, male 131.4
GTEX-1F88E-0011-R6a-SM-CKZNW 60-69 years, female 130.2
GTEX-1EN7A-0011-R6b-SM-9QEHW 40-49 years, male 126.7
GTEX-131XW-0011-R6b-SM-5K7XY 50-59 years, female 126.2
GTEX-13FHP-0011-R6b-SM-5LZY6 50-59 years, male 124.8
GTEX-1LB8K-0011-R6a-SM-EXURT 50-59 years, male 121.1
GTEX-1H23P-0011-R6b-SM-A9G1H 60-69 years, male 118.2
GTEX-1GZHY-0011-R6a-SM-9OSWL 50-59 years, female 117.1
GTEX-1I1HK-0011-R6b-SM-CM2T9 60-69 years, male 117.1
GTEX-1I1GS-0011-R6b-SM-CMKHE 60-69 years, male 114.9
GTEX-OHPN-0011-R6A-SM-2I5FH 60-69 years, female 114.6
GTEX-13IVO-0011-R6b-SM-5K7X9 70-79 years, male 112.1
GTEX-145LU-0011-R6a-SM-5S2V6 50-59 years, male 106.4
GTEX-P44H-0011-R6A-SM-2XCF3 40-49 years, male 104.6
GTEX-1E2YA-0011-R6b-SM-CE6R2 50-59 years, male 103.4
GTEX-14PHW-0011-R6b-SM-5YYAR 60-69 years, female 99.3
GTEX-1EWIQ-0011-R6a-SM-ARU8G 70-79 years, female 95.5
GTEX-1GMRU-0011-R6b-SM-A9G3B 50-59 years, male 94.7
GTEX-17EVQ-0011-R6a-SM-7189U 70-79 years, male 90.8
GTEX-1R46S-0011-R6a-SM-EZ6N6 60-69 years, female 69.8
GTEX-1CB4J-0011-R6b-SM-9WG7B 60-69 years, male 65.1
GTEX-12584-0011-R6a-SM-5NQ7C 40-49 years, male 64.8
GTEX-1RLM8-0011-R6a-SM-EYYXS 50-59 years, male 58.1
GTEX-14753-0011-R6b-SM-5S2UD 60-69 years, male 34.6
Show allShow less
Brain - Putamen (basal ganglia)
Average nTPM: 243.7
Samples: 205

Max nTPM: 604.9
Min nTPM: 87.6
Std nTPM: 104.6
Median nTPM: 216.8
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 604.9
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 555.5
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 494.3
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 468.4
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 466.6
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 466.3
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 458.5
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 448.4
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 446.3
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 445.2
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 444.8
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 439.1
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 431.4
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 429.3
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 425.3
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 424.8
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 424.1
GTEX-QVJO-0011-R7A-SM-2S1QO 60-69 years, female 421.8
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 410.9
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 407.9
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 406.9
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 406.8
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 403.4
GTEX-S7SE-0011-R7A-SM-2XCDI 50-59 years, male 402.8
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 402.4
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 401.7
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 397.7
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 397.2
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 394.3
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 393.8
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 388.8
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 386.7
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 386.3
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 373.9
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 367.6
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 363.8
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 357.4
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 349.9
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 349.1
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 344.8
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 339.3
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 338.6
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 336.9
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 330.4
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 327.3
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 326.1
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 322.3
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 316.8
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 316.0
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 315.4
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 307.7
GTEX-NL3H-0011-R7a-SM-2I3G5 60-69 years, male 304.3
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 298.1
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 297.4
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 297.2
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 295.3
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 286.5
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 280.4
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 278.5
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 278.1
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 277.9
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 273.6
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 273.0
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 270.5
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 269.4
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 268.3
GTEX-R55E-0011-R7A-SM-2TC5Z 20-29 years, male 267.5
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 267.0
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 266.6
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 263.6
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 262.3
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 259.5
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 256.8
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 256.3
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 255.8
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 255.6
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 254.1
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 253.5
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 250.7
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 250.6
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 250.2
GTEX-N7MS-0011-R7a-SM-2HMKN 60-69 years, male 248.0
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 244.4
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 242.2
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 242.0
GTEX-P44G-0011-R7A-SM-2I3F9 30-39 years, male 239.0
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 237.7
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 237.5
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 236.1
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 231.3
GTEX-NPJ8-0011-R7a-SM-2HMJV 40-49 years, male 229.8
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 228.7
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 226.4
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 225.6
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 225.1
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 225.1
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 224.9
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 222.8
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 222.7
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 222.4
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 221.7
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 220.4
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 216.8
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 216.2
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 215.8
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 211.6
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 211.2
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 210.0
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 208.8
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 205.9
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 203.3
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 200.3
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 198.6
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 198.4
GTEX-18464-0011-R7b-SM-731CM 50-59 years, male 197.6
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 196.3
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 194.8
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 191.3
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 190.7
GTEX-1J1OQ-0011-R7b-SM-ARU87 40-49 years, female 190.4
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 190.1
GTEX-TSE9-0011-R7A-SM-3DB7P 60-69 years, female 188.3
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 187.9
GTEX-1IOXB-0011-R7b-SM-CE6SM 50-59 years, male 187.5
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 186.8
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 186.7
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 185.6
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 185.1
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 185.0
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 184.6
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 182.5
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 182.5
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 180.7
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 179.4
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 178.0
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 177.9
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 177.2
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 176.3
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 176.1
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 175.6
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 174.2
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 173.3
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 172.4
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 171.8
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 171.2
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 170.1
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 170.1
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 170.0
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 169.4
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 168.5
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 166.8
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 166.6
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 164.3
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 164.1
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 162.6
GTEX-RU72-0011-R7A-SM-2TF5U 50-59 years, female 162.3
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 162.2
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 162.2
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 162.2
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 161.3
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 160.3
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 159.4
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 157.4
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 155.2
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 155.0
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 153.2
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 152.2
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 151.4
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 150.1
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 149.1
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 146.6
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 145.6
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 143.7
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 143.6
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 141.8
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 140.9
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 140.3
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 139.0
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 137.8
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 137.5
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 135.7
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 134.5
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 134.0
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 133.5
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 131.6
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 130.9
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 129.3
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 128.9
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 127.6
GTEX-OHPN-0011-R7A-SM-2I5FI 60-69 years, female 126.8
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 125.9
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 123.0
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 122.7
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 122.6
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 122.3
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 119.8
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 116.3
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 113.6
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 112.3
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 109.0
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 107.9
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 107.5
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 105.4
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 96.4
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 87.6
Show allShow less

BASAL GANGLIA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

866.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 594.7
FF:10164-103B2 76 years, female 594.7
Nucleus accumbens
Scaled Tags Per Million: 793.7
FF:10037-101F1 23-56 years, mixed 793.7
Putamen
Scaled Tags Per Million: 866.6
FF:10176-103C5 60 years, female 866.6
Globus pallidus
Scaled Tags Per Million: 471.5
FF:10175-103C4 60 years, female 546.9
FF:10161-103A8 76 years, female 396.0

BASAL GANGLIA - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

664.6
Mouse sample Sample description nTPM
Caudate putamen
nTPM: 564.3
Samples: 4

Max nTPM: 590.9
Min nTPM: 541.5
Sample A Male 572.0
Sample B Male 552.7
Sample C Female 590.9
Sample D Female 541.5
Septum
nTPM: 664.6
Samples: 4

Max nTPM: 695.7
Min nTPM: 616.2
Sample A Male 663.8
Sample B Male 682.6
Sample C Female 695.7
Sample D Female 616.2
Ventral forebrain
nTPM: 631.3
Samples: 4

Max nTPM: 654.9
Min nTPM: 592.1
Sample A Male 639.2
Sample B Male 654.9
Sample C Female 592.1
Sample D Female 638.9

BASAL GANGLIA - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

22.8
Allen experiment id Experiment description Expression energy
Striatum
Expression energy: 22.8
71381013 Antisense, RP_050428_02_F12, Mouse strain C57BL/6J (56 days, male) 22.8
Pallidum
Expression energy: 20.7
71381013 Antisense, RP_050428_02_F12, Mouse strain C57BL/6J (56 days, male) 20.7

Contact

  • NEWS ARTICLES
  • PRESS ROOM

The Project

  • INTRODUCTION
  • ORGANIZATION
  • PUBLICATIONS

The Human Protein Atlas

  • DOWNLOADABLE DATA
  • LICENCE & CITATION
  • HELP & FAQ
The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.


contact@proteinatlas.org