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S100A1
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  • S100A1
BRAIN BASAL GANGLIA Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS MEDULLA OBLONGATA
MIDBRAIN OLFACTORY BULB PITUITARY GLAND PONS RETINA SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
AND
VALIDATION
Brain proteome
Basal ganglia
BASAL GANGLIA - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glial cells: Medium
Neuronal cells: Medium
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:905.0 nTPM
HPA Brain:584.3 nTPM
GTEx:905.0 nTPM
FANTOM5:613.9 Scaled Tags Per Million
Pig:3026.9 nTPM
Mouse:243.0 nTPM
Allen mouse:0.5 Expression energy

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA006462Antibody CAB002599
Glial cells HighLow
Neuronal cells -Medium





BASAL GANGLIA - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

584.3
Sample id Sample description nTPM
Caudate nucleus
nTPM: 397.0
2481 Female, age 94, left hemisphere 593.6
2290 Female, age 72, unknown 450.1
2289 Male, age 61, right hemisphere 430.8
2288 Male, age 75, left hemisphere 417.9
1857 Female, age 85, left hemisphere 382.9
2846 Female, age 79, unknown 325.6
1854 Male, age 80, left hemisphere 320.6
1781 Male, age 74, unknown 254.9
Globus pallidus, externus
nTPM: 584.3
2646 Male, age 61, right hemisphere 921.3
1996 Male, age 80, right hemisphere 655.2
2772 Female, age 79, unknown 575.9
2395 Male, age 75, both hemispheres 406.7
2567 Female, age 72, unknown 362.4
Globus pallidus, internus
nTPM: 517.3
2037 Male, age 80, right hemisphere 648.5
2287 Male, age 75, right hemisphere 612.5
2483 Female, age 94, right hemisphere 543.7
1818 Male, age 74, unknown 528.2
2778 Female, age 91, both hemispheres 462.6
2566 Female, age 72, unknown 424.8
2111 Female, age 85, right hemisphere 400.6
Nucleus accumbens
nTPM: 294.6
2286 Male, age 75, left hemisphere 382.4
2698 Female, age 72, unknown 364.9
2824 Male, age 61, right hemisphere 336.0
1806 Female, age 85, left hemisphere 329.9
2391 Female, age 94, left hemisphere 318.8
1783 Male, age 74, unknown 237.7
2732 Male, age 80, right hemisphere 205.6
1856 Female, age 91, right hemisphere 181.8
Nucleus basalis of Meynert
nTPM: 479.8
2569 Male, age 61, both hemispheres 1069.8
2484 Female, age 94, left hemisphere 332.5
2393 Male, age 80, right hemisphere 281.5
2821 Male, age 75, both hemispheres 235.4
Nucleus of the diagonal band
nTPM: 215.4
2029 Male, age 61, right hemisphere 292.5
1812 Female, age 91, both hemispheres 242.4
2775 Male, age 80, right hemisphere 206.8
2195 Female, age 85, both hemispheres 195.8
1979 Male, age 74, unknown 139.4
Putamen
nTPM: 297.7
2482 Female, age 94, left hemisphere 428.6
2489 Female, age 72, unknown 343.1
1829 Male, age 74, unknown 287.9
1838 Male, age 80, right hemisphere 270.1
2466 Female, age 79, unknown 267.8
2647 Male, age 75, left hemisphere 266.2
1937 Female, age 91, right hemisphere 220.6
Septal nuclei
nTPM: 210.7
2059 Female, age 85, both hemispheres 276.6
2629 Female, age 94, right hemisphere 220.2
2394 Male, age 61, left hemisphere 217.6
2031 Female, age 72, unknown 205.4
1960 Male, age 74, unknown 200.7
2199 Male, age 80, right hemisphere 200.6
2009 Female, age 91, both hemispheres 154.1
Stria terminalis, bed nucleus
nTPM: 186.8
2201 Male, age 74, unknown 236.7
2486 Female, age 94, both hemispheres 163.8
1974 Female, age 91, both hemispheres 159.8

BASAL GANGLIA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

905.0
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 766.6
Samples: 246

Max nTPM: 2305.8
Min nTPM: 49.4
Std nTPM: 376.4
Median nTPM: 691.4
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 2305.8
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 2201.9
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 1827.9
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 1777.8
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 1766.5
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 1722.5
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 1629.0
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 1614.5
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 1602.3
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 1572.8
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 1468.0
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 1467.7
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 1463.4
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 1453.3
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 1433.6
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 1399.9
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 1395.9
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 1395.0
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 1374.9
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 1374.6
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 1354.9
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 1354.1
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 1322.7
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 1316.4
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 1303.7
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 1297.3
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 1293.1
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 1287.3
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 1256.5
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 1251.4
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 1248.7
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 1227.9
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 1197.0
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 1190.7
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 1152.4
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 1151.5
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 1135.1
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 1127.9
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 1126.5
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 1124.0
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 1110.7
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 1098.4
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 1097.3
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 1096.4
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 1089.9
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 1084.3
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 1083.0
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 1072.7
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 1065.0
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 1063.7
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 1048.3
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 1047.2
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 1044.7
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 1028.7
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 1010.7
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 1005.3
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 1001.4
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 991.0
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 989.9
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 986.7
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 983.6
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 974.4
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 960.8
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 959.3
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 949.5
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 938.6
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 937.0
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 930.1
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 929.8
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 926.0
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 923.3
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 921.1
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 920.6
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 918.7
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 901.4
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 896.8
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 888.6
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 887.8
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 885.8
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 878.9
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 877.7
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 877.6
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 871.8
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 871.7
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 864.0
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 847.9
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 827.4
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 824.0
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 817.8
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 813.8
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 813.5
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 808.1
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 807.7
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 798.5
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 792.2
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 791.5
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 786.9
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 779.6
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 776.9
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 773.4
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 770.4
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 764.6
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 761.4
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 750.9
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 749.7
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 749.6
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 746.3
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 739.4
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 735.2
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 732.2
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 725.6
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 722.4
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 721.8
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 720.7
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 719.2
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 715.0
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 710.0
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 706.4
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 706.4
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 699.7
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 699.4
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 698.1
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 693.3
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 689.4
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 684.9
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 682.5
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 679.8
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 679.3
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 678.3
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 675.9
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 670.4
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 667.4
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 666.0
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 655.8
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 652.0
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 643.2
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 642.3
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 640.3
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 635.6
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 634.5
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 630.3
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 621.2
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 616.6
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 610.7
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 609.9
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 609.8
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 609.5
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 601.5
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 597.7
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 587.9
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 582.5
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 580.6
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 577.5
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 576.7
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 574.9
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 572.4
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 567.0
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 561.6
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 555.6
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 554.0
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 553.7
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 551.4
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 544.2
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 544.1
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 543.9
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 542.0
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 537.8
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 537.4
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 537.1
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 533.2
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 532.0
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 530.7
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 530.7
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 526.2
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 520.9
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 520.1
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 516.9
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 516.3
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 515.1
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 514.3
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 512.0
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 507.9
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 506.7
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 506.6
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 498.9
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 497.2
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 497.1
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 492.8
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 490.8
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 487.9
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 485.2
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 484.6
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 483.5
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 482.3
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 479.1
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 475.3
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 467.5
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 464.1
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 460.5
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 460.4
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 457.4
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 435.8
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 434.2
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 428.9
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 428.3
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 428.2
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 425.0
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 422.1
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 414.0
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 407.9
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 402.3
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 402.1
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 399.1
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 398.5
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 393.7
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 389.3
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 388.9
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 384.7
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 382.1
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 373.4
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 370.8
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 366.9
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 363.9
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 361.8
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 356.7
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 343.1
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 340.1
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 332.7
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 332.3
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 331.2
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 329.4
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 327.7
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 323.1
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 305.1
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 285.3
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 283.1
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 282.9
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 268.1
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 266.9
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 254.4
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 214.2
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 174.1
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 147.8
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 131.8
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 116.3
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 49.4
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Brain - Nucleus accumbens (basal ganglia)
Average nTPM: 594.1
Samples: 246

Max nTPM: 3714.9
Min nTPM: 29.1
Std nTPM: 371.7
Median nTPM: 512.3
GTEX-14753-0011-R6b-SM-5S2UD 60-69 years, male 3714.9
GTEX-13JVG-0011-R6a-SM-5MR3E 60-69 years, male 1665.0
GTEX-ZV68-0011-R6a-SM-51MSR 50-59 years, female 1596.0
GTEX-1IGQW-0011-R6a-SM-CM2TC 60-69 years, male 1548.5
GTEX-147F4-0011-R6b-SM-5S2UP 50-59 years, male 1510.9
GTEX-1A8G6-0011-R6b-SM-7P8PE 60-69 years, male 1506.4
GTEX-139TS-0011-R6a-SM-5J2OB 60-69 years, male 1500.6
GTEX-16Z82-0011-R6a-SM-7IGLV 60-69 years, male 1430.8
GTEX-145MI-0011-R6a-SM-5PNZA 60-69 years, female 1389.8
GTEX-1LB8K-0011-R6a-SM-EXURT 50-59 years, male 1364.3
GTEX-1EH9U-0011-R6a-SM-CJI2C 60-69 years, male 1308.6
GTEX-11TTK-0011-R6b-SM-DNZZW 60-69 years, female 1289.0
GTEX-1R46S-0011-R6a-SM-EZ6N6 60-69 years, female 1284.9
GTEX-131XW-0011-R6b-SM-5K7XY 50-59 years, female 1218.5
GTEX-1IKOH-0011-R6b-SM-A9G1W 60-69 years, female 1206.4
GTEX-ZVT3-0011-R6a-SM-51MSU 60-69 years, female 1199.1
GTEX-12ZZW-0011-R6a-SM-5DUVZ 50-59 years, male 1182.5
GTEX-1E2YA-0011-R6b-SM-CE6R2 50-59 years, male 1151.3
GTEX-1C64N-0011-R6a-SM-7IGO9 50-59 years, male 1144.3
GTEX-13PL6-0011-R6a-SM-5O9C5 40-49 years, female 1102.3
GTEX-11DYG-0011-R6a-SM-DO936 60-69 years, male 1101.1
GTEX-1H4P4-0011-R6a-SM-ARZLR 50-59 years, male 1099.7
GTEX-1CB4H-0011-R6b-SM-CKZNK 60-69 years, female 1097.4
GTEX-1JJEA-0011-R6a-SM-EXUS1 60-69 years, male 1096.8
GTEX-1EN7A-0011-R6b-SM-9QEHW 40-49 years, male 1074.9
GTEX-1H23P-0011-R6b-SM-A9G1H 60-69 years, male 1063.6
GTEX-S7PM-0011-R6A-SM-3NM8F 60-69 years, male 1028.6
GTEX-1445S-0011-R6b-SM-5PNUF 60-69 years, male 1026.2
GTEX-1GN2E-0011-R6b-SM-9QEII 60-69 years, male 1026.0
GTEX-1F75B-0011-R6a-SM-ARZMI 50-59 years, male 976.7
GTEX-1LVA9-0011-R6a-SM-EYYWH 50-59 years, male 969.2
GTEX-13IVO-0011-R6b-SM-5K7X9 70-79 years, male 956.4
GTEX-1H3O1-0011-R6b-SM-CL54U 60-69 years, male 942.7
GTEX-11GSP-0011-R6b-SM-57WBQ 60-69 years, female 929.1
GTEX-1E1VI-0011-R6a-SM-9OSVJ 50-59 years, male 897.6
GTEX-14PHW-0011-R6b-SM-5YYAR 60-69 years, female 892.3
GTEX-144GO-0011-R6b-SM-5S2V7 60-69 years, male 888.7
GTEX-1LVAO-0011-R6b-SM-EZ6MX 60-69 years, male 869.8
GTEX-ZE9C-0011-R6a-SM-4WWCW 60-69 years, male 869.6
GTEX-17JCI-0011-R6a-SM-72D6D 60-69 years, female 857.7
GTEX-1HUB1-0011-R6b-SM-ARU6W 60-69 years, male 837.0
GTEX-1I19N-0011-R6b-SM-CY8GC 70-79 years, male 832.9
GTEX-X4EP-0011-R6A-SM-3P629 60-69 years, female 826.0
GTEX-1I1HK-0011-R6b-SM-CM2T9 60-69 years, male 816.6
GTEX-X4XY-0011-R6B-SM-46MVB 60-69 years, male 813.5
GTEX-1EWIQ-0011-R6a-SM-ARU8G 70-79 years, female 811.9
GTEX-12584-0011-R6a-SM-5NQ7C 40-49 years, male 800.7
GTEX-13OW8-0011-R6b-SM-5L3I3 60-69 years, male 789.6
GTEX-11O72-0011-R6a-SM-DNZZQ 40-49 years, male 780.1
GTEX-1EKGG-0011-R6a-SM-CL538 60-69 years, male 779.5
GTEX-QVUS-0011-R6A-SM-3GACX 60-69 years, female 777.1
GTEX-11NV4-0011-R6a-SM-57WD5 60-69 years, male 771.1
GTEX-18A6Q-0011-R6a-SM-7LG6R 60-69 years, male 770.7
GTEX-12WSF-0011-R6b-SM-5HL8W 70-79 years, male 768.0
GTEX-1N2DW-0011-R6a-SM-EZ6MW 50-59 years, male 752.2
GTEX-145LU-0011-R6a-SM-5S2V6 50-59 years, male 751.0
GTEX-11ONC-0011-R6a-SM-DO12A 60-69 years, male 745.0
GTEX-X261-0011-R6B-SM-4E3J8 50-59 years, male 743.6
GTEX-1I1GR-0011-R6a-SM-CMKHI 60-69 years, male 741.6
GTEX-12WSH-0011-R6b-SM-5P9F4 50-59 years, male 741.4
GTEX-ZE7O-0011-R6a-SM-57WCI 50-59 years, female 736.0
GTEX-1CB4J-0011-R6b-SM-9WG7B 60-69 years, male 716.7
GTEX-11WQC-0011-R6a-SM-5BC77 60-69 years, male 715.0
GTEX-1BAJH-0011-R6b-SM-7MXT2 70-79 years, male 707.6
GTEX-1IL2U-0011-R6a-SM-ARZLG 60-69 years, male 698.5
GTEX-13N1W-0011-R6a-SM-5MR43 70-79 years, male 691.5
GTEX-14E7W-0011-R6b-SM-5ZZV3 70-79 years, male 687.9
GTEX-13OW5-0011-R6b-SM-5O9BW 60-69 years, male 686.5
GTEX-1MJK2-0011-R6a-SM-EXUS3 50-59 years, male 683.1
GTEX-1I1GQ-0011-R6b-SM-CE6SE 50-59 years, male 681.3
GTEX-1F88E-0011-R6a-SM-CKZNW 60-69 years, female 672.4
GTEX-1J8Q2-0011-R6a-SM-CKZPG 60-69 years, male 669.2
GTEX-RU72-0011-R6A-SM-2TF71 50-59 years, female 666.9
GTEX-ZXG5-0011-R6a-SM-57WBZ 60-69 years, male 662.6
GTEX-1EX96-0011-R6a-SM-9OSVV 50-59 years, male 656.2
GTEX-13FHP-0011-R6b-SM-5LZY6 50-59 years, male 655.2
GTEX-13G51-0011-R6b-SM-5LZX4 60-69 years, male 647.8
GTEX-11DXW-0011-R6a-SM-DO11N 40-49 years, male 647.5
GTEX-139TT-0011-R6b-SM-5J2ON 60-69 years, male 646.3
GTEX-1HGF4-0011-R6a-SM-A96S1 60-69 years, male 641.9
GTEX-1HBPI-0011-R6b-SM-A9G1T 50-59 years, male 638.1
GTEX-1MA7X-0011-R6a-SM-EYYWR 60-69 years, male 632.1
GTEX-13FLV-0011-R6a-SM-5KLZ4 50-59 years, male 629.6
GTEX-13O3O-0011-R6b-SM-5P9GY 60-69 years, female 628.2
GTEX-12WSM-0011-R6b-SM-5EQ6N 60-69 years, male 625.9
GTEX-1AX9I-0011-R6a-SM-7P8PK 60-69 years, male 624.8
GTEX-1GF9V-0011-R6b-SM-CJI2Q 60-69 years, male 622.4
GTEX-11NUK-0011-R6a-SM-DO93O 50-59 years, male 621.0
GTEX-12ZZY-0011-R6b-SM-5EGLA 60-69 years, male 619.8
GTEX-ZDXO-0011-R6a-SM-4WWCT 60-69 years, male 616.5
GTEX-13QJC-0011-R6a-SM-5S2VI 60-69 years, female 615.0
GTEX-1IDJH-0011-R6a-SM-A9SLZ 70-79 years, male 613.8
GTEX-12ZZZ-0011-R6b-SM-5EQ5B 60-69 years, male 608.5
GTEX-11PRG-0011-R6b-SM-DO923 50-59 years, male 607.6
GTEX-13O3Q-0011-R6a-SM-5KM2V 50-59 years, male 602.3
GTEX-ZUA1-0011-R6b-SM-4YCDD 40-49 years, male 598.3
GTEX-13PDP-0011-R6b-SM-5O9D5 60-69 years, male 597.5
GTEX-1GTWX-0011-R6a-SM-A96RN 60-69 years, male 591.0
GTEX-18465-0011-R6a-SM-7LG6M 50-59 years, male 586.1
GTEX-14C5O-0011-R6a-SM-5YYB6 60-69 years, male 578.8
GTEX-147GR-0011-R6b-SM-5S2RO 60-69 years, male 577.1
GTEX-YFC4-0011-R6b-SM-4V6E1 40-49 years, female 573.0
GTEX-11OF3-0011-R6b-SM-57WBG 60-69 years, male 571.6
GTEX-1GMRU-0011-R6b-SM-A9G3B 50-59 years, male 569.2
GTEX-1GF9W-0011-R6b-SM-9QEIE 60-69 years, male 563.9
GTEX-1B8SF-0011-R6b-SM-7MXUD 60-69 years, male 561.7
GTEX-1GN1U-0011-R6a-SM-CKZNO 50-59 years, female 558.9
GTEX-1H3NZ-0011-R6b-SM-A9G1N 60-69 years, male 554.4
GTEX-Y8DK-0011-R6A-SM-4V6EG 60-69 years, male 554.1
GTEX-1C6VR-0011-R6a-SM-7MXU8 60-69 years, male 551.4
GTEX-1IKK5-0011-R6b-SM-A9SLY 60-69 years, male 542.6
GTEX-WVLH-0011-R6A-SM-3MJFZ 50-59 years, male 542.0
GTEX-1CB4G-0011-R6b-SM-9QEGO 60-69 years, male 539.6
GTEX-11DZ1-0011-R6b-SM-DNZZG 50-59 years, male 538.2
GTEX-1GZ4I-0011-R6b-SM-9WG77 50-59 years, male 537.8
GTEX-WZTO-0011-R6B-SM-4E3J6 40-49 years, male 534.0
GTEX-1IY9M-0011-R6a-SM-D4P28 60-69 years, male 531.3
GTEX-13SLX-0011-R6a-SM-5PNX4 50-59 years, female 531.2
GTEX-1HFI6-0011-R6b-SM-CM2SR 40-49 years, male 530.9
GTEX-13N2G-0011-R6b-SM-5MR3P 60-69 years, male 521.4
GTEX-13112-0011-R6b-SM-5DUVK 50-59 years, male 519.2
GTEX-13NYB-0011-R6b-SM-5MR51 40-49 years, male 518.6
GTEX-13OVH-0011-R6b-SM-5LUAX 70-79 years, male 513.8
GTEX-1HBPH-0011-R6a-SM-CKZOV 40-49 years, female 510.8
GTEX-12ZZX-0011-R6a-SM-5HL8L 40-49 years, female 510.5
GTEX-1F75A-0011-R6b-SM-9QEHD 50-59 years, male 509.9
GTEX-ZAB4-0011-R6a-SM-4SOKD 40-49 years, male 508.6
GTEX-145MH-0011-R6a-SM-5PNZ7 50-59 years, male 504.0
GTEX-15DYW-0011-R6b-SM-6PALA 60-69 years, female 502.2
GTEX-11DXY-0011-R6a-SM-DNZZF 60-69 years, male 502.1
GTEX-N7MT-0011-R6a-SM-2I3G3 60-69 years, female 496.8
GTEX-12WSE-0011-R6b-SM-5LZV5 20-29 years, male 495.0
GTEX-1A3MX-0011-R6a-SM-7P8S9 60-69 years, male 489.1
GTEX-1C6WA-0011-R6a-SM-7PBYP 60-69 years, male 484.8
GTEX-WHSE-0011-R6A-SM-3P5ZP 20-29 years, male 483.4
GTEX-1I1GV-0011-R6b-SM-ARU6Q 60-69 years, male 478.6
GTEX-1F48J-0011-R6a-SM-CJI2F 50-59 years, female 472.6
GTEX-1HR9M-0011-R6a-SM-ARU6Z 60-69 years, male 465.2
GTEX-15G19-0011-R6b-SM-7KUM3 60-69 years, male 464.6
GTEX-13FXS-0011-R6b-SM-5L3F7 50-59 years, male 464.5
GTEX-S7SE-0011-R6A-SM-2XCD9 50-59 years, male 461.6
GTEX-1F7RK-0011-R6b-SM-ARZMG 20-29 years, female 459.6
GTEX-1RLM8-0011-R6a-SM-EYYXS 50-59 years, male 458.1
GTEX-14BIM-0011-R6b-SM-5S2VB 60-69 years, female 456.7
GTEX-17HG3-0011-R6b-SM-79OK8 30-39 years, female 453.6
GTEX-1EMGI-0011-R6a-SM-9OSVR 60-69 years, male 451.4
GTEX-14ABY-0011-R6a-SM-5PNWR 50-59 years, male 448.2
GTEX-13OVL-0011-R6a-SM-5L3G4 50-59 years, male 447.2
GTEX-17HHY-0011-R6b-SM-7189Z 50-59 years, male 447.0
GTEX-1F6I4-0011-R6a-SM-CE6R4 60-69 years, male 446.5
GTEX-14JG1-0011-R6b-SM-5YYAU 40-49 years, male 446.3
GTEX-1GZ2Q-0011-R6a-SM-9OSWM 40-49 years, male 444.8
GTEX-T6MN-0011-R6A-SM-32QP8 50-59 years, male 444.3
GTEX-14ASI-0011-R6a-SM-5S2UZ 60-69 years, male 443.2
GTEX-13RTJ-0011-R6a-SM-5SI74 60-69 years, male 441.5
GTEX-14LZ3-0011-R6a-SM-D3L8C 60-69 years, female 439.0
GTEX-13JUV-0011-R6b-SM-5LZYG 40-49 years, female 435.1
GTEX-T2IS-0011-R6A-SM-32QP2 20-29 years, female 434.8
GTEX-1HT8W-0011-R6a-SM-CM2SY 30-39 years, male 429.6
GTEX-TSE9-0011-R6A-SM-3DB7L 60-69 years, female 428.1
GTEX-R55E-0011-R6A-SM-2TC5T 20-29 years, male 425.2
GTEX-15RJE-0011-R6a-SM-7DHL8 40-49 years, male 424.5
GTEX-13FLW-0011-R6b-SM-5L3EN 50-59 years, male 423.8
GTEX-ZF28-0011-R6a-SM-4WKHI 60-69 years, male 423.6
GTEX-UTHO-0011-R6A-SM-3GIJW 60-69 years, male 422.3
GTEX-1399T-0011-R6b-SM-5K7YL 60-69 years, male 420.9
GTEX-15CHQ-0011-R6b-SM-69LOX 60-69 years, male 415.9
GTEX-17F97-0011-R6a-SM-7EPGS 50-59 years, male 415.8
GTEX-13S7M-0011-R6b-SM-5O9D8 60-69 years, female 414.1
GTEX-13X6J-0011-R6a-SM-5PNUB 50-59 years, male 413.8
GTEX-1H1CY-0011-R6b-SM-CE6RP 60-69 years, female 412.5
GTEX-1H1DG-0011-R6a-SM-A9SK8 70-79 years, male 408.2
GTEX-1I1CD-0011-R6b-SM-CJI3Y 60-69 years, female 403.4
GTEX-17MF6-0011-R6b-SM-7LG6G 40-49 years, male 402.2
GTEX-Q2AG-0011-R6A-SM-2HML7 40-49 years, female 400.3
GTEX-183WM-0011-R6b-SM-72D66 70-79 years, female 399.2
GTEX-1B8L1-0011-R6b-SM-7P8SU 60-69 years, male 398.4
GTEX-NL4W-0011-R6a-SM-2I3GA 50-59 years, male 394.0
GTEX-17EVQ-0011-R6a-SM-7189U 70-79 years, male 391.8
GTEX-T5JC-0011-R6A-SM-D3L87 20-29 years, male 383.7
GTEX-XMD1-0011-R6A-SM-4AT5K 60-69 years, male 383.3
GTEX-1F75W-0011-R6a-SM-9QEI5 60-69 years, male 377.3
GTEX-13OW6-0011-R6b-SM-5L3GR 50-59 years, male 374.8
GTEX-1192X-0011-R6a-SM-DNZZB 50-59 years, male 374.0
GTEX-ZVZQ-0011-R6b-SM-57WAY 60-69 years, female 372.4
GTEX-1F6IF-0011-R6a-SM-9QEIO 60-69 years, male 368.3
GTEX-12WSC-0011-R6b-SM-5LU99 50-59 years, male 366.5
GTEX-WWYW-0011-R6A-SM-3NB3G 50-59 years, female 366.5
GTEX-14BMV-0011-R6b-SM-5YY9I 50-59 years, male 363.8
GTEX-QVJO-0011-R6A-SM-2S1QN 60-69 years, female 362.1
GTEX-13NYS-0011-R6b-SM-5MR3R 60-69 years, male 361.0
GTEX-15DCD-0011-R6b-SM-6M46L 70-79 years, female 359.0
GTEX-N7MS-0011-R6a-SM-2HMJ4 60-69 years, male 350.3
GTEX-131XH-0011-R6a-SM-5KM2G 50-59 years, male 336.8
GTEX-1OJC4-0011-R6a-SM-EXOIM 50-59 years, female 333.8
GTEX-X4XX-0011-R6B-SM-46MWP 60-69 years, male 332.4
GTEX-12WSD-0011-R6b-SM-5P9JU 60-69 years, female 331.4
GTEX-P44G-0011-R6A-SM-2XCD3 30-39 years, male 329.7
GTEX-145LS-0011-R6b-SM-5PNWL 60-69 years, female 327.7
GTEX-1LC47-0011-R6b-SM-EZ6MI 60-69 years, male 323.5
GTEX-13OVJ-0011-R6b-SM-5L3GH 50-59 years, female 318.3
GTEX-16XZZ-0011-R6a-SM-7IGNE 60-69 years, male 315.9
GTEX-14PJM-0011-R6a-SM-6872G 50-59 years, female 315.1
GTEX-1GZHY-0011-R6a-SM-9OSWL 50-59 years, female 309.9
GTEX-1ICLZ-0011-R6b-SM-A9G3A 60-69 years, male 307.2
GTEX-14PQA-0011-R6b-SM-6AJAM 50-59 years, female 307.0
GTEX-14BIN-0011-R6a-SM-5S2RH 50-59 years, female 303.0
GTEX-1LH75-0011-R6a-SM-EXURS 50-59 years, female 298.6
GTEX-14PN4-0011-R6b-SM-69LQU 50-59 years, male 298.0
GTEX-13X6K-0011-R6a-SM-5P9K6 60-69 years, female 297.9
GTEX-14JIY-0011-R6b-SM-68714 60-69 years, male 293.1
GTEX-X585-0011-R6A-SM-46MVJ 50-59 years, male 291.5
GTEX-1H3VE-0011-R6b-SM-A9G1M 40-49 years, male 291.3
GTEX-17EVP-0011-R6b-SM-7LT99 40-49 years, male 286.9
GTEX-18464-0011-R6a-SM-731CA 50-59 years, male 286.8
GTEX-XLM4-0011-R6A-SM-4AT4B 60-69 years, male 286.8
GTEX-13VXU-0011-R6a-SM-5SI71 50-59 years, male 286.7
GTEX-WL46-0011-R6A-SM-3LK6X 50-59 years, male 277.6
GTEX-1JMLX-0011-R6b-SM-EXUT9 50-59 years, male 276.1
GTEX-YJ89-0011-R6a-SM-4V6GN 60-69 years, male 273.2
GTEX-132Q8-0011-R6a-SM-5K7YN 60-69 years, male 267.8
GTEX-15EO6-0011-R6a-SM-7KULK 50-59 years, male 262.3
GTEX-1GN73-0011-R6b-SM-CJI2T 60-69 years, male 258.9
GTEX-Z93S-0011-R6b-SM-4RGNJ 50-59 years, male 254.0
GTEX-1HBPM-0011-R6b-SM-ARU73 60-69 years, female 247.4
GTEX-1HB9E-0011-R6b-SM-A9G1P 50-59 years, male 246.9
GTEX-144GL-0011-R6a-SM-5P9HW 50-59 years, male 246.2
GTEX-1313W-0011-R6a-SM-5K7XO 50-59 years, female 245.8
GTEX-PWO3-0011-R6A-SM-2I5F3 60-69 years, female 236.2
GTEX-1B933-0011-R6b-SM-79OOQ 50-59 years, female 235.7
GTEX-1B996-0011-R6b-SM-793AQ 60-69 years, male 233.0
GTEX-NL3H-0011-R6a-SM-2I3G8 60-69 years, male 227.4
GTEX-OHPN-0011-R6A-SM-2I5FH 60-69 years, female 214.3
GTEX-15ER7-0011-R6a-SM-6M46M 20-29 years, female 209.5
GTEX-16YQH-0011-R6b-SM-7938T 30-39 years, male 194.0
GTEX-1H1ZS-0011-R6b-SM-A9G1F 70-79 years, male 156.1
GTEX-P44H-0011-R6A-SM-2XCF3 40-49 years, male 155.5
GTEX-13SLW-0011-R6a-SM-5O9BH 70-79 years, male 142.3
GTEX-1I1GS-0011-R6b-SM-CMKHE 60-69 years, male 117.5
GTEX-NPJ8-0011-R6a-SM-2HMKB 40-49 years, male 101.4
GTEX-1GMR8-0011-R6b-SM-CE6RC 50-59 years, female 94.5
GTEX-QDT8-0011-R6A-SM-32PKI 30-39 years, female 88.6
GTEX-NPJ7-0011-R6a-SM-2I3G7 60-69 years, female 83.2
GTEX-13FHO-0011-R6b-SM-5LZX1 60-69 years, male 80.2
GTEX-QMR6-0011-R6A-SM-32PKP 50-59 years, male 71.0
GTEX-1J1OQ-0011-R6a-SM-ARU86 40-49 years, female 29.1
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Brain - Putamen (basal ganglia)
Average nTPM: 905.0
Samples: 205

Max nTPM: 3036.8
Min nTPM: 30.6
Std nTPM: 459.2
Median nTPM: 811.7
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 3036.8
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 2363.4
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 2299.2
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 2241.8
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 2190.6
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 2018.3
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 2018.0
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 1957.5
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 1912.3
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 1781.7
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 1724.7
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 1691.9
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 1690.6
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 1646.2
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 1593.6
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 1591.3
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 1587.3
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 1558.5
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 1552.6
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 1472.5
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 1433.6
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 1432.5
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 1426.9
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 1399.3
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 1398.5
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 1392.4
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 1390.5
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 1366.3
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 1357.3
GTEX-RU72-0011-R7A-SM-2TF5U 50-59 years, female 1328.9
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 1315.5
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 1299.0
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 1287.9
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 1279.4
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 1272.9
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 1269.1
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 1257.3
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 1253.9
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 1225.5
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 1225.5
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 1221.4
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 1206.9
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 1203.4
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 1196.1
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 1194.8
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 1186.7
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 1181.1
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 1176.9
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 1162.8
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 1162.0
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 1161.6
GTEX-NL3H-0011-R7a-SM-2I3G5 60-69 years, male 1154.2
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 1146.1
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 1145.5
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 1140.2
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 1135.3
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 1132.4
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 1124.1
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 1115.6
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 1109.8
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 1107.3
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 1072.0
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 1071.1
GTEX-1IOXB-0011-R7b-SM-CE6SM 50-59 years, male 1069.3
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 1068.5
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 1067.6
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 1059.6
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 1055.4
GTEX-N7MS-0011-R7a-SM-2HMKN 60-69 years, male 1044.6
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 1034.7
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 1028.9
GTEX-TSE9-0011-R7A-SM-3DB7P 60-69 years, female 1024.0
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 1023.5
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 1011.7
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 1005.5
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 996.7
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 984.6
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 977.9
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 977.4
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 973.9
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 972.0
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 967.1
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 943.6
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 935.2
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 927.6
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 917.7
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 898.4
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 887.5
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 886.2
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 882.1
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 879.6
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 862.1
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 860.1
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 858.7
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 849.4
GTEX-P44G-0011-R7A-SM-2I3F9 30-39 years, male 842.9
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 840.7
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 838.1
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 827.5
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 816.9
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 812.9
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 811.8
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 811.7
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 802.4
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 800.7
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 788.4
GTEX-18464-0011-R7b-SM-731CM 50-59 years, male 785.2
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 783.2
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 782.3
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 779.5
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 776.1
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 773.6
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 767.5
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 767.2
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 758.6
GTEX-S7SE-0011-R7A-SM-2XCDI 50-59 years, male 754.2
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 749.1
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 748.3
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 741.7
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 732.3
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 721.7
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 718.5
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 715.1
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 712.4
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 711.6
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 705.2
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 696.7
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 691.9
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 689.0
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 686.5
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 685.9
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 683.6
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 677.5
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 673.2
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 669.7
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 667.7
GTEX-R55E-0011-R7A-SM-2TC5Z 20-29 years, male 667.1
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 665.9
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 659.3
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 645.5
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 642.7
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 637.0
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 635.0
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 634.5
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 631.1
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 621.4
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 619.9
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 614.4
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 612.6
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 607.0
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 598.4
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 592.8
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 592.8
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 590.3
GTEX-OHPN-0011-R7A-SM-2I5FI 60-69 years, female 581.6
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 571.4
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 569.3
GTEX-QVJO-0011-R7A-SM-2S1QO 60-69 years, female 566.3
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 565.4
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 560.6
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 557.7
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 555.6
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 554.9
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 534.6
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 533.4
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 524.5
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 523.8
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 522.4
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 521.8
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 518.9
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 518.0
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 517.5
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 512.0
GTEX-NPJ8-0011-R7a-SM-2HMJV 40-49 years, male 506.1
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 476.5
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 475.0
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 474.5
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 470.5
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 460.3
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 460.2
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 451.1
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 444.1
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 438.8
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 433.7
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 430.2
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 411.4
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 409.3
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 408.8
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 403.9
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 389.2
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 325.9
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 320.8
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 301.5
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 300.4
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 289.6
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 286.3
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 283.8
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 279.5
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 262.8
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 254.0
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 214.5
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 208.4
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 203.9
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 65.5
GTEX-1J1OQ-0011-R7b-SM-ARU87 40-49 years, female 30.6
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BASAL GANGLIA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

613.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 446.6
FF:10164-103B2 76 years, female 446.6
Nucleus accumbens
Scaled Tags Per Million: 495.2
FF:10037-101F1 23-56 years, mixed 495.2
Putamen
Scaled Tags Per Million: 502.5
FF:10176-103C5 60 years, female 502.5
Globus pallidus
Scaled Tags Per Million: 613.9
FF:10175-103C4 60 years, female 638.0
FF:10161-103A8 76 years, female 589.8

BASAL GANGLIA - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

3026.9
Pig sample Sample description nTPM
Caudate
nTPM: 1932.5
Samples: 4

Max nTPM: 2325.0
Min nTPM: 1525.3
Sample A Female 1525.3
Sample B Female 2315.4
Sample C Male 2325.0
Sample D Male 1564.4
Putamen
nTPM: 3026.9
Samples: 4

Max nTPM: 3815.8
Min nTPM: 2096.7
Sample A Female 3815.8
Sample B Female 2096.7
Sample C Male 3294.7
Sample D Male 2900.5
Septum
nTPM: 1999.4
Samples: 4

Max nTPM: 2101.4
Min nTPM: 1817.8
Sample A Female 2018.4
Sample B Female 2101.4
Sample C Male 1817.8
Sample D Male 2059.9
Ventral pallidum
nTPM: 2096.0
Samples: 4

Max nTPM: 2651.6
Min nTPM: 1554.2
Sample A Female 1554.2
Sample B Female 2651.6
Sample C Male 2261.1
Sample D Male 1917.1

BASAL GANGLIA - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

243.0
Mouse sample Sample description nTPM
Caudate putamen
nTPM: 243.0
Samples: 4

Max nTPM: 261.0
Min nTPM: 231.3
Sample A Male 241.7
Sample B Male 231.3
Sample C Female 238.1
Sample D Female 261.0
Septum
nTPM: 222.1
Samples: 4

Max nTPM: 249.3
Min nTPM: 181.9
Sample A Male 181.9
Sample B Male 249.3
Sample C Female 237.5
Sample D Female 219.6
Ventral forebrain
nTPM: 234.8
Samples: 4

Max nTPM: 285.8
Min nTPM: 209.0
Sample A Male 224.9
Sample B Male 209.0
Sample C Female 285.8
Sample D Female 219.6

BASAL GANGLIA - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

0.5
Allen experiment id Experiment description Expression energy
Striatum
Expression energy: 0.5
70429411 Antisense, RP_050614_01_F03, Mouse strain C57BL/6J (56 days, male) 0.5
Pallidum
Expression energy: 0.2
70429411 Antisense, RP_050614_01_F03, Mouse strain C57BL/6J (56 days, male) 0.2

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