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BRAIN BASAL GANGLIA Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS MEDULLA OBLONGATA
MIDBRAIN OLFACTORY BULB PITUITARY GLAND PONS RETINA SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
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VALIDATION
Brain proteome
Basal ganglia
BASAL GANGLIA - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glial cells: Low
Neuronal cells: Not detected
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:668.9 nTPM
HPA Brain:938.7 nTPM
GTEx:668.9 nTPM
FANTOM5:901.5 Scaled Tags Per Million
Pig:332.9 nTPM
Mouse:395.4 nTPM
Allen mouse:6.7 Expression energy

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA045617
Glial cells Low
Neuronal cells Not detected



BASAL GANGLIA - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

938.7
Sample id Sample description nTPM
Caudate nucleus
nTPM: 450.1
2481 Female, age 94, left hemisphere 543.0
2288 Male, age 75, left hemisphere 529.0
1854 Male, age 80, left hemisphere 461.0
2290 Female, age 72, unknown 438.3
2846 Female, age 79, unknown 428.9
1857 Female, age 85, left hemisphere 426.6
1781 Male, age 74, unknown 393.3
2289 Male, age 61, right hemisphere 380.9
Globus pallidus, externus
nTPM: 938.7
1996 Male, age 80, right hemisphere 1258.2
2646 Male, age 61, right hemisphere 1103.4
2567 Female, age 72, unknown 960.0
2772 Female, age 79, unknown 856.1
2395 Male, age 75, both hemispheres 515.6
Globus pallidus, internus
nTPM: 829.1
2037 Male, age 80, right hemisphere 951.6
1818 Male, age 74, unknown 908.6
2111 Female, age 85, right hemisphere 858.9
2566 Female, age 72, unknown 835.5
2778 Female, age 91, both hemispheres 764.2
2483 Female, age 94, right hemisphere 755.4
2287 Male, age 75, right hemisphere 729.3
Nucleus accumbens
nTPM: 455.0
2286 Male, age 75, left hemisphere 547.0
2698 Female, age 72, unknown 544.1
2391 Female, age 94, left hemisphere 541.7
2824 Male, age 61, right hemisphere 452.3
1806 Female, age 85, left hemisphere 447.1
2732 Male, age 80, right hemisphere 413.8
1783 Male, age 74, unknown 383.8
1856 Female, age 91, right hemisphere 310.0
Nucleus basalis of Meynert
nTPM: 614.4
2569 Male, age 61, both hemispheres 1266.5
2393 Male, age 80, right hemisphere 446.2
2821 Male, age 75, both hemispheres 387.1
2484 Female, age 94, left hemisphere 357.6
Nucleus of the diagonal band
nTPM: 281.9
2029 Male, age 61, right hemisphere 335.2
1812 Female, age 91, both hemispheres 313.9
1979 Male, age 74, unknown 291.8
2775 Male, age 80, right hemisphere 248.6
2195 Female, age 85, both hemispheres 220.1
Putamen
nTPM: 478.4
2647 Male, age 75, left hemisphere 617.1
2482 Female, age 94, left hemisphere 537.2
2489 Female, age 72, unknown 534.9
1829 Male, age 74, unknown 527.7
1937 Female, age 91, right hemisphere 409.0
2466 Female, age 79, unknown 377.4
1838 Male, age 80, right hemisphere 345.7
Septal nuclei
nTPM: 349.5
2394 Male, age 61, left hemisphere 488.7
2199 Male, age 80, right hemisphere 462.5
2059 Female, age 85, both hemispheres 391.6
2629 Female, age 94, right hemisphere 331.6
2009 Female, age 91, both hemispheres 293.1
2031 Female, age 72, unknown 260.1
1960 Male, age 74, unknown 219.2
Stria terminalis, bed nucleus
nTPM: 276.1
2201 Male, age 74, unknown 308.2
1974 Female, age 91, both hemispheres 276.0
2486 Female, age 94, both hemispheres 244.1

BASAL GANGLIA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

668.9
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 537.1
Samples: 246

Max nTPM: 1242.5
Min nTPM: 118.6
Std nTPM: 196.5
Median nTPM: 511.7
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 1242.5
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 1198.6
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 1183.7
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 1101.1
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 1093.0
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 1030.9
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 1028.2
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 1006.0
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 954.3
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 949.5
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 937.0
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 935.5
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 925.7
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 915.2
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 911.6
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 855.8
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 854.3
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 854.3
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 841.7
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 828.0
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 822.8
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 799.6
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 798.2
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 791.6
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 789.7
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 788.8
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 782.1
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 779.0
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 763.1
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 762.3
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 748.2
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 745.5
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 742.7
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 741.5
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 740.4
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 740.2
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 732.3
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 725.1
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 724.3
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 713.8
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 712.4
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 708.1
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 703.5
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 693.8
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 692.0
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 680.6
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 674.0
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 672.4
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 670.5
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 664.8
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 663.8
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 660.7
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 657.4
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 655.5
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 653.8
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 652.5
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 648.1
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 647.3
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 646.5
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 645.3
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 641.5
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 638.7
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 638.6
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 638.1
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 634.8
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 634.8
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 631.5
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 631.1
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 624.7
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 624.5
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 623.9
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 622.8
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 620.3
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 619.9
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 619.2
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 616.7
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 612.2
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 612.1
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 611.0
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 606.1
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 605.8
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 604.1
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 604.1
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 597.3
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 594.3
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 591.2
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 589.5
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 588.9
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 580.7
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 577.5
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 575.9
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 573.7
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 572.9
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 571.4
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 565.7
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 561.5
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 561.0
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 560.4
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 556.0
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 554.4
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 553.1
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 552.9
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 551.4
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 550.4
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 548.3
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 545.2
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 538.3
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 532.8
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 527.4
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 523.7
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 523.7
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 520.2
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 518.0
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 516.8
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 516.3
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 514.2
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 513.7
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 513.4
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 513.2
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 512.9
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 512.7
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 512.2
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 511.8
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 511.6
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 507.8
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 507.7
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 507.7
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 502.2
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 502.1
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 501.7
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 501.1
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 498.8
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 493.3
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 491.9
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 489.6
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 487.9
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 487.0
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 485.2
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 484.5
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 484.4
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 482.5
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 481.9
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 480.5
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 478.5
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 476.5
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 476.3
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 474.3
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 473.7
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 473.1
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 471.5
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 467.9
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 463.6
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 463.1
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 461.6
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 456.7
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 455.7
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 454.6
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 448.1
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 446.7
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 442.9
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 440.4
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 439.2
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 438.9
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 436.5
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 435.4
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 434.3
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 433.1
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 432.6
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 430.4
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 429.5
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 428.9
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 427.6
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 426.9
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 425.8
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 425.5
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 422.1
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 421.5
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 416.4
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 415.1
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 404.7
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 403.2
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 402.8
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 401.3
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 399.1
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 395.4
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 392.3
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 392.2
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 391.3
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 391.3
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 388.6
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 386.9
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 386.4
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 382.4
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 382.4
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 380.1
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 377.9
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 375.6
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 369.2
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 368.3
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 358.5
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 356.2
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 350.7
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 347.6
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 347.6
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 346.2
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 343.9
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 343.6
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 341.0
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 339.5
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 337.8
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 337.1
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 336.4
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 335.6
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 333.3
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 327.9
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 323.7
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 321.4
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 318.0
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 308.7
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 303.3
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 300.9
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 299.8
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 299.4
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 299.2
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 297.9
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 297.7
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 293.4
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 292.9
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 291.7
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 291.3
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 285.8
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 285.4
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 282.5
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 280.1
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 277.3
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 274.9
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 270.3
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 268.4
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 267.5
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 251.7
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 245.2
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 238.2
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 231.5
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 181.2
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 137.2
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 118.6
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Brain - Nucleus accumbens (basal ganglia)
Average nTPM: 430.5
Samples: 246

Max nTPM: 1222.3
Min nTPM: 124.3
Std nTPM: 186.8
Median nTPM: 378.8
GTEX-14753-0011-R6b-SM-5S2UD 60-69 years, male 1222.3
GTEX-1IGQW-0011-R6a-SM-CM2TC 60-69 years, male 1114.8
GTEX-1RLM8-0011-R6a-SM-EYYXS 50-59 years, male 1031.4
GTEX-16Z82-0011-R6a-SM-7IGLV 60-69 years, male 973.6
GTEX-13JVG-0011-R6a-SM-5MR3E 60-69 years, male 955.2
GTEX-1LB8K-0011-R6a-SM-EXURT 50-59 years, male 945.1
GTEX-ZVT3-0011-R6a-SM-51MSU 60-69 years, female 867.2
GTEX-1HFI6-0011-R6b-SM-CM2SR 40-49 years, male 854.0
GTEX-1A8G6-0011-R6b-SM-7P8PE 60-69 years, male 853.0
GTEX-1CB4H-0011-R6b-SM-CKZNK 60-69 years, female 852.1
GTEX-131XW-0011-R6b-SM-5K7XY 50-59 years, female 840.9
GTEX-1H23P-0011-R6b-SM-A9G1H 60-69 years, male 836.8
GTEX-ZV68-0011-R6a-SM-51MSR 50-59 years, female 816.3
GTEX-1R46S-0011-R6a-SM-EZ6N6 60-69 years, female 809.0
GTEX-1EN7A-0011-R6b-SM-9QEHW 40-49 years, male 805.7
GTEX-12584-0011-R6a-SM-5NQ7C 40-49 years, male 754.9
GTEX-14PHW-0011-R6b-SM-5YYAR 60-69 years, female 741.5
GTEX-11DYG-0011-R6a-SM-DO936 60-69 years, male 740.4
GTEX-13PL6-0011-R6a-SM-5O9C5 40-49 years, female 734.3
GTEX-139TS-0011-R6a-SM-5J2OB 60-69 years, male 733.4
GTEX-1C64N-0011-R6a-SM-7IGO9 50-59 years, male 729.1
GTEX-1I1HK-0011-R6b-SM-CM2T9 60-69 years, male 725.9
GTEX-1E2YA-0011-R6b-SM-CE6R2 50-59 years, male 723.7
GTEX-1H3O1-0011-R6b-SM-CL54U 60-69 years, male 711.3
GTEX-11TTK-0011-R6b-SM-DNZZW 60-69 years, female 709.0
GTEX-1GN2E-0011-R6b-SM-9QEII 60-69 years, male 707.8
GTEX-1IKOH-0011-R6b-SM-A9G1W 60-69 years, female 703.1
GTEX-145MI-0011-R6a-SM-5PNZA 60-69 years, female 697.3
GTEX-144GO-0011-R6b-SM-5S2V7 60-69 years, male 689.4
GTEX-11GSP-0011-R6b-SM-57WBQ 60-69 years, female 689.0
GTEX-1JJEA-0011-R6a-SM-EXUS1 60-69 years, male 678.3
GTEX-ZUA1-0011-R6b-SM-4YCDD 40-49 years, male 649.1
GTEX-QVUS-0011-R6A-SM-3GACX 60-69 years, female 641.5
GTEX-147F4-0011-R6b-SM-5S2UP 50-59 years, male 640.6
GTEX-X261-0011-R6B-SM-4E3J8 50-59 years, male 631.5
GTEX-RU72-0011-R6A-SM-2TF71 50-59 years, female 631.1
GTEX-15EO6-0011-R6a-SM-7KULK 50-59 years, male 629.4
GTEX-1H4P4-0011-R6a-SM-ARZLR 50-59 years, male 626.4
GTEX-1H3VE-0011-R6b-SM-A9G1M 40-49 years, male 622.2
GTEX-13N1W-0011-R6a-SM-5MR43 70-79 years, male 615.5
GTEX-1LVA9-0011-R6a-SM-EYYWH 50-59 years, male 609.0
GTEX-S7PM-0011-R6A-SM-3NM8F 60-69 years, male 600.7
GTEX-X4XX-0011-R6B-SM-46MWP 60-69 years, male 598.9
GTEX-ZAB4-0011-R6a-SM-4SOKD 40-49 years, male 597.9
GTEX-1F75B-0011-R6a-SM-ARZMI 50-59 years, male 594.9
GTEX-1EH9U-0011-R6a-SM-CJI2C 60-69 years, male 590.9
GTEX-1445S-0011-R6b-SM-5PNUF 60-69 years, male 589.1
GTEX-12ZZW-0011-R6a-SM-5DUVZ 50-59 years, male 587.3
GTEX-1EWIQ-0011-R6a-SM-ARU8G 70-79 years, female 570.4
GTEX-1C6WA-0011-R6a-SM-7PBYP 60-69 years, male 570.0
GTEX-1IL2U-0011-R6a-SM-ARZLG 60-69 years, male 567.9
GTEX-1J8Q2-0011-R6a-SM-CKZPG 60-69 years, male 565.3
GTEX-1I1GQ-0011-R6b-SM-CE6SE 50-59 years, male 553.9
GTEX-13IVO-0011-R6b-SM-5K7X9 70-79 years, male 550.6
GTEX-1N2DW-0011-R6a-SM-EZ6MW 50-59 years, male 534.0
GTEX-17JCI-0011-R6a-SM-72D6D 60-69 years, female 528.8
GTEX-13OW5-0011-R6b-SM-5O9BW 60-69 years, male 522.3
GTEX-1IY9M-0011-R6a-SM-D4P28 60-69 years, male 520.0
GTEX-13OVJ-0011-R6b-SM-5L3GH 50-59 years, female 518.9
GTEX-11DZ1-0011-R6b-SM-DNZZG 50-59 years, male 510.1
GTEX-1CB4J-0011-R6b-SM-9WG7B 60-69 years, male 500.4
GTEX-N7MT-0011-R6a-SM-2I3G3 60-69 years, female 499.4
GTEX-YFC4-0011-R6b-SM-4V6E1 40-49 years, female 497.6
GTEX-1EKGG-0011-R6a-SM-CL538 60-69 years, male 497.5
GTEX-1F48J-0011-R6a-SM-CJI2F 50-59 years, female 493.3
GTEX-13FHP-0011-R6b-SM-5LZY6 50-59 years, male 492.3
GTEX-145LU-0011-R6a-SM-5S2V6 50-59 years, male 488.4
GTEX-13NYB-0011-R6b-SM-5MR51 40-49 years, male 487.0
GTEX-1I19N-0011-R6b-SM-CY8GC 70-79 years, male 485.8
GTEX-1IKK5-0011-R6b-SM-A9SLY 60-69 years, male 483.7
GTEX-13OW8-0011-R6b-SM-5L3I3 60-69 years, male 482.4
GTEX-1GTWX-0011-R6a-SM-A96RN 60-69 years, male 476.8
GTEX-11NV4-0011-R6a-SM-57WD5 60-69 years, male 475.0
GTEX-1F88E-0011-R6a-SM-CKZNW 60-69 years, female 474.3
GTEX-15DYW-0011-R6b-SM-6PALA 60-69 years, female 473.8
GTEX-1MJK2-0011-R6a-SM-EXUS3 50-59 years, male 469.6
GTEX-13G51-0011-R6b-SM-5LZX4 60-69 years, male 466.6
GTEX-1HUB1-0011-R6b-SM-ARU6W 60-69 years, male 465.8
GTEX-X4XY-0011-R6B-SM-46MVB 60-69 years, male 463.1
GTEX-13PDP-0011-R6b-SM-5O9D5 60-69 years, male 459.4
GTEX-11NUK-0011-R6a-SM-DO93O 50-59 years, male 459.4
GTEX-139TT-0011-R6b-SM-5J2ON 60-69 years, male 458.1
GTEX-P44H-0011-R6A-SM-2XCF3 40-49 years, male 457.6
GTEX-1GZ2Q-0011-R6a-SM-9OSWM 40-49 years, male 456.6
GTEX-1BAJH-0011-R6b-SM-7MXT2 70-79 years, male 455.1
GTEX-11ONC-0011-R6a-SM-DO12A 60-69 years, male 454.0
GTEX-Y8DK-0011-R6A-SM-4V6EG 60-69 years, male 452.9
GTEX-1I1GR-0011-R6a-SM-CMKHI 60-69 years, male 447.4
GTEX-1E1VI-0011-R6a-SM-9OSVJ 50-59 years, male 447.1
GTEX-QDT8-0011-R6A-SM-32PKI 30-39 years, female 443.8
GTEX-YJ89-0011-R6a-SM-4V6GN 60-69 years, male 441.1
GTEX-WL46-0011-R6A-SM-3LK6X 50-59 years, male 437.4
GTEX-ZDXO-0011-R6a-SM-4WWCT 60-69 years, male 434.7
GTEX-13QJC-0011-R6a-SM-5S2VI 60-69 years, female 433.6
GTEX-11WQC-0011-R6a-SM-5BC77 60-69 years, male 426.5
GTEX-17HG3-0011-R6b-SM-79OK8 30-39 years, female 423.4
GTEX-13O3O-0011-R6b-SM-5P9GY 60-69 years, female 419.8
GTEX-18465-0011-R6a-SM-7LG6M 50-59 years, male 419.7
GTEX-13OVH-0011-R6b-SM-5LUAX 70-79 years, male 415.3
GTEX-15DCD-0011-R6b-SM-6M46L 70-79 years, female 414.8
GTEX-147GR-0011-R6b-SM-5S2RO 60-69 years, male 413.9
GTEX-16XZZ-0011-R6a-SM-7IGNE 60-69 years, male 409.7
GTEX-13FLV-0011-R6a-SM-5KLZ4 50-59 years, male 409.4
GTEX-14E7W-0011-R6b-SM-5ZZV3 70-79 years, male 409.1
GTEX-1I1GS-0011-R6b-SM-CMKHE 60-69 years, male 408.2
GTEX-12WSM-0011-R6b-SM-5EQ6N 60-69 years, male 407.1
GTEX-11PRG-0011-R6b-SM-DO923 50-59 years, male 399.9
GTEX-ZE7O-0011-R6a-SM-57WCI 50-59 years, female 398.9
GTEX-12WSF-0011-R6b-SM-5HL8W 70-79 years, male 395.3
GTEX-ZVZQ-0011-R6b-SM-57WAY 60-69 years, female 395.3
GTEX-11O72-0011-R6a-SM-DNZZQ 40-49 years, male 394.9
GTEX-1MA7X-0011-R6a-SM-EYYWR 60-69 years, male 394.0
GTEX-13SLW-0011-R6a-SM-5O9BH 70-79 years, male 392.1
GTEX-1HBPM-0011-R6b-SM-ARU73 60-69 years, female 391.5
GTEX-12ZZY-0011-R6b-SM-5EGLA 60-69 years, male 390.2
GTEX-1LC47-0011-R6b-SM-EZ6MI 60-69 years, male 389.9
GTEX-13JUV-0011-R6b-SM-5LZYG 40-49 years, female 388.4
GTEX-ZE9C-0011-R6a-SM-4WWCW 60-69 years, male 388.1
GTEX-1EX96-0011-R6a-SM-9OSVV 50-59 years, male 388.1
GTEX-WVLH-0011-R6A-SM-3MJFZ 50-59 years, male 388.0
GTEX-1H1ZS-0011-R6b-SM-A9G1F 70-79 years, male 383.3
GTEX-1HGF4-0011-R6a-SM-A96S1 60-69 years, male 380.7
GTEX-11DXW-0011-R6a-SM-DO11N 40-49 years, male 379.2
GTEX-1IDJH-0011-R6a-SM-A9SLZ 70-79 years, male 378.5
GTEX-17HHY-0011-R6b-SM-7189Z 50-59 years, male 377.9
GTEX-UTHO-0011-R6A-SM-3GIJW 60-69 years, male 376.1
GTEX-145MH-0011-R6a-SM-5PNZ7 50-59 years, male 375.3
GTEX-1GF9V-0011-R6b-SM-CJI2Q 60-69 years, male 373.7
GTEX-Q2AG-0011-R6A-SM-2HML7 40-49 years, female 373.5
GTEX-12ZZZ-0011-R6b-SM-5EQ5B 60-69 years, male 372.2
GTEX-S7SE-0011-R6A-SM-2XCD9 50-59 years, male 363.8
GTEX-1B8SF-0011-R6b-SM-7MXUD 60-69 years, male 362.4
GTEX-1399T-0011-R6b-SM-5K7YL 60-69 years, male 358.8
GTEX-R55E-0011-R6A-SM-2TC5T 20-29 years, male 358.1
GTEX-PWO3-0011-R6A-SM-2I5F3 60-69 years, female 356.7
GTEX-132Q8-0011-R6a-SM-5K7YN 60-69 years, male 356.6
GTEX-11OF3-0011-R6b-SM-57WBG 60-69 years, male 353.6
GTEX-1HBPI-0011-R6b-SM-A9G1T 50-59 years, male 352.7
GTEX-18A6Q-0011-R6a-SM-7LG6R 60-69 years, male 352.5
GTEX-14C5O-0011-R6a-SM-5YYB6 60-69 years, male 350.3
GTEX-1HBPH-0011-R6a-SM-CKZOV 40-49 years, female 349.2
GTEX-14LZ3-0011-R6a-SM-D3L8C 60-69 years, female 348.8
GTEX-1GZHY-0011-R6a-SM-9OSWL 50-59 years, female 348.0
GTEX-NL4W-0011-R6a-SM-2I3GA 50-59 years, male 347.8
GTEX-14BIM-0011-R6b-SM-5S2VB 60-69 years, female 346.9
GTEX-1192X-0011-R6a-SM-DNZZB 50-59 years, male 346.5
GTEX-XMD1-0011-R6A-SM-4AT5K 60-69 years, male 346.4
GTEX-13SLX-0011-R6a-SM-5PNX4 50-59 years, female 345.6
GTEX-1C6VR-0011-R6a-SM-7MXU8 60-69 years, male 344.7
GTEX-ZXG5-0011-R6a-SM-57WBZ 60-69 years, male 344.6
GTEX-1CB4G-0011-R6b-SM-9QEGO 60-69 years, male 343.3
GTEX-TSE9-0011-R6A-SM-3DB7L 60-69 years, female 343.0
GTEX-14JG1-0011-R6b-SM-5YYAU 40-49 years, male 340.9
GTEX-12WSH-0011-R6b-SM-5P9F4 50-59 years, male 337.5
GTEX-1H1DG-0011-R6a-SM-A9SK8 70-79 years, male 337.3
GTEX-1GF9W-0011-R6b-SM-9QEIE 60-69 years, male 333.7
GTEX-14PN4-0011-R6b-SM-69LQU 50-59 years, male 333.1
GTEX-13112-0011-R6b-SM-5DUVK 50-59 years, male 331.8
GTEX-14ABY-0011-R6a-SM-5PNWR 50-59 years, male 331.5
GTEX-1GMRU-0011-R6b-SM-A9G3B 50-59 years, male 330.5
GTEX-12ZZX-0011-R6a-SM-5HL8L 40-49 years, female 329.2
GTEX-WHSE-0011-R6A-SM-3P5ZP 20-29 years, male 326.0
GTEX-1AX9I-0011-R6a-SM-7P8PK 60-69 years, male 325.4
GTEX-1F6IF-0011-R6a-SM-9QEIO 60-69 years, male 324.4
GTEX-X585-0011-R6A-SM-46MVJ 50-59 years, male 324.0
GTEX-1F7RK-0011-R6b-SM-ARZMG 20-29 years, female 323.0
GTEX-T6MN-0011-R6A-SM-32QP8 50-59 years, male 320.6
GTEX-1GN1U-0011-R6a-SM-CKZNO 50-59 years, female 320.5
GTEX-1EMGI-0011-R6a-SM-9OSVR 60-69 years, male 318.9
GTEX-1F6I4-0011-R6a-SM-CE6R4 60-69 years, male 318.6
GTEX-13OW6-0011-R6b-SM-5L3GR 50-59 years, male 318.4
GTEX-1GZ4I-0011-R6b-SM-9WG77 50-59 years, male 317.9
GTEX-15G19-0011-R6b-SM-7KUM3 60-69 years, male 316.1
GTEX-1F75A-0011-R6b-SM-9QEHD 50-59 years, male 315.6
GTEX-13O3Q-0011-R6a-SM-5KM2V 50-59 years, male 313.7
GTEX-T2IS-0011-R6A-SM-32QP2 20-29 years, female 312.7
GTEX-17MF6-0011-R6b-SM-7LG6G 40-49 years, male 311.2
GTEX-1HR9M-0011-R6a-SM-ARU6Z 60-69 years, male 310.5
GTEX-15CHQ-0011-R6b-SM-69LOX 60-69 years, male 310.1
GTEX-1LVAO-0011-R6b-SM-EZ6MX 60-69 years, male 308.8
GTEX-17EVQ-0011-R6a-SM-7189U 70-79 years, male 308.3
GTEX-1A3MX-0011-R6a-SM-7P8S9 60-69 years, male 307.3
GTEX-1I1CD-0011-R6b-SM-CJI3Y 60-69 years, female 306.8
GTEX-13FLW-0011-R6b-SM-5L3EN 50-59 years, male 304.1
GTEX-13S7M-0011-R6b-SM-5O9D8 60-69 years, female 303.5
GTEX-13NYS-0011-R6b-SM-5MR3R 60-69 years, male 301.1
GTEX-1HT8W-0011-R6a-SM-CM2SY 30-39 years, male 298.8
GTEX-1H1CY-0011-R6b-SM-CE6RP 60-69 years, female 293.8
GTEX-WZTO-0011-R6B-SM-4E3J6 40-49 years, male 292.6
GTEX-12WSC-0011-R6b-SM-5LU99 50-59 years, male 292.4
GTEX-1H3NZ-0011-R6b-SM-A9G1N 60-69 years, male 291.8
GTEX-OHPN-0011-R6A-SM-2I5FH 60-69 years, female 290.6
GTEX-12WSE-0011-R6b-SM-5LZV5 20-29 years, male 290.5
GTEX-13X6K-0011-R6a-SM-5P9K6 60-69 years, female 290.4
GTEX-1ICLZ-0011-R6b-SM-A9G3A 60-69 years, male 289.3
GTEX-13OVL-0011-R6a-SM-5L3G4 50-59 years, male 287.4
GTEX-ZF28-0011-R6a-SM-4WKHI 60-69 years, male 286.6
GTEX-1I1GV-0011-R6b-SM-ARU6Q 60-69 years, male 285.5
GTEX-T5JC-0011-R6A-SM-D3L87 20-29 years, male 283.0
GTEX-13FXS-0011-R6b-SM-5L3F7 50-59 years, male 282.7
GTEX-17F97-0011-R6a-SM-7EPGS 50-59 years, male 280.5
GTEX-14ASI-0011-R6a-SM-5S2UZ 60-69 years, male 280.3
GTEX-P44G-0011-R6A-SM-2XCD3 30-39 years, male 280.1
GTEX-13FHO-0011-R6b-SM-5LZX1 60-69 years, male 279.0
GTEX-131XH-0011-R6a-SM-5KM2G 50-59 years, male 278.5
GTEX-13X6J-0011-R6a-SM-5PNUB 50-59 years, male 276.4
GTEX-1OJC4-0011-R6a-SM-EXOIM 50-59 years, female 273.0
GTEX-11DXY-0011-R6a-SM-DNZZF 60-69 years, male 271.9
GTEX-N7MS-0011-R6a-SM-2HMJ4 60-69 years, male 270.3
GTEX-1GMR8-0011-R6b-SM-CE6RC 50-59 years, female 268.1
GTEX-183WM-0011-R6b-SM-72D66 70-79 years, female 265.3
GTEX-1LH75-0011-R6a-SM-EXURS 50-59 years, female 264.2
GTEX-145LS-0011-R6b-SM-5PNWL 60-69 years, female 262.9
GTEX-1B933-0011-R6b-SM-79OOQ 50-59 years, female 260.3
GTEX-18464-0011-R6a-SM-731CA 50-59 years, male 256.1
GTEX-14PJM-0011-R6a-SM-6872G 50-59 years, female 252.2
GTEX-15RJE-0011-R6a-SM-7DHL8 40-49 years, male 251.1
GTEX-13VXU-0011-R6a-SM-5SI71 50-59 years, male 250.2
GTEX-144GL-0011-R6a-SM-5P9HW 50-59 years, male 250.0
GTEX-1HB9E-0011-R6b-SM-A9G1P 50-59 years, male 249.9
GTEX-NPJ8-0011-R6a-SM-2HMKB 40-49 years, male 249.8
GTEX-14JIY-0011-R6b-SM-68714 60-69 years, male 249.4
GTEX-QVJO-0011-R6A-SM-2S1QN 60-69 years, female 246.7
GTEX-1JMLX-0011-R6b-SM-EXUT9 50-59 years, male 244.0
GTEX-WWYW-0011-R6A-SM-3NB3G 50-59 years, female 243.9
GTEX-17EVP-0011-R6b-SM-7LT99 40-49 years, male 238.9
GTEX-14PQA-0011-R6b-SM-6AJAM 50-59 years, female 238.5
GTEX-NL3H-0011-R6a-SM-2I3G8 60-69 years, male 236.0
GTEX-1B8L1-0011-R6b-SM-7P8SU 60-69 years, male 235.4
GTEX-1B996-0011-R6b-SM-793AQ 60-69 years, male 232.0
GTEX-NPJ7-0011-R6a-SM-2I3G7 60-69 years, female 232.0
GTEX-1F75W-0011-R6a-SM-9QEI5 60-69 years, male 229.0
GTEX-1GN73-0011-R6b-SM-CJI2T 60-69 years, male 225.4
GTEX-13N2G-0011-R6b-SM-5MR3P 60-69 years, male 225.3
GTEX-Z93S-0011-R6b-SM-4RGNJ 50-59 years, male 219.6
GTEX-15ER7-0011-R6a-SM-6M46M 20-29 years, female 219.1
GTEX-14BMV-0011-R6b-SM-5YY9I 50-59 years, male 215.3
GTEX-13RTJ-0011-R6a-SM-5SI74 60-69 years, male 211.9
GTEX-16YQH-0011-R6b-SM-7938T 30-39 years, male 209.7
GTEX-1313W-0011-R6a-SM-5K7XO 50-59 years, female 190.0
GTEX-QMR6-0011-R6A-SM-32PKP 50-59 years, male 189.5
GTEX-1J1OQ-0011-R6a-SM-ARU86 40-49 years, female 187.2
GTEX-XLM4-0011-R6A-SM-4AT4B 60-69 years, male 175.5
GTEX-12WSD-0011-R6b-SM-5P9JU 60-69 years, female 155.4
GTEX-14BIN-0011-R6a-SM-5S2RH 50-59 years, female 146.5
GTEX-X4EP-0011-R6A-SM-3P629 60-69 years, female 124.3
Show allShow less
Brain - Putamen (basal ganglia)
Average nTPM: 668.9
Samples: 205

Max nTPM: 1365.3
Min nTPM: 233.9
Std nTPM: 236.6
Median nTPM: 620.1
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 1365.3
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 1337.5
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 1295.6
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 1247.4
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 1245.4
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 1233.8
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 1226.5
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 1183.7
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 1165.8
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 1137.7
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 1122.2
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 1108.2
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 1092.1
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 1068.5
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 1054.4
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 1051.3
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 1051.2
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 1050.2
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 1042.6
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 1015.6
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 1011.1
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 998.1
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 986.9
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 985.7
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 975.7
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 968.6
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 957.3
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 951.9
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 945.4
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 942.1
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 936.2
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 919.9
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 917.1
GTEX-RU72-0011-R7A-SM-2TF5U 50-59 years, female 913.7
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 913.1
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 900.6
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 894.9
GTEX-NL3H-0011-R7a-SM-2I3G5 60-69 years, male 890.8
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 889.5
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 888.8
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 885.0
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 882.6
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 872.8
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 869.7
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 856.9
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 832.6
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 832.3
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 823.4
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 821.3
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 815.6
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 815.3
GTEX-1IOXB-0011-R7b-SM-CE6SM 50-59 years, male 815.1
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 813.9
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 812.8
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 811.9
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 810.5
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 805.7
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 797.8
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 784.3
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 782.3
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 779.2
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 764.3
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 759.1
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 749.7
GTEX-TSE9-0011-R7A-SM-3DB7P 60-69 years, female 748.7
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 745.5
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 744.0
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 737.8
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 733.7
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 720.0
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 715.1
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 711.6
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 711.5
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 709.1
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 705.3
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 699.4
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 696.9
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 693.5
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 690.4
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 689.4
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 688.7
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 686.5
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 684.2
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 683.8
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 683.4
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 681.6
GTEX-18464-0011-R7b-SM-731CM 50-59 years, male 673.0
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 671.3
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 670.5
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 670.0
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 666.9
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 662.4
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 659.5
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 649.8
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 648.5
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 645.6
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 643.1
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 638.9
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 636.3
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 634.4
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 626.6
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 622.6
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 620.1
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 616.2
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 615.6
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 610.0
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 610.0
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 609.7
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 607.8
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 603.2
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 598.2
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 593.1
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 585.7
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 578.7
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 576.1
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 574.9
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 571.1
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 571.0
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 567.7
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 566.3
GTEX-NPJ8-0011-R7a-SM-2HMJV 40-49 years, male 565.6
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 564.7
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 564.2
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 561.2
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 557.8
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 554.5
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 552.5
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 552.4
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 551.5
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 549.4
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 546.6
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 546.4
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 545.0
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 544.6
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 543.6
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 543.6
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 542.8
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 541.4
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 539.9
GTEX-P44G-0011-R7A-SM-2I3F9 30-39 years, male 539.0
GTEX-N7MS-0011-R7a-SM-2HMKN 60-69 years, male 537.7
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 535.0
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 531.7
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 527.5
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 527.5
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 522.4
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 521.6
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 520.3
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 519.1
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 514.2
GTEX-OHPN-0011-R7A-SM-2I5FI 60-69 years, female 509.5
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 502.8
GTEX-R55E-0011-R7A-SM-2TC5Z 20-29 years, male 501.5
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 500.6
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 495.5
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 492.2
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 485.2
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 484.4
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 483.5
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 483.3
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 480.9
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 470.8
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 470.3
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 467.6
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 467.2
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 463.3
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 463.1
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 455.7
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 448.5
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 446.5
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 444.7
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 443.9
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 443.8
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 443.5
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 439.3
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 438.6
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 436.2
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 435.8
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 432.3
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 425.9
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 415.6
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 414.3
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 401.0
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 395.9
GTEX-S7SE-0011-R7A-SM-2XCDI 50-59 years, male 395.1
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 393.2
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 390.7
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 388.4
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 378.4
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 378.2
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 374.1
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 373.4
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 373.0
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 368.4
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 364.9
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 358.8
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 334.2
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 330.9
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 314.5
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 303.9
GTEX-1J1OQ-0011-R7b-SM-ARU87 40-49 years, female 282.8
GTEX-QVJO-0011-R7A-SM-2S1QO 60-69 years, female 282.2
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 272.0
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 261.8
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 233.9
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BASAL GANGLIA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

901.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 617.3
FF:10164-103B2 76 years, female 617.3
Nucleus accumbens
Scaled Tags Per Million: 726.4
FF:10037-101F1 23-56 years, mixed 726.4
Putamen
Scaled Tags Per Million: 430.8
FF:10176-103C5 60 years, female 430.8
Globus pallidus
Scaled Tags Per Million: 901.5
FF:10161-103A8 76 years, female 979.9
FF:10175-103C4 60 years, female 823.2

BASAL GANGLIA - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

332.9
Pig sample Sample description nTPM
Caudate
nTPM: 145.2
Samples: 4

Max nTPM: 172.6
Min nTPM: 128.1
Sample A Female 131.2
Sample B Female 148.9
Sample C Male 172.6
Sample D Male 128.1
Putamen
nTPM: 333.0
Samples: 4

Max nTPM: 516.1
Min nTPM: 196.6
Sample A Female 516.1
Sample B Female 196.6
Sample C Male 281.6
Sample D Male 337.5
Septum
nTPM: 220.6
Samples: 4

Max nTPM: 248.0
Min nTPM: 160.6
Sample A Female 231.0
Sample B Female 160.6
Sample C Male 248.0
Sample D Male 242.8
Ventral pallidum
nTPM: 246.2
Samples: 4

Max nTPM: 344.8
Min nTPM: 121.8
Sample A Female 121.8
Sample B Female 240.5
Sample C Male 344.8
Sample D Male 277.5

BASAL GANGLIA - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

395.4
Mouse sample Sample description nTPM
Caudate putamen
nTPM: 395.4
Samples: 4

Max nTPM: 404.0
Min nTPM: 385.2
Sample A Male 401.3
Sample B Male 404.0
Sample C Female 391.2
Sample D Female 385.2
Septum
nTPM: 353.5
Samples: 4

Max nTPM: 382.0
Min nTPM: 288.0
Sample A Male 288.0
Sample B Male 362.2
Sample C Female 381.7
Sample D Female 382.0
Ventral forebrain
nTPM: 304.3
Samples: 4

Max nTPM: 359.2
Min nTPM: 280.6
Sample A Male 280.8
Sample B Male 296.4
Sample C Female 359.2
Sample D Female 280.6

BASAL GANGLIA - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

6.7
Allen experiment id Experiment description Expression energy
Striatum
Expression energy: 4.7
68269598 Antisense, RP_041129_01_H05, Mouse strain C57BL/6J (56 days, male) 5.2
2130 Antisense, RP_Baylor_102712, Mouse strain C57BL/6J (56 days, male) 4.2
2129 Antisense, RP_Baylor_102712, Mouse strain C57BL/6J (56 days, male) 2.8
Pallidum
Expression energy: 6.7
68269598 Antisense, RP_041129_01_H05, Mouse strain C57BL/6J (56 days, male) 7.9
2130 Antisense, RP_Baylor_102712, Mouse strain C57BL/6J (56 days, male) 5.5
2129 Antisense, RP_Baylor_102712, Mouse strain C57BL/6J (56 days, male) 4.4

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