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BRAIN BASAL GANGLIA Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS MEDULLA OBLONGATA
MIDBRAIN OLFACTORY BULB PITUITARY GLAND PONS RETINA SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
AND
VALIDATION
Brain proteome
Basal ganglia
BASAL GANGLIA - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glial cells: Low
Neuronal cells: Low
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:243.7 nTPM
HPA Brain:409.8 nTPM
GTEx:243.7 nTPM
FANTOM5:497.8 Scaled Tags Per Million
Pig:177.0 nTPM
Mouse:193.2 nTPM
Allen mouse:12.4 Expression energy

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA024290Antibody HPA058487
Glial cells LowNot detected
Neuronal cells MediumNot detected





BASAL GANGLIA - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

409.8
Sample id Sample description nTPM
Caudate nucleus
nTPM: 311.9
2290 Female, age 72, unknown 377.2
1781 Male, age 74, unknown 374.6
2846 Female, age 79, unknown 332.3
1857 Female, age 85, left hemisphere 313.3
2289 Male, age 61, right hemisphere 308.1
1854 Male, age 80, left hemisphere 299.4
2288 Male, age 75, left hemisphere 293.1
2481 Female, age 94, left hemisphere 197.2
Globus pallidus, externus
nTPM: 88.5
2646 Male, age 61, right hemisphere 120.9
2772 Female, age 79, unknown 96.9
2567 Female, age 72, unknown 83.2
2395 Male, age 75, both hemispheres 76.3
1996 Male, age 80, right hemisphere 65.2
Globus pallidus, internus
nTPM: 79.6
2483 Female, age 94, right hemisphere 157.9
1818 Male, age 74, unknown 104.0
2566 Female, age 72, unknown 82.0
2287 Male, age 75, right hemisphere 69.7
2037 Male, age 80, right hemisphere 67.5
2778 Female, age 91, both hemispheres 42.8
2111 Female, age 85, right hemisphere 33.0
Nucleus accumbens
nTPM: 299.2
1783 Male, age 74, unknown 428.5
1856 Female, age 91, right hemisphere 406.7
2824 Male, age 61, right hemisphere 371.9
1806 Female, age 85, left hemisphere 330.1
2698 Female, age 72, unknown 298.7
2286 Male, age 75, left hemisphere 245.6
2732 Male, age 80, right hemisphere 180.6
2391 Female, age 94, left hemisphere 131.3
Nucleus basalis of Meynert
nTPM: 217.3
2484 Female, age 94, left hemisphere 257.1
2393 Male, age 80, right hemisphere 239.5
2821 Male, age 75, both hemispheres 211.6
2569 Male, age 61, both hemispheres 160.9
Nucleus of the diagonal band
nTPM: 409.8
2775 Male, age 80, right hemisphere 481.5
1812 Female, age 91, both hemispheres 474.0
2029 Male, age 61, right hemisphere 461.0
2195 Female, age 85, both hemispheres 437.7
1979 Male, age 74, unknown 194.5
Putamen
nTPM: 298.5
1838 Male, age 80, right hemisphere 379.1
1937 Female, age 91, right hemisphere 343.1
1829 Male, age 74, unknown 308.0
2647 Male, age 75, left hemisphere 301.5
2466 Female, age 79, unknown 280.5
2489 Female, age 72, unknown 259.4
2482 Female, age 94, left hemisphere 218.3
Septal nuclei
nTPM: 321.6
1960 Male, age 74, unknown 489.1
2629 Female, age 94, right hemisphere 447.7
2009 Female, age 91, both hemispheres 391.3
2031 Female, age 72, unknown 366.6
2059 Female, age 85, both hemispheres 293.2
2394 Male, age 61, left hemisphere 163.1
2199 Male, age 80, right hemisphere 100.5
Stria terminalis, bed nucleus
nTPM: 366.9
1974 Female, age 91, both hemispheres 477.2
2486 Female, age 94, both hemispheres 410.0
2201 Male, age 74, unknown 213.4

BASAL GANGLIA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

243.7
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 190.3
Samples: 246

Max nTPM: 440.1
Min nTPM: 34.9
Std nTPM: 89.3
Median nTPM: 184.4
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 440.1
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 423.8
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 398.3
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 395.2
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 391.9
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 387.1
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 384.3
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 371.1
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 365.8
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 355.4
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 354.9
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 354.5
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 351.1
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 344.6
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 343.7
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 335.0
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 333.8
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 332.9
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 331.9
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 331.5
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 324.0
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 323.1
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 317.6
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 316.7
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 316.4
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 315.3
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 312.7
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 312.7
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 308.2
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 302.4
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 298.3
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 298.1
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 297.7
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 295.1
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 294.7
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 292.8
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 292.6
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 290.5
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 289.6
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 287.5
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 284.6
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 284.6
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 284.1
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 283.5
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 282.5
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 279.6
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 279.5
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 276.7
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 268.9
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 268.1
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 266.6
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 266.2
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 260.2
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 258.5
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 257.7
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 257.3
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 257.1
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 255.8
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 255.4
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 255.0
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 252.6
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 251.1
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 250.0
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 248.8
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 246.1
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 245.2
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 245.0
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 243.9
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 242.9
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 239.2
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 238.8
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 238.8
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 237.2
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 235.8
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 235.8
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 233.5
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 232.9
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 231.2
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 229.8
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 229.3
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 229.2
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 228.6
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 226.0
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 225.8
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 225.6
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 224.7
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 224.4
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 223.7
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 222.9
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 221.8
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 219.5
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 219.1
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 218.4
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 218.2
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 217.7
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 216.5
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 214.7
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 213.6
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 213.0
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 212.1
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 211.9
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 207.0
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 206.9
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 205.5
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 204.8
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 201.4
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 198.7
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 198.1
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 197.2
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 196.8
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 196.6
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 196.4
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 195.8
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 194.7
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 194.2
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 193.9
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 193.4
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 189.5
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 188.2
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 188.0
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 185.6
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 184.5
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 184.4
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 184.4
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 183.7
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 183.5
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 181.7
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 180.8
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 180.3
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 179.1
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 178.5
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 177.7
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 175.6
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 174.0
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 171.4
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 168.9
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 168.0
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 166.8
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 166.1
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 164.9
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 161.8
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 161.1
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 160.8
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 160.6
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 160.3
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 160.3
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 159.7
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 159.6
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 156.0
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 155.3
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 154.3
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 152.9
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 151.3
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 150.2
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 148.0
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 146.4
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 145.2
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 142.5
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 141.6
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 141.0
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 139.4
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 138.0
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 137.3
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 136.8
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 136.0
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 135.7
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 134.2
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 132.4
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 131.6
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 128.4
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 128.1
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 126.1
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 125.8
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 125.1
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 124.9
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 123.5
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 122.4
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 122.3
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 120.1
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 119.1
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 118.8
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 117.8
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 116.9
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 115.8
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 115.0
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 114.7
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 113.1
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 111.7
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 109.2
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 109.0
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 108.3
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 106.0
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 105.0
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 104.6
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 104.1
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 102.6
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 101.3
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 100.1
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 99.9
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 99.6
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 97.1
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 96.8
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 95.0
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 94.9
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 94.5
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 94.1
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 93.7
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 93.7
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 92.4
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 92.2
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 89.5
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 89.4
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 88.8
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 85.8
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 85.7
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 83.8
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 81.4
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 81.2
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 80.7
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 79.0
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 78.9
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 78.8
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 78.1
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 77.2
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 76.7
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 75.1
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 74.7
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 73.5
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 72.3
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 71.5
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 70.9
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 70.4
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 69.1
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 68.4
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 66.5
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 66.1
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 64.1
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 62.0
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 56.6
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 52.4
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 52.4
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 52.2
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 45.2
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 41.0
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 37.7
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 34.9
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Brain - Nucleus accumbens (basal ganglia)
Average nTPM: 243.7
Samples: 246

Max nTPM: 521.3
Min nTPM: 28.2
Std nTPM: 99.1
Median nTPM: 256.1
GTEX-1F75A-0011-R6b-SM-9QEHD 50-59 years, male 521.3
GTEX-11NV4-0011-R6a-SM-57WD5 60-69 years, male 457.0
GTEX-13FHO-0011-R6b-SM-5LZX1 60-69 years, male 447.0
GTEX-1I1GR-0011-R6a-SM-CMKHI 60-69 years, male 430.3
GTEX-1F7RK-0011-R6b-SM-ARZMG 20-29 years, female 430.0
GTEX-1I1CD-0011-R6b-SM-CJI3Y 60-69 years, female 426.6
GTEX-13X6J-0011-R6a-SM-5PNUB 50-59 years, male 410.6
GTEX-18464-0011-R6a-SM-731CA 50-59 years, male 408.7
GTEX-1313W-0011-R6a-SM-5K7XO 50-59 years, female 405.2
GTEX-1AX9I-0011-R6a-SM-7P8PK 60-69 years, male 401.9
GTEX-N7MS-0011-R6a-SM-2HMJ4 60-69 years, male 398.5
GTEX-11OF3-0011-R6b-SM-57WBG 60-69 years, male 392.9
GTEX-12WSH-0011-R6b-SM-5P9F4 50-59 years, male 374.3
GTEX-NL3H-0011-R6a-SM-2I3G8 60-69 years, male 373.9
GTEX-13OVL-0011-R6a-SM-5L3G4 50-59 years, male 373.5
GTEX-12ZZZ-0011-R6b-SM-5EQ5B 60-69 years, male 371.4
GTEX-1GN73-0011-R6b-SM-CJI2T 60-69 years, male 370.9
GTEX-1F6IF-0011-R6a-SM-9QEIO 60-69 years, male 369.1
GTEX-14BIN-0011-R6a-SM-5S2RH 50-59 years, female 366.4
GTEX-145MH-0011-R6a-SM-5PNZ7 50-59 years, male 364.7
GTEX-1HUB1-0011-R6b-SM-ARU6W 60-69 years, male 362.4
GTEX-12WSC-0011-R6b-SM-5LU99 50-59 years, male 362.1
GTEX-1F75W-0011-R6a-SM-9QEI5 60-69 years, male 357.5
GTEX-1B933-0011-R6b-SM-79OOQ 50-59 years, female 357.4
GTEX-11DXY-0011-R6a-SM-DNZZF 60-69 years, male 356.9
GTEX-1I1GV-0011-R6b-SM-ARU6Q 60-69 years, male 356.9
GTEX-13O3Q-0011-R6a-SM-5KM2V 50-59 years, male 353.8
GTEX-11DZ1-0011-R6b-SM-DNZZG 50-59 years, male 353.0
GTEX-1HR9M-0011-R6a-SM-ARU6Z 60-69 years, male 352.6
GTEX-13VXU-0011-R6a-SM-5SI71 50-59 years, male 352.2
GTEX-1OJC4-0011-R6a-SM-EXOIM 50-59 years, female 350.5
GTEX-16YQH-0011-R6b-SM-7938T 30-39 years, male 349.5
GTEX-1HGF4-0011-R6a-SM-A96S1 60-69 years, male 348.8
GTEX-1B8SF-0011-R6b-SM-7MXUD 60-69 years, male 346.6
GTEX-14JIY-0011-R6b-SM-68714 60-69 years, male 343.8
GTEX-14BMV-0011-R6b-SM-5YY9I 50-59 years, male 343.3
GTEX-12ZZX-0011-R6a-SM-5HL8L 40-49 years, female 342.7
GTEX-14JG1-0011-R6b-SM-5YYAU 40-49 years, male 341.8
GTEX-1HT8W-0011-R6a-SM-CM2SY 30-39 years, male 341.8
GTEX-12ZZY-0011-R6b-SM-5EGLA 60-69 years, male 339.6
GTEX-1EX96-0011-R6a-SM-9OSVV 50-59 years, male 339.1
GTEX-XLM4-0011-R6A-SM-4AT4B 60-69 years, male 338.8
GTEX-14PJM-0011-R6a-SM-6872G 50-59 years, female 338.4
GTEX-1GZ4I-0011-R6b-SM-9WG77 50-59 years, male 338.3
GTEX-NPJ7-0011-R6a-SM-2I3G7 60-69 years, female 337.9
GTEX-145LS-0011-R6b-SM-5PNWL 60-69 years, female 335.2
GTEX-1JMLX-0011-R6b-SM-EXUT9 50-59 years, male 335.1
GTEX-1HB9E-0011-R6b-SM-A9G1P 50-59 years, male 334.7
GTEX-139TT-0011-R6b-SM-5J2ON 60-69 years, male 334.1
GTEX-1LVAO-0011-R6b-SM-EZ6MX 60-69 years, male 332.1
GTEX-1J8Q2-0011-R6a-SM-CKZPG 60-69 years, male 331.6
GTEX-1MJK2-0011-R6a-SM-EXUS3 50-59 years, male 330.7
GTEX-13S7M-0011-R6b-SM-5O9D8 60-69 years, female 329.0
GTEX-ZDXO-0011-R6a-SM-4WWCT 60-69 years, male 328.7
GTEX-13OW6-0011-R6b-SM-5L3GR 50-59 years, male 327.1
GTEX-131XH-0011-R6a-SM-5KM2G 50-59 years, male 326.7
GTEX-1ICLZ-0011-R6b-SM-A9G3A 60-69 years, male 326.6
GTEX-1GTWX-0011-R6a-SM-A96RN 60-69 years, male 326.1
GTEX-1IDJH-0011-R6a-SM-A9SLZ 70-79 years, male 325.6
GTEX-Z93S-0011-R6b-SM-4RGNJ 50-59 years, male 323.5
GTEX-13X6K-0011-R6a-SM-5P9K6 60-69 years, female 321.7
GTEX-15CHQ-0011-R6b-SM-69LOX 60-69 years, male 321.7
GTEX-1GF9W-0011-R6b-SM-9QEIE 60-69 years, male 317.8
GTEX-18A6Q-0011-R6a-SM-7LG6R 60-69 years, male 316.3
GTEX-1E1VI-0011-R6a-SM-9OSVJ 50-59 years, male 315.6
GTEX-1H3NZ-0011-R6b-SM-A9G1N 60-69 years, male 315.3
GTEX-1GF9V-0011-R6b-SM-CJI2Q 60-69 years, male 314.2
GTEX-13FLV-0011-R6a-SM-5KLZ4 50-59 years, male 313.3
GTEX-1B8L1-0011-R6b-SM-7P8SU 60-69 years, male 313.2
GTEX-13O3O-0011-R6b-SM-5P9GY 60-69 years, female 313.0
GTEX-13112-0011-R6b-SM-5DUVK 50-59 years, male 312.9
GTEX-1A3MX-0011-R6a-SM-7P8S9 60-69 years, male 312.7
GTEX-Q2AG-0011-R6A-SM-2HML7 40-49 years, female 311.3
GTEX-17F97-0011-R6a-SM-7EPGS 50-59 years, male 310.9
GTEX-1F6I4-0011-R6a-SM-CE6R4 60-69 years, male 309.1
GTEX-12WSF-0011-R6b-SM-5HL8W 70-79 years, male 308.0
GTEX-17MF6-0011-R6b-SM-7LG6G 40-49 years, male 307.9
GTEX-1EMGI-0011-R6a-SM-9OSVR 60-69 years, male 307.4
GTEX-ZXG5-0011-R6a-SM-57WBZ 60-69 years, male 306.8
GTEX-13NYB-0011-R6b-SM-5MR51 40-49 years, male 305.9
GTEX-WHSE-0011-R6A-SM-3P5ZP 20-29 years, male 304.3
GTEX-14BIM-0011-R6b-SM-5S2VB 60-69 years, female 302.3
GTEX-ZE9C-0011-R6a-SM-4WWCW 60-69 years, male 302.0
GTEX-1C6VR-0011-R6a-SM-7MXU8 60-69 years, male 301.3
GTEX-147GR-0011-R6b-SM-5S2RO 60-69 years, male 300.6
GTEX-13RTJ-0011-R6a-SM-5SI74 60-69 years, male 297.3
GTEX-1J1OQ-0011-R6a-SM-ARU86 40-49 years, female 296.5
GTEX-1F88E-0011-R6a-SM-CKZNW 60-69 years, female 294.1
GTEX-17HG3-0011-R6b-SM-79OK8 30-39 years, female 293.7
GTEX-14ASI-0011-R6a-SM-5S2UZ 60-69 years, male 288.0
GTEX-13NYS-0011-R6b-SM-5MR3R 60-69 years, male 287.1
GTEX-13N2G-0011-R6b-SM-5MR3P 60-69 years, male 286.9
GTEX-WWYW-0011-R6A-SM-3NB3G 50-59 years, female 286.6
GTEX-NL4W-0011-R6a-SM-2I3GA 50-59 years, male 285.3
GTEX-12WSM-0011-R6b-SM-5EQ6N 60-69 years, male 285.2
GTEX-1HBPI-0011-R6b-SM-A9G1T 50-59 years, male 282.2
GTEX-1CB4G-0011-R6b-SM-9QEGO 60-69 years, male 281.7
GTEX-14ABY-0011-R6a-SM-5PNWR 50-59 years, male 280.5
GTEX-14PN4-0011-R6b-SM-69LQU 50-59 years, male 279.0
GTEX-17EVP-0011-R6b-SM-7LT99 40-49 years, male 277.4
GTEX-15ER7-0011-R6a-SM-6M46M 20-29 years, female 276.5
GTEX-T5JC-0011-R6A-SM-D3L87 20-29 years, male 276.5
GTEX-1MA7X-0011-R6a-SM-EYYWR 60-69 years, male 274.8
GTEX-1HBPH-0011-R6a-SM-CKZOV 40-49 years, female 274.7
GTEX-14PQA-0011-R6b-SM-6AJAM 50-59 years, female 274.2
GTEX-12ZZW-0011-R6a-SM-5DUVZ 50-59 years, male 272.2
GTEX-144GL-0011-R6a-SM-5P9HW 50-59 years, male 271.9
GTEX-1IY9M-0011-R6a-SM-D4P28 60-69 years, male 271.6
GTEX-1GN1U-0011-R6a-SM-CKZNO 50-59 years, female 271.5
GTEX-1LVA9-0011-R6a-SM-EYYWH 50-59 years, male 271.0
GTEX-QVJO-0011-R6A-SM-2S1QN 60-69 years, female 270.6
GTEX-1H1CY-0011-R6b-SM-CE6RP 60-69 years, female 269.5
GTEX-144GO-0011-R6b-SM-5S2V7 60-69 years, male 266.3
GTEX-X585-0011-R6A-SM-46MVJ 50-59 years, male 266.2
GTEX-R55E-0011-R6A-SM-2TC5T 20-29 years, male 265.5
GTEX-X4XX-0011-R6B-SM-46MWP 60-69 years, male 262.7
GTEX-1GZ2Q-0011-R6a-SM-9OSWM 40-49 years, male 261.3
GTEX-15RJE-0011-R6a-SM-7DHL8 40-49 years, male 261.2
GTEX-1B996-0011-R6b-SM-793AQ 60-69 years, male 260.6
GTEX-13IVO-0011-R6b-SM-5K7X9 70-79 years, male 260.1
GTEX-11PRG-0011-R6b-SM-DO923 50-59 years, male 257.5
GTEX-14E7W-0011-R6b-SM-5ZZV3 70-79 years, male 256.6
GTEX-1BAJH-0011-R6b-SM-7MXT2 70-79 years, male 256.2
GTEX-132Q8-0011-R6a-SM-5K7YN 60-69 years, male 255.9
GTEX-1H1ZS-0011-R6b-SM-A9G1F 70-79 years, male 255.7
GTEX-1H1DG-0011-R6a-SM-A9SK8 70-79 years, male 255.3
GTEX-13FLW-0011-R6b-SM-5L3EN 50-59 years, male 254.8
GTEX-1GMRU-0011-R6b-SM-A9G3B 50-59 years, male 254.7
GTEX-13JUV-0011-R6b-SM-5LZYG 40-49 years, female 252.8
GTEX-13FHP-0011-R6b-SM-5LZY6 50-59 years, male 252.7
GTEX-13SLX-0011-R6a-SM-5PNX4 50-59 years, female 251.8
GTEX-13G51-0011-R6b-SM-5LZX4 60-69 years, male 249.3
GTEX-TSE9-0011-R6A-SM-3DB7L 60-69 years, female 246.7
GTEX-1GMR8-0011-R6b-SM-CE6RC 50-59 years, female 246.5
GTEX-1JJEA-0011-R6a-SM-EXUS1 60-69 years, male 245.7
GTEX-S7SE-0011-R6A-SM-2XCD9 50-59 years, male 245.6
GTEX-N7MT-0011-R6a-SM-2I3G3 60-69 years, female 243.7
GTEX-T6MN-0011-R6A-SM-32QP8 50-59 years, male 243.1
GTEX-14C5O-0011-R6a-SM-5YYB6 60-69 years, male 241.6
GTEX-17EVQ-0011-R6a-SM-7189U 70-79 years, male 240.6
GTEX-WZTO-0011-R6B-SM-4E3J6 40-49 years, male 239.5
GTEX-QMR6-0011-R6A-SM-32PKP 50-59 years, male 239.1
GTEX-13QJC-0011-R6a-SM-5S2VI 60-69 years, female 237.5
GTEX-ZVZQ-0011-R6b-SM-57WAY 60-69 years, female 237.3
GTEX-17HHY-0011-R6b-SM-7189Z 50-59 years, male 235.9
GTEX-1I1GQ-0011-R6b-SM-CE6SE 50-59 years, male 235.1
GTEX-NPJ8-0011-R6a-SM-2HMKB 40-49 years, male 233.1
GTEX-1H4P4-0011-R6a-SM-ARZLR 50-59 years, male 230.7
GTEX-1LH75-0011-R6a-SM-EXURS 50-59 years, female 230.0
GTEX-12WSE-0011-R6b-SM-5LZV5 20-29 years, male 229.9
GTEX-145LU-0011-R6a-SM-5S2V6 50-59 years, male 228.1
GTEX-T2IS-0011-R6A-SM-32QP2 20-29 years, female 226.0
GTEX-1EKGG-0011-R6a-SM-CL538 60-69 years, male 225.0
GTEX-Y8DK-0011-R6A-SM-4V6EG 60-69 years, male 223.0
GTEX-1IKK5-0011-R6b-SM-A9SLY 60-69 years, male 222.5
GTEX-XMD1-0011-R6A-SM-4AT5K 60-69 years, male 222.4
GTEX-1192X-0011-R6a-SM-DNZZB 50-59 years, male 219.6
GTEX-14LZ3-0011-R6a-SM-D3L8C 60-69 years, female 218.1
GTEX-147F4-0011-R6b-SM-5S2UP 50-59 years, male 217.5
GTEX-13SLW-0011-R6a-SM-5O9BH 70-79 years, male 217.2
GTEX-11O72-0011-R6a-SM-DNZZQ 40-49 years, male 215.0
GTEX-UTHO-0011-R6A-SM-3GIJW 60-69 years, male 214.6
GTEX-11NUK-0011-R6a-SM-DO93O 50-59 years, male 212.5
GTEX-11WQC-0011-R6a-SM-5BC77 60-69 years, male 210.8
GTEX-13JVG-0011-R6a-SM-5MR3E 60-69 years, male 210.7
GTEX-11ONC-0011-R6a-SM-DO12A 60-69 years, male 209.2
GTEX-18465-0011-R6a-SM-7LG6M 50-59 years, male 208.0
GTEX-RU72-0011-R6A-SM-2TF71 50-59 years, female 203.6
GTEX-WL46-0011-R6A-SM-3LK6X 50-59 years, male 196.7
GTEX-1N2DW-0011-R6a-SM-EZ6MW 50-59 years, male 191.8
GTEX-P44G-0011-R6A-SM-2XCD3 30-39 years, male 190.1
GTEX-1GN2E-0011-R6b-SM-9QEII 60-69 years, male 189.5
GTEX-1I1GS-0011-R6b-SM-CMKHE 60-69 years, male 189.5
GTEX-1GZHY-0011-R6a-SM-9OSWL 50-59 years, female 184.5
GTEX-15DCD-0011-R6b-SM-6M46L 70-79 years, female 184.1
GTEX-183WM-0011-R6b-SM-72D66 70-79 years, female 183.9
GTEX-1399T-0011-R6b-SM-5K7YL 60-69 years, male 183.1
GTEX-17JCI-0011-R6a-SM-72D6D 60-69 years, female 182.8
GTEX-1IGQW-0011-R6a-SM-CM2TC 60-69 years, male 182.6
GTEX-1A8G6-0011-R6b-SM-7P8PE 60-69 years, male 171.1
GTEX-WVLH-0011-R6A-SM-3MJFZ 50-59 years, male 170.3
GTEX-12WSD-0011-R6b-SM-5P9JU 60-69 years, female 169.2
GTEX-11TTK-0011-R6b-SM-DNZZW 60-69 years, female 168.6
GTEX-1R46S-0011-R6a-SM-EZ6N6 60-69 years, female 164.2
GTEX-13FXS-0011-R6b-SM-5L3F7 50-59 years, male 163.9
GTEX-1HBPM-0011-R6b-SM-ARU73 60-69 years, female 162.3
GTEX-15DYW-0011-R6b-SM-6PALA 60-69 years, female 160.5
GTEX-YJ89-0011-R6a-SM-4V6GN 60-69 years, male 159.4
GTEX-1F48J-0011-R6a-SM-CJI2F 50-59 years, female 158.2
GTEX-1I19N-0011-R6b-SM-CY8GC 70-79 years, male 157.6
GTEX-1445S-0011-R6b-SM-5PNUF 60-69 years, male 156.5
GTEX-13OW8-0011-R6b-SM-5L3I3 60-69 years, male 149.2
GTEX-X4XY-0011-R6B-SM-46MVB 60-69 years, male 148.7
GTEX-ZE7O-0011-R6a-SM-57WCI 50-59 years, female 144.8
GTEX-1C64N-0011-R6a-SM-7IGO9 50-59 years, male 144.7
GTEX-ZVT3-0011-R6a-SM-51MSU 60-69 years, female 141.6
GTEX-15G19-0011-R6b-SM-7KUM3 60-69 years, male 135.8
GTEX-13OVJ-0011-R6b-SM-5L3GH 50-59 years, female 135.1
GTEX-1LB8K-0011-R6a-SM-EXURT 50-59 years, male 134.6
GTEX-1I1HK-0011-R6b-SM-CM2T9 60-69 years, male 134.0
GTEX-13OVH-0011-R6b-SM-5LUAX 70-79 years, male 133.7
GTEX-1EWIQ-0011-R6a-SM-ARU8G 70-79 years, female 129.7
GTEX-13PDP-0011-R6b-SM-5O9D5 60-69 years, male 128.1
GTEX-11DXW-0011-R6a-SM-DO11N 40-49 years, male 127.7
GTEX-1IKOH-0011-R6b-SM-A9G1W 60-69 years, female 127.1
GTEX-QVUS-0011-R6A-SM-3GACX 60-69 years, female 126.8
GTEX-1C6WA-0011-R6a-SM-7PBYP 60-69 years, male 124.8
GTEX-11GSP-0011-R6b-SM-57WBQ 60-69 years, female 123.4
GTEX-11DYG-0011-R6a-SM-DO936 60-69 years, male 121.3
GTEX-OHPN-0011-R6A-SM-2I5FH 60-69 years, female 120.7
GTEX-12584-0011-R6a-SM-5NQ7C 40-49 years, male 120.1
GTEX-13N1W-0011-R6a-SM-5MR43 70-79 years, male 120.1
GTEX-1IL2U-0011-R6a-SM-ARZLG 60-69 years, male 117.7
GTEX-13PL6-0011-R6a-SM-5O9C5 40-49 years, female 117.2
GTEX-ZV68-0011-R6a-SM-51MSR 50-59 years, female 116.0
GTEX-13OW5-0011-R6b-SM-5O9BW 60-69 years, male 111.1
GTEX-1EH9U-0011-R6a-SM-CJI2C 60-69 years, male 108.1
GTEX-14753-0011-R6b-SM-5S2UD 60-69 years, male 107.6
GTEX-1LC47-0011-R6b-SM-EZ6MI 60-69 years, male 97.5
GTEX-S7PM-0011-R6A-SM-3NM8F 60-69 years, male 94.7
GTEX-14PHW-0011-R6b-SM-5YYAR 60-69 years, female 92.0
GTEX-X261-0011-R6B-SM-4E3J8 50-59 years, male 91.5
GTEX-1H23P-0011-R6b-SM-A9G1H 60-69 years, male 89.8
GTEX-16XZZ-0011-R6a-SM-7IGNE 60-69 years, male 88.3
GTEX-1E2YA-0011-R6b-SM-CE6R2 50-59 years, male 87.3
GTEX-ZAB4-0011-R6a-SM-4SOKD 40-49 years, male 87.2
GTEX-139TS-0011-R6a-SM-5J2OB 60-69 years, male 86.7
GTEX-1H3VE-0011-R6b-SM-A9G1M 40-49 years, male 85.8
GTEX-1EN7A-0011-R6b-SM-9QEHW 40-49 years, male 85.3
GTEX-131XW-0011-R6b-SM-5K7XY 50-59 years, female 85.2
GTEX-1H3O1-0011-R6b-SM-CL54U 60-69 years, male 85.0
GTEX-1F75B-0011-R6a-SM-ARZMI 50-59 years, male 84.3
GTEX-PWO3-0011-R6A-SM-2I5F3 60-69 years, female 82.6
GTEX-1CB4H-0011-R6b-SM-CKZNK 60-69 years, female 79.9
GTEX-15EO6-0011-R6a-SM-7KULK 50-59 years, male 74.0
GTEX-16Z82-0011-R6a-SM-7IGLV 60-69 years, male 68.5
GTEX-ZUA1-0011-R6b-SM-4YCDD 40-49 years, male 64.4
GTEX-YFC4-0011-R6b-SM-4V6E1 40-49 years, female 60.9
GTEX-QDT8-0011-R6A-SM-32PKI 30-39 years, female 57.6
GTEX-145MI-0011-R6a-SM-5PNZA 60-69 years, female 54.7
GTEX-X4EP-0011-R6A-SM-3P629 60-69 years, female 52.9
GTEX-ZF28-0011-R6a-SM-4WKHI 60-69 years, male 52.2
GTEX-P44H-0011-R6A-SM-2XCF3 40-49 years, male 39.8
GTEX-1CB4J-0011-R6b-SM-9WG7B 60-69 years, male 35.9
GTEX-1RLM8-0011-R6a-SM-EYYXS 50-59 years, male 34.2
GTEX-1HFI6-0011-R6b-SM-CM2SR 40-49 years, male 28.2
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Brain - Putamen (basal ganglia)
Average nTPM: 172.2
Samples: 205

Max nTPM: 394.9
Min nTPM: 32.2
Std nTPM: 83.0
Median nTPM: 165.7
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 394.9
GTEX-S7SE-0011-R7A-SM-2XCDI 50-59 years, male 348.0
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 339.2
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 337.4
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 337.2
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 315.6
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 315.3
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 312.7
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 311.9
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 311.2
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 309.7
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 306.2
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 306.2
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 306.1
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 302.8
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 298.6
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 297.4
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 295.3
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 295.0
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 289.3
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 285.5
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 285.1
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 281.6
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 280.8
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 280.1
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 279.6
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 277.6
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 273.1
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 267.4
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 267.3
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 266.8
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 266.4
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 262.5
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 260.1
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 259.0
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 257.1
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 256.3
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 256.0
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 255.6
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 255.5
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 254.9
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 254.7
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 253.7
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 253.4
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 251.6
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 250.0
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 248.6
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 248.5
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 248.1
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 247.4
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 245.9
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 245.7
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 243.0
GTEX-QVJO-0011-R7A-SM-2S1QO 60-69 years, female 241.4
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 241.0
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 241.0
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 239.8
GTEX-P44G-0011-R7A-SM-2I3F9 30-39 years, male 236.0
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 235.1
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 231.0
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 230.9
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 227.8
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 225.6
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 225.3
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 224.7
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 223.1
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 221.9
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 219.0
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 213.9
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 211.4
GTEX-R55E-0011-R7A-SM-2TC5Z 20-29 years, male 210.6
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 205.4
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 201.4
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 200.5
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 200.4
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 200.0
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 198.5
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 195.3
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 195.1
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 194.6
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 194.4
GTEX-1IOXB-0011-R7b-SM-CE6SM 50-59 years, male 193.4
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 193.3
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 190.8
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 188.9
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 187.5
GTEX-OHPN-0011-R7A-SM-2I5FI 60-69 years, female 186.7
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 186.6
GTEX-N7MS-0011-R7a-SM-2HMKN 60-69 years, male 184.9
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 184.5
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 182.3
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 180.9
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 179.9
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 179.9
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 175.6
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 174.7
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 174.7
GTEX-1J1OQ-0011-R7b-SM-ARU87 40-49 years, female 172.5
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 170.0
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 168.2
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 167.1
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 166.1
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 165.7
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 165.2
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 165.2
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 163.7
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 161.0
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 159.9
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 159.7
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 157.9
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 157.0
GTEX-TSE9-0011-R7A-SM-3DB7P 60-69 years, female 155.6
GTEX-RU72-0011-R7A-SM-2TF5U 50-59 years, female 154.7
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 154.4
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 153.9
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 149.8
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 147.1
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 146.1
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 145.5
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 143.3
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 142.8
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 140.8
GTEX-18464-0011-R7b-SM-731CM 50-59 years, male 139.3
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 139.0
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 137.4
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 137.0
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 136.6
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 133.7
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 132.7
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 130.8
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 130.6
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 128.9
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 128.8
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 124.7
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 122.9
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 122.8
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 121.2
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 120.8
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 120.1
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 119.2
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 115.3
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 114.5
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 114.2
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 113.9
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 112.8
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 111.3
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 109.3
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 107.6
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 107.5
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 106.3
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 104.4
GTEX-NPJ8-0011-R7a-SM-2HMJV 40-49 years, male 104.0
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 102.7
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 100.6
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 98.7
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 96.5
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 94.8
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 92.6
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 92.5
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 92.3
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 90.6
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 89.4
GTEX-NL3H-0011-R7a-SM-2I3G5 60-69 years, male 89.2
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 88.6
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 87.0
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 86.7
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 85.6
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 85.1
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 81.8
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 81.1
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 78.8
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 77.4
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 77.0
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 76.6
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 76.2
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 75.4
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 75.1
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 71.3
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 69.1
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 67.3
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 65.1
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 64.7
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 64.3
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 63.3
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 63.2
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 61.8
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 61.1
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 60.7
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 60.3
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 60.3
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 60.3
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 58.9
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 58.9
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 57.6
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 53.8
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 53.8
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 50.5
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 48.1
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 46.5
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 46.3
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 44.7
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 44.0
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 40.9
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 40.6
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 32.2
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BASAL GANGLIA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

497.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 334.8
FF:10164-103B2 76 years, female 334.8
Nucleus accumbens
Scaled Tags Per Million: 497.8
FF:10037-101F1 23-56 years, mixed 497.8
Putamen
Scaled Tags Per Million: 442.1
FF:10176-103C5 60 years, female 442.1
Globus pallidus
Scaled Tags Per Million: 77.5
FF:10175-103C4 60 years, female 105.1
FF:10161-103A8 76 years, female 49.8

BASAL GANGLIA - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

177.0
Pig sample Sample description nTPM
Caudate
nTPM: 177.0
Samples: 4

Max nTPM: 218.9
Min nTPM: 148.4
Sample A Female 148.4
Sample B Female 179.3
Sample C Male 218.9
Sample D Male 161.2
Putamen
nTPM: 143.1
Samples: 4

Max nTPM: 187.4
Min nTPM: 63.6
Sample A Female 63.6
Sample B Female 141.4
Sample C Male 180.1
Sample D Male 187.4
Septum
nTPM: 87.8
Samples: 4

Max nTPM: 113.2
Min nTPM: 62.2
Sample A Female 113.2
Sample B Female 102.8
Sample C Male 62.2
Sample D Male 72.8
Ventral pallidum
nTPM: 115.0
Samples: 4

Max nTPM: 151.2
Min nTPM: 77.6
Sample A Female 151.2
Sample B Female 117.6
Sample C Male 77.6
Sample D Male 113.4

BASAL GANGLIA - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

193.2
Mouse sample Sample description nTPM
Caudate putamen
nTPM: 193.2
Samples: 4

Max nTPM: 205.1
Min nTPM: 184.5
Sample A Male 193.7
Sample B Male 205.1
Sample C Female 184.5
Sample D Female 189.6
Septum
nTPM: 98.6
Samples: 4

Max nTPM: 119.9
Min nTPM: 88.4
Sample A Male 119.9
Sample B Male 89.5
Sample C Female 88.4
Sample D Female 96.4
Ventral forebrain
nTPM: 163.5
Samples: 4

Max nTPM: 169.0
Min nTPM: 156.9
Sample A Male 169.0
Sample B Male 156.9
Sample C Female 159.4
Sample D Female 168.7

BASAL GANGLIA - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

12.4
Allen experiment id Experiment description Expression energy
Striatum
Expression energy: 12.4
79544804 Antisense, RP_071018_01_E09, Mouse strain C57BL/6J (56 days, male) 12.4
Pallidum
Expression energy: 9.3
79544804 Antisense, RP_071018_01_E09, Mouse strain C57BL/6J (56 days, male) 9.3

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