We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
RPL29
HPA
RESOURCES
  • TISSUE
  • BRAIN
  • SINGLE CELL
  • SUBCELLULAR
  • CANCER
  • BLOOD
  • CELL LINE
  • STRUCTURE & INTERACTION
ABOUT
  • INTRODUCTION
  • HISTORY
  • ORGANIZATION
  • PUBLICATIONS
  • ANTIBODY SUBMISSION
  • ANTIBODY AVAILABILITY
  • ACKNOWLEDGMENTS
  • CONTACT
NEWS
  • NEWS ARTICLES
  • PRESS ROOM
LEARN
  • DICTIONARY
  • PROTEIN CLASSES
  • PROTEIN EVIDENCE
  • METHODS
  • EDUCATIONAL VIDEOS
DATA
  • DOWNLOADABLE DATA
  • PUBLICATION DATA
  • RELEASE HISTORY
HELP
  • ANTIBODY VALIDATION
  • ASSAYS & ANNOTATION
  • DISCLAIMER
  • HELP & FAQ
  • PRIVACY STATEMENT
  • LICENCE & CITATION
Fields »
Search result

Field
Term
Gene name
Class
Subclass
Class
Keyword
Chromosome
External id
Tissue
Cell type
Expression
Antibody panel
Tissue
Main location
Patient ID
Annotation
Tissue
Category
Tau score
Cluster
Reliability
Brain region
Category
Tau score
Brain region
Category
Tau score
Brain region
Category
Tau score
Cluster
Reliability
Tissue
Cell type
Enrichment
Cell type
Category
Tau score
Cell type
Category
Tau score
Cell type
Category
Tau score
Cell lineage
Category
Tau score
Cluster
Cluster
Location
Searches
Location
Cell line
Class
Type
Phase
Reliability
Cancer
Prognosis
Cancer
Category
Cancer
Category
Tau score
Cluster
Variants
Interacting gene (ensg_id)
Type
Number of interactions
Pathway
Category
Score
Score
Score
Validation
Validation
Validation
Validation
Antibodies
Data type
Column


  • SUMMARY

  • TISSUE

  • BRAIN

  • SINGLE CELL

  • SUBCELL

  • CANCER

  • BLOOD

  • CELL LINE

  • STRUCT & INT

  • RPL29
TISSUE PRIMARY DATA SMALL INTESTINE Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM
ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MIDBRAIN NASOPHARYNX
ORAL MUCOSA OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE
SMOOTH MUSCLE SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
ANTIBODIES
AND
VALIDATION
Dictionary
Small intestine
Tissue proteome
Intestine
SMALL INTESTINE - Expression summary
Protein expression
Small intestinei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glandular cells: High
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:1123.2 nTPM
HPA:726.5 nTPM
GTEx:1123.2 nTPM
FANTOM5:206.2 Scaled Tags Per Million

SMALL INTESTINE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA069064
Glandular cells High



SMALL INTESTINE - HPA RNA-seqi

The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.

Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
Average nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

726.5
overview
Male, age 65
Small intestine sample 232
nTPM: 992.8
Cell types%
Glandular cells:
55

Smooth muscle cells:
5

Other cell types:
40

overview
Male, age 39
Small intestine sample 233
nTPM: 737.1
Cell types%
Glandular cells:
40

Smooth muscle cells:
5

Other cell types:
55

overview
Male, age 68
Small intestine sample 234
nTPM: 509.2
Cell types%
Glandular cells:
30

Smooth muscle cells:
15

Other cell types:
55

N/A
Male, age 85
Small intestine sample 235
nTPM: 666.7

SMALL INTESTINE - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

1123.2
GTEx sample id Sample description nTPM
Small Intestine - Terminal Ileum
Average nTPM: 1123.2
Samples: 187

Max nTPM: 2146.3
Min nTPM: 676.9
Std nTPM: 271.1
Median nTPM: 1083.5
GTEX-1NSGN-2126-SM-DPRYN 50-59 years, male 2146.3
GTEX-13W3W-2026-SM-5K7UL 60-69 years, female 2094.9
GTEX-Y5V5-1826-SM-4VDS5 60-69 years, female 1996.6
GTEX-1EMGI-2826-SM-7IGMR 60-69 years, male 1853.5
GTEX-1JJE9-2226-SM-CXZJM 70-79 years, male 1834.0
GTEX-WRHK-1026-SM-4MVOD 20-29 years, female 1757.7
GTEX-1PIEJ-1526-SM-E6CP8 20-29 years, female 1721.4
GTEX-1R9K4-2326-SM-E6CRB 60-69 years, male 1710.4
GTEX-1MGNQ-2326-SM-EV7BG 40-49 years, male 1698.6
GTEX-1RAZQ-2226-SM-DPRZR 30-39 years, male 1665.1
GTEX-Y5LM-1626-SM-4VDTB 40-49 years, female 1644.7
GTEX-14PK6-1626-SM-6871I 70-79 years, female 1640.4
GTEX-1JMQK-2426-SM-CXZJU 60-69 years, male 1614.2
GTEX-11TUW-1926-SM-5BC58 60-69 years, male 1599.9
GTEX-148VJ-2226-SM-5NQ9M 70-79 years, male 1593.3
GTEX-183FY-1626-SM-793D8 20-29 years, male 1566.4
GTEX-VUSG-1726-SM-4KKZL 50-59 years, male 1548.9
GTEX-16NGA-1126-SM-7KFSY 40-49 years, female 1509.7
GTEX-1RAZA-1826-SM-DTXA2 20-29 years, male 1500.1
GTEX-1PDJ9-1826-SM-E9U66 20-29 years, male 1479.3
GTEX-14XAO-1926-SM-6ETZO 60-69 years, female 1455.0
GTEX-13NYB-1826-SM-5J1N3 40-49 years, male 1451.6
GTEX-VJYA-0926-SM-4KL1N 60-69 years, male 1450.7
GTEX-1IKOE-1926-SM-ARU7V 30-39 years, female 1435.4
GTEX-1QP28-1726-SM-E6CRK 50-59 years, female 1433.9
GTEX-1192X-2526-SM-59868 50-59 years, male 1405.5
GTEX-1OJC3-1626-SM-E9U65 20-29 years, male 1396.4
GTEX-16A39-1426-SM-6LLI6 30-39 years, female 1393.8
GTEX-1LH75-1926-SM-DIPGD 50-59 years, female 1376.3
GTEX-WH7G-1626-SM-4LVMY 40-49 years, male 1373.6
GTEX-X5EB-1626-SM-4E3IV 40-49 years, male 1354.0
GTEX-1H11D-2526-SM-9JGGU 40-49 years, male 1353.1
GTEX-1GL5R-2026-SM-7MKHP 50-59 years, male 1345.7
GTEX-1KXAM-2026-SM-DHXKI 60-69 years, male 1321.8
GTEX-1GMR3-2726-SM-7MKFB 40-49 years, male 1321.1
GTEX-X15G-1426-SM-4PQZK 50-59 years, female 1317.4
GTEX-1CB4F-1826-SM-7MGXI 60-69 years, male 1299.2
GTEX-1BAJH-2526-SM-7IGOT 70-79 years, male 1289.9
GTEX-13RTK-0826-SM-5Q5C6 20-29 years, male 1284.6
GTEX-117YX-0326-SM-5GICL 50-59 years, male 1269.9
GTEX-11VI4-1626-SM-5EQKO 40-49 years, female 1269.7
GTEX-WFJO-0926-SM-4LVM2 30-39 years, male 1265.8
GTEX-ZA64-1226-SM-5HL7B 20-29 years, male 1261.4
GTEX-1QPFJ-2626-SM-DPRZU 30-39 years, female 1258.0
GTEX-1399U-2126-SM-5IFEZ 50-59 years, female 1248.3
GTEX-11P82-0826-SM-5P9GU 20-29 years, male 1233.3
GTEX-1L5NE-1826-SM-EV79T 50-59 years, male 1232.2
GTEX-1F75I-2526-SM-9WPOZ 40-49 years, male 1223.6
GTEX-139T6-1026-SM-5IJGC 50-59 years, male 1223.5
GTEX-ZTPG-2626-SM-57WFX 20-29 years, female 1221.0
GTEX-13X6H-1826-SM-7EWCZ 50-59 years, female 1217.2
GTEX-13FH7-1226-SM-5IJFK 50-59 years, female 1216.9
GTEX-Y3I4-1326-SM-4TT8Z 50-59 years, male 1215.3
GTEX-17MFQ-1026-SM-7KFSZ 20-29 years, male 1209.3
GTEX-139YR-2226-SM-5IFFW 50-59 years, male 1198.8
GTEX-ZC5H-2326-SM-4WAYT 40-49 years, female 1195.1
GTEX-UPK5-2026-SM-4JBIM 40-49 years, male 1194.0
GTEX-11NSD-1726-SM-5N9C3 20-29 years, male 1193.5
GTEX-14BMU-1426-SM-5TDE5 20-29 years, female 1193.0
GTEX-14PKU-1626-SM-6871C 40-49 years, female 1192.6
GTEX-1R7EV-1226-SM-DTX82 40-49 years, male 1191.7
GTEX-1K9T9-2726-SM-D4P3E 50-59 years, female 1186.6
GTEX-1C475-1426-SM-793CH 40-49 years, female 1185.8
GTEX-15EU6-1826-SM-7PC1W 50-59 years, male 1184.0
GTEX-1H1DE-1426-SM-9JGHV 20-29 years, male 1182.1
GTEX-1RAZR-1826-SM-E6CRE 40-49 years, male 1175.6
GTEX-13O61-1326-SM-5KM31 60-69 years, male 1174.5
GTEX-18QFQ-1626-SM-72D7H 30-39 years, male 1172.6
GTEX-1OKEX-1126-SM-DTXEB 60-69 years, male 1166.1
GTEX-1B8KZ-1126-SM-7IGLX 50-59 years, male 1160.3
GTEX-1S82Z-1826-SM-E9TIK 30-39 years, female 1157.3
GTEX-1399R-2026-SM-5K7WN 30-39 years, male 1152.0
GTEX-XGQ4-1326-SM-4GIDU 50-59 years, male 1141.0
GTEX-ZG7Y-1926-SM-DNZZ5 50-59 years, male 1137.1
GTEX-XMK1-1826-SM-4B66F 40-49 years, male 1137.0
GTEX-14PKV-2026-SM-6AJ9A 20-29 years, female 1136.5
GTEX-XPVG-1726-SM-4B65W 50-59 years, male 1135.7
GTEX-1R9JW-1926-SM-EVR4J 30-39 years, female 1127.5
GTEX-14E6E-1626-SM-5RQI7 30-39 years, male 1112.3
GTEX-18A66-2526-SM-7KFTZ 60-69 years, male 1107.6
GTEX-ZF29-1626-SM-4WKFJ 60-69 years, female 1105.9
GTEX-1QW4Y-1226-SM-EWRMY 30-39 years, male 1105.8
GTEX-13OVI-1926-SM-5IJCG 60-69 years, female 1103.6
GTEX-1QP2A-2426-SM-EXOJA 50-59 years, male 1100.4
GTEX-ZLFU-1526-SM-4WWBT 40-49 years, male 1099.5
GTEX-Y3IK-1726-SM-4YCCR 50-59 years, female 1098.4
GTEX-131XG-1726-SM-5LZUR 50-59 years, female 1096.7
GTEX-1S5ZA-1326-SM-EV7BB 20-29 years, male 1096.6
GTEX-11XUK-1426-SM-5EQMG 40-49 years, female 1096.1
GTEX-1LGOU-1426-SM-D3L8N 20-29 years, female 1089.2
GTEX-ZXES-1526-SM-5NQ95 30-39 years, female 1087.8
GTEX-15DZA-0826-SM-6AJBF 30-39 years, female 1086.4
GTEX-1J8QM-1026-SM-C1YQA 60-69 years, female 1084.9
GTEX-1I1GT-1826-SM-ARZLW 60-69 years, female 1083.5
GTEX-13113-1226-SM-5EGHT 60-69 years, female 1083.2
GTEX-1LBAC-1526-SM-CXZKU 20-29 years, male 1082.3
GTEX-13QBU-1926-SM-5IJEW 40-49 years, female 1080.0
GTEX-Y111-2226-SM-4SOJB 50-59 years, male 1079.1
GTEX-WFG8-1626-SM-4LVMB 20-29 years, male 1069.2
GTEX-13CF3-1226-SM-5LZXN 60-69 years, female 1055.6
GTEX-12BJ1-1926-SM-5HL9Z 60-69 years, male 1054.5
GTEX-WEY5-1526-SM-4LMJF 40-49 years, female 1052.9
GTEX-1AX8Z-2526-SM-731E3 60-69 years, male 1052.5
GTEX-1R9PM-1626-SM-DPRY9 20-29 years, male 1050.8
GTEX-WFG7-1726-SM-4LVME 20-29 years, male 1045.9
GTEX-14C39-1826-SM-5ZZW4 40-49 years, male 1043.1
GTEX-145LT-1026-SM-5LU9O 40-49 years, male 1040.1
GTEX-1MUQO-2426-SM-EAZ5A 60-69 years, male 1039.8
GTEX-ZAB5-1526-SM-5HL9P 50-59 years, male 1027.6
GTEX-1B8KE-1726-SM-7IGMN 50-59 years, male 1024.8
GTEX-YB5E-1526-SM-5IFIE 40-49 years, male 1023.1
GTEX-1HSMQ-2226-SM-C1YRD 50-59 years, male 1020.8
GTEX-17KNJ-1626-SM-718AL 50-59 years, male 1015.6
GTEX-ZZ64-0526-SM-5GZXM 20-29 years, male 1015.5
GTEX-YEC4-1726-SM-4W21E 40-49 years, male 1006.4
GTEX-XUZC-1426-SM-4BRV3 30-39 years, female 1003.0
GTEX-15G1A-1726-SM-6LPI4 30-39 years, male 1002.1
GTEX-1CAMS-2426-SM-7DHMV 40-49 years, female 1001.1
GTEX-ZLWG-1626-SM-DNZZ1 50-59 years, female 995.6
GTEX-12WSK-1526-SM-5CVNO 40-49 years, female 990.0
GTEX-XBED-1426-SM-4AT4G 60-69 years, male 985.3
GTEX-16AAH-1426-SM-7KFTR 50-59 years, male 983.1
GTEX-Z9EW-0926-SM-5CVMM 40-49 years, male 981.5
GTEX-131XF-1326-SM-5GCMQ 60-69 years, male 981.4
GTEX-ZPIC-2326-SM-57WDW 40-49 years, female 978.6
GTEX-ZEX8-1826-SM-57WBH 50-59 years, male 972.8
GTEX-1JN76-1126-SM-C1YRL 20-29 years, female 967.9
GTEX-WYJK-1526-SM-4ONCW 50-59 years, male 966.1
GTEX-111YS-1426-SM-5GID8 60-69 years, male 965.0
GTEX-145ME-0926-SM-5O9AR 40-49 years, female 961.5
GTEX-ZQG8-2526-SM-57WEQ 60-69 years, female 957.8
GTEX-ZP4G-1626-SM-57WGD 20-29 years, female 950.6
GTEX-1CAMR-0826-SM-7MKFK 20-29 years, male 943.7
GTEX-11I78-1126-SM-5A5K5 50-59 years, female 942.8
GTEX-14PJ3-1326-SM-664O7 50-59 years, male 941.9
GTEX-WFON-1526-SM-4LVMP 40-49 years, male 941.6
GTEX-14DAR-1426-SM-5RQIR 50-59 years, male 935.3
GTEX-ZYFG-2026-SM-5E43Y 60-69 years, female 933.9
GTEX-1QCLZ-2126-SM-EWRNC 60-69 years, female 933.7
GTEX-ZVP2-1726-SM-5GU5P 50-59 years, male 931.6
GTEX-WY7C-1826-SM-4ONCE 50-59 years, male 930.5
GTEX-13111-1426-SM-5DUW3 50-59 years, male 928.8
GTEX-1JK1U-1226-SM-CNNPN 60-69 years, male 927.2
GTEX-16MTA-1526-SM-6LPJB 50-59 years, male 916.0
GTEX-WHSB-1026-SM-4M1XN 50-59 years, male 915.2
GTEX-ZQUD-0926-SM-57WE3 30-39 years, male 910.8
GTEX-11DXX-1626-SM-5H11H 60-69 years, female 907.1
GTEX-111CU-1326-SM-5NQ8L 50-59 years, male 905.2
GTEX-13D11-0726-SM-5LZZB 50-59 years, female 900.7
GTEX-131XE-0926-SM-5HL7J 50-59 years, male 899.6
GTEX-144GM-1026-SM-79OKU 20-29 years, male 892.1
GTEX-1497J-1926-SM-5TDCC 60-69 years, male 883.1
GTEX-XXEK-1026-SM-4BRUW 50-59 years, male 880.7
GTEX-1C64O-2526-SM-79ONO 60-69 years, male 875.7
GTEX-13FTW-2026-SM-5IJE2 40-49 years, male 870.0
GTEX-14PJ6-1726-SM-6AJBN 60-69 years, female 867.9
GTEX-11DXZ-1326-SM-5H11X 50-59 years, male 867.2
GTEX-1399S-2026-SM-5KM4B 30-39 years, female 866.1
GTEX-11EQ9-1326-SM-5985X 30-39 years, male 865.9
GTEX-133LE-1426-SM-5IFH1 20-29 years, female 863.0
GTEX-WQUQ-2426-SM-4MVNW 60-69 years, male 861.5
GTEX-Y9LG-1626-SM-5IFHM 30-39 years, male 859.5
GTEX-14PN3-2026-SM-68729 60-69 years, female 857.5
GTEX-1AMFI-1926-SM-731F2 50-59 years, female 850.3
GTEX-11LCK-1926-SM-5A5KE 30-39 years, male 844.0
GTEX-ZTX8-0526-SM-59HLD 20-29 years, male 842.1
GTEX-ZVT2-2126-SM-5NQ93 50-59 years, female 841.7
GTEX-1R7EU-1326-SM-E6CQ6 60-69 years, male 838.3
GTEX-ZF2S-1726-SM-57WFT 50-59 years, female 831.4
GTEX-ZDTT-1726-SM-5HL69 60-69 years, male 821.4
GTEX-ZLV1-1126-SM-4WWBW 60-69 years, female 820.7
GTEX-XAJ8-0526-SM-47JYK 40-49 years, male 816.5
GTEX-17HHE-1726-SM-79OKT 50-59 years, male 813.8
GTEX-1R9K5-2026-SM-E6CPS 50-59 years, male 808.4
GTEX-1GMR2-1026-SM-7MKHJ 50-59 years, male 805.9
GTEX-13O21-1026-SM-5IJDU 50-59 years, male 803.2
GTEX-YF7O-1826-SM-5IFIU 50-59 years, male 787.9
GTEX-Y114-1426-SM-4TT6W 50-59 years, female 786.0
GTEX-YFCO-1326-SM-664NV 40-49 years, male 780.8
GTEX-13PL7-2626-SM-5IFH4 60-69 years, female 779.2
GTEX-1122O-1326-SM-5H11F 60-69 years, female 765.9
GTEX-11P7K-1626-SM-5GU63 30-39 years, male 762.7
GTEX-ZPCL-1726-SM-57WEO 60-69 years, female 760.8
GTEX-14PJN-0826-SM-686ZL 30-39 years, male 760.1
GTEX-ZTSS-0926-SM-59865 40-49 years, male 742.0
GTEX-ZVZP-1826-SM-5GZXB 50-59 years, male 711.7
GTEX-1J8Q3-2526-SM-CNNQ4 60-69 years, male 676.9
Show allShow less

SMALL INTESTINE - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

206.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Small intestine
Scaled Tags Per Million: 206.2
FF:10024-101D6 15,40,85 years, mixed 206.2

Contact

  • NEWS ARTICLES
  • PRESS ROOM

The Project

  • INTRODUCTION
  • ORGANIZATION
  • PUBLICATIONS

The Human Protein Atlas

  • DOWNLOADABLE DATA
  • LICENCE & CITATION
  • HELP & FAQ
The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.


contact@proteinatlas.org