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BRAIN BASAL GANGLIA Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS MEDULLA OBLONGATA
MIDBRAIN OLFACTORY BULB PITUITARY GLAND PONS RETINA SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
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VALIDATION
Brain proteome
Basal ganglia
BASAL GANGLIA - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glial cells: Low
Neuronal cells: Low
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:195.4 nTPM
HPA Brain:278.6 nTPM
GTEx:195.4 nTPM
FANTOM5:842.7 Scaled Tags Per Million
Pig:386.0 nTPM
Mouse:164.2 nTPM
Allen mouse:8.7 Expression energy

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA038186
Glial cells Low
Neuronal cells Low



BASAL GANGLIA - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

278.6
Sample id Sample description nTPM
Caudate nucleus
nTPM: 265.1
2290 Female, age 72, unknown 378.6
1857 Female, age 85, left hemisphere 307.5
2846 Female, age 79, unknown 306.3
1781 Male, age 74, unknown 276.6
2288 Male, age 75, left hemisphere 247.3
2289 Male, age 61, right hemisphere 247.3
1854 Male, age 80, left hemisphere 188.5
2481 Female, age 94, left hemisphere 168.2
Globus pallidus, externus
nTPM: 75.0
2395 Male, age 75, both hemispheres 98.2
2646 Male, age 61, right hemisphere 82.1
1996 Male, age 80, right hemisphere 69.3
2567 Female, age 72, unknown 66.6
2772 Female, age 79, unknown 58.9
Globus pallidus, internus
nTPM: 70.3
2483 Female, age 94, right hemisphere 139.5
2287 Male, age 75, right hemisphere 82.5
2566 Female, age 72, unknown 70.3
2037 Male, age 80, right hemisphere 68.7
2778 Female, age 91, both hemispheres 48.2
1818 Male, age 74, unknown 47.2
2111 Female, age 85, right hemisphere 35.8
Nucleus accumbens
nTPM: 236.6
1783 Male, age 74, unknown 361.3
2698 Female, age 72, unknown 327.8
1806 Female, age 85, left hemisphere 316.9
1856 Female, age 91, right hemisphere 240.3
2824 Male, age 61, right hemisphere 192.6
2732 Male, age 80, right hemisphere 180.7
2286 Male, age 75, left hemisphere 172.8
2391 Female, age 94, left hemisphere 100.5
Nucleus basalis of Meynert
nTPM: 181.3
2821 Male, age 75, both hemispheres 235.0
2484 Female, age 94, left hemisphere 205.7
2393 Male, age 80, right hemisphere 173.0
2569 Male, age 61, both hemispheres 111.7
Nucleus of the diagonal band
nTPM: 278.6
2195 Female, age 85, both hemispheres 356.8
2775 Male, age 80, right hemisphere 295.0
1979 Male, age 74, unknown 277.4
1812 Female, age 91, both hemispheres 271.2
2029 Male, age 61, right hemisphere 192.3
Putamen
nTPM: 229.4
1829 Male, age 74, unknown 274.2
1838 Male, age 80, right hemisphere 270.5
2489 Female, age 72, unknown 239.7
2466 Female, age 79, unknown 236.7
1937 Female, age 91, right hemisphere 219.4
2647 Male, age 75, left hemisphere 217.7
2482 Female, age 94, left hemisphere 147.8
Septal nuclei
nTPM: 263.2
1960 Male, age 74, unknown 430.0
2059 Female, age 85, both hemispheres 350.8
2031 Female, age 72, unknown 284.6
2629 Female, age 94, right hemisphere 239.6
2009 Female, age 91, both hemispheres 223.1
2199 Male, age 80, right hemisphere 170.3
2394 Male, age 61, left hemisphere 143.8
Stria terminalis, bed nucleus
nTPM: 200.7
1974 Female, age 91, both hemispheres 243.2
2486 Female, age 94, both hemispheres 201.7
2201 Male, age 74, unknown 157.3

BASAL GANGLIA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

195.4
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 148.9
Samples: 246

Max nTPM: 408.8
Min nTPM: 0.1
Std nTPM: 78.7
Median nTPM: 143.0
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 408.8
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 407.5
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 365.9
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 332.0
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 312.9
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 311.4
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 309.6
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 307.1
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 293.2
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 291.7
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 290.9
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 287.6
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 284.3
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 282.5
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 277.6
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 274.9
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 270.3
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 269.9
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 265.9
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 264.3
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 263.8
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 263.5
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 263.4
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 261.1
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 260.3
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 257.8
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 257.5
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 256.2
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 254.9
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 251.8
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 249.7
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 248.8
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 245.9
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 244.0
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 240.7
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 238.5
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 238.1
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 237.6
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 232.4
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 230.5
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 229.1
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 222.3
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 220.2
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 219.1
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 218.0
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 214.8
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 213.0
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 210.5
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 208.8
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 208.6
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 208.4
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 208.4
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 208.0
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 207.7
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 206.5
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 204.3
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 203.5
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 200.3
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 199.5
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 198.5
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 198.2
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 195.9
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 195.8
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 195.0
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 193.5
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 192.8
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 192.7
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 191.9
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 187.2
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 187.1
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 184.8
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 184.2
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 183.8
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 183.6
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 183.5
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 182.9
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 182.8
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 182.6
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 182.2
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 182.0
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 181.7
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 179.2
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 178.5
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 178.2
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 178.2
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 176.5
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 174.2
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 172.8
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 172.2
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 172.0
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 172.0
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 171.7
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 169.8
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 169.0
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 168.9
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 168.8
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 167.2
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 165.0
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 163.3
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 161.4
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 161.4
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 161.0
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 160.6
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 160.3
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 160.2
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 160.0
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 159.8
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 159.0
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 157.3
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 155.4
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 154.8
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 152.9
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 152.1
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 150.7
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 150.3
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 147.2
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 146.7
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 146.6
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 146.2
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 145.9
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 145.8
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 144.8
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 143.4
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 142.7
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 142.0
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 141.5
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 140.7
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 138.4
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 138.3
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 137.4
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 136.9
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 136.4
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 135.5
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 135.1
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 133.7
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 132.9
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 132.7
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 132.6
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 132.6
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 131.6
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 130.0
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 129.3
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 128.2
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 128.1
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 127.9
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 127.8
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 127.3
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 126.6
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 126.3
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 125.7
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 125.0
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 124.4
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 124.0
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 123.6
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 120.1
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 119.5
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 118.0
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 117.6
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 116.4
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 116.2
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 115.7
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 112.4
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 112.2
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 111.9
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 110.6
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 109.8
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 109.6
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 108.8
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 105.9
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 105.7
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 105.2
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 104.4
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 103.5
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 102.6
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 100.5
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 100.4
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 99.5
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 97.7
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 97.6
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 95.7
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 95.4
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 93.6
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 89.9
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 88.7
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 88.5
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 88.5
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 88.0
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 87.8
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 87.0
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 86.2
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 83.4
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 81.7
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 80.9
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 80.5
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 79.5
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 78.7
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 77.1
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 75.2
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 75.2
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 75.1
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 73.6
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 71.9
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 71.6
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 71.0
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 70.9
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 69.0
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 68.2
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 66.0
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 65.6
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 65.1
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 64.3
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 62.8
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 62.5
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 61.3
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 60.9
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 59.6
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 57.7
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 57.4
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 57.3
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 56.7
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 54.0
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 52.6
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 52.1
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 52.0
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 51.5
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 46.3
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 40.9
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 40.6
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 38.3
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 34.5
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 31.7
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 30.2
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 28.8
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 27.2
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 27.1
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 22.9
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 19.3
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 18.1
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 16.6
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 12.4
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 10.7
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 1.8
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 1.4
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 1.0
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 0.3
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 0.1
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Brain - Nucleus accumbens (basal ganglia)
Average nTPM: 195.4
Samples: 246

Max nTPM: 464.1
Min nTPM: 0.0
Std nTPM: 99.7
Median nTPM: 193.8
GTEX-13FHO-0011-R6b-SM-5LZX1 60-69 years, male 464.1
GTEX-12WSH-0011-R6b-SM-5P9F4 50-59 years, male 421.0
GTEX-12ZZX-0011-R6a-SM-5HL8L 40-49 years, female 412.4
GTEX-1HUB1-0011-R6b-SM-ARU6W 60-69 years, male 411.5
GTEX-12WSF-0011-R6b-SM-5HL8W 70-79 years, male 400.8
GTEX-1BAJH-0011-R6b-SM-7MXT2 70-79 years, male 394.7
GTEX-1I1CD-0011-R6b-SM-CJI3Y 60-69 years, female 391.9
GTEX-1F75A-0011-R6b-SM-9QEHD 50-59 years, male 381.6
GTEX-1B8SF-0011-R6b-SM-7MXUD 60-69 years, male 369.7
GTEX-1GMRU-0011-R6b-SM-A9G3B 50-59 years, male 360.2
GTEX-1HR9M-0011-R6a-SM-ARU6Z 60-69 years, male 359.1
GTEX-1F75W-0011-R6a-SM-9QEI5 60-69 years, male 355.8
GTEX-1AX9I-0011-R6a-SM-7P8PK 60-69 years, male 348.2
GTEX-13FLV-0011-R6a-SM-5KLZ4 50-59 years, male 345.4
GTEX-1C6VR-0011-R6a-SM-7MXU8 60-69 years, male 340.7
GTEX-14ASI-0011-R6a-SM-5S2UZ 60-69 years, male 338.9
GTEX-13O3Q-0011-R6a-SM-5KM2V 50-59 years, male 335.7
GTEX-13FLW-0011-R6b-SM-5L3EN 50-59 years, male 334.9
GTEX-1J8Q2-0011-R6a-SM-CKZPG 60-69 years, male 333.4
GTEX-13X6J-0011-R6a-SM-5PNUB 50-59 years, male 330.9
GTEX-1F6I4-0011-R6a-SM-CE6R4 60-69 years, male 329.3
GTEX-17F97-0011-R6a-SM-7EPGS 50-59 years, male 328.0
GTEX-1OJC4-0011-R6a-SM-EXOIM 50-59 years, female 326.3
GTEX-1IDJH-0011-R6a-SM-A9SLZ 70-79 years, male 325.4
GTEX-12WSC-0011-R6b-SM-5LU99 50-59 years, male 324.4
GTEX-12ZZZ-0011-R6b-SM-5EQ5B 60-69 years, male 323.3
GTEX-1CB4G-0011-R6b-SM-9QEGO 60-69 years, male 316.9
GTEX-1B8L1-0011-R6b-SM-7P8SU 60-69 years, male 316.1
GTEX-12WSE-0011-R6b-SM-5LZV5 20-29 years, male 312.0
GTEX-12ZZY-0011-R6b-SM-5EGLA 60-69 years, male 311.2
GTEX-1A3MX-0011-R6a-SM-7P8S9 60-69 years, male 310.5
GTEX-1LVAO-0011-R6b-SM-EZ6MX 60-69 years, male 310.2
GTEX-18A6Q-0011-R6a-SM-7LG6R 60-69 years, male 308.2
GTEX-18464-0011-R6a-SM-731CA 50-59 years, male 307.5
GTEX-1HGF4-0011-R6a-SM-A96S1 60-69 years, male 306.9
GTEX-11NV4-0011-R6a-SM-57WD5 60-69 years, male 305.7
GTEX-TSE9-0011-R6A-SM-3DB7L 60-69 years, female 304.4
GTEX-14PJM-0011-R6a-SM-6872G 50-59 years, female 304.3
GTEX-13N2G-0011-R6b-SM-5MR3P 60-69 years, male 301.4
GTEX-1GZ4I-0011-R6b-SM-9WG77 50-59 years, male 298.4
GTEX-15RJE-0011-R6a-SM-7DHL8 40-49 years, male 296.7
GTEX-12WSM-0011-R6b-SM-5EQ6N 60-69 years, male 296.1
GTEX-1HBPI-0011-R6b-SM-A9G1T 50-59 years, male 295.6
GTEX-15CHQ-0011-R6b-SM-69LOX 60-69 years, male 294.3
GTEX-11OF3-0011-R6b-SM-57WBG 60-69 years, male 293.7
GTEX-145LU-0011-R6a-SM-5S2V6 50-59 years, male 293.4
GTEX-1F6IF-0011-R6a-SM-9QEIO 60-69 years, male 292.7
GTEX-13S7M-0011-R6b-SM-5O9D8 60-69 years, female 292.0
GTEX-1GZ2Q-0011-R6a-SM-9OSWM 40-49 years, male 290.1
GTEX-14JIY-0011-R6b-SM-68714 60-69 years, male 288.2
GTEX-13OVL-0011-R6a-SM-5L3G4 50-59 years, male 288.1
GTEX-17MF6-0011-R6b-SM-7LG6G 40-49 years, male 288.0
GTEX-14JG1-0011-R6b-SM-5YYAU 40-49 years, male 286.9
GTEX-13QJC-0011-R6a-SM-5S2VI 60-69 years, female 282.0
GTEX-1I1GR-0011-R6a-SM-CMKHI 60-69 years, male 280.9
GTEX-14BMV-0011-R6b-SM-5YY9I 50-59 years, male 280.6
GTEX-14BIM-0011-R6b-SM-5S2VB 60-69 years, female 277.8
GTEX-13O3O-0011-R6b-SM-5P9GY 60-69 years, female 277.7
GTEX-145LS-0011-R6b-SM-5PNWL 60-69 years, female 277.0
GTEX-1ICLZ-0011-R6b-SM-A9G3A 60-69 years, male 276.6
GTEX-1EX96-0011-R6a-SM-9OSVV 50-59 years, male 274.3
GTEX-1IY9M-0011-R6a-SM-D4P28 60-69 years, male 273.5
GTEX-13VXU-0011-R6a-SM-5SI71 50-59 years, male 272.9
GTEX-1GTWX-0011-R6a-SM-A96RN 60-69 years, male 269.8
GTEX-1IKK5-0011-R6b-SM-A9SLY 60-69 years, male 265.4
GTEX-1F7RK-0011-R6b-SM-ARZMG 20-29 years, female 262.7
GTEX-13IVO-0011-R6b-SM-5K7X9 70-79 years, male 262.6
GTEX-1313W-0011-R6a-SM-5K7XO 50-59 years, female 261.6
GTEX-13FHP-0011-R6b-SM-5LZY6 50-59 years, male 261.4
GTEX-11DZ1-0011-R6b-SM-DNZZG 50-59 years, male 260.8
GTEX-14PN4-0011-R6b-SM-69LQU 50-59 years, male 260.6
GTEX-13NYB-0011-R6b-SM-5MR51 40-49 years, male 260.4
GTEX-144GO-0011-R6b-SM-5S2V7 60-69 years, male 259.2
GTEX-1J1OQ-0011-R6a-SM-ARU86 40-49 years, female 257.7
GTEX-X585-0011-R6A-SM-46MVJ 50-59 years, male 256.3
GTEX-1GMR8-0011-R6b-SM-CE6RC 50-59 years, female 255.9
GTEX-1GN1U-0011-R6a-SM-CKZNO 50-59 years, female 253.6
GTEX-1I1GV-0011-R6b-SM-ARU6Q 60-69 years, male 250.0
GTEX-1GN73-0011-R6b-SM-CJI2T 60-69 years, male 248.9
GTEX-1GF9V-0011-R6b-SM-CJI2Q 60-69 years, male 248.8
GTEX-1E1VI-0011-R6a-SM-9OSVJ 50-59 years, male 248.0
GTEX-13112-0011-R6b-SM-5DUVK 50-59 years, male 247.7
GTEX-11DXY-0011-R6a-SM-DNZZF 60-69 years, male 244.0
GTEX-131XH-0011-R6a-SM-5KM2G 50-59 years, male 243.9
GTEX-14ABY-0011-R6a-SM-5PNWR 50-59 years, male 242.7
GTEX-1B933-0011-R6b-SM-79OOQ 50-59 years, female 242.6
GTEX-1MA7X-0011-R6a-SM-EYYWR 60-69 years, male 240.6
GTEX-14E7W-0011-R6b-SM-5ZZV3 70-79 years, male 239.4
GTEX-1GF9W-0011-R6b-SM-9QEIE 60-69 years, male 237.8
GTEX-1JJEA-0011-R6a-SM-EXUS1 60-69 years, male 236.0
GTEX-13JVG-0011-R6a-SM-5MR3E 60-69 years, male 234.5
GTEX-15ER7-0011-R6a-SM-6M46M 20-29 years, female 234.3
GTEX-13RTJ-0011-R6a-SM-5SI74 60-69 years, male 233.7
GTEX-1H1ZS-0011-R6b-SM-A9G1F 70-79 years, male 231.9
GTEX-145MH-0011-R6a-SM-5PNZ7 50-59 years, male 231.3
GTEX-1H3NZ-0011-R6b-SM-A9G1N 60-69 years, male 231.0
GTEX-144GL-0011-R6a-SM-5P9HW 50-59 years, male 230.6
GTEX-139TT-0011-R6b-SM-5J2ON 60-69 years, male 230.2
GTEX-1H1CY-0011-R6b-SM-CE6RP 60-69 years, female 229.2
GTEX-1HBPH-0011-R6a-SM-CKZOV 40-49 years, female 228.5
GTEX-147F4-0011-R6b-SM-5S2UP 50-59 years, male 228.2
GTEX-13OW6-0011-R6b-SM-5L3GR 50-59 years, male 225.1
GTEX-14PQA-0011-R6b-SM-6AJAM 50-59 years, female 224.7
GTEX-13NYS-0011-R6b-SM-5MR3R 60-69 years, male 219.2
GTEX-1N2DW-0011-R6a-SM-EZ6MW 50-59 years, male 215.3
GTEX-1HB9E-0011-R6b-SM-A9G1P 50-59 years, male 213.7
GTEX-ZXG5-0011-R6a-SM-57WBZ 60-69 years, male 212.6
GTEX-ZE9C-0011-R6a-SM-4WWCW 60-69 years, male 212.2
GTEX-S7SE-0011-R6A-SM-2XCD9 50-59 years, male 210.5
GTEX-ZDXO-0011-R6a-SM-4WWCT 60-69 years, male 208.9
GTEX-N7MS-0011-R6a-SM-2HMJ4 60-69 years, male 208.1
GTEX-13SLX-0011-R6a-SM-5PNX4 50-59 years, female 208.0
GTEX-13G51-0011-R6b-SM-5LZX4 60-69 years, male 206.2
GTEX-13X6K-0011-R6a-SM-5P9K6 60-69 years, female 204.8
GTEX-17HG3-0011-R6b-SM-79OK8 30-39 years, female 201.9
GTEX-1EMGI-0011-R6a-SM-9OSVR 60-69 years, male 201.9
GTEX-13JUV-0011-R6b-SM-5LZYG 40-49 years, female 201.0
GTEX-1GN2E-0011-R6b-SM-9QEII 60-69 years, male 200.5
GTEX-16YQH-0011-R6b-SM-7938T 30-39 years, male 198.1
GTEX-12ZZW-0011-R6a-SM-5DUVZ 50-59 years, male 197.5
GTEX-11O72-0011-R6a-SM-DNZZQ 40-49 years, male 195.4
GTEX-XLM4-0011-R6A-SM-4AT4B 60-69 years, male 194.8
GTEX-132Q8-0011-R6a-SM-5K7YN 60-69 years, male 193.8
GTEX-X4XX-0011-R6B-SM-46MWP 60-69 years, male 193.8
GTEX-1I1GS-0011-R6b-SM-CMKHE 60-69 years, male 193.0
GTEX-1HT8W-0011-R6a-SM-CM2SY 30-39 years, male 192.1
GTEX-14C5O-0011-R6a-SM-5YYB6 60-69 years, male 189.0
GTEX-1399T-0011-R6b-SM-5K7YL 60-69 years, male 188.9
GTEX-1B996-0011-R6b-SM-793AQ 60-69 years, male 188.4
GTEX-1MJK2-0011-R6a-SM-EXUS3 50-59 years, male 188.4
GTEX-WZTO-0011-R6B-SM-4E3J6 40-49 years, male 187.8
GTEX-1R46S-0011-R6a-SM-EZ6N6 60-69 years, female 187.8
GTEX-Z93S-0011-R6b-SM-4RGNJ 50-59 years, male 187.4
GTEX-11WQC-0011-R6a-SM-5BC77 60-69 years, male 186.7
GTEX-17EVP-0011-R6b-SM-7LT99 40-49 years, male 184.4
GTEX-13FXS-0011-R6b-SM-5L3F7 50-59 years, male 184.3
GTEX-1F88E-0011-R6a-SM-CKZNW 60-69 years, female 183.2
GTEX-WHSE-0011-R6A-SM-3P5ZP 20-29 years, male 181.9
GTEX-P44G-0011-R6A-SM-2XCD3 30-39 years, male 179.0
GTEX-15DYW-0011-R6b-SM-6PALA 60-69 years, female 177.1
GTEX-N7MT-0011-R6a-SM-2I3G3 60-69 years, female 177.1
GTEX-1GZHY-0011-R6a-SM-9OSWL 50-59 years, female 176.4
GTEX-17EVQ-0011-R6a-SM-7189U 70-79 years, male 176.0
GTEX-11NUK-0011-R6a-SM-DO93O 50-59 years, male 167.4
GTEX-11ONC-0011-R6a-SM-DO12A 60-69 years, male 167.0
GTEX-18465-0011-R6a-SM-7LG6M 50-59 years, male 165.9
GTEX-R55E-0011-R6A-SM-2TC5T 20-29 years, male 165.9
GTEX-183WM-0011-R6b-SM-72D66 70-79 years, female 165.4
GTEX-1H4P4-0011-R6a-SM-ARZLR 50-59 years, male 164.8
GTEX-1I1GQ-0011-R6b-SM-CE6SE 50-59 years, male 163.9
GTEX-Q2AG-0011-R6A-SM-2HML7 40-49 years, female 163.7
GTEX-1HBPM-0011-R6b-SM-ARU73 60-69 years, female 162.5
GTEX-T5JC-0011-R6A-SM-D3L87 20-29 years, male 160.7
GTEX-1LH75-0011-R6a-SM-EXURS 50-59 years, female 160.4
GTEX-14LZ3-0011-R6a-SM-D3L8C 60-69 years, female 159.5
GTEX-13OW8-0011-R6b-SM-5L3I3 60-69 years, male 157.0
GTEX-WWYW-0011-R6A-SM-3NB3G 50-59 years, female 156.4
GTEX-12WSD-0011-R6b-SM-5P9JU 60-69 years, female 156.1
GTEX-NPJ7-0011-R6a-SM-2I3G7 60-69 years, female 155.6
GTEX-13OVJ-0011-R6b-SM-5L3GH 50-59 years, female 155.2
GTEX-T2IS-0011-R6A-SM-32QP2 20-29 years, female 152.0
GTEX-T6MN-0011-R6A-SM-32QP8 50-59 years, male 149.9
GTEX-1H1DG-0011-R6a-SM-A9SK8 70-79 years, male 148.3
GTEX-11TTK-0011-R6b-SM-DNZZW 60-69 years, female 147.4
GTEX-15DCD-0011-R6b-SM-6M46L 70-79 years, female 146.5
GTEX-1LVA9-0011-R6a-SM-EYYWH 50-59 years, male 144.5
GTEX-1JMLX-0011-R6b-SM-EXUT9 50-59 years, male 144.4
GTEX-ZVZQ-0011-R6b-SM-57WAY 60-69 years, female 144.2
GTEX-13OW5-0011-R6b-SM-5O9BW 60-69 years, male 142.9
GTEX-1445S-0011-R6b-SM-5PNUF 60-69 years, male 141.1
GTEX-1IGQW-0011-R6a-SM-CM2TC 60-69 years, male 140.4
GTEX-1F48J-0011-R6a-SM-CJI2F 50-59 years, female 138.2
GTEX-NL4W-0011-R6a-SM-2I3GA 50-59 years, male 137.9
GTEX-UTHO-0011-R6A-SM-3GIJW 60-69 years, male 137.8
GTEX-NL3H-0011-R6a-SM-2I3G8 60-69 years, male 137.2
GTEX-1192X-0011-R6a-SM-DNZZB 50-59 years, male 136.9
GTEX-17HHY-0011-R6b-SM-7189Z 50-59 years, male 135.7
GTEX-QMR6-0011-R6A-SM-32PKP 50-59 years, male 134.5
GTEX-11PRG-0011-R6b-SM-DO923 50-59 years, male 133.7
GTEX-13SLW-0011-R6a-SM-5O9BH 70-79 years, male 132.5
GTEX-ZVT3-0011-R6a-SM-51MSU 60-69 years, female 131.4
GTEX-WVLH-0011-R6A-SM-3MJFZ 50-59 years, male 129.1
GTEX-1IL2U-0011-R6a-SM-ARZLG 60-69 years, male 125.5
GTEX-139TS-0011-R6a-SM-5J2OB 60-69 years, male 123.5
GTEX-ZV68-0011-R6a-SM-51MSR 50-59 years, female 120.7
GTEX-1I19N-0011-R6b-SM-CY8GC 70-79 years, male 120.3
GTEX-17JCI-0011-R6a-SM-72D6D 60-69 years, female 119.4
GTEX-1I1HK-0011-R6b-SM-CM2T9 60-69 years, male 117.8
GTEX-Y8DK-0011-R6A-SM-4V6EG 60-69 years, male 117.6
GTEX-1H3VE-0011-R6b-SM-A9G1M 40-49 years, male 114.7
GTEX-1LB8K-0011-R6a-SM-EXURT 50-59 years, male 113.7
GTEX-ZE7O-0011-R6a-SM-57WCI 50-59 years, female 112.4
GTEX-14753-0011-R6b-SM-5S2UD 60-69 years, male 107.9
GTEX-YJ89-0011-R6a-SM-4V6GN 60-69 years, male 107.9
GTEX-QVJO-0011-R6A-SM-2S1QN 60-69 years, female 106.9
GTEX-11DXW-0011-R6a-SM-DO11N 40-49 years, male 106.6
GTEX-NPJ8-0011-R6a-SM-2HMKB 40-49 years, male 104.7
GTEX-ZF28-0011-R6a-SM-4WKHI 60-69 years, male 99.2
GTEX-13N1W-0011-R6a-SM-5MR43 70-79 years, male 98.2
GTEX-RU72-0011-R6A-SM-2TF71 50-59 years, female 98.1
GTEX-145MI-0011-R6a-SM-5PNZA 60-69 years, female 97.4
GTEX-1EWIQ-0011-R6a-SM-ARU8G 70-79 years, female 96.1
GTEX-13PL6-0011-R6a-SM-5O9C5 40-49 years, female 94.7
GTEX-1EKGG-0011-R6a-SM-CL538 60-69 years, male 94.0
GTEX-1C6WA-0011-R6a-SM-7PBYP 60-69 years, male 93.3
GTEX-WL46-0011-R6A-SM-3LK6X 50-59 years, male 91.3
GTEX-13PDP-0011-R6b-SM-5O9D5 60-69 years, male 89.6
GTEX-QVUS-0011-R6A-SM-3GACX 60-69 years, female 87.1
GTEX-16XZZ-0011-R6a-SM-7IGNE 60-69 years, male 86.2
GTEX-1EH9U-0011-R6a-SM-CJI2C 60-69 years, male 83.4
GTEX-11GSP-0011-R6b-SM-57WBQ 60-69 years, female 83.1
GTEX-13OVH-0011-R6b-SM-5LUAX 70-79 years, male 75.1
GTEX-1H3O1-0011-R6b-SM-CL54U 60-69 years, male 74.7
GTEX-X4EP-0011-R6A-SM-3P629 60-69 years, female 64.6
GTEX-11DYG-0011-R6a-SM-DO936 60-69 years, male 64.3
GTEX-1LC47-0011-R6b-SM-EZ6MI 60-69 years, male 63.2
GTEX-1IKOH-0011-R6b-SM-A9G1W 60-69 years, female 61.1
GTEX-15G19-0011-R6b-SM-7KUM3 60-69 years, male 60.8
GTEX-ZUA1-0011-R6b-SM-4YCDD 40-49 years, male 57.9
GTEX-15EO6-0011-R6a-SM-7KULK 50-59 years, male 57.5
GTEX-XMD1-0011-R6A-SM-4AT5K 60-69 years, male 56.0
GTEX-1CB4J-0011-R6b-SM-9WG7B 60-69 years, male 55.1
GTEX-16Z82-0011-R6a-SM-7IGLV 60-69 years, male 53.0
GTEX-PWO3-0011-R6A-SM-2I5F3 60-69 years, female 52.3
GTEX-14BIN-0011-R6a-SM-5S2RH 50-59 years, female 49.9
GTEX-QDT8-0011-R6A-SM-32PKI 30-39 years, female 49.8
GTEX-14PHW-0011-R6b-SM-5YYAR 60-69 years, female 48.9
GTEX-YFC4-0011-R6b-SM-4V6E1 40-49 years, female 48.2
GTEX-OHPN-0011-R6A-SM-2I5FH 60-69 years, female 36.8
GTEX-ZAB4-0011-R6a-SM-4SOKD 40-49 years, male 36.5
GTEX-P44H-0011-R6A-SM-2XCF3 40-49 years, male 34.6
GTEX-1E2YA-0011-R6b-SM-CE6R2 50-59 years, male 33.1
GTEX-X261-0011-R6B-SM-4E3J8 50-59 years, male 31.4
GTEX-1HFI6-0011-R6b-SM-CM2SR 40-49 years, male 30.0
GTEX-1RLM8-0011-R6a-SM-EYYXS 50-59 years, male 27.0
GTEX-131XW-0011-R6b-SM-5K7XY 50-59 years, female 25.4
GTEX-1H23P-0011-R6b-SM-A9G1H 60-69 years, male 25.4
GTEX-1F75B-0011-R6a-SM-ARZMI 50-59 years, male 24.7
GTEX-1EN7A-0011-R6b-SM-9QEHW 40-49 years, male 22.3
GTEX-1CB4H-0011-R6b-SM-CKZNK 60-69 years, female 7.8
GTEX-1A8G6-0011-R6b-SM-7P8PE 60-69 years, male 6.7
GTEX-1C64N-0011-R6a-SM-7IGO9 50-59 years, male 1.1
GTEX-147GR-0011-R6b-SM-5S2RO 60-69 years, male 0.6
GTEX-12584-0011-R6a-SM-5NQ7C 40-49 years, male 0.4
GTEX-S7PM-0011-R6A-SM-3NM8F 60-69 years, male 0.0
GTEX-X4XY-0011-R6B-SM-46MVB 60-69 years, male 0.0
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Brain - Putamen (basal ganglia)
Average nTPM: 144.0
Samples: 205

Max nTPM: 411.7
Min nTPM: 0.4
Std nTPM: 78.7
Median nTPM: 140.4
GTEX-S7SE-0011-R7A-SM-2XCDI 50-59 years, male 411.7
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 365.5
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 357.3
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 351.5
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 304.1
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 299.0
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 298.4
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 290.5
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 288.0
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 286.2
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 285.5
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 268.1
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 265.8
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 265.3
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 262.0
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 255.9
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 254.5
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 254.1
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 253.2
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 250.5
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 248.0
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 247.1
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 246.5
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 240.8
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 239.2
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 235.8
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 234.9
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 232.5
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 230.6
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 230.5
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 229.7
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 228.4
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 227.7
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 225.6
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 225.1
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 223.7
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 223.6
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 223.5
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 221.8
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 220.4
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 219.6
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 217.3
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 213.8
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 210.7
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 209.6
GTEX-TSE9-0011-R7A-SM-3DB7P 60-69 years, female 206.9
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 199.9
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 199.7
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 197.9
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 197.7
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 196.4
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 193.5
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 193.2
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 189.4
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 188.5
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 187.5
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 187.4
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 186.1
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 184.2
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 184.2
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 181.1
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 179.1
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 177.3
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 177.1
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 176.0
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 175.9
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 175.3
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 174.5
GTEX-R55E-0011-R7A-SM-2TC5Z 20-29 years, male 174.3
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 172.7
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 170.6
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 169.0
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 168.9
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 167.5
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 166.4
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 166.2
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 165.9
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 164.9
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 164.3
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 164.1
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 163.6
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 160.8
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 159.7
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 158.6
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 158.3
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 155.9
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 155.1
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 154.4
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 154.3
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 153.2
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 153.2
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 152.2
GTEX-1IOXB-0011-R7b-SM-CE6SM 50-59 years, male 151.5
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 151.3
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 150.4
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 146.9
GTEX-P44G-0011-R7A-SM-2I3F9 30-39 years, male 146.4
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 145.8
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 145.4
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 144.7
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 143.5
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 140.7
GTEX-1J1OQ-0011-R7b-SM-ARU87 40-49 years, female 140.4
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 139.9
GTEX-QVJO-0011-R7A-SM-2S1QO 60-69 years, female 138.6
GTEX-RU72-0011-R7A-SM-2TF5U 50-59 years, female 137.5
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 133.9
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 132.5
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 132.2
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 129.0
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 128.3
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 127.9
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 126.8
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 124.5
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 124.2
GTEX-N7MS-0011-R7a-SM-2HMKN 60-69 years, male 122.8
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 121.4
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 120.6
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 118.6
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 117.3
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 116.9
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 114.8
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 114.5
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 114.5
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 113.4
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 112.8
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 112.8
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 111.5
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 111.1
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 107.6
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 107.4
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 106.5
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 104.7
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 102.9
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 99.1
GTEX-NPJ8-0011-R7a-SM-2HMJV 40-49 years, male 98.7
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 95.6
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 94.9
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 93.9
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 92.3
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 91.6
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 91.2
GTEX-NL3H-0011-R7a-SM-2I3G5 60-69 years, male 90.9
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 90.5
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 90.1
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 90.0
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 89.4
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 88.3
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 87.5
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 87.1
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 84.1
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 83.7
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 83.3
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 82.7
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 82.3
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 81.5
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 80.7
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 80.2
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 79.6
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 77.6
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 74.5
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 74.1
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 73.9
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 73.0
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 71.4
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 71.4
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 71.2
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 69.1
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 68.6
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 67.7
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 66.6
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 66.3
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 66.0
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 65.9
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 65.6
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 65.2
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 65.0
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 64.2
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 61.1
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 60.8
GTEX-18464-0011-R7b-SM-731CM 50-59 years, male 60.0
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 59.3
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 59.2
GTEX-OHPN-0011-R7A-SM-2I5FI 60-69 years, female 57.0
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 55.3
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 50.2
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 46.1
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 44.6
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 42.8
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 41.6
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 37.3
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 33.5
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 31.3
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 28.3
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 24.3
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 22.7
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 22.2
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 17.4
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 11.8
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 3.5
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 2.0
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 0.7
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 0.6
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 0.4
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 0.4
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BASAL GANGLIA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

842.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 653.2
FF:10164-103B2 76 years, female 653.2
Nucleus accumbens
Scaled Tags Per Million: 448.2
FF:10037-101F1 23-56 years, mixed 448.2
Putamen
Scaled Tags Per Million: 842.7
FF:10176-103C5 60 years, female 842.7
Globus pallidus
Scaled Tags Per Million: 272.2
FF:10175-103C4 60 years, female 332.7
FF:10161-103A8 76 years, female 211.7

BASAL GANGLIA - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

386.0
Pig sample Sample description nTPM
Caudate
nTPM: 386.0
Samples: 4

Max nTPM: 479.1
Min nTPM: 301.1
Sample A Female 301.1
Sample B Female 450.9
Sample C Male 479.1
Sample D Male 312.8
Putamen
nTPM: 351.5
Samples: 4

Max nTPM: 461.4
Min nTPM: 184.2
Sample A Female 184.2
Sample B Female 355.3
Sample C Male 461.4
Sample D Male 405.2
Septum
nTPM: 252.1
Samples: 4

Max nTPM: 294.5
Min nTPM: 147.9
Sample A Female 278.0
Sample B Female 294.5
Sample C Male 147.9
Sample D Male 288.0
Ventral pallidum
nTPM: 280.9
Samples: 4

Max nTPM: 341.5
Min nTPM: 183.9
Sample A Female 317.5
Sample B Female 341.5
Sample C Male 183.9
Sample D Male 280.5

BASAL GANGLIA - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

164.2
Mouse sample Sample description nTPM
Caudate putamen
nTPM: 164.2
Samples: 4

Max nTPM: 190.9
Min nTPM: 145.0
Sample A Male 163.1
Sample B Male 190.9
Sample C Female 145.0
Sample D Female 157.6
Septum
nTPM: 129.0
Samples: 4

Max nTPM: 147.9
Min nTPM: 99.5
Sample A Male 134.7
Sample B Male 147.9
Sample C Female 133.8
Sample D Female 99.5
Ventral forebrain
nTPM: 139.7
Samples: 4

Max nTPM: 160.1
Min nTPM: 126.1
Sample A Male 145.7
Sample B Male 126.1
Sample C Female 160.1
Sample D Female 126.8

BASAL GANGLIA - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

8.7
Allen experiment id Experiment description Expression energy
Striatum
Expression energy: 8.7
68798711 Antisense, RP_050217_01_B02, Mouse strain C57BL/6J (56 days, male) 8.7
Pallidum
Expression energy: 6.4
68798711 Antisense, RP_050217_01_B02, Mouse strain C57BL/6J (56 days, male) 6.4

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