PONS AND MEDULLA - Expression summary
Protein expressioni No data
RNA expressioni
HPA Brain:610.5 nTPM
FANTOM5:787.8 Scaled Tags Per Million
Pig:4711.5 nTPM
Mouse:340.7 nTPM
Allen mouse:0.6 Expression energy

PONS AND MEDULLA - HPA Brain RNA-seq
Max subtype nTPMi 610.5
Sample id Sample description nTPM
Anterior cochlear nucleus, ventral
nTPM: 497.1
2301 Female, age 85, both hemispheres 895.0
2188 Female, age 91, both hemispheres 413.3
2090 Male, age 80, both hemispheres 407.7
1984 Male, age 76, both hemispheres 272.3
Area postrema
nTPM: 343.1
2799 Male, age 61, both hemispheres 440.4
2054 Male, age 76, both hemispheres 295.2
2306 Male, age 80, both hemispheres 293.7
Dorsal cochlear nucleus
nTPM: 395.3
2187 Female, age 91, both hemispheres 480.0
2802 Male, age 74, right hemisphere 429.3
2058 Male, age 76, both hemispheres 383.7
2370 Male, age 61, both hemispheres 375.3
2378 Male, age 80, both hemispheres 308.3
Dorsal medullary reticular nucleus
nTPM: 353.3
2088 Male, age 76, both hemispheres 384.5
2373 Male, age 61, both hemispheres 349.4
2040 Female, age 85, both hemispheres 326.1
Dorsal motor vagal complex
nTPM: 263.1
2797 Male, age 61, both hemispheres 376.2
2185 Male, age 76, both hemispheres 362.2
2000 Male, age 74, unknown 304.7
2844 Male, age 55, unknown 272.5
2133 Female, age 91, both hemispheres 249.0
2643 Male, age 74, both hemispheres 193.7
2807 Female, age 85, both hemispheres 176.5
2813 Female, age 72, unknown 170.3
Dorsal tegmental nucleus
nTPM: 453.9
2083 Male, age 80, both hemispheres 553.7
2326 Male, age 74, both hemispheres 439.7
1936 Male, age 76, left hemisphere 433.5
2358 Male, age 61, both hemispheres 388.5
Dorsolateral tegmental area
nTPM: 450.0
2751 Female, age 85, both hemispheres 657.4
2654 Male, age 80, both hemispheres 541.7
2337 Male, age 61, both hemispheres 406.5
2141 Male, age 76, both hemispheres 355.7
2360 Male, age 74, both hemispheres 288.7
Gigantocellular reticular nuclei, medullary
nTPM: 386.0
2314 Male, age 61, both hemispheres 669.5
1876 Female, age 85, both hemispheres 425.9
2310 Male, age 80, both hemispheres 347.2
2387 Female, age 91, both hemispheres 326.2
2022 Male, age 76, right hemisphere 325.7
2462 Male, age 74, both hemispheres 221.7
Gigantocellular reticular nuclei, pars
nTPM: 337.5
2084 Female, age 85, both hemispheres 461.9
2336 Male, age 61, both hemispheres 375.5
2330 Male, age 80, both hemispheres 303.5
2706 Male, age 80, both hemispheres 285.4
2168 Male, age 76, both hemispheres 261.0
Inferior olive
nTPM: 471.8
2085 Female, age 85, both hemispheres 556.9
2563 Male, age 74, both hemispheres 516.3
2628 Female, age 91, both hemispheres 509.8
2178 Male, age 61, both hemispheres 407.5
2379 Male, age 80, both hemispheres 368.4
Kolliker-Fuse nucleus
nTPM: 492.2
2315 Male, age 76, right hemisphere 558.2
2793 Female, age 91, left hemisphere 472.0
2163 Male, age 80, both hemispheres 446.5
Lateral lemniscal nuclei
nTPM: 329.2
2746 Female, age 85, left hemisphere 427.8
2320 Female, age 91, left hemisphere 331.7
2169 Male, age 76, both hemispheres 322.6
2453 Male, age 74, right hemisphere 283.5
2036 Male, age 80, both hemispheres 280.4
Lateral medullary reticular nucleus
nTPM: 479.6
2305 Male, age 74, both hemispheres 610.9
2852 Male, age 80, both hemispheres 535.9
2804 Female, age 91, both hemispheres 482.9
2374 Male, age 61, both hemispheres 461.1
2190 Female, age 85, both hemispheres 398.7
2044 Male, age 76, both hemispheres 387.9
Lateral parabrachial nucleus
nTPM: 426.6
2792 Male, age 76, both hemispheres 583.4
2013 Male, age 80, both hemispheres 450.0
2139 Female, age 85, right hemisphere 406.3
2790 Male, age 61, both hemispheres 266.8
Lateral vestibular nucleus
nTPM: 504.4
2311 Male, age 80, both hemispheres 602.2
2184 Male, age 76, both hemispheres 406.6
Locus coeruleus
nTPM: 325.8
2317 Female, age 72, unknown 360.4
2720 Male, age 74, both hemispheres 355.8
2162 Male, age 80, both hemispheres 333.3
2123 Female, age 91, both hemispheres 330.2
2014 Male, age 55, unknown 312.1
1980 Male, age 76, both hemispheres 310.9
2788 Male, age 74, unknown 277.8
Medial olivary nucleus
nTPM: 529.9
1962 Male, age 76, both hemispheres 629.8
1943 Male, age 61, both hemispheres 543.7
2138 Female, age 91, both hemispheres 526.8
2851 Male, age 80, both hemispheres 419.4
Medial parabrachial nucleus
nTPM: 487.6
2170 Female, age 91, both hemispheres 659.0
2463 Female, age 85, right hemisphere 483.2
2854 Male, age 80, both hemispheres 472.0
2786 Male, age 76, both hemispheres 439.3
2156 Male, age 61, both hemispheres 384.5
Medial periolivary nuclei
nTPM: 325.9
2081 Male, age 80, both hemispheres 381.3
2791 Male, age 74, right hemisphere 366.5
2063 Male, age 76, both hemispheres 309.0
2458 Female, age 91, both hemispheres 301.6
2171 Female, age 85, both hemispheres 271.0
Medial vestibular nucleus
nTPM: 468.5
2801 Male, age 74, both hemispheres 668.6
2624 Male, age 61, both hemispheres 534.8
2803 Female, age 91, both hemispheres 466.7
2093 Male, age 80, both hemispheres 464.6
2743 Female, age 85, both hemispheres 363.1
2134 Male, age 76, both hemispheres 313.4
Motor facial nucleus
nTPM: 355.5
2126 Male, age 61, both hemispheres 432.1
2697 Female, age 85, both hemispheres 409.4
2365 Male, age 74, right hemisphere 382.3
2795 Female, age 91, both hemispheres 355.4
2062 Male, age 76, both hemispheres 317.5
2327 Male, age 80, both hemispheres 236.4
Motor hypoglossal nucleus
nTPM: 329.4
2182 Male, age 80, both hemispheres 422.8
2125 Female, age 91, both hemispheres 407.3
2461 Male, age 61, both hemispheres 296.3
2132 Female, age 85, both hemispheres 284.9
2277 Male, age 76, both hemispheres 235.7
Motor trigeminal nucleus
nTPM: 389.8
2309 Male, age 76, both hemispheres 474.9
2335 Male, age 61, both hemispheres 458.6
2321 Female, age 91, both hemispheres 371.6
2560 Male, age 74, both hemispheres 331.1
2079 Male, age 80, both hemispheres 312.8
Nuclei of the trapezoid body
nTPM: 314.3
1983 Male, age 76, both hemispheres 341.9
2166 Male, age 80, both hemispheres 341.6
2159 Male, age 61, both hemispheres 340.6
2368 Female, age 91, both hemispheres 326.1
2735 Female, age 85, both hemispheres 221.0
Nucleus ambiguus
nTPM: 432.4
2071 Male, age 76, both hemispheres 608.4
2096 Female, age 85, both hemispheres 256.4
Nucleus cuneatus
nTPM: 391.6
2808 Female, age 85, both hemispheres 502.2
2564 Male, age 74, both hemispheres 443.0
2100 Male, age 76, both hemispheres 424.3
2381 Male, age 80, both hemispheres 415.0
2380 Male, age 80, both hemispheres 383.3
2805 Female, age 91, both hemispheres 374.3
2376 Male, age 61, both hemispheres 351.4
2131 Male, age 76, both hemispheres 344.5
2562 Male, age 61, both hemispheres 286.2
Nucleus gracilis
nTPM: 351.2
2627 Male, age 74, both hemispheres 414.0
2382 Male, age 80, both hemispheres 350.5
2299 Female, age 85, both hemispheres 289.0
Nucleus raphe magnus
nTPM: 274.7
2051 Male, age 76, both hemispheres 377.2
2455 Male, age 74, both hemispheres 346.6
2328 Male, age 80, both hemispheres 322.2
2459 Female, age 91, both hemispheres 258.6
2160 Male, age 61, both hemispheres 194.8
2172 Female, age 85, both hemispheres 148.6
Nucleus raphe obscurus
nTPM: 610.5
2845 Female, age 85, midline 726.9
2142 Male, age 76, midline 591.2
2800 Male, age 61, midline 513.2
Nucleus raphe pallidus
nTPM: 452.6
2145 Male, age 76, midline 621.8
2183 Male, age 80, midline 370.4
1924 Male, age 61, midline 365.7
Nucleus tractus solitarii
nTPM: 187.2
2656 Male, age 76, both hemispheres 270.7
2144 Female, age 91, right hemisphere 201.1
2191 Female, age 85, both hemispheres 181.3
2307 Male, age 80, both hemispheres 95.5
Paramedian reticular nucleus
nTPM: 375.7
2052 Male, age 76, both hemispheres 416.6
2057 Male, age 80, both hemispheres 377.2
2050 Female, age 85, both hemispheres 368.9
2313 Male, age 61, both hemispheres 340.2
Parvicellular reticular nuclei
nTPM: 423.5
2095 Male, age 76, both hemispheres 520.8
2119 Male, age 80, both hemispheres 495.6
2558 Male, age 74, both hemispheres 254.1
Parvicellular reticular nuclei, medullary
nTPM: 335.1
2189 Female, age 91, both hemispheres 365.1
2181 Male, age 80, left hemisphere 321.9
2091 Female, age 85, both hemispheres 318.3
Pedunculopontine tegmental nucleus
nTPM: 405.5
2334 Male, age 80, both hemispheres 511.8
1921 Female, age 85, both hemispheres 356.0
2338 Male, age 61, both hemispheres 348.7
Peritrigeminal nucleus
nTPM: 480.2
2136 Male, age 76, both hemispheres 551.2
2067 Female, age 85, both hemispheres 506.5
2179 Male, age 61, both hemispheres 382.8
Pontine nuclei
nTPM: 343.6
2319 Female, age 91, both hemispheres 414.5
2115 Male, age 80, left hemisphere 411.2
2109 Female, age 72, unknown 401.3
1863 Male, age 55, unknown 382.1
2454 Male, age 74, left hemisphere 381.1
1968 Male, age 76, left hemisphere 313.1
2787 Female, age 85, both hemispheres 243.9
2727 Male, age 61, right hemisphere 201.8
Pontine raphe nucleus
nTPM: 339.0
2853 Male, age 76, midline 394.2
2122 Female, age 85, midline 283.9
Posteroventral cochlear nucleus
nTPM: 444.2
2341 Male, age 80, both hemispheres 643.3
2135 Female, age 91, both hemispheres 461.4
2371 Male, age 61, both hemispheres 381.4
2070 Male, age 76, both hemispheres 374.7
2752 Female, age 85, both hemispheres 360.3
Prepositus hypoglossal nucleus
nTPM: 410.8
2855 Female, age 85, right hemisphere 598.1
2086 Male, age 80, both hemispheres 223.5
Principal sensory trigeminal nucleus
nTPM: 356.1
2324 Male, age 76, both hemispheres 518.0
2367 Female, age 91, left hemisphere 392.7
2158 Male, age 61, both hemispheres 263.2
2008 Male, age 80, left hemisphere 250.6
Reticular pontine nucleus, caudal
nTPM: 335.1
2559 Male, age 74, both hemispheres 408.4
2092 Male, age 76, both hemispheres 395.3
2457 Female, age 91, both hemispheres 286.7
2332 Male, age 80, right hemisphere 249.9
Reticular pontine nucleus, oral
nTPM: 419.9
1939 Male, age 80, both hemispheres 495.7
2167 Male, age 76, both hemispheres 430.0
2012 Female, age 85, both hemispheres 425.3
2361 Male, age 74, both hemispheres 406.5
2366 Female, age 91, both hemispheres 342.1
Reticulotegmental nucleus
nTPM: 407.8
2322 Female, age 91, both hemispheres 440.2
2333 Male, age 80, both hemispheres 438.3
2325 Male, age 76, both hemispheres 399.8
2452 Male, age 74, both hemispheres 353.1
Spinal trigeminal nucleus, caudal
nTPM: 356.5
2312 Male, age 61, both hemispheres 413.3
2447 Male, age 76, both hemispheres 379.9
2308 Male, age 80, both hemispheres 349.3
2390 Female, age 91, both hemispheres 331.9
2642 Male, age 74, both hemispheres 308.1
Spinal trigeminal nucleus, interpolar
nTPM: 330.2
2625 Male, age 61, both hemispheres 394.3
2033 Male, age 80, both hemispheres 344.5
2389 Female, age 91, both hemispheres 336.5
2066 Male, age 76, right hemisphere 331.8
2386 Female, age 85, both hemispheres 244.2
Spinal trigeminal nucleus, oral
nTPM: 345.9
2164 Male, age 80, both hemispheres 387.0
1978 Male, age 76, both hemispheres 334.2
2737 Female, age 85, both hemispheres 316.5
Spinal vestibular nucleus
nTPM: 427.2
2806 Female, age 85, both hemispheres 514.3
2748 Male, age 76, both hemispheres 477.2
2384 Male, age 74, both hemispheres 426.2
2796 Male, age 61, both hemispheres 418.9
2186 Female, age 91, both hemispheres 368.2
2780 Male, age 80, both hemispheres 358.4
Subcoeruleus area
nTPM: 440.2
2369 Female, age 85, left hemisphere 689.3
1958 Male, age 80, both hemispheres 441.5
2451 Male, age 74, both hemispheres 380.7
2323 Female, age 91, left hemisphere 370.2
2089 Male, age 76, left hemisphere 319.5
Superior olive
nTPM: 345.5
2020 Male, age 76, both hemispheres 392.6
2364 Male, age 74, right hemisphere 376.1
2329 Male, age 80, right hemisphere 371.4
2561 Female, age 91, both hemispheres 317.7
1875 Female, age 85, both hemispheres 269.5
Superior vestibular nucleus
nTPM: 428.4
2061 Male, age 76, both hemispheres 473.1
2015 Male, age 80, both hemispheres 443.0
2383 Male, age 74, both hemispheres 369.2
Ventral medullary reticular nucleus
nTPM: 420.6
2372 Male, age 61, both hemispheres 441.5
2060 Male, age 76, both hemispheres 399.6
Ventral periolivary nuclei
nTPM: 341.7
2023 Male, age 76, both hemispheres 450.1
2165 Male, age 80, both hemispheres 334.8
2130 Female, age 85, both hemispheres 294.7
2794 Female, age 91, left hemisphere 287.3
Ventrolateral medulla, A1-C1 cell groups
nTPM: 386.3
2302 Female, age 91, both hemispheres 446.5
1986 Male, age 76, both hemispheres 434.8
2118 Male, age 80, both hemispheres 378.8
2180 Male, age 61, both hemispheres 351.4
2741 Female, age 85, both hemispheres 319.8
Ventrolateral tegmental area, A5 NE cell group
nTPM: 344.7
2840 Female, age 85, both hemispheres 469.5
1959 Male, age 76, both hemispheres 342.8
2161 Male, age 80, both hemispheres 338.0
2449 Male, age 74, both hemispheres 315.0
2456 Female, age 91, both hemispheres 309.0
2359 Male, age 61, both hemispheres 293.9

PONS AND MEDULLA - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 787.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Locus coeruleus
Scaled Tags Per Million: 787.8
FF:10182-103D2 60 years, female 865.8
FF:10165-103B3 76 years, female 709.9
Medulla oblongata
Scaled Tags Per Million: 569.1
FF:10038-101F2 18-64 years, mixed 807.2
FF:10174-103C3 60 years, female 491.4
FF:10155-103A2 76 years, female 408.7
Pons
Scaled Tags Per Million: 683.8
FF:10033-101E6 18-54 years, mixed 683.8

PONS AND MEDULLA - Pig RNA-seqi
Max subtype nTPMi 4711.5
Pig sample Sample description nTPM
Medulla oblongata
nTPM: 4711.6
Samples: 4

Max nTPM: 5809.7
Min nTPM: 3235.8
Sample A Female 3235.8
Sample B Female 4367.3
Sample C Male 5809.7
Sample D Male 5433.4
Pons
nTPM: 4285.2
Samples: 4

Max nTPM: 5368.8
Min nTPM: 3128.1
Sample A Female 3296.1
Sample B Female 3128.1
Sample C Male 5368.8
Sample D Male 5347.7

PONS AND MEDULLA - Mouse RNA-seqi
Max subtype nTPMi 340.7
Mouse sample Sample description nTPM
Pons and medulla
nTPM: 340.7
Samples: 4

Max nTPM: 363.6
Min nTPM: 314.7
Sample A Male 326.2
Sample B Male 314.7
Sample C Female 358.4
Sample D Female 363.6

PONS AND MEDULLA - Allen Mouse ISHi
Max subtype Expression energyi 0.6
Allen experiment id Experiment description Expression energy
Medulla oblongata
Expression energy: 0.6
70429411 Antisense, RP_050614_01_F03, Mouse strain C57BL/6J (56 days, male) 0.6
Pons
Expression energy: 0.5
70429411 Antisense, RP_050614_01_F03, Mouse strain C57BL/6J (56 days, male) 0.5

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