HIPPOCAMPAL FORMATION - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:245.6 nTPM
HPA Brain:94.8 nTPM
GTEx:245.6 nTPM
FANTOM5:140.0 Scaled Tags Per Million
Pig:455.1 nTPM
Mouse:186.1 nTPM
Allen mouse:14.6 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 94.8
Sample id Sample description nTPM
Hippocampus
nTPM: 71.0
1855 Male, age 76, left hemisphere 99.3
2621 Female, age 67, right hemisphere 83.0
1898 Male, age 80, left hemisphere 81.6
2148 Female, age 91, left hemisphere 62.4
2529 Female, age 94, left hemisphere 53.2
1911 Female, age 85, right hemisphere 46.5
Dentate gyrus
nTPM: 81.3
2530 Female, age 94, left hemisphere 127.4
1927 Female, age 91, both hemispheres 93.7
2010 Male, age 76, both hemispheres 87.3
2531 Female, age 67, both hemispheres 73.0
2246 Female, age 85, both hemispheres 64.9
2528 Male, age 74, both hemispheres 41.2
Entorhinal gyrus
nTPM: 53.6
1938 Female, age 85, left hemisphere 76.9
2613 Female, age 94, left hemisphere 65.1
2764 Male, age 80, right hemisphere 54.7
1787 Male, age 76, left hemisphere 47.1
2117 Female, age 91, right hemisphere 39.4
2686 Male, age 75, right hemisphere 38.7
Hippocampus, CA1
nTPM: 94.8
2749 Male, age 80, left hemisphere 133.9
2045 Male, age 76, both hemispheres 118.3
1873 Female, age 85, both hemispheres 112.7
2527 Male, age 74, both hemispheres 56.0
2082 Female, age 91, right hemisphere 53.3
Hippocampus, CA2
nTPM: 68.6
1963 Male, age 80, left hemisphere 99.3
2437 Female, age 94, left hemisphere 90.0
1892 Male, age 76, both hemispheres 84.9
1940 Female, age 85, left hemisphere 50.9
2113 Female, age 91, right hemisphere 49.7
2249 Male, age 74, both hemispheres 36.8
Hippocampus, CA3
nTPM: 75.4
2137 Male, age 80, left hemisphere 109.4
2861 Female, age 67, both hemispheres 100.5
2620 Female, age 94, left hemisphere 79.3
1867 Male, age 76, both hemispheres 63.6
2436 Male, age 74, both hemispheres 50.0
1891 Female, age 85, both hemispheres 49.8
Parahippocampal cortex
nTPM: 53.8
1850 Male, age 80, both hemispheres 72.1
2245 Female, age 91, both hemispheres 65.5
2532 Female, age 72, left hemisphere 63.5
2622 Female, age 67, right hemisphere 58.2
1990 Female, age 91, right hemisphere 54.7
2018 Male, age 76, both hemispheres 52.5
2693 Female, age 94, both hemispheres 48.4
2692 Male, age 74, both hemispheres 48.0
1933 Female, age 85, both hemispheres 40.9
2250 Female, age 67, right hemisphere 34.5
Perirhinal gyrus
nTPM: 59.6
1847 Female, age 91, left hemisphere 77.6
1841 Female, age 85, right hemisphere 60.3
1794 Male, age 80, right hemisphere 58.2
2521 Female, age 94, right hemisphere 57.2
2848 Male, age 76, right hemisphere 44.9
Subiculum
nTPM: 51.5
2729 Female, age 91, right hemisphere 62.5
2042 Male, age 76, both hemispheres 61.1
2438 Female, age 94, left hemisphere 61.0
1901 Male, age 80, both hemispheres 57.1
1977 Female, age 85, both hemispheres 36.3
2619 Male, age 74, both hemispheres 30.8

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 245.6
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 245.6
Samples: 197

Max nTPM: 632.5
Min nTPM: 57.7
Std nTPM: 117.5
Median nTPM: 227.5
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 632.5
GTEX-13FTY-0011-R1a-SM-5LZXE 40-49 years, female 601.6
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 566.8
GTEX-X4EP-0011-R1A-SM-3P624 60-69 years, female 535.2
GTEX-1EX96-0011-R1a-SM-CE6R5 50-59 years, male 526.3
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 523.5
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 517.6
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 507.0
GTEX-N7MS-0011-R1a-SM-2HMJG 60-69 years, male 496.5
GTEX-139TT-0011-R1a-SM-5LZVD 60-69 years, male 488.1
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 485.2
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 140.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 140.0
FF:10169-103B7 60 years, female 212.9
FF:10153-102I9 76 years, female 67.2

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 455.1
Pig sample Sample description nTPM
Subiculum
nTPM: 337.9
Samples: 4

Max nTPM: 499.6
Min nTPM: 271.2
Sample A Female 499.6
Sample B Female 301.1
Sample C Male 271.2
Sample D Male 279.6
Dorsal hippocampus
nTPM: 455.1
Samples: 4

Max nTPM: 668.4
Min nTPM: 324.4
Sample A Female 668.4
Sample B Female 491.5
Sample C Male 324.4
Sample D Male 336.0
Entorhinal cortex
nTPM: 408.8
Samples: 4

Max nTPM: 488.5
Min nTPM: 346.7
Sample A Female 488.5
Sample B Female 346.7
Sample C Male 417.1
Sample D Male 382.9
Ventral hippocampus
nTPM: 415.8
Samples: 4

Max nTPM: 637.6
Min nTPM: 226.2
Sample A Female 396.5
Sample B Female 226.2
Sample C Male 402.8
Sample D Male 637.6

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 186.1
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 141.3
Samples: 4

Max nTPM: 146.9
Min nTPM: 126.6
Sample A Male 126.6
Sample B Male 144.6
Sample C Female 146.9
Sample D Female 146.9
Hippocampal formation
nTPM: 186.1
Samples: 4

Max nTPM: 225.7
Min nTPM: 165.6
Sample A Male 165.6
Sample B Male 185.8
Sample C Female 225.7
Sample D Female 167.2

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 14.6
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 14.6
77454976 Antisense, RP_070129_01_E08, Mouse strain C57BL/6J (56 days, male) 15.3
79587728 Antisense, RP_071204_02_D10, Mouse strain C57BL/6J (56 days, male) 13.8

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