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TISSUE PRIMARY DATA VAGINA Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM
ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MIDBRAIN NASOPHARYNX
ORAL MUCOSA OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE
SMOOTH MUSCLE SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
ANTIBODIES
AND
VALIDATION
Dictionary
Vagina
Tissue proteome
Vagina
VAGINA - Expression summary
Protein expression
Vaginai

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Squamous epithelial cells: Low
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:184.3 nTPM
GTEx:184.3 nTPM
FANTOM5:152.2 Scaled Tags Per Million

VAGINA - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA036849
Squamous epithelial cells Low



VAGINA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

184.3
GTEx sample id Sample description nTPM
Vagina
Average nTPM: 184.3
Samples: 156

Max nTPM: 297.1
Min nTPM: 140.7
Std nTPM: 24.3
Median nTPM: 180.4
GTEX-1S5ZU-2626-SM-E9TII 20-29 years, female 297.1
GTEX-X8HC-2826-SM-46MWJ 50-59 years, female 245.0
GTEX-ZYVF-0326-SM-5GIES 50-59 years, female 240.9
GTEX-RU1J-1426-SM-46MUV 20-29 years, female 238.7
GTEX-YFC4-2926-SM-5IFJ8 40-49 years, female 238.3
GTEX-TSE9-2526-SM-4DXUS 60-69 years, female 230.9
GTEX-WEY5-0826-SM-4LMIH 40-49 years, female 228.9
GTEX-PLZ4-2726-SM-3P61A 50-59 years, female 228.7
GTEX-12WSJ-1326-SM-5GCOB 40-49 years, female 225.8
GTEX-ZQG8-1126-SM-51MRL 60-69 years, female 223.6
GTEX-131XG-2126-SM-5DUXG 50-59 years, female 223.5
GTEX-UJHI-1326-SM-4IHJO 50-59 years, female 223.0
GTEX-13D11-1326-SM-5IJFY 50-59 years, female 221.3
GTEX-11DXX-1726-SM-5H11T 60-69 years, female 217.9
GTEX-1LVAM-1926-SM-E6CIM 50-59 years, female 217.6
GTEX-1QPFJ-1626-SM-DTX7X 30-39 years, female 215.9
GTEX-1I4MK-1726-SM-ARL7O 50-59 years, female 214.8
GTEX-1NUQO-1826-SM-E6CQU 20-29 years, female 214.6
GTEX-113JC-1926-SM-5N9GE 50-59 years, female 214.3
GTEX-XV7Q-1626-SM-4BRWC 40-49 years, female 212.7
GTEX-WRHU-2926-SM-4MVNQ 50-59 years, female 211.4
GTEX-QCQG-1226-SM-48U23 50-59 years, female 210.8
GTEX-12ZZX-1926-SM-5EGKC 40-49 years, female 209.9
GTEX-15UF6-2126-SM-6M46Z 70-79 years, female 209.1
GTEX-ZLWG-1126-SM-4WWFQ 50-59 years, female 208.0
GTEX-1QP28-1426-SM-EVR4E 50-59 years, female 207.9
GTEX-12WSD-2926-SM-5LZUH 60-69 years, female 207.4
GTEX-1LNCM-1026-SM-E9U5D 50-59 years, female 206.8
GTEX-1QCLZ-2226-SM-DTX7R 60-69 years, female 205.7
GTEX-18D9A-1026-SM-7KFRU 30-39 years, female 205.4
GTEX-T2IS-1926-SM-4DM74 20-29 years, female 205.4
GTEX-TMMY-1926-SM-4DXUU 40-49 years, female 204.1
GTEX-ZGAY-2226-SM-4YCCX 40-49 years, female 202.2
GTEX-ZV6S-1326-SM-59HJA 40-49 years, female 202.2
GTEX-146FR-2426-SM-5NQAU 60-69 years, female 201.9
GTEX-13N11-1526-SM-5L3FL 50-59 years, female 201.7
GTEX-Y114-1926-SM-4TT8J 50-59 years, female 200.5
GTEX-13QIC-1826-SM-5J1MY 60-69 years, female 200.2
GTEX-11EM3-1826-SM-5A5KO 20-29 years, female 200.1
GTEX-145ME-1426-SM-5RQJS 40-49 years, female 200.0
GTEX-XUZC-1226-SM-4BRVJ 30-39 years, female 199.0
GTEX-11GSP-2226-SM-5HL5Q 60-69 years, female 198.5
GTEX-ZVT2-0626-SM-5GICR 50-59 years, female 195.5
GTEX-1F5PL-1826-SM-7P8PP 40-49 years, female 195.5
GTEX-1MCC2-1126-SM-EVYD6 30-39 years, female 195.2
GTEX-14PJ6-1626-SM-6872D 60-69 years, female 194.8
GTEX-13OVI-0926-SM-5J1MI 60-69 years, female 193.7
GTEX-13W3W-2326-SM-5LU4Y 60-69 years, female 193.5
GTEX-1GN1U-2426-SM-9KNTU 50-59 years, female 193.5
GTEX-ZP4G-0826-SM-4WWF3 20-29 years, female 193.1
GTEX-S7SF-1426-SM-4AT5A 20-29 years, female 193.0
GTEX-S4UY-1326-SM-4AD4X 40-49 years, female 191.7
GTEX-QVJO-2526-SM-CYPRA 60-69 years, female 191.3
GTEX-14JG6-0726-SM-69LQH 30-39 years, female 188.7
GTEX-1LVAN-1626-SM-CNPQ7 50-59 years, female 188.5
GTEX-13U4I-2026-SM-5LU3L 40-49 years, female 187.9
GTEX-14A5I-2726-SM-5SIB3 50-59 years, female 187.6
GTEX-147F3-1526-SM-5SIAK 50-59 years, female 187.5
GTEX-ZVT3-2726-SM-5GU5X 60-69 years, female 187.4
GTEX-1HCUA-1026-SM-A9SMI 50-59 years, female 187.1
GTEX-W5WG-1026-SM-4LMIF 50-59 years, female 186.5
GTEX-16NGA-1626-SM-72D6M 40-49 years, female 186.4
GTEX-1JN1M-2326-SM-ARZNG 60-69 years, female 185.4
GTEX-T6MO-1226-SM-4DM5S 40-49 years, female 185.2
GTEX-183WM-2126-SM-7LG4I 70-79 years, female 184.7
GTEX-13QBU-1726-SM-5IJFQ 40-49 years, female 184.3
GTEX-Y8LW-1426-SM-5RQJJ 50-59 years, female 184.3
GTEX-15ER7-2526-SM-7KUFW 20-29 years, female 184.0
GTEX-11I78-2026-SM-5987C 50-59 years, female 183.5
GTEX-1JN76-1526-SM-CNPPF 20-29 years, female 182.9
GTEX-1F48J-2526-SM-7P8TU 50-59 years, female 181.9
GTEX-ZYY3-2626-SM-5N9DH 60-69 years, female 181.7
GTEX-14BMU-1926-SM-5S2QC 20-29 years, female 181.4
GTEX-1IE54-2626-SM-CMKFY 40-49 years, female 181.4
GTEX-1LH75-1726-SM-DHXKZ 50-59 years, female 181.3
GTEX-14H4A-2426-SM-664OQ 40-49 years, female 181.2
GTEX-13PL7-2726-SM-5L3GB 60-69 years, female 181.1
GTEX-S341-1226-SM-4AD5S 40-49 years, female 180.5
GTEX-11P81-2126-SM-5HL6N 30-39 years, female 180.3
GTEX-11TTK-2726-SM-5GU58 60-69 years, female 180.3
GTEX-YJ8O-1226-SM-5P9JE 40-49 years, female 180.3
GTEX-P78B-2226-SM-3P5ZZ 40-49 years, female 179.7
GTEX-OHPN-2426-SM-E9TI5 60-69 years, female 178.9
GTEX-16NPV-2526-SM-6M483 50-59 years, female 178.2
GTEX-17JCI-2526-SM-7DHLB 60-69 years, female 178.1
GTEX-ZZPU-2226-SM-5EGIV 50-59 years, female 178.1
GTEX-1R9JW-1426-SM-DTX9K 30-39 years, female 178.0
GTEX-RWS6-1726-SM-47JXP 60-69 years, female 177.8
GTEX-1CAMS-2326-SM-793CR 40-49 years, female 177.6
GTEX-1HFI7-1126-SM-A96S5 50-59 years, female 177.6
GTEX-1EWIQ-2326-SM-7IGNF 70-79 years, female 176.9
GTEX-1IDJU-1026-SM-AHZ2U 60-69 years, female 176.9
GTEX-1C475-0526-SM-793AC 40-49 years, female 176.6
GTEX-1LGRB-2126-SM-COH48 50-59 years, female 176.5
GTEX-1MCYP-1326-SM-EV7AD 20-29 years, female 175.9
GTEX-ZC5H-2226-SM-4WAWS 40-49 years, female 175.4
GTEX-13PVR-1426-SM-5S2PW 60-69 years, female 175.0
GTEX-PX3G-2526-SM-48TZV 20-29 years, female 175.0
GTEX-1AMFI-1526-SM-73KVY 50-59 years, female 174.9
GTEX-146FH-2626-SM-5Q5E1 50-59 years, female 174.7
GTEX-PWN1-2526-SM-48TDS 40-49 years, female 174.0
GTEX-1GN1W-1526-SM-7P8TG 50-59 years, female 173.8
GTEX-1HBPH-2926-SM-9WPNX 40-49 years, female 173.8
GTEX-11EMC-1926-SM-5A5JU 60-69 years, female 173.4
GTEX-U3ZN-0926-SM-4DXTU 30-39 years, female 173.2
GTEX-QDT8-2526-SM-48TYX 30-39 years, female 172.4
GTEX-ZAK1-2426-SM-EXOHM 50-59 years, female 171.9
GTEX-11XUK-1326-SM-5EQM4 40-49 years, female 171.7
GTEX-17F9Y-2326-SM-7DUFP 70-79 years, female 171.3
GTEX-1HBPM-2726-SM-9WYUA 60-69 years, female 170.0
GTEX-14PN3-1626-SM-6AJAV 60-69 years, female 169.9
GTEX-1J8EW-2526-SM-CKZO2 60-69 years, female 169.9
GTEX-15SHU-2926-SM-7KUKT 40-49 years, female 169.5
GTEX-1GMR8-2526-SM-7RHI9 50-59 years, female 169.5
GTEX-1JMQL-2326-SM-CNNPV 50-59 years, female 169.4
GTEX-NPJ7-2526-SM-EV79A 60-69 years, female 169.3
GTEX-1A8FM-2426-SM-7IGPE 50-59 years, female 169.0
GTEX-S4P3-1126-SM-4AD52 50-59 years, female 168.8
GTEX-PWCY-1726-SM-48TD3 20-29 years, female 168.7
GTEX-XUW1-0326-SM-4BOOR 50-59 years, female 168.7
GTEX-15DYW-2926-SM-6PANA 60-69 years, female 168.6
GTEX-1J1OQ-1826-SM-CL53R 40-49 years, female 168.5
GTEX-SE5C-1126-SM-4BRWZ 40-49 years, female 168.2
GTEX-15SDE-1726-SM-6LPJS 50-59 years, female 167.2
GTEX-OHPL-2526-SM-3MJGT 60-69 years, female 166.9
GTEX-1HCU8-2026-SM-9YFLE 60-69 years, female 166.1
GTEX-1399U-1526-SM-5J2N7 50-59 years, female 165.9
GTEX-14PKU-1326-SM-6871B 40-49 years, female 165.3
GTEX-ZTPG-2226-SM-57WF9 20-29 years, female 165.2
GTEX-SN8G-2626-SM-EXUQT 50-59 years, female 162.8
GTEX-TML8-1126-SM-4DXSS 40-49 years, female 160.8
GTEX-X15G-1926-SM-4PQZQ 50-59 years, female 159.0
GTEX-145LS-2526-SM-5TDC9 60-69 years, female 158.4
GTEX-11VI4-0726-SM-5GU5B 40-49 years, female 158.1
GTEX-OHPK-2526-SM-3MJH9 50-59 years, female 157.7
GTEX-1ICG6-1626-SM-ARL81 70-79 years, female 157.4
GTEX-1117F-2526-SM-5GZY6 60-69 years, female 157.1
GTEX-1PIEJ-1926-SM-EVYB7 20-29 years, female 156.5
GTEX-N7MT-1926-SM-3LK5N 60-69 years, female 156.4
GTEX-WYVS-1426-SM-4ONCV 40-49 years, female 156.4
GTEX-1LGOU-1126-SM-D3LAI 20-29 years, female 154.2
GTEX-1I1GT-1226-SM-B2LVK 60-69 years, female 153.4
GTEX-131YS-2426-SM-5J2OD 60-69 years, female 152.7
GTEX-15SB6-1426-SM-7KUEM 50-59 years, female 152.7
GTEX-P4PP-2526-SM-3P61P 30-39 years, female 152.7
GTEX-Q734-1426-SM-DTXFX 40-49 years, female 151.6
GTEX-ZXES-0626-SM-5E45P 30-39 years, female 150.8
GTEX-14PJM-2926-SM-69LOE 50-59 years, female 149.4
GTEX-14DAQ-2326-SM-5S2QX 60-69 years, female 148.2
GTEX-Y3IK-2226-SM-4YCD4 50-59 years, female 148.1
GTEX-14AS3-1726-SM-5RQJV 40-49 years, female 148.0
GTEX-ZE7O-2426-SM-57WD7 50-59 years, female 147.0
GTEX-1GF9U-1926-SM-7P8TZ 40-49 years, female 143.6
GTEX-1HCU6-2326-SM-ACKXP 60-69 years, female 142.9
GTEX-1399S-2326-SM-5K7YV 30-39 years, female 142.7
GTEX-18A7A-2826-SM-7LT8J 50-59 years, female 140.7
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VAGINA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

152.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Vagina
Scaled Tags Per Million: 152.2
FF:10204-103F6 68 years, female 152.2

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