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  • AP2M1
TISSUE PRIMARY DATA BASAL GANGLIA Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM
ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MIDBRAIN NASOPHARYNX
ORAL MUCOSA OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE
SMOOTH MUSCLE SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
ANTIBODIES
AND
VALIDATION
Dictionary
Tissue proteome
Basal ganglia
BASAL GANGLIA - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:251.6 nTPM
HPA Brain:287.9 nTPM
GTEx:251.6 nTPM
FANTOM5:362.0 Scaled Tags Per Million
Pig:202.3 nTPM
Mouse:739.3 nTPM
Allen mouse:6.3 Expression energy

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA036849
Glial cells Not detected
Neuronal cells High



BASAL GANGLIA - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

287.9
Sample id Sample description nTPM
Caudate nucleus
nTPM: 177.9
1781 Male, age 74, unknown 212.1
2846 Female, age 79, unknown 196.7
1857 Female, age 85, left hemisphere 187.7
2481 Female, age 94, left hemisphere 182.0
2288 Male, age 75, left hemisphere 178.5
2290 Female, age 72, unknown 170.4
1854 Male, age 80, left hemisphere 170.0
2289 Male, age 61, right hemisphere 126.1
Globus pallidus, externus
nTPM: 153.3
2772 Female, age 79, unknown 216.4
2395 Male, age 75, both hemispheres 195.3
1996 Male, age 80, right hemisphere 141.2
2646 Male, age 61, right hemisphere 124.5
2567 Female, age 72, unknown 89.3
Globus pallidus, internus
nTPM: 146.1
2287 Male, age 75, right hemisphere 210.0
2483 Female, age 94, right hemisphere 164.2
1818 Male, age 74, unknown 162.5
2778 Female, age 91, both hemispheres 145.0
2037 Male, age 80, right hemisphere 131.4
2566 Female, age 72, unknown 112.5
2111 Female, age 85, right hemisphere 97.1
Nucleus accumbens
nTPM: 193.6
1856 Female, age 91, right hemisphere 267.1
1783 Male, age 74, unknown 224.1
2286 Male, age 75, left hemisphere 201.4
1806 Female, age 85, left hemisphere 198.5
2698 Female, age 72, unknown 196.2
2824 Male, age 61, right hemisphere 185.1
2391 Female, age 94, left hemisphere 151.3
2732 Male, age 80, right hemisphere 125.2
Nucleus basalis of Meynert
nTPM: 150.7
2821 Male, age 75, both hemispheres 184.2
2484 Female, age 94, left hemisphere 157.2
2393 Male, age 80, right hemisphere 141.3
2569 Male, age 61, both hemispheres 120.1
Nucleus of the diagonal band
nTPM: 287.9
1812 Female, age 91, both hemispheres 354.6
2775 Male, age 80, right hemisphere 352.3
2195 Female, age 85, both hemispheres 291.7
2029 Male, age 61, right hemisphere 270.0
1979 Male, age 74, unknown 170.7
Putamen
nTPM: 171.9
1838 Male, age 80, right hemisphere 202.2
2466 Female, age 79, unknown 199.1
1937 Female, age 91, right hemisphere 196.6
2482 Female, age 94, left hemisphere 173.0
1829 Male, age 74, unknown 170.1
2647 Male, age 75, left hemisphere 157.6
2489 Female, age 72, unknown 104.8
Septal nuclei
nTPM: 236.0
2031 Female, age 72, unknown 340.0
1960 Male, age 74, unknown 334.5
2009 Female, age 91, both hemispheres 258.4
2629 Female, age 94, right hemisphere 240.4
2059 Female, age 85, both hemispheres 180.3
2394 Male, age 61, left hemisphere 156.9
2199 Male, age 80, right hemisphere 141.8
Stria terminalis, bed nucleus
nTPM: 248.6
1974 Female, age 91, both hemispheres 344.6
2486 Female, age 94, both hemispheres 235.8
2201 Male, age 74, unknown 165.3

BASAL GANGLIA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

251.6
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 217.1
Samples: 246

Max nTPM: 456.2
Min nTPM: 108.6
Std nTPM: 58.6
Median nTPM: 212.4
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 456.2
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 410.4
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 382.2
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 362.3
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 350.2
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 339.8
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 332.2
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 330.5
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 329.2
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 327.4
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 323.8
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 323.0
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 318.5
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 318.5
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 316.9
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 314.8
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 314.3
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 313.1
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 311.9
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 307.7
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 306.1
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 305.1
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 302.7
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 300.6
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 298.1
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 294.7
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 293.2
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 291.9
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 290.8
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 288.6
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 288.6
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 288.3
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 285.7
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 283.8
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 281.5
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 280.2
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 279.8
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 277.7
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 276.1
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 273.8
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 271.9
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 270.6
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 269.5
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 268.3
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 266.9
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 266.5
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 265.4
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 265.2
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 265.1
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 265.0
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 263.7
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 262.3
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 260.0
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 258.6
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 257.3
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 257.2
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 257.1
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 257.0
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 256.9
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 256.1
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 255.6
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 255.5
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 255.3
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 254.0
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 253.4
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 253.0
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 252.2
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 251.4
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 250.5
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 249.8
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 249.3
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 249.2
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 247.6
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 247.5
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 243.7
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 243.6
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 243.6
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 243.2
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 243.0
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 242.9
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 241.2
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 240.0
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 239.6
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 239.3
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 238.9
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 238.4
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 238.3
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 236.6
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 235.5
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 235.0
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 232.2
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 232.0
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 231.8
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 230.9
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 229.1
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 229.0
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 228.9
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 227.4
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 225.3
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 224.9
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 224.4
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 224.3
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 223.8
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 223.3
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 223.1
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 223.0
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 222.3
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 222.0
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 221.8
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 220.3
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 218.8
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 218.8
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 218.5
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 217.7
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 216.8
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 216.3
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 215.5
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 214.6
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 213.8
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 213.7
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 213.0
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 212.9
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 212.6
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 212.1
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 212.1
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 211.5
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 210.7
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 209.3
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 207.6
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 207.2
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 206.7
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 206.6
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 206.3
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 205.6
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 205.0
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 204.4
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 203.4
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 202.0
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 201.4
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 199.0
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 197.0
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 196.1
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 195.9
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 195.8
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 195.6
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 195.1
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 193.4
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 188.6
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 187.1
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 186.5
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 186.3
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 186.3
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 186.2
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 186.1
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 185.4
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 185.2
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 184.9
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 184.9
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 184.6
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 184.3
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 183.6
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 183.4
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 182.6
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 181.9
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 181.4
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 181.0
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 180.7
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 180.6
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 180.4
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 180.3
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 180.2
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 179.1
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 178.1
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 177.7
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 176.2
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 175.9
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 174.7
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 174.2
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 173.5
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 173.2
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 172.7
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 172.5
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 172.1
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 171.4
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 170.4
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 168.3
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 168.2
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 167.6
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 167.6
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 167.1
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 166.7
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 165.4
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 164.6
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 164.4
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 163.2
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 163.1
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 162.6
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 162.2
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 162.2
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 161.6
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 161.6
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 161.0
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 160.4
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 160.2
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 159.4
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 158.0
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 157.8
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 157.6
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 156.9
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 156.8
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 155.7
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 153.5
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 153.2
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 151.9
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 151.3
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 151.3
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 150.8
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 150.3
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 150.2
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 150.0
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 148.4
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 148.1
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 147.8
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 147.5
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 146.3
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 145.3
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 144.4
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 142.8
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 142.7
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 141.2
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 140.3
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 139.6
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 139.4
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 139.4
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 138.9
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 136.6
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 136.2
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 135.4
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 134.1
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 133.5
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 132.5
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 131.7
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 130.1
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 117.0
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 115.2
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 108.6
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Brain - Nucleus accumbens (basal ganglia)
Average nTPM: 251.6
Samples: 246

Max nTPM: 441.2
Min nTPM: 101.6
Std nTPM: 73.7
Median nTPM: 262.6
GTEX-1LVAO-0011-R6b-SM-EZ6MX 60-69 years, male 441.2
GTEX-1F75A-0011-R6b-SM-9QEHD 50-59 years, male 430.6
GTEX-18464-0011-R6a-SM-731CA 50-59 years, male 425.3
GTEX-14BIN-0011-R6a-SM-5S2RH 50-59 years, female 411.0
GTEX-1AX9I-0011-R6a-SM-7P8PK 60-69 years, male 386.1
GTEX-N7MS-0011-R6a-SM-2HMJ4 60-69 years, male 380.7
GTEX-1I1CD-0011-R6b-SM-CJI3Y 60-69 years, female 379.3
GTEX-1F75W-0011-R6a-SM-9QEI5 60-69 years, male 377.2
GTEX-1313W-0011-R6a-SM-5K7XO 50-59 years, female 372.3
GTEX-1OJC4-0011-R6a-SM-EXOIM 50-59 years, female 366.1
GTEX-1B8L1-0011-R6b-SM-7P8SU 60-69 years, male 361.0
GTEX-14E7W-0011-R6b-SM-5ZZV3 70-79 years, male 357.8
GTEX-12WSC-0011-R6b-SM-5LU99 50-59 years, male 356.9
GTEX-13FHO-0011-R6b-SM-5LZX1 60-69 years, male 355.5
GTEX-XLM4-0011-R6A-SM-4AT4B 60-69 years, male 354.8
GTEX-14PJM-0011-R6a-SM-6872G 50-59 years, female 354.5
GTEX-13X6J-0011-R6a-SM-5PNUB 50-59 years, male 353.0
GTEX-1ICLZ-0011-R6b-SM-A9G3A 60-69 years, male 352.1
GTEX-1B933-0011-R6b-SM-79OOQ 50-59 years, female 350.6
GTEX-11DXW-0011-R6a-SM-DO11N 40-49 years, male 349.5
GTEX-13VXU-0011-R6a-SM-5SI71 50-59 years, male 346.5
GTEX-1F6IF-0011-R6a-SM-9QEIO 60-69 years, male 346.2
GTEX-1JMLX-0011-R6b-SM-EXUT9 50-59 years, male 341.1
GTEX-NL3H-0011-R6a-SM-2I3G8 60-69 years, male 340.4
GTEX-14BMV-0011-R6b-SM-5YY9I 50-59 years, male 339.8
GTEX-1GN73-0011-R6b-SM-CJI2T 60-69 years, male 338.5
GTEX-NPJ7-0011-R6a-SM-2I3G7 60-69 years, female 338.2
GTEX-1J8Q2-0011-R6a-SM-CKZPG 60-69 years, male 337.5
GTEX-1F7RK-0011-R6b-SM-ARZMG 20-29 years, female 336.5
GTEX-16YQH-0011-R6b-SM-7938T 30-39 years, male 335.3
GTEX-1HR9M-0011-R6a-SM-ARU6Z 60-69 years, male 335.0
GTEX-1IDJH-0011-R6a-SM-A9SLZ 70-79 years, male 332.9
GTEX-11DXY-0011-R6a-SM-DNZZF 60-69 years, male 332.4
GTEX-12WSH-0011-R6b-SM-5P9F4 50-59 years, male 329.4
GTEX-15CHQ-0011-R6b-SM-69LOX 60-69 years, male 329.0
GTEX-18A6Q-0011-R6a-SM-7LG6R 60-69 years, male 328.2
GTEX-13OVL-0011-R6a-SM-5L3G4 50-59 years, male 326.5
GTEX-15ER7-0011-R6a-SM-6M46M 20-29 years, female 325.0
GTEX-1A3MX-0011-R6a-SM-7P8S9 60-69 years, male 324.9
GTEX-13FLV-0011-R6a-SM-5KLZ4 50-59 years, male 324.3
GTEX-17F97-0011-R6a-SM-7EPGS 50-59 years, male 322.1
GTEX-13OW6-0011-R6b-SM-5L3GR 50-59 years, male 321.0
GTEX-13O3Q-0011-R6a-SM-5KM2V 50-59 years, male 320.8
GTEX-1I1GV-0011-R6b-SM-ARU6Q 60-69 years, male 320.0
GTEX-14JIY-0011-R6b-SM-68714 60-69 years, male 319.7
GTEX-13RTJ-0011-R6a-SM-5SI74 60-69 years, male 319.5
GTEX-1GTWX-0011-R6a-SM-A96RN 60-69 years, male 319.5
GTEX-145MH-0011-R6a-SM-5PNZ7 50-59 years, male 318.0
GTEX-1MJK2-0011-R6a-SM-EXUS3 50-59 years, male 318.0
GTEX-13NYS-0011-R6b-SM-5MR3R 60-69 years, male 316.3
GTEX-11OF3-0011-R6b-SM-57WBG 60-69 years, male 314.9
GTEX-1IY9M-0011-R6a-SM-D4P28 60-69 years, male 314.8
GTEX-12WSD-0011-R6b-SM-5P9JU 60-69 years, female 314.7
GTEX-15RJE-0011-R6a-SM-7DHL8 40-49 years, male 314.0
GTEX-14JG1-0011-R6b-SM-5YYAU 40-49 years, male 313.1
GTEX-17EVP-0011-R6b-SM-7LT99 40-49 years, male 313.0
GTEX-1HT8W-0011-R6a-SM-CM2SY 30-39 years, male 312.3
GTEX-Q2AG-0011-R6A-SM-2HML7 40-49 years, female 312.2
GTEX-12WSF-0011-R6b-SM-5HL8W 70-79 years, male 311.2
GTEX-TSE9-0011-R6A-SM-3DB7L 60-69 years, female 311.0
GTEX-1EX96-0011-R6a-SM-9OSVV 50-59 years, male 309.7
GTEX-WZTO-0011-R6B-SM-4E3J6 40-49 years, male 309.3
GTEX-1GZ4I-0011-R6b-SM-9WG77 50-59 years, male 308.9
GTEX-1B8SF-0011-R6b-SM-7MXUD 60-69 years, male 308.5
GTEX-17MF6-0011-R6b-SM-7LG6G 40-49 years, male 308.2
GTEX-1EMGI-0011-R6a-SM-9OSVR 60-69 years, male 308.2
GTEX-1HB9E-0011-R6b-SM-A9G1P 50-59 years, male 306.2
GTEX-145LS-0011-R6b-SM-5PNWL 60-69 years, female 305.8
GTEX-12ZZX-0011-R6a-SM-5HL8L 40-49 years, female 304.1
GTEX-1GN1U-0011-R6a-SM-CKZNO 50-59 years, female 302.2
GTEX-11DZ1-0011-R6b-SM-DNZZG 50-59 years, male 301.8
GTEX-131XH-0011-R6a-SM-5KM2G 50-59 years, male 300.1
GTEX-QMR6-0011-R6A-SM-32PKP 50-59 years, male 300.1
GTEX-1LH75-0011-R6a-SM-EXURS 50-59 years, female 299.5
GTEX-1EKGG-0011-R6a-SM-CL538 60-69 years, male 298.5
GTEX-14C5O-0011-R6a-SM-5YYB6 60-69 years, male 298.0
GTEX-13FLW-0011-R6b-SM-5L3EN 50-59 years, male 297.7
GTEX-11NV4-0011-R6a-SM-57WD5 60-69 years, male 296.9
GTEX-132Q8-0011-R6a-SM-5K7YN 60-69 years, male 295.9
GTEX-15DYW-0011-R6b-SM-6PALA 60-69 years, female 295.6
GTEX-1I1GR-0011-R6a-SM-CMKHI 60-69 years, male 295.6
GTEX-13X6K-0011-R6a-SM-5P9K6 60-69 years, female 294.4
GTEX-1GF9V-0011-R6b-SM-CJI2Q 60-69 years, male 293.5
GTEX-11NUK-0011-R6a-SM-DO93O 50-59 years, male 293.3
GTEX-ZDXO-0011-R6a-SM-4WWCT 60-69 years, male 292.7
GTEX-13N2G-0011-R6b-SM-5MR3P 60-69 years, male 290.6
GTEX-1H3NZ-0011-R6b-SM-A9G1N 60-69 years, male 289.7
GTEX-T6MN-0011-R6A-SM-32QP8 50-59 years, male 288.9
GTEX-1HBPH-0011-R6a-SM-CKZOV 40-49 years, female 288.5
GTEX-12ZZZ-0011-R6b-SM-5EQ5B 60-69 years, male 288.4
GTEX-1GF9W-0011-R6b-SM-9QEIE 60-69 years, male 287.0
GTEX-17HG3-0011-R6b-SM-79OK8 30-39 years, female 286.8
GTEX-14PQA-0011-R6b-SM-6AJAM 50-59 years, female 284.9
GTEX-1CB4G-0011-R6b-SM-9QEGO 60-69 years, male 284.9
GTEX-13SLX-0011-R6a-SM-5PNX4 50-59 years, female 283.9
GTEX-WWYW-0011-R6A-SM-3NB3G 50-59 years, female 283.5
GTEX-13G51-0011-R6b-SM-5LZX4 60-69 years, male 283.2
GTEX-13N1W-0011-R6a-SM-5MR43 70-79 years, male 282.9
GTEX-14PN4-0011-R6b-SM-69LQU 50-59 years, male 281.6
GTEX-13NYB-0011-R6b-SM-5MR51 40-49 years, male 281.4
GTEX-Z93S-0011-R6b-SM-4RGNJ 50-59 years, male 281.4
GTEX-1192X-0011-R6a-SM-DNZZB 50-59 years, male 281.2
GTEX-13O3O-0011-R6b-SM-5P9GY 60-69 years, female 280.4
GTEX-X585-0011-R6A-SM-46MVJ 50-59 years, male 279.9
GTEX-WHSE-0011-R6A-SM-3P5ZP 20-29 years, male 278.9
GTEX-1C6VR-0011-R6a-SM-7MXU8 60-69 years, male 278.8
GTEX-1GMR8-0011-R6b-SM-CE6RC 50-59 years, female 277.2
GTEX-147GR-0011-R6b-SM-5S2RO 60-69 years, male 276.1
GTEX-14ABY-0011-R6a-SM-5PNWR 50-59 years, male 275.9
GTEX-1C6WA-0011-R6a-SM-7PBYP 60-69 years, male 275.2
GTEX-1H1CY-0011-R6b-SM-CE6RP 60-69 years, female 274.5
GTEX-T2IS-0011-R6A-SM-32QP2 20-29 years, female 273.6
GTEX-1H1ZS-0011-R6b-SM-A9G1F 70-79 years, male 273.5
GTEX-N7MT-0011-R6a-SM-2I3G3 60-69 years, female 272.9
GTEX-144GL-0011-R6a-SM-5P9HW 50-59 years, male 272.5
GTEX-1F6I4-0011-R6a-SM-CE6R4 60-69 years, male 271.4
GTEX-S7SE-0011-R6A-SM-2XCD9 50-59 years, male 269.5
GTEX-1HGF4-0011-R6a-SM-A96S1 60-69 years, male 269.4
GTEX-QVJO-0011-R6A-SM-2S1QN 60-69 years, female 268.3
GTEX-14BIM-0011-R6b-SM-5S2VB 60-69 years, female 268.2
GTEX-XMD1-0011-R6A-SM-4AT5K 60-69 years, male 267.1
GTEX-X4XX-0011-R6B-SM-46MWP 60-69 years, male 264.8
GTEX-ZXG5-0011-R6a-SM-57WBZ 60-69 years, male 264.0
GTEX-13FXS-0011-R6b-SM-5L3F7 50-59 years, male 261.1
GTEX-13112-0011-R6b-SM-5DUVK 50-59 years, male 260.3
GTEX-139TT-0011-R6b-SM-5J2ON 60-69 years, male 259.7
GTEX-UTHO-0011-R6A-SM-3GIJW 60-69 years, male 259.6
GTEX-1J1OQ-0011-R6a-SM-ARU86 40-49 years, female 253.9
GTEX-Y8DK-0011-R6A-SM-4V6EG 60-69 years, male 252.9
GTEX-13S7M-0011-R6b-SM-5O9D8 60-69 years, female 251.8
GTEX-1H1DG-0011-R6a-SM-A9SK8 70-79 years, male 251.0
GTEX-1B996-0011-R6b-SM-793AQ 60-69 years, male 250.6
GTEX-12ZZY-0011-R6b-SM-5EGLA 60-69 years, male 250.2
GTEX-X4EP-0011-R6A-SM-3P629 60-69 years, female 249.8
GTEX-NPJ8-0011-R6a-SM-2HMKB 40-49 years, male 249.4
GTEX-1IKK5-0011-R6b-SM-A9SLY 60-69 years, male 247.8
GTEX-14ASI-0011-R6a-SM-5S2UZ 60-69 years, male 246.9
GTEX-1GZ2Q-0011-R6a-SM-9OSWM 40-49 years, male 245.9
GTEX-NL4W-0011-R6a-SM-2I3GA 50-59 years, male 245.4
GTEX-ZE9C-0011-R6a-SM-4WWCW 60-69 years, male 245.3
GTEX-17HHY-0011-R6b-SM-7189Z 50-59 years, male 245.0
GTEX-12WSE-0011-R6b-SM-5LZV5 20-29 years, male 242.7
GTEX-WL46-0011-R6A-SM-3LK6X 50-59 years, male 242.7
GTEX-P44G-0011-R6A-SM-2XCD3 30-39 years, male 242.3
GTEX-1MA7X-0011-R6a-SM-EYYWR 60-69 years, male 242.0
GTEX-1I1GQ-0011-R6b-SM-CE6SE 50-59 years, male 240.1
GTEX-1HBPI-0011-R6b-SM-A9G1T 50-59 years, male 237.0
GTEX-WVLH-0011-R6A-SM-3MJFZ 50-59 years, male 235.4
GTEX-1HUB1-0011-R6b-SM-ARU6W 60-69 years, male 235.4
GTEX-11PRG-0011-R6b-SM-DO923 50-59 years, male 233.4
GTEX-144GO-0011-R6b-SM-5S2V7 60-69 years, male 231.2
GTEX-1399T-0011-R6b-SM-5K7YL 60-69 years, male 230.6
GTEX-1JJEA-0011-R6a-SM-EXUS1 60-69 years, male 230.6
GTEX-T5JC-0011-R6A-SM-D3L87 20-29 years, male 229.8
GTEX-14LZ3-0011-R6a-SM-D3L8C 60-69 years, female 228.7
GTEX-11DYG-0011-R6a-SM-DO936 60-69 years, male 227.9
GTEX-15DCD-0011-R6b-SM-6M46L 70-79 years, female 226.3
GTEX-147F4-0011-R6b-SM-5S2UP 50-59 years, male 223.5
GTEX-1E1VI-0011-R6a-SM-9OSVJ 50-59 years, male 223.2
GTEX-ZAB4-0011-R6a-SM-4SOKD 40-49 years, male 222.8
GTEX-R55E-0011-R6A-SM-2TC5T 20-29 years, male 221.6
GTEX-ZVZQ-0011-R6b-SM-57WAY 60-69 years, female 219.1
GTEX-11ONC-0011-R6a-SM-DO12A 60-69 years, male 218.6
GTEX-QVUS-0011-R6A-SM-3GACX 60-69 years, female 217.4
GTEX-13QJC-0011-R6a-SM-5S2VI 60-69 years, female 217.1
GTEX-YFC4-0011-R6b-SM-4V6E1 40-49 years, female 214.1
GTEX-RU72-0011-R6A-SM-2TF71 50-59 years, female 211.2
GTEX-11TTK-0011-R6b-SM-DNZZW 60-69 years, female 207.4
GTEX-YJ89-0011-R6a-SM-4V6GN 60-69 years, male 206.3
GTEX-18465-0011-R6a-SM-7LG6M 50-59 years, male 203.6
GTEX-13JVG-0011-R6a-SM-5MR3E 60-69 years, male 202.0
GTEX-1F48J-0011-R6a-SM-CJI2F 50-59 years, female 200.2
GTEX-1GN2E-0011-R6b-SM-9QEII 60-69 years, male 199.4
GTEX-12WSM-0011-R6b-SM-5EQ6N 60-69 years, male 198.1
GTEX-ZUA1-0011-R6b-SM-4YCDD 40-49 years, male 196.7
GTEX-1LVA9-0011-R6a-SM-EYYWH 50-59 years, male 195.9
GTEX-13JUV-0011-R6b-SM-5LZYG 40-49 years, female 195.8
GTEX-11O72-0011-R6a-SM-DNZZQ 40-49 years, male 195.3
GTEX-183WM-0011-R6b-SM-72D66 70-79 years, female 191.0
GTEX-1HFI6-0011-R6b-SM-CM2SR 40-49 years, male 187.2
GTEX-13OVJ-0011-R6b-SM-5L3GH 50-59 years, female 186.9
GTEX-1N2DW-0011-R6a-SM-EZ6MW 50-59 years, male 185.1
GTEX-11GSP-0011-R6b-SM-57WBQ 60-69 years, female 183.7
GTEX-12ZZW-0011-R6a-SM-5DUVZ 50-59 years, male 183.6
GTEX-15EO6-0011-R6a-SM-7KULK 50-59 years, male 183.2
GTEX-1I19N-0011-R6b-SM-CY8GC 70-79 years, male 182.4
GTEX-1BAJH-0011-R6b-SM-7MXT2 70-79 years, male 179.8
GTEX-145LU-0011-R6a-SM-5S2V6 50-59 years, male 178.2
GTEX-13OW5-0011-R6b-SM-5O9BW 60-69 years, male 177.9
GTEX-13SLW-0011-R6a-SM-5O9BH 70-79 years, male 177.9
GTEX-1I1GS-0011-R6b-SM-CMKHE 60-69 years, male 175.6
GTEX-17EVQ-0011-R6a-SM-7189U 70-79 years, male 175.2
GTEX-17JCI-0011-R6a-SM-72D6D 60-69 years, female 174.2
GTEX-1CB4J-0011-R6b-SM-9WG7B 60-69 years, male 173.6
GTEX-ZF28-0011-R6a-SM-4WKHI 60-69 years, male 171.8
GTEX-X4XY-0011-R6B-SM-46MVB 60-69 years, male 171.5
GTEX-1HBPM-0011-R6b-SM-ARU73 60-69 years, female 171.4
GTEX-145MI-0011-R6a-SM-5PNZA 60-69 years, female 171.0
GTEX-13OW8-0011-R6b-SM-5L3I3 60-69 years, male 170.6
GTEX-11WQC-0011-R6a-SM-5BC77 60-69 years, male 170.1
GTEX-13FHP-0011-R6b-SM-5LZY6 50-59 years, male 169.3
GTEX-1GMRU-0011-R6b-SM-A9G3B 50-59 years, male 167.5
GTEX-1445S-0011-R6b-SM-5PNUF 60-69 years, male 164.3
GTEX-ZVT3-0011-R6a-SM-51MSU 60-69 years, female 162.1
GTEX-PWO3-0011-R6A-SM-2I5F3 60-69 years, female 161.4
GTEX-13IVO-0011-R6b-SM-5K7X9 70-79 years, male 161.1
GTEX-X261-0011-R6B-SM-4E3J8 50-59 years, male 160.1
GTEX-1H4P4-0011-R6a-SM-ARZLR 50-59 years, male 158.7
GTEX-1LB8K-0011-R6a-SM-EXURT 50-59 years, male 158.7
GTEX-1IL2U-0011-R6a-SM-ARZLG 60-69 years, male 156.0
GTEX-15G19-0011-R6b-SM-7KUM3 60-69 years, male 155.6
GTEX-16Z82-0011-R6a-SM-7IGLV 60-69 years, male 155.6
GTEX-1RLM8-0011-R6a-SM-EYYXS 50-59 years, male 155.6
GTEX-1CB4H-0011-R6b-SM-CKZNK 60-69 years, female 155.4
GTEX-1EH9U-0011-R6a-SM-CJI2C 60-69 years, male 155.2
GTEX-ZV68-0011-R6a-SM-51MSR 50-59 years, female 153.0
GTEX-1H3VE-0011-R6b-SM-A9G1M 40-49 years, male 152.8
GTEX-OHPN-0011-R6A-SM-2I5FH 60-69 years, female 151.8
GTEX-1H3O1-0011-R6b-SM-CL54U 60-69 years, male 151.3
GTEX-1R46S-0011-R6a-SM-EZ6N6 60-69 years, female 149.8
GTEX-1I1HK-0011-R6b-SM-CM2T9 60-69 years, male 149.2
GTEX-139TS-0011-R6a-SM-5J2OB 60-69 years, male 148.8
GTEX-1LC47-0011-R6b-SM-EZ6MI 60-69 years, male 148.3
GTEX-13OVH-0011-R6b-SM-5LUAX 70-79 years, male 146.7
GTEX-1F88E-0011-R6a-SM-CKZNW 60-69 years, female 146.1
GTEX-16XZZ-0011-R6a-SM-7IGNE 60-69 years, male 145.6
GTEX-ZE7O-0011-R6a-SM-57WCI 50-59 years, female 145.4
GTEX-1A8G6-0011-R6b-SM-7P8PE 60-69 years, male 144.9
GTEX-S7PM-0011-R6A-SM-3NM8F 60-69 years, male 144.5
GTEX-1H23P-0011-R6b-SM-A9G1H 60-69 years, male 144.3
GTEX-1IKOH-0011-R6b-SM-A9G1W 60-69 years, female 140.5
GTEX-QDT8-0011-R6A-SM-32PKI 30-39 years, female 140.3
GTEX-1GZHY-0011-R6a-SM-9OSWL 50-59 years, female 139.6
GTEX-14PHW-0011-R6b-SM-5YYAR 60-69 years, female 138.2
GTEX-13PDP-0011-R6b-SM-5O9D5 60-69 years, male 138.1
GTEX-1F75B-0011-R6a-SM-ARZMI 50-59 years, male 135.7
GTEX-P44H-0011-R6A-SM-2XCF3 40-49 years, male 130.7
GTEX-1E2YA-0011-R6b-SM-CE6R2 50-59 years, male 130.3
GTEX-131XW-0011-R6b-SM-5K7XY 50-59 years, female 130.1
GTEX-1IGQW-0011-R6a-SM-CM2TC 60-69 years, male 127.0
GTEX-13PL6-0011-R6a-SM-5O9C5 40-49 years, female 125.6
GTEX-1EN7A-0011-R6b-SM-9QEHW 40-49 years, male 122.3
GTEX-1C64N-0011-R6a-SM-7IGO9 50-59 years, male 121.4
GTEX-1EWIQ-0011-R6a-SM-ARU8G 70-79 years, female 120.5
GTEX-12584-0011-R6a-SM-5NQ7C 40-49 years, male 102.7
GTEX-14753-0011-R6b-SM-5S2UD 60-69 years, male 101.6
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Brain - Putamen (basal ganglia)
Average nTPM: 218.5
Samples: 205

Max nTPM: 352.4
Min nTPM: 121.2
Std nTPM: 52.5
Median nTPM: 207.8
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 352.4
GTEX-S7SE-0011-R7A-SM-2XCDI 50-59 years, male 342.5
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 341.5
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 331.5
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 327.6
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 327.5
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 325.8
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 325.2
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 323.6
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 320.9
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 315.1
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 311.1
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 310.6
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 310.2
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 308.8
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 308.7
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 307.6
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 306.4
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 305.3
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 304.8
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 302.8
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 302.3
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 302.1
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 299.6
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 299.3
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 295.2
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 293.4
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 291.1
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 288.5
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 286.6
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 280.6
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 279.8
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 277.7
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 277.1
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 273.7
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 272.0
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 271.6
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 271.2
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 269.9
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 269.4
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 267.2
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 266.3
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 265.5
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 265.3
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 260.6
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 260.2
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 259.9
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 259.5
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 257.5
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 254.7
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 254.1
GTEX-QVJO-0011-R7A-SM-2S1QO 60-69 years, female 253.7
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 252.2
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 251.9
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 247.2
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 246.9
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 245.2
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 244.6
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 243.8
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 241.5
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 241.4
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 240.3
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 240.2
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 239.6
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 239.3
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 238.9
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 238.9
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 236.0
GTEX-1J1OQ-0011-R7b-SM-ARU87 40-49 years, female 235.6
GTEX-P44G-0011-R7A-SM-2I3F9 30-39 years, male 235.5
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 234.7
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 234.0
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 233.7
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 233.0
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 232.9
GTEX-NPJ8-0011-R7a-SM-2HMJV 40-49 years, male 229.2
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 229.1
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 228.4
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 227.9
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 226.3
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 225.5
GTEX-N7MS-0011-R7a-SM-2HMKN 60-69 years, male 225.1
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 222.6
GTEX-R55E-0011-R7A-SM-2TC5Z 20-29 years, male 222.2
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 221.2
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 221.2
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 221.1
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 219.6
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 219.5
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 218.5
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 217.7
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 217.6
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 217.5
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 216.1
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 214.9
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 214.6
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 213.8
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 213.7
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 213.5
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 211.9
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 211.7
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 210.7
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 207.8
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 207.7
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 206.4
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 204.8
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 204.2
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 204.2
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 204.2
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 202.9
GTEX-TSE9-0011-R7A-SM-3DB7P 60-69 years, female 202.9
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 202.3
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 200.5
GTEX-NL3H-0011-R7a-SM-2I3G5 60-69 years, male 200.1
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 197.9
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 197.8
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 197.6
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 197.3
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 197.1
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 196.2
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 195.7
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 195.7
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 195.3
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 195.2
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 195.1
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 194.5
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 194.2
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 193.5
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 191.5
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 191.3
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 190.5
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 189.9
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 189.0
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 187.5
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 187.4
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 187.3
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 187.3
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 187.0
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 186.4
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 185.1
GTEX-RU72-0011-R7A-SM-2TF5U 50-59 years, female 185.0
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 182.9
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 182.7
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 181.3
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 181.0
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 180.4
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 180.3
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 179.8
GTEX-1IOXB-0011-R7b-SM-CE6SM 50-59 years, male 177.1
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 176.6
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 176.5
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 176.5
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 176.0
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 175.9
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 175.4
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 175.0
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 174.6
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 173.9
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 173.6
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 173.5
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 173.1
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 172.9
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 172.9
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 172.7
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 172.2
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 171.2
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 170.8
GTEX-18464-0011-R7b-SM-731CM 50-59 years, male 170.1
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 169.4
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 169.0
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 168.0
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 167.8
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 167.2
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 166.6
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 166.6
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 166.1
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 166.0
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 164.1
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 163.1
GTEX-OHPN-0011-R7A-SM-2I5FI 60-69 years, female 163.0
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 162.6
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 162.0
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 161.7
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 161.4
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 160.1
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 159.8
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 158.6
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 157.2
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 155.6
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 155.5
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 154.4
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 151.1
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 150.1
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 147.3
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 147.3
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 147.2
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 146.5
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 146.3
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 140.4
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 140.1
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 132.8
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 131.8
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 129.7
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 128.3
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 121.2
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BASAL GANGLIA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

362.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 249.2
FF:10164-103B2 76 years, female 249.2
Nucleus accumbens
Scaled Tags Per Million: 325.8
FF:10037-101F1 23-56 years, mixed 325.8
Putamen
Scaled Tags Per Million: 362.0
FF:10176-103C5 60 years, female 362.0
Globus pallidus
Scaled Tags Per Million: 181.0
FF:10175-103C4 60 years, female 196.9
FF:10161-103A8 76 years, female 165.0

BASAL GANGLIA - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

202.3
Pig sample Sample description nTPM
Caudate
nTPM: 188.2
Samples: 4

Max nTPM: 223.7
Min nTPM: 162.9
Sample A Female 162.9
Sample B Female 195.0
Sample C Male 223.7
Sample D Male 171.3
Putamen
nTPM: 202.3
Samples: 4

Max nTPM: 273.3
Min nTPM: 168.5
Sample A Female 168.5
Sample B Female 169.2
Sample C Male 273.3
Sample D Male 198.2
Septum
nTPM: 189.1
Samples: 4

Max nTPM: 240.0
Min nTPM: 161.7
Sample A Female 184.0
Sample B Female 170.6
Sample C Male 240.0
Sample D Male 161.7
Ventral pallidum
nTPM: 183.6
Samples: 4

Max nTPM: 238.7
Min nTPM: 148.9
Sample A Female 163.5
Sample B Female 183.3
Sample C Male 238.7
Sample D Male 148.9

BASAL GANGLIA - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

739.3
Mouse sample Sample description nTPM
Caudate putamen
nTPM: 656.4
Samples: 4

Max nTPM: 673.6
Min nTPM: 626.7
Sample A Male 654.1
Sample B Male 626.7
Sample C Female 673.6
Sample D Female 671.2
Septum
nTPM: 708.7
Samples: 4

Max nTPM: 770.6
Min nTPM: 635.9
Sample A Male 770.6
Sample B Male 704.6
Sample C Female 723.7
Sample D Female 635.9
Ventral forebrain
nTPM: 739.3
Samples: 4

Max nTPM: 768.5
Min nTPM: 707.9
Sample A Male 707.9
Sample B Male 723.7
Sample C Female 768.5
Sample D Female 757.1

BASAL GANGLIA - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

6.3
Allen experiment id Experiment description Expression energy
Striatum
Expression energy: 5.4
101 Antisense, RP_Baylor_102629, Mouse strain C57BL/6J (56 days, male) 5.4
Pallidum
Expression energy: 6.3
101 Antisense, RP_Baylor_102629, Mouse strain C57BL/6J (56 days, male) 6.3

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