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BRAIN BASAL GANGLIA Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS MEDULLA OBLONGATA
MIDBRAIN OLFACTORY BULB PITUITARY GLAND PONS RETINA SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
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VALIDATION
Brain proteome
Basal ganglia
BASAL GANGLIA - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glial cells: Medium
Neuronal cells: Not detected
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:104.9 nTPM
HPA Brain:63.6 nTPM
GTEx:104.9 nTPM
FANTOM5:129.6 Scaled Tags Per Million
Pig:63.2 nTPM
Mouse:118.7 nTPM
Allen mouse:7.2 Expression energy

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA012669
Glial cells Medium
Neuronal cells Not detected



BASAL GANGLIA - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

63.6
Sample id Sample description nTPM
Caudate nucleus
nTPM: 49.6
2846 Female, age 79, unknown 58.7
2290 Female, age 72, unknown 52.8
2481 Female, age 94, left hemisphere 52.7
1857 Female, age 85, left hemisphere 48.9
2288 Male, age 75, left hemisphere 47.0
1854 Male, age 80, left hemisphere 46.6
1781 Male, age 74, unknown 46.0
2289 Male, age 61, right hemisphere 44.4
Globus pallidus, externus
nTPM: 63.6
1996 Male, age 80, right hemisphere 73.6
2646 Male, age 61, right hemisphere 67.4
2772 Female, age 79, unknown 61.1
2567 Female, age 72, unknown 59.7
2395 Male, age 75, both hemispheres 56.3
Globus pallidus, internus
nTPM: 62.8
2483 Female, age 94, right hemisphere 72.5
2287 Male, age 75, right hemisphere 70.8
2037 Male, age 80, right hemisphere 63.3
2778 Female, age 91, both hemispheres 60.7
2566 Female, age 72, unknown 60.5
1818 Male, age 74, unknown 57.5
2111 Female, age 85, right hemisphere 54.1
Nucleus accumbens
nTPM: 48.1
2698 Female, age 72, unknown 59.9
1783 Male, age 74, unknown 51.2
1806 Female, age 85, left hemisphere 48.9
2286 Male, age 75, left hemisphere 47.8
2391 Female, age 94, left hemisphere 47.8
2732 Male, age 80, right hemisphere 45.8
1856 Female, age 91, right hemisphere 43.2
2824 Male, age 61, right hemisphere 39.8
Nucleus basalis of Meynert
nTPM: 54.1
2569 Male, age 61, both hemispheres 65.2
2821 Male, age 75, both hemispheres 58.7
2484 Female, age 94, left hemisphere 47.9
2393 Male, age 80, right hemisphere 44.4
Nucleus of the diagonal band
nTPM: 39.8
1812 Female, age 91, both hemispheres 42.9
2775 Male, age 80, right hemisphere 42.3
1979 Male, age 74, unknown 41.1
2195 Female, age 85, both hemispheres 39.2
2029 Male, age 61, right hemisphere 33.3
Putamen
nTPM: 50.6
2489 Female, age 72, unknown 55.7
2482 Female, age 94, left hemisphere 55.0
2647 Male, age 75, left hemisphere 54.3
1829 Male, age 74, unknown 52.5
2466 Female, age 79, unknown 48.8
1937 Female, age 91, right hemisphere 45.7
1838 Male, age 80, right hemisphere 42.1
Septal nuclei
nTPM: 41.3
1960 Male, age 74, unknown 45.8
2199 Male, age 80, right hemisphere 44.3
2629 Female, age 94, right hemisphere 43.7
2059 Female, age 85, both hemispheres 42.3
2394 Male, age 61, left hemisphere 40.3
2031 Female, age 72, unknown 37.2
2009 Female, age 91, both hemispheres 35.6
Stria terminalis, bed nucleus
nTPM: 37.0
1974 Female, age 91, both hemispheres 40.9
2201 Male, age 74, unknown 36.4
2486 Female, age 94, both hemispheres 33.6

BASAL GANGLIA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

104.9
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 92.5
Samples: 246

Max nTPM: 169.6
Min nTPM: 40.9
Std nTPM: 18.9
Median nTPM: 90.8
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 169.6
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 154.0
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 145.4
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 144.0
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 143.0
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 142.3
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 137.3
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 136.3
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 134.0
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 133.5
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 132.6
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 129.5
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 128.7
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 126.6
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 126.1
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 126.1
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 123.8
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 121.8
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 120.8
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 119.2
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 118.6
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 117.9
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 117.9
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 117.1
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 116.0
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 115.7
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 113.3
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 112.4
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 111.9
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 111.7
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 111.4
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 111.3
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 110.4
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 110.2
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 109.6
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 109.5
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 108.6
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 108.5
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 108.4
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 107.7
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 107.6
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 107.4
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 107.1
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 106.3
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 105.4
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 104.5
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 104.1
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 104.1
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 104.1
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 104.0
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 103.8
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 103.6
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 103.6
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 103.5
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 103.1
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 103.0
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 102.4
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 102.2
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 101.5
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 101.3
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 101.1
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 101.1
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 101.0
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 100.5
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 100.5
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 100.4
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 100.0
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 100.0
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 100.0
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 99.9
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 99.9
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 99.9
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 99.7
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 99.7
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 99.6
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 99.5
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 99.5
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 99.4
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 99.0
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 99.0
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 99.0
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 98.9
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 98.8
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 98.7
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 98.6
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 98.6
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 98.5
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 98.3
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 98.1
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 97.9
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 97.8
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 97.7
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 97.3
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 97.1
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 97.0
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 96.6
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 96.5
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 96.3
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 96.0
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 95.7
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 95.5
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 95.3
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 94.0
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 94.0
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 93.8
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 93.0
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 92.9
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 92.7
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 92.6
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 92.6
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 92.4
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 92.3
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 92.2
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 92.2
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 92.1
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 92.0
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 92.0
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 92.0
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 91.9
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 91.7
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 91.4
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 91.3
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 90.8
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 90.8
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 90.6
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 90.6
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 90.4
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 90.3
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 90.3
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 90.2
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 90.1
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 89.9
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 89.8
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 89.5
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 89.4
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 88.9
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 88.8
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 88.8
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 88.3
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 88.3
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 88.0
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 87.9
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 87.9
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 87.9
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 87.6
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 87.2
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 87.2
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 86.9
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 86.8
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 86.8
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 86.6
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 86.6
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 86.4
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 86.3
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 86.3
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 86.2
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 86.0
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 85.9
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 85.8
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 85.4
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 85.2
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 85.1
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 85.0
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 84.9
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 84.4
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 84.3
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 84.2
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 84.0
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 83.9
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 83.6
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 83.5
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 83.5
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 83.2
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 82.8
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 82.7
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 82.6
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 82.5
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 82.5
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 82.3
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 82.0
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 81.9
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 81.8
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 81.5
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 81.3
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 81.1
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 80.9
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 80.8
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 80.6
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 80.3
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 79.9
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 79.5
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 78.9
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 78.6
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 78.4
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 78.4
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 78.3
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 78.2
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 78.0
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 78.0
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 77.8
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 77.6
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 77.2
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 77.1
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 76.5
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 76.0
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 75.5
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 75.4
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 74.5
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 74.1
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 74.0
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 73.8
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 73.8
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 73.6
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 73.6
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 73.5
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 72.5
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 72.2
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 72.0
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 71.9
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 71.4
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 71.4
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 70.7
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 70.3
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 70.2
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 69.7
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 69.7
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 69.6
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 69.0
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 67.1
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 66.6
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 66.6
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 65.8
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 65.8
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 65.1
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 64.5
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 64.2
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 63.9
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 62.1
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 60.9
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 60.6
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 58.8
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 52.1
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 50.3
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 49.2
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 48.8
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 40.9
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Brain - Nucleus accumbens (basal ganglia)
Average nTPM: 94.2
Samples: 246

Max nTPM: 170.0
Min nTPM: 52.1
Std nTPM: 20.5
Median nTPM: 91.3
GTEX-14753-0011-R6b-SM-5S2UD 60-69 years, male 170.0
GTEX-1J8Q2-0011-R6a-SM-CKZPG 60-69 years, male 163.2
GTEX-147F4-0011-R6b-SM-5S2UP 50-59 years, male 155.6
GTEX-13FHO-0011-R6b-SM-5LZX1 60-69 years, male 144.0
GTEX-1LVAO-0011-R6b-SM-EZ6MX 60-69 years, male 143.2
GTEX-11DYG-0011-R6a-SM-DO936 60-69 years, male 138.6
GTEX-13IVO-0011-R6b-SM-5K7X9 70-79 years, male 137.2
GTEX-12WSF-0011-R6b-SM-5HL8W 70-79 years, male 136.8
GTEX-12ZZW-0011-R6a-SM-5DUVZ 50-59 years, male 136.1
GTEX-1IGQW-0011-R6a-SM-CM2TC 60-69 years, male 135.9
GTEX-1HUB1-0011-R6b-SM-ARU6W 60-69 years, male 133.7
GTEX-11TTK-0011-R6b-SM-DNZZW 60-69 years, female 131.7
GTEX-144GO-0011-R6b-SM-5S2V7 60-69 years, male 131.3
GTEX-1BAJH-0011-R6b-SM-7MXT2 70-79 years, male 128.5
GTEX-12WSH-0011-R6b-SM-5P9F4 50-59 years, male 127.2
GTEX-13JVG-0011-R6a-SM-5MR3E 60-69 years, male 127.0
GTEX-1JJEA-0011-R6a-SM-EXUS1 60-69 years, male 126.7
GTEX-1LC47-0011-R6b-SM-EZ6MI 60-69 years, male 126.5
GTEX-139TS-0011-R6a-SM-5J2OB 60-69 years, male 125.0
GTEX-145MI-0011-R6a-SM-5PNZA 60-69 years, female 125.0
GTEX-11NV4-0011-R6a-SM-57WD5 60-69 years, male 124.8
GTEX-11DZ1-0011-R6b-SM-DNZZG 50-59 years, male 123.8
GTEX-13PDP-0011-R6b-SM-5O9D5 60-69 years, male 123.1
GTEX-16Z82-0011-R6a-SM-7IGLV 60-69 years, male 122.4
GTEX-12584-0011-R6a-SM-5NQ7C 40-49 years, male 121.8
GTEX-1H3O1-0011-R6b-SM-CL54U 60-69 years, male 120.8
GTEX-1EKGG-0011-R6a-SM-CL538 60-69 years, male 120.0
GTEX-1LB8K-0011-R6a-SM-EXURT 50-59 years, male 119.5
GTEX-1N2DW-0011-R6a-SM-EZ6MW 50-59 years, male 119.1
GTEX-1H4P4-0011-R6a-SM-ARZLR 50-59 years, male 119.0
GTEX-1A8G6-0011-R6b-SM-7P8PE 60-69 years, male 118.7
GTEX-1R46S-0011-R6a-SM-EZ6N6 60-69 years, female 118.7
GTEX-RU72-0011-R6A-SM-2TF71 50-59 years, female 118.5
GTEX-18A6Q-0011-R6a-SM-7LG6R 60-69 years, male 118.2
GTEX-145LU-0011-R6a-SM-5S2V6 50-59 years, male 117.6
GTEX-ZV68-0011-R6a-SM-51MSR 50-59 years, female 117.6
GTEX-1I1HK-0011-R6b-SM-CM2T9 60-69 years, male 117.6
GTEX-132Q8-0011-R6a-SM-5K7YN 60-69 years, male 116.6
GTEX-1LVA9-0011-R6a-SM-EYYWH 50-59 years, male 116.6
GTEX-1RLM8-0011-R6a-SM-EYYXS 50-59 years, male 115.4
GTEX-X261-0011-R6B-SM-4E3J8 50-59 years, male 115.0
GTEX-14E7W-0011-R6b-SM-5ZZV3 70-79 years, male 113.7
GTEX-12ZZX-0011-R6a-SM-5HL8L 40-49 years, female 113.4
GTEX-1EWIQ-0011-R6a-SM-ARU8G 70-79 years, female 113.4
GTEX-12ZZZ-0011-R6b-SM-5EQ5B 60-69 years, male 112.7
GTEX-11PRG-0011-R6b-SM-DO923 50-59 years, male 112.7
GTEX-1HFI6-0011-R6b-SM-CM2SR 40-49 years, male 112.6
GTEX-1IY9M-0011-R6a-SM-D4P28 60-69 years, male 112.4
GTEX-13FLV-0011-R6a-SM-5KLZ4 50-59 years, male 112.1
GTEX-1E1VI-0011-R6a-SM-9OSVJ 50-59 years, male 111.6
GTEX-13PL6-0011-R6a-SM-5O9C5 40-49 years, female 111.3
GTEX-YJ89-0011-R6a-SM-4V6GN 60-69 years, male 111.1
GTEX-ZDXO-0011-R6a-SM-4WWCT 60-69 years, male 110.8
GTEX-13N2G-0011-R6b-SM-5MR3P 60-69 years, male 110.4
GTEX-1AX9I-0011-R6a-SM-7P8PK 60-69 years, male 110.4
GTEX-14PHW-0011-R6b-SM-5YYAR 60-69 years, female 109.3
GTEX-1EH9U-0011-R6a-SM-CJI2C 60-69 years, male 108.9
GTEX-11GSP-0011-R6b-SM-57WBQ 60-69 years, female 108.1
GTEX-X4XY-0011-R6B-SM-46MVB 60-69 years, male 107.4
GTEX-13NYB-0011-R6b-SM-5MR51 40-49 years, male 106.8
GTEX-1HBPM-0011-R6b-SM-ARU73 60-69 years, female 106.5
GTEX-1F75A-0011-R6b-SM-9QEHD 50-59 years, male 106.3
GTEX-17EVQ-0011-R6a-SM-7189U 70-79 years, male 105.8
GTEX-1HR9M-0011-R6a-SM-ARU6Z 60-69 years, male 105.7
GTEX-1GN2E-0011-R6b-SM-9QEII 60-69 years, male 105.6
GTEX-131XW-0011-R6b-SM-5K7XY 50-59 years, female 104.5
GTEX-X585-0011-R6A-SM-46MVJ 50-59 years, male 104.3
GTEX-11OF3-0011-R6b-SM-57WBG 60-69 years, male 104.0
GTEX-1CB4H-0011-R6b-SM-CKZNK 60-69 years, female 103.9
GTEX-11NUK-0011-R6a-SM-DO93O 50-59 years, male 103.8
GTEX-17F97-0011-R6a-SM-7EPGS 50-59 years, male 103.6
GTEX-1H23P-0011-R6b-SM-A9G1H 60-69 years, male 102.5
GTEX-1E2YA-0011-R6b-SM-CE6R2 50-59 years, male 102.1
GTEX-13G51-0011-R6b-SM-5LZX4 60-69 years, male 101.7
GTEX-1F88E-0011-R6a-SM-CKZNW 60-69 years, female 101.7
GTEX-1C64N-0011-R6a-SM-7IGO9 50-59 years, male 101.6
GTEX-1GF9V-0011-R6b-SM-CJI2Q 60-69 years, male 101.5
GTEX-1I1CD-0011-R6b-SM-CJI3Y 60-69 years, female 101.4
GTEX-12WSM-0011-R6b-SM-5EQ6N 60-69 years, male 101.3
GTEX-1HBPH-0011-R6a-SM-CKZOV 40-49 years, female 101.1
GTEX-QVUS-0011-R6A-SM-3GACX 60-69 years, female 100.6
GTEX-1F6I4-0011-R6a-SM-CE6R4 60-69 years, male 100.5
GTEX-1I19N-0011-R6b-SM-CY8GC 70-79 years, male 100.5
GTEX-139TT-0011-R6b-SM-5J2ON 60-69 years, male 100.4
GTEX-1C6VR-0011-R6a-SM-7MXU8 60-69 years, male 100.4
GTEX-13OW5-0011-R6b-SM-5O9BW 60-69 years, male 100.1
GTEX-13S7M-0011-R6b-SM-5O9D8 60-69 years, female 100.1
GTEX-Y8DK-0011-R6A-SM-4V6EG 60-69 years, male 99.9
GTEX-1H3VE-0011-R6b-SM-A9G1M 40-49 years, male 99.2
GTEX-17MF6-0011-R6b-SM-7LG6G 40-49 years, male 99.0
GTEX-ZE9C-0011-R6a-SM-4WWCW 60-69 years, male 98.9
GTEX-14LZ3-0011-R6a-SM-D3L8C 60-69 years, female 98.0
GTEX-12WSE-0011-R6b-SM-5LZV5 20-29 years, male 97.4
GTEX-13FHP-0011-R6b-SM-5LZY6 50-59 years, male 97.3
GTEX-1IKOH-0011-R6b-SM-A9G1W 60-69 years, female 96.8
GTEX-13NYS-0011-R6b-SM-5MR3R 60-69 years, male 96.0
GTEX-ZE7O-0011-R6a-SM-57WCI 50-59 years, female 95.8
GTEX-11ONC-0011-R6a-SM-DO12A 60-69 years, male 95.8
GTEX-1I1GR-0011-R6a-SM-CMKHI 60-69 years, male 95.8
GTEX-TSE9-0011-R6A-SM-3DB7L 60-69 years, female 95.3
GTEX-17JCI-0011-R6a-SM-72D6D 60-69 years, female 95.1
GTEX-13OVH-0011-R6b-SM-5LUAX 70-79 years, male 95.0
GTEX-ZVT3-0011-R6a-SM-51MSU 60-69 years, female 94.8
GTEX-11O72-0011-R6a-SM-DNZZQ 40-49 years, male 94.7
GTEX-1EX96-0011-R6a-SM-9OSVV 50-59 years, male 94.7
GTEX-12WSC-0011-R6b-SM-5LU99 50-59 years, male 94.6
GTEX-11WQC-0011-R6a-SM-5BC77 60-69 years, male 94.5
GTEX-1IDJH-0011-R6a-SM-A9SLZ 70-79 years, male 94.5
GTEX-1MJK2-0011-R6a-SM-EXUS3 50-59 years, male 94.4
GTEX-1MA7X-0011-R6a-SM-EYYWR 60-69 years, male 94.3
GTEX-1EMGI-0011-R6a-SM-9OSVR 60-69 years, male 93.8
GTEX-1I1GS-0011-R6b-SM-CMKHE 60-69 years, male 93.7
GTEX-13JUV-0011-R6b-SM-5LZYG 40-49 years, female 93.6
GTEX-14C5O-0011-R6a-SM-5YYB6 60-69 years, male 93.1
GTEX-147GR-0011-R6b-SM-5S2RO 60-69 years, male 92.9
GTEX-1GZ2Q-0011-R6a-SM-9OSWM 40-49 years, male 92.6
GTEX-1GZHY-0011-R6a-SM-9OSWL 50-59 years, female 92.6
GTEX-13SLW-0011-R6a-SM-5O9BH 70-79 years, male 91.8
GTEX-1F75B-0011-R6a-SM-ARZMI 50-59 years, male 91.7
GTEX-1F75W-0011-R6a-SM-9QEI5 60-69 years, male 91.7
GTEX-1J1OQ-0011-R6a-SM-ARU86 40-49 years, female 91.7
GTEX-ZF28-0011-R6a-SM-4WKHI 60-69 years, male 91.4
GTEX-145MH-0011-R6a-SM-5PNZ7 50-59 years, male 91.3
GTEX-1B8SF-0011-R6b-SM-7MXUD 60-69 years, male 91.3
GTEX-1F48J-0011-R6a-SM-CJI2F 50-59 years, female 91.0
GTEX-12ZZY-0011-R6b-SM-5EGLA 60-69 years, male 90.9
GTEX-13QJC-0011-R6a-SM-5S2VI 60-69 years, female 90.4
GTEX-1445S-0011-R6b-SM-5PNUF 60-69 years, male 90.3
GTEX-ZUA1-0011-R6b-SM-4YCDD 40-49 years, male 90.2
GTEX-1GF9W-0011-R6b-SM-9QEIE 60-69 years, male 90.1
GTEX-1GMRU-0011-R6b-SM-A9G3B 50-59 years, male 90.0
GTEX-16XZZ-0011-R6a-SM-7IGNE 60-69 years, male 89.7
GTEX-11DXY-0011-R6a-SM-DNZZF 60-69 years, male 89.7
GTEX-1EN7A-0011-R6b-SM-9QEHW 40-49 years, male 89.7
GTEX-1I1GQ-0011-R6b-SM-CE6SE 50-59 years, male 89.7
GTEX-13O3O-0011-R6b-SM-5P9GY 60-69 years, female 89.6
GTEX-1GTWX-0011-R6a-SM-A96RN 60-69 years, male 89.6
GTEX-15DYW-0011-R6b-SM-6PALA 60-69 years, female 89.5
GTEX-14ASI-0011-R6a-SM-5S2UZ 60-69 years, male 89.1
GTEX-1A3MX-0011-R6a-SM-7P8S9 60-69 years, male 89.1
GTEX-15RJE-0011-R6a-SM-7DHL8 40-49 years, male 89.0
GTEX-183WM-0011-R6b-SM-72D66 70-79 years, female 88.6
GTEX-18465-0011-R6a-SM-7LG6M 50-59 years, male 88.5
GTEX-1IKK5-0011-R6b-SM-A9SLY 60-69 years, male 88.5
GTEX-13O3Q-0011-R6a-SM-5KM2V 50-59 years, male 88.3
GTEX-11DXW-0011-R6a-SM-DO11N 40-49 years, male 88.1
GTEX-1HGF4-0011-R6a-SM-A96S1 60-69 years, male 88.0
GTEX-N7MS-0011-R6a-SM-2HMJ4 60-69 years, male 87.7
GTEX-13112-0011-R6b-SM-5DUVK 50-59 years, male 87.6
GTEX-ZAB4-0011-R6a-SM-4SOKD 40-49 years, male 87.4
GTEX-14PQA-0011-R6b-SM-6AJAM 50-59 years, female 86.9
GTEX-1399T-0011-R6b-SM-5K7YL 60-69 years, male 86.5
GTEX-13OW8-0011-R6b-SM-5L3I3 60-69 years, male 86.5
GTEX-1H3NZ-0011-R6b-SM-A9G1N 60-69 years, male 86.5
GTEX-13SLX-0011-R6a-SM-5PNX4 50-59 years, female 86.4
GTEX-YFC4-0011-R6b-SM-4V6E1 40-49 years, female 86.4
GTEX-N7MT-0011-R6a-SM-2I3G3 60-69 years, female 86.3
GTEX-XMD1-0011-R6A-SM-4AT5K 60-69 years, male 86.2
GTEX-1HBPI-0011-R6b-SM-A9G1T 50-59 years, male 85.3
GTEX-1CB4G-0011-R6b-SM-9QEGO 60-69 years, male 85.1
GTEX-13X6J-0011-R6a-SM-5PNUB 50-59 years, male 85.0
GTEX-S7PM-0011-R6A-SM-3NM8F 60-69 years, male 85.0
GTEX-1192X-0011-R6a-SM-DNZZB 50-59 years, male 84.8
GTEX-1IL2U-0011-R6a-SM-ARZLG 60-69 years, male 84.7
GTEX-13N1W-0011-R6a-SM-5MR43 70-79 years, male 84.1
GTEX-1313W-0011-R6a-SM-5K7XO 50-59 years, female 84.0
GTEX-ZXG5-0011-R6a-SM-57WBZ 60-69 years, male 83.8
GTEX-1GMR8-0011-R6b-SM-CE6RC 50-59 years, female 83.7
GTEX-S7SE-0011-R6A-SM-2XCD9 50-59 years, male 83.5
GTEX-1LH75-0011-R6a-SM-EXURS 50-59 years, female 83.4
GTEX-18464-0011-R6a-SM-731CA 50-59 years, male 82.8
GTEX-1ICLZ-0011-R6b-SM-A9G3A 60-69 years, male 82.1
GTEX-17HG3-0011-R6b-SM-79OK8 30-39 years, female 82.0
GTEX-1C6WA-0011-R6a-SM-7PBYP 60-69 years, male 81.9
GTEX-1GN1U-0011-R6a-SM-CKZNO 50-59 years, female 81.6
GTEX-17HHY-0011-R6b-SM-7189Z 50-59 years, male 81.4
GTEX-14JG1-0011-R6b-SM-5YYAU 40-49 years, male 81.0
GTEX-WVLH-0011-R6A-SM-3MJFZ 50-59 years, male 81.0
GTEX-13FLW-0011-R6b-SM-5L3EN 50-59 years, male 80.9
GTEX-15EO6-0011-R6a-SM-7KULK 50-59 years, male 80.9
GTEX-1F7RK-0011-R6b-SM-ARZMG 20-29 years, female 80.9
GTEX-ZVZQ-0011-R6b-SM-57WAY 60-69 years, female 80.8
GTEX-1CB4J-0011-R6b-SM-9WG7B 60-69 years, male 80.8
GTEX-WHSE-0011-R6A-SM-3P5ZP 20-29 years, male 80.7
GTEX-14BIM-0011-R6b-SM-5S2VB 60-69 years, female 80.4
GTEX-OHPN-0011-R6A-SM-2I5FH 60-69 years, female 80.4
GTEX-14PJM-0011-R6a-SM-6872G 50-59 years, female 80.1
GTEX-Z93S-0011-R6b-SM-4RGNJ 50-59 years, male 79.5
GTEX-1GZ4I-0011-R6b-SM-9WG77 50-59 years, male 79.3
GTEX-1OJC4-0011-R6a-SM-EXOIM 50-59 years, female 79.2
GTEX-X4XX-0011-R6B-SM-46MWP 60-69 years, male 79.1
GTEX-1I1GV-0011-R6b-SM-ARU6Q 60-69 years, male 79.1
GTEX-WZTO-0011-R6B-SM-4E3J6 40-49 years, male 78.9
GTEX-1H1ZS-0011-R6b-SM-A9G1F 70-79 years, male 78.6
GTEX-Q2AG-0011-R6A-SM-2HML7 40-49 years, female 78.5
GTEX-NPJ7-0011-R6a-SM-2I3G7 60-69 years, female 77.8
GTEX-WWYW-0011-R6A-SM-3NB3G 50-59 years, female 77.2
GTEX-15CHQ-0011-R6b-SM-69LOX 60-69 years, male 77.0
GTEX-1F6IF-0011-R6a-SM-9QEIO 60-69 years, male 77.0
GTEX-15G19-0011-R6b-SM-7KUM3 60-69 years, male 76.3
GTEX-14PN4-0011-R6b-SM-69LQU 50-59 years, male 76.1
GTEX-NL4W-0011-R6a-SM-2I3GA 50-59 years, male 76.0
GTEX-14BMV-0011-R6b-SM-5YY9I 50-59 years, male 75.8
GTEX-14JIY-0011-R6b-SM-68714 60-69 years, male 75.7
GTEX-1B933-0011-R6b-SM-79OOQ 50-59 years, female 75.5
GTEX-WL46-0011-R6A-SM-3LK6X 50-59 years, male 75.0
GTEX-131XH-0011-R6a-SM-5KM2G 50-59 years, male 74.6
GTEX-144GL-0011-R6a-SM-5P9HW 50-59 years, male 74.3
GTEX-T5JC-0011-R6A-SM-D3L87 20-29 years, male 74.3
GTEX-13OVL-0011-R6a-SM-5L3G4 50-59 years, male 74.2
GTEX-12WSD-0011-R6b-SM-5P9JU 60-69 years, female 73.6
GTEX-14BIN-0011-R6a-SM-5S2RH 50-59 years, female 73.2
GTEX-1HT8W-0011-R6a-SM-CM2SY 30-39 years, male 72.8
GTEX-NPJ8-0011-R6a-SM-2HMKB 40-49 years, male 72.5
GTEX-UTHO-0011-R6A-SM-3GIJW 60-69 years, male 72.3
GTEX-1H1DG-0011-R6a-SM-A9SK8 70-79 years, male 72.3
GTEX-T2IS-0011-R6A-SM-32QP2 20-29 years, female 72.1
GTEX-1H1CY-0011-R6b-SM-CE6RP 60-69 years, female 71.6
GTEX-13OVJ-0011-R6b-SM-5L3GH 50-59 years, female 71.5
GTEX-R55E-0011-R6A-SM-2TC5T 20-29 years, male 71.1
GTEX-P44G-0011-R6A-SM-2XCD3 30-39 years, male 70.9
GTEX-13FXS-0011-R6b-SM-5L3F7 50-59 years, male 69.9
GTEX-15ER7-0011-R6a-SM-6M46M 20-29 years, female 69.8
GTEX-X4EP-0011-R6A-SM-3P629 60-69 years, female 69.4
GTEX-1B8L1-0011-R6b-SM-7P8SU 60-69 years, male 69.2
GTEX-13VXU-0011-R6a-SM-5SI71 50-59 years, male 67.8
GTEX-145LS-0011-R6b-SM-5PNWL 60-69 years, female 67.7
GTEX-14ABY-0011-R6a-SM-5PNWR 50-59 years, male 67.2
GTEX-15DCD-0011-R6b-SM-6M46L 70-79 years, female 67.0
GTEX-13X6K-0011-R6a-SM-5P9K6 60-69 years, female 66.2
GTEX-1GN73-0011-R6b-SM-CJI2T 60-69 years, male 64.8
GTEX-17EVP-0011-R6b-SM-7LT99 40-49 years, male 64.2
GTEX-1JMLX-0011-R6b-SM-EXUT9 50-59 years, male 63.3
GTEX-16YQH-0011-R6b-SM-7938T 30-39 years, male 63.0
GTEX-XLM4-0011-R6A-SM-4AT4B 60-69 years, male 62.9
GTEX-QVJO-0011-R6A-SM-2S1QN 60-69 years, female 62.7
GTEX-T6MN-0011-R6A-SM-32QP8 50-59 years, male 61.9
GTEX-13OW6-0011-R6b-SM-5L3GR 50-59 years, male 61.2
GTEX-13RTJ-0011-R6a-SM-5SI74 60-69 years, male 58.8
GTEX-NL3H-0011-R6a-SM-2I3G8 60-69 years, male 58.8
GTEX-1HB9E-0011-R6b-SM-A9G1P 50-59 years, male 57.0
GTEX-QDT8-0011-R6A-SM-32PKI 30-39 years, female 56.7
GTEX-PWO3-0011-R6A-SM-2I5F3 60-69 years, female 56.6
GTEX-P44H-0011-R6A-SM-2XCF3 40-49 years, male 55.1
GTEX-1B996-0011-R6b-SM-793AQ 60-69 years, male 53.6
GTEX-QMR6-0011-R6A-SM-32PKP 50-59 years, male 52.1
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Brain - Putamen (basal ganglia)
Average nTPM: 104.9
Samples: 205

Max nTPM: 185.9
Min nTPM: 52.7
Std nTPM: 18.7
Median nTPM: 103.4
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 185.9
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 159.9
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 156.2
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 148.1
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 144.4
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 143.8
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 139.9
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 139.3
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 139.3
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 137.9
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 134.9
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 134.6
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 134.2
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 133.4
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 133.0
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 132.3
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 131.8
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 131.5
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 130.4
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 130.0
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 129.6
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 129.4
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 129.1
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 128.9
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 128.9
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 128.3
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 127.3
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 127.1
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 126.6
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 125.8
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 124.9
GTEX-RU72-0011-R7A-SM-2TF5U 50-59 years, female 124.6
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 124.3
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 124.2
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 122.4
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 121.3
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 120.6
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 120.5
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 120.5
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 120.0
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 119.4
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 119.3
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 119.1
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 119.0
GTEX-S7SE-0011-R7A-SM-2XCDI 50-59 years, male 118.9
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 118.6
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 118.6
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 117.8
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 117.5
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 116.9
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 116.8
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 116.5
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 116.1
GTEX-18464-0011-R7b-SM-731CM 50-59 years, male 114.0
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 113.8
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 113.3
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 113.0
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 112.9
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 112.8
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 112.5
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 111.6
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 111.5
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 111.1
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 110.6
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 110.5
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 110.2
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 110.1
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 110.0
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 109.7
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 109.7
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 109.6
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 109.1
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 109.0
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 109.0
GTEX-TSE9-0011-R7A-SM-3DB7P 60-69 years, female 108.7
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 108.7
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 108.7
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 108.5
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 108.3
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 108.0
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 107.4
GTEX-P44G-0011-R7A-SM-2I3F9 30-39 years, male 107.4
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 107.0
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 106.5
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 106.4
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 106.0
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 106.0
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 105.9
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 105.8
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 105.6
GTEX-N7MS-0011-R7a-SM-2HMKN 60-69 years, male 105.4
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 105.4
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 105.3
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 104.9
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 104.1
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 104.1
GTEX-1IOXB-0011-R7b-SM-CE6SM 50-59 years, male 104.0
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 103.8
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 103.8
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 103.6
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 103.6
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 103.4
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 103.4
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 103.3
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 103.2
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 103.1
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 102.7
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 102.7
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 102.7
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 102.7
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 102.4
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 102.3
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 102.1
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 101.9
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 101.4
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 101.2
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 101.2
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 100.4
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 100.4
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 100.0
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 100.0
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 99.8
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 99.6
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 99.6
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 99.5
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 99.0
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 98.7
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 98.4
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 97.6
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 97.6
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 97.5
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 97.5
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 97.4
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 97.2
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 97.0
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 97.0
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 96.8
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 96.5
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 96.0
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 95.8
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 95.5
GTEX-NPJ8-0011-R7a-SM-2HMJV 40-49 years, male 95.1
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 94.8
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 94.6
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 94.2
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 93.8
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 93.7
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 93.4
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 92.7
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 92.6
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 92.5
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 92.3
GTEX-OHPN-0011-R7A-SM-2I5FI 60-69 years, female 92.2
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 92.1
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 91.9
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 91.9
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 91.5
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 91.4
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 91.3
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 91.2
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 91.1
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 91.1
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 90.9
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 90.3
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 90.3
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 89.7
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 89.1
GTEX-R55E-0011-R7A-SM-2TC5Z 20-29 years, male 87.8
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 87.7
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 87.7
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 87.7
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 87.6
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 87.5
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 87.3
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 87.3
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 86.8
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 86.2
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 86.0
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 85.6
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 85.5
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 85.1
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 84.9
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 84.6
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 84.4
GTEX-NL3H-0011-R7a-SM-2I3G5 60-69 years, male 83.2
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 82.5
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 81.3
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 80.7
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 80.6
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 80.2
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 79.4
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 78.9
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 78.6
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 78.0
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 77.3
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 76.4
GTEX-QVJO-0011-R7A-SM-2S1QO 60-69 years, female 76.4
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 75.5
GTEX-1J1OQ-0011-R7b-SM-ARU87 40-49 years, female 75.3
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 74.6
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 71.2
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 70.2
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 67.2
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 65.8
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 52.7
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BASAL GANGLIA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

129.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 127.3
FF:10164-103B2 76 years, female 127.3
Nucleus accumbens
Scaled Tags Per Million: 110.8
FF:10037-101F1 23-56 years, mixed 110.8
Putamen
Scaled Tags Per Million: 109.8
FF:10176-103C5 60 years, female 109.8
Globus pallidus
Scaled Tags Per Million: 129.6
FF:10161-103A8 76 years, female 129.7
FF:10175-103C4 60 years, female 129.4

BASAL GANGLIA - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

63.2
Pig sample Sample description nTPM
Caudate
nTPM: 50.3
Samples: 4

Max nTPM: 58.4
Min nTPM: 43.3
Sample A Female 46.0
Sample B Female 53.3
Sample C Male 58.4
Sample D Male 43.3
Putamen
nTPM: 63.2
Samples: 4

Max nTPM: 74.8
Min nTPM: 47.3
Sample A Female 68.5
Sample B Female 47.3
Sample C Male 74.8
Sample D Male 62.0
Septum
nTPM: 54.8
Samples: 4

Max nTPM: 61.7
Min nTPM: 50.0
Sample A Female 61.7
Sample B Female 50.0
Sample C Male 52.1
Sample D Male 55.5
Ventral pallidum
nTPM: 53.0
Samples: 4

Max nTPM: 60.5
Min nTPM: 47.1
Sample A Female 47.1
Sample B Female 60.5
Sample C Male 55.0
Sample D Male 49.5

BASAL GANGLIA - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

118.7
Mouse sample Sample description nTPM
Caudate putamen
nTPM: 116.5
Samples: 4

Max nTPM: 127.8
Min nTPM: 109.4
Sample A Male 117.8
Sample B Male 127.8
Sample C Female 109.4
Sample D Female 110.8
Septum
nTPM: 118.7
Samples: 4

Max nTPM: 127.4
Min nTPM: 112.8
Sample A Male 116.1
Sample B Male 127.4
Sample C Female 118.6
Sample D Female 112.8
Ventral forebrain
nTPM: 116.4
Samples: 4

Max nTPM: 128.2
Min nTPM: 103.0
Sample A Male 122.3
Sample B Male 111.9
Sample C Female 128.2
Sample D Female 103.0

BASAL GANGLIA - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

7.2
Allen experiment id Experiment description Expression energy
Striatum
Expression energy: 7.2
71992097 Antisense, RP_051012_04_B07, Mouse strain C57BL/6J (56 days, male) 7.2
Pallidum
Expression energy: 5.6
71992097 Antisense, RP_051012_04_B07, Mouse strain C57BL/6J (56 days, male) 5.6

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