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BRAIN BASAL GANGLIA Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS MEDULLA OBLONGATA
MIDBRAIN OLFACTORY BULB PITUITARY GLAND PONS RETINA SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
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VALIDATION
Brain proteome
Basal ganglia
BASAL GANGLIA - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glial cells: Low
Neuronal cells: Low
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:93.0 nTPM
HPA Brain:70.3 nTPM
GTEx:93.0 nTPM
FANTOM5:207.7 Scaled Tags Per Million
Pig:29.1 nTPM
Mouse:92.0 nTPM
Allen mouse:11.2 Expression energy

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA008994Antibody HPA017061
Glial cells Not detectedHigh
Neuronal cells Not detectedMedium





BASAL GANGLIA - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

70.3
Sample id Sample description nTPM
Caudate nucleus
nTPM: 63.9
2846 Female, age 79, unknown 73.5
1854 Male, age 80, left hemisphere 71.6
1857 Female, age 85, left hemisphere 68.6
2290 Female, age 72, unknown 66.8
1781 Male, age 74, unknown 60.4
2288 Male, age 75, left hemisphere 58.6
2481 Female, age 94, left hemisphere 56.7
2289 Male, age 61, right hemisphere 54.7
Globus pallidus, externus
nTPM: 41.0
2395 Male, age 75, both hemispheres 50.7
2772 Female, age 79, unknown 44.4
1996 Male, age 80, right hemisphere 39.4
2567 Female, age 72, unknown 35.8
2646 Male, age 61, right hemisphere 34.7
Globus pallidus, internus
nTPM: 44.0
2287 Male, age 75, right hemisphere 55.7
2483 Female, age 94, right hemisphere 51.6
1818 Male, age 74, unknown 43.1
2778 Female, age 91, both hemispheres 42.6
2566 Female, age 72, unknown 40.4
2037 Male, age 80, right hemisphere 37.1
2111 Female, age 85, right hemisphere 37.1
Nucleus accumbens
nTPM: 66.7
1856 Female, age 91, right hemisphere 90.1
2824 Male, age 61, right hemisphere 76.6
2698 Female, age 72, unknown 69.6
1806 Female, age 85, left hemisphere 66.3
1783 Male, age 74, unknown 64.5
2286 Male, age 75, left hemisphere 63.5
2391 Female, age 94, left hemisphere 51.6
2732 Male, age 80, right hemisphere 51.5
Nucleus basalis of Meynert
nTPM: 54.1
2393 Male, age 80, right hemisphere 66.2
2821 Male, age 75, both hemispheres 61.8
2484 Female, age 94, left hemisphere 54.0
2569 Male, age 61, both hemispheres 34.4
Nucleus of the diagonal band
nTPM: 70.3
1812 Female, age 91, both hemispheres 80.7
2775 Male, age 80, right hemisphere 77.8
2195 Female, age 85, both hemispheres 68.6
2029 Male, age 61, right hemisphere 63.4
1979 Male, age 74, unknown 61.1
Putamen
nTPM: 62.7
1838 Male, age 80, right hemisphere 82.8
1937 Female, age 91, right hemisphere 74.6
2466 Female, age 79, unknown 65.9
1829 Male, age 74, unknown 63.4
2482 Female, age 94, left hemisphere 57.9
2647 Male, age 75, left hemisphere 49.7
2489 Female, age 72, unknown 44.6
Septal nuclei
nTPM: 62.5
1960 Male, age 74, unknown 72.8
2629 Female, age 94, right hemisphere 72.2
2031 Female, age 72, unknown 71.7
2009 Female, age 91, both hemispheres 68.3
2199 Male, age 80, right hemisphere 56.4
2059 Female, age 85, both hemispheres 48.9
2394 Male, age 61, left hemisphere 47.3
Stria terminalis, bed nucleus
nTPM: 66.7
1974 Female, age 91, both hemispheres 70.9
2486 Female, age 94, both hemispheres 67.5
2201 Male, age 74, unknown 61.9

BASAL GANGLIA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

93.0
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 81.9
Samples: 246

Max nTPM: 200.4
Min nTPM: 39.5
Std nTPM: 25.5
Median nTPM: 76.6
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 200.4
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 163.2
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 154.3
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 151.7
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 150.8
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 143.8
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 141.4
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 140.7
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 137.0
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 135.8
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 131.6
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 129.2
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 129.1
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 128.8
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 127.2
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 126.6
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 125.1
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 124.9
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 123.5
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 122.9
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 121.7
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 121.0
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 120.6
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 120.4
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 117.0
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 114.2
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 113.8
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 112.4
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 111.0
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 110.5
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 109.5
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 109.2
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 109.0
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 106.9
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 106.9
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 106.3
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 106.2
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 105.7
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 105.6
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 103.9
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 103.4
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 103.4
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 102.9
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 101.9
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 101.9
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 101.6
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 101.2
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 101.1
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 100.6
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 100.5
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 100.2
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 100.2
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 99.9
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 99.5
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 99.0
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 98.9
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 98.8
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 98.7
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 98.4
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 98.4
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 97.3
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 97.3
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 97.1
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 97.0
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 96.7
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 96.3
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 95.9
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 95.7
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 95.1
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 94.6
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 94.1
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 94.0
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 93.8
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 93.4
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 92.9
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 92.9
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 92.9
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 92.7
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 92.6
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 92.0
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 91.5
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 91.5
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 91.2
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 91.1
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 90.6
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 90.3
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 89.9
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 89.8
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 89.8
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 89.7
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 89.5
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 89.0
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 88.9
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 88.7
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 88.4
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 88.4
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 87.9
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 86.5
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 85.6
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 84.2
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 83.8
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 82.7
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 82.6
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 82.3
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 82.2
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 81.8
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 81.0
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 80.8
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 80.7
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 80.4
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 79.3
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 79.1
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 79.1
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 78.9
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 78.6
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 78.0
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 78.0
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 77.9
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 77.8
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 77.4
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 77.3
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 76.8
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 76.7
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 76.5
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 76.1
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 75.9
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 75.9
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 75.6
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 75.6
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 75.2
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 74.0
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 74.0
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 73.8
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 73.1
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 73.0
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 72.8
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 72.7
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 72.7
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 72.5
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 72.0
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 71.7
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 71.6
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 71.3
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 71.1
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 71.0
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 70.8
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 70.7
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 70.6
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 70.5
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 70.4
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 70.3
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 69.8
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 69.7
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 69.7
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 69.7
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 69.3
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 69.1
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 69.0
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 68.9
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 68.9
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 68.5
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 68.4
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 68.0
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 68.0
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 67.8
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 67.5
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 67.4
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 67.3
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 66.7
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 66.7
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 66.3
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 66.3
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 66.3
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 66.2
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 65.6
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 65.4
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 65.1
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 65.0
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 64.6
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 64.0
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 63.3
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 63.2
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 63.0
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 62.6
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 62.4
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 62.2
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 62.1
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 61.5
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 61.4
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 61.3
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 60.7
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 59.9
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 59.7
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 59.4
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 59.2
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 59.1
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 58.7
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 58.1
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 58.1
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 58.0
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 57.9
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 57.5
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 57.3
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 57.2
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 57.0
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 56.7
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 56.4
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 56.3
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 56.2
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 55.8
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 55.7
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 55.0
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 54.8
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 54.8
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 54.8
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 54.7
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 54.7
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 54.5
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 54.5
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 54.2
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 54.1
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 53.3
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 53.3
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 53.3
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 52.9
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 52.7
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 52.7
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 52.3
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 52.3
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 52.1
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 50.7
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 50.6
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 50.3
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 50.0
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 48.8
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 48.4
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 47.8
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 47.4
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 47.2
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 47.2
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 47.1
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 46.9
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 46.4
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 46.1
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 45.4
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 39.5
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Brain - Nucleus accumbens (basal ganglia)
Average nTPM: 93.0
Samples: 246

Max nTPM: 159.1
Min nTPM: 40.8
Std nTPM: 22.3
Median nTPM: 93.0
GTEX-1EKGG-0011-R6a-SM-CL538 60-69 years, male 159.1
GTEX-11DZ1-0011-R6b-SM-DNZZG 50-59 years, male 156.2
GTEX-1LVAO-0011-R6b-SM-EZ6MX 60-69 years, male 153.3
GTEX-1I1GR-0011-R6a-SM-CMKHI 60-69 years, male 152.0
GTEX-147F4-0011-R6b-SM-5S2UP 50-59 years, male 149.4
GTEX-TSE9-0011-R6A-SM-3DB7L 60-69 years, female 147.3
GTEX-12WSH-0011-R6b-SM-5P9F4 50-59 years, male 145.2
GTEX-1OJC4-0011-R6a-SM-EXOIM 50-59 years, female 140.2
GTEX-12WSF-0011-R6b-SM-5HL8W 70-79 years, male 139.8
GTEX-1A3MX-0011-R6a-SM-7P8S9 60-69 years, male 134.3
GTEX-12ZZX-0011-R6a-SM-5HL8L 40-49 years, female 133.7
GTEX-11NV4-0011-R6a-SM-57WD5 60-69 years, male 132.6
GTEX-11DXY-0011-R6a-SM-DNZZF 60-69 years, male 130.5
GTEX-13X6J-0011-R6a-SM-5PNUB 50-59 years, male 129.4
GTEX-1B8L1-0011-R6b-SM-7P8SU 60-69 years, male 128.2
GTEX-1F75A-0011-R6b-SM-9QEHD 50-59 years, male 127.0
GTEX-1HUB1-0011-R6b-SM-ARU6W 60-69 years, male 126.9
GTEX-UTHO-0011-R6A-SM-3GIJW 60-69 years, male 126.6
GTEX-1IY9M-0011-R6a-SM-D4P28 60-69 years, male 126.1
GTEX-Z93S-0011-R6b-SM-4RGNJ 50-59 years, male 125.3
GTEX-14E7W-0011-R6b-SM-5ZZV3 70-79 years, male 122.1
GTEX-144GO-0011-R6b-SM-5S2V7 60-69 years, male 121.9
GTEX-12WSC-0011-R6b-SM-5LU99 50-59 years, male 121.5
GTEX-12ZZZ-0011-R6b-SM-5EQ5B 60-69 years, male 121.2
GTEX-11OF3-0011-R6b-SM-57WBG 60-69 years, male 120.6
GTEX-18A6Q-0011-R6a-SM-7LG6R 60-69 years, male 119.8
GTEX-1J8Q2-0011-R6a-SM-CKZPG 60-69 years, male 119.8
GTEX-1AX9I-0011-R6a-SM-7P8PK 60-69 years, male 119.4
GTEX-1HR9M-0011-R6a-SM-ARU6Z 60-69 years, male 119.3
GTEX-13FLV-0011-R6a-SM-5KLZ4 50-59 years, male 119.0
GTEX-1F75W-0011-R6a-SM-9QEI5 60-69 years, male 118.0
GTEX-18464-0011-R6a-SM-731CA 50-59 years, male 115.5
GTEX-1HT8W-0011-R6a-SM-CM2SY 30-39 years, male 114.6
GTEX-1MJK2-0011-R6a-SM-EXUS3 50-59 years, male 114.5
GTEX-X585-0011-R6A-SM-46MVJ 50-59 years, male 113.9
GTEX-1313W-0011-R6a-SM-5K7XO 50-59 years, female 113.5
GTEX-1I1CD-0011-R6b-SM-CJI3Y 60-69 years, female 113.5
GTEX-1F7RK-0011-R6b-SM-ARZMG 20-29 years, female 113.4
GTEX-1F6I4-0011-R6a-SM-CE6R4 60-69 years, male 113.3
GTEX-1JMLX-0011-R6b-SM-EXUT9 50-59 years, male 112.3
GTEX-17MF6-0011-R6b-SM-7LG6G 40-49 years, male 111.7
GTEX-QMR6-0011-R6A-SM-32PKP 50-59 years, male 111.6
GTEX-1B8SF-0011-R6b-SM-7MXUD 60-69 years, male 110.8
GTEX-1MA7X-0011-R6a-SM-EYYWR 60-69 years, male 110.5
GTEX-17F97-0011-R6a-SM-7EPGS 50-59 years, male 110.1
GTEX-12ZZY-0011-R6b-SM-5EGLA 60-69 years, male 110.0
GTEX-13FLW-0011-R6b-SM-5L3EN 50-59 years, male 109.9
GTEX-NL3H-0011-R6a-SM-2I3G8 60-69 years, male 109.9
GTEX-1H1CY-0011-R6b-SM-CE6RP 60-69 years, female 109.8
GTEX-145LS-0011-R6b-SM-5PNWL 60-69 years, female 109.3
GTEX-1EMGI-0011-R6a-SM-9OSVR 60-69 years, male 109.3
GTEX-14BMV-0011-R6b-SM-5YY9I 50-59 years, male 108.8
GTEX-1GZ4I-0011-R6b-SM-9WG77 50-59 years, male 108.6
GTEX-1C6VR-0011-R6a-SM-7MXU8 60-69 years, male 108.5
GTEX-1E1VI-0011-R6a-SM-9OSVJ 50-59 years, male 108.1
GTEX-13O3Q-0011-R6a-SM-5KM2V 50-59 years, male 108.0
GTEX-145MH-0011-R6a-SM-5PNZ7 50-59 years, male 107.9
GTEX-17HG3-0011-R6b-SM-79OK8 30-39 years, female 107.9
GTEX-14LZ3-0011-R6a-SM-D3L8C 60-69 years, female 107.8
GTEX-14PJM-0011-R6a-SM-6872G 50-59 years, female 107.6
GTEX-139TT-0011-R6b-SM-5J2ON 60-69 years, male 107.2
GTEX-14JIY-0011-R6b-SM-68714 60-69 years, male 107.0
GTEX-17EVP-0011-R6b-SM-7LT99 40-49 years, male 106.3
GTEX-1LVA9-0011-R6a-SM-EYYWH 50-59 years, male 106.3
GTEX-14BIM-0011-R6b-SM-5S2VB 60-69 years, female 105.9
GTEX-1GMR8-0011-R6b-SM-CE6RC 50-59 years, female 105.9
GTEX-14BIN-0011-R6a-SM-5S2RH 50-59 years, female 105.7
GTEX-1B996-0011-R6b-SM-793AQ 60-69 years, male 105.7
GTEX-1H1ZS-0011-R6b-SM-A9G1F 70-79 years, male 105.5
GTEX-1LH75-0011-R6a-SM-EXURS 50-59 years, female 105.5
GTEX-11ONC-0011-R6a-SM-DO12A 60-69 years, male 105.3
GTEX-1HBPH-0011-R6a-SM-CKZOV 40-49 years, female 105.2
GTEX-1EX96-0011-R6a-SM-9OSVV 50-59 years, male 105.0
GTEX-S7SE-0011-R6A-SM-2XCD9 50-59 years, male 104.9
GTEX-1B933-0011-R6b-SM-79OOQ 50-59 years, female 104.8
GTEX-N7MS-0011-R6a-SM-2HMJ4 60-69 years, male 104.7
GTEX-15RJE-0011-R6a-SM-7DHL8 40-49 years, male 104.2
GTEX-13FHO-0011-R6b-SM-5LZX1 60-69 years, male 103.8
GTEX-1GN73-0011-R6b-SM-CJI2T 60-69 years, male 103.5
GTEX-15ER7-0011-R6a-SM-6M46M 20-29 years, female 103.3
GTEX-T2IS-0011-R6A-SM-32QP2 20-29 years, female 103.1
GTEX-T6MN-0011-R6A-SM-32QP8 50-59 years, male 103.1
GTEX-11DYG-0011-R6a-SM-DO936 60-69 years, male 103.1
GTEX-132Q8-0011-R6a-SM-5K7YN 60-69 years, male 102.7
GTEX-1HB9E-0011-R6b-SM-A9G1P 50-59 years, male 102.5
GTEX-1192X-0011-R6a-SM-DNZZB 50-59 years, male 102.3
GTEX-1GF9V-0011-R6b-SM-CJI2Q 60-69 years, male 101.5
GTEX-1I1GQ-0011-R6b-SM-CE6SE 50-59 years, male 101.5
GTEX-13G51-0011-R6b-SM-5LZX4 60-69 years, male 101.3
GTEX-ZE9C-0011-R6a-SM-4WWCW 60-69 years, male 101.1
GTEX-11PRG-0011-R6b-SM-DO923 50-59 years, male 101.0
GTEX-RU72-0011-R6A-SM-2TF71 50-59 years, female 100.7
GTEX-14C5O-0011-R6a-SM-5YYB6 60-69 years, male 100.6
GTEX-1GTWX-0011-R6a-SM-A96RN 60-69 years, male 100.5
GTEX-T5JC-0011-R6A-SM-D3L87 20-29 years, male 100.3
GTEX-14JG1-0011-R6b-SM-5YYAU 40-49 years, male 100.1
GTEX-12ZZW-0011-R6a-SM-5DUVZ 50-59 years, male 100.0
GTEX-XLM4-0011-R6A-SM-4AT4B 60-69 years, male 99.6
GTEX-1GF9W-0011-R6b-SM-9QEIE 60-69 years, male 99.3
GTEX-13VXU-0011-R6a-SM-5SI71 50-59 years, male 98.7
GTEX-1IDJH-0011-R6a-SM-A9SLZ 70-79 years, male 98.7
GTEX-11TTK-0011-R6b-SM-DNZZW 60-69 years, female 98.4
GTEX-1GN1U-0011-R6a-SM-CKZNO 50-59 years, female 98.4
GTEX-13O3O-0011-R6b-SM-5P9GY 60-69 years, female 98.3
GTEX-16YQH-0011-R6b-SM-7938T 30-39 years, male 98.3
GTEX-14ASI-0011-R6a-SM-5S2UZ 60-69 years, male 98.2
GTEX-1IGQW-0011-R6a-SM-CM2TC 60-69 years, male 98.2
GTEX-13N2G-0011-R6b-SM-5MR3P 60-69 years, male 97.8
GTEX-1F6IF-0011-R6a-SM-9QEIO 60-69 years, male 97.3
GTEX-ZXG5-0011-R6a-SM-57WBZ 60-69 years, male 96.6
GTEX-1HGF4-0011-R6a-SM-A96S1 60-69 years, male 96.6
GTEX-QVJO-0011-R6A-SM-2S1QN 60-69 years, female 96.2
GTEX-1N2DW-0011-R6a-SM-EZ6MW 50-59 years, male 96.0
GTEX-13SLX-0011-R6a-SM-5PNX4 50-59 years, female 95.6
GTEX-11NUK-0011-R6a-SM-DO93O 50-59 years, male 95.6
GTEX-1GZ2Q-0011-R6a-SM-9OSWM 40-49 years, male 95.3
GTEX-12WSD-0011-R6b-SM-5P9JU 60-69 years, female 94.8
GTEX-13NYS-0011-R6b-SM-5MR3R 60-69 years, male 94.6
GTEX-1C6WA-0011-R6a-SM-7PBYP 60-69 years, male 94.4
GTEX-13112-0011-R6b-SM-5DUVK 50-59 years, male 94.0
GTEX-13OVL-0011-R6a-SM-5L3G4 50-59 years, male 93.5
GTEX-14ABY-0011-R6a-SM-5PNWR 50-59 years, male 93.2
GTEX-WZTO-0011-R6B-SM-4E3J6 40-49 years, male 93.1
GTEX-1I19N-0011-R6b-SM-CY8GC 70-79 years, male 92.9
GTEX-131XH-0011-R6a-SM-5KM2G 50-59 years, male 92.6
GTEX-1ICLZ-0011-R6b-SM-A9G3A 60-69 years, male 92.6
GTEX-1CB4G-0011-R6b-SM-9QEGO 60-69 years, male 92.4
GTEX-1I1GV-0011-R6b-SM-ARU6Q 60-69 years, male 92.4
GTEX-13QJC-0011-R6a-SM-5S2VI 60-69 years, female 91.6
GTEX-1BAJH-0011-R6b-SM-7MXT2 70-79 years, male 91.3
GTEX-WWYW-0011-R6A-SM-3NB3G 50-59 years, female 91.2
GTEX-11O72-0011-R6a-SM-DNZZQ 40-49 years, male 90.6
GTEX-ZVZQ-0011-R6b-SM-57WAY 60-69 years, female 90.1
GTEX-QVUS-0011-R6A-SM-3GACX 60-69 years, female 90.0
GTEX-X4XX-0011-R6B-SM-46MWP 60-69 years, male 89.9
GTEX-13S7M-0011-R6b-SM-5O9D8 60-69 years, female 89.7
GTEX-145MI-0011-R6a-SM-5PNZA 60-69 years, female 89.3
GTEX-15CHQ-0011-R6b-SM-69LOX 60-69 years, male 89.3
GTEX-P44G-0011-R6A-SM-2XCD3 30-39 years, male 89.1
GTEX-Y8DK-0011-R6A-SM-4V6EG 60-69 years, male 88.7
GTEX-11DXW-0011-R6a-SM-DO11N 40-49 years, male 88.6
GTEX-Q2AG-0011-R6A-SM-2HML7 40-49 years, female 88.5
GTEX-R55E-0011-R6A-SM-2TC5T 20-29 years, male 88.4
GTEX-13NYB-0011-R6b-SM-5MR51 40-49 years, male 87.6
GTEX-WHSE-0011-R6A-SM-3P5ZP 20-29 years, male 86.8
GTEX-NPJ7-0011-R6a-SM-2I3G7 60-69 years, female 86.7
GTEX-12WSM-0011-R6b-SM-5EQ6N 60-69 years, male 86.5
GTEX-13OW5-0011-R6b-SM-5O9BW 60-69 years, male 86.1
GTEX-183WM-0011-R6b-SM-72D66 70-79 years, female 85.9
GTEX-1JJEA-0011-R6a-SM-EXUS1 60-69 years, male 85.4
GTEX-12WSE-0011-R6b-SM-5LZV5 20-29 years, male 84.9
GTEX-XMD1-0011-R6A-SM-4AT5K 60-69 years, male 84.9
GTEX-1J1OQ-0011-R6a-SM-ARU86 40-49 years, female 84.5
GTEX-1LC47-0011-R6b-SM-EZ6MI 60-69 years, male 84.3
GTEX-13OW6-0011-R6b-SM-5L3GR 50-59 years, male 84.2
GTEX-17EVQ-0011-R6a-SM-7189U 70-79 years, male 84.1
GTEX-1H3NZ-0011-R6b-SM-A9G1N 60-69 years, male 83.6
GTEX-ZV68-0011-R6a-SM-51MSR 50-59 years, female 83.4
GTEX-13RTJ-0011-R6a-SM-5SI74 60-69 years, male 83.3
GTEX-13X6K-0011-R6a-SM-5P9K6 60-69 years, female 83.1
GTEX-1HBPI-0011-R6b-SM-A9G1T 50-59 years, male 83.0
GTEX-14753-0011-R6b-SM-5S2UD 60-69 years, male 82.9
GTEX-13N1W-0011-R6a-SM-5MR43 70-79 years, male 82.6
GTEX-1H1DG-0011-R6a-SM-A9SK8 70-79 years, male 82.6
GTEX-13SLW-0011-R6a-SM-5O9BH 70-79 years, male 82.2
GTEX-ZDXO-0011-R6a-SM-4WWCT 60-69 years, male 81.8
GTEX-1H3O1-0011-R6b-SM-CL54U 60-69 years, male 81.8
GTEX-1GN2E-0011-R6b-SM-9QEII 60-69 years, male 81.3
GTEX-15DCD-0011-R6b-SM-6M46L 70-79 years, female 81.2
GTEX-17JCI-0011-R6a-SM-72D6D 60-69 years, female 81.2
GTEX-11WQC-0011-R6a-SM-5BC77 60-69 years, male 81.1
GTEX-15DYW-0011-R6b-SM-6PALA 60-69 years, female 81.0
GTEX-17HHY-0011-R6b-SM-7189Z 50-59 years, male 81.0
GTEX-1EH9U-0011-R6a-SM-CJI2C 60-69 years, male 80.9
GTEX-145LU-0011-R6a-SM-5S2V6 50-59 years, male 80.8
GTEX-1399T-0011-R6b-SM-5K7YL 60-69 years, male 80.6
GTEX-WVLH-0011-R6A-SM-3MJFZ 50-59 years, male 80.2
GTEX-13FHP-0011-R6b-SM-5LZY6 50-59 years, male 79.4
GTEX-18465-0011-R6a-SM-7LG6M 50-59 years, male 79.1
GTEX-11GSP-0011-R6b-SM-57WBQ 60-69 years, female 79.0
GTEX-14PQA-0011-R6b-SM-6AJAM 50-59 years, female 78.6
GTEX-OHPN-0011-R6A-SM-2I5FH 60-69 years, female 78.6
GTEX-147GR-0011-R6b-SM-5S2RO 60-69 years, male 78.5
GTEX-16XZZ-0011-R6a-SM-7IGNE 60-69 years, male 78.3
GTEX-1IKK5-0011-R6b-SM-A9SLY 60-69 years, male 78.3
GTEX-1GMRU-0011-R6b-SM-A9G3B 50-59 years, male 77.7
GTEX-144GL-0011-R6a-SM-5P9HW 50-59 years, male 77.4
GTEX-NPJ8-0011-R6a-SM-2HMKB 40-49 years, male 77.2
GTEX-1I1GS-0011-R6b-SM-CMKHE 60-69 years, male 77.1
GTEX-YJ89-0011-R6a-SM-4V6GN 60-69 years, male 76.2
GTEX-1F88E-0011-R6a-SM-CKZNW 60-69 years, female 75.8
GTEX-WL46-0011-R6A-SM-3LK6X 50-59 years, male 75.3
GTEX-14PN4-0011-R6b-SM-69LQU 50-59 years, male 74.6
GTEX-1CB4H-0011-R6b-SM-CKZNK 60-69 years, female 74.6
GTEX-13FXS-0011-R6b-SM-5L3F7 50-59 years, male 74.3
GTEX-1I1HK-0011-R6b-SM-CM2T9 60-69 years, male 74.3
GTEX-1GZHY-0011-R6a-SM-9OSWL 50-59 years, female 73.7
GTEX-N7MT-0011-R6a-SM-2I3G3 60-69 years, female 73.6
GTEX-QDT8-0011-R6A-SM-32PKI 30-39 years, female 71.6
GTEX-NL4W-0011-R6a-SM-2I3GA 50-59 years, male 71.5
GTEX-X261-0011-R6B-SM-4E3J8 50-59 years, male 71.3
GTEX-P44H-0011-R6A-SM-2XCF3 40-49 years, male 71.2
GTEX-ZE7O-0011-R6a-SM-57WCI 50-59 years, female 70.7
GTEX-1445S-0011-R6b-SM-5PNUF 60-69 years, male 70.6
GTEX-13JVG-0011-R6a-SM-5MR3E 60-69 years, male 70.1
GTEX-X4EP-0011-R6A-SM-3P629 60-69 years, female 69.9
GTEX-YFC4-0011-R6b-SM-4V6E1 40-49 years, female 69.3
GTEX-13JUV-0011-R6b-SM-5LZYG 40-49 years, female 69.0
GTEX-13OVJ-0011-R6b-SM-5L3GH 50-59 years, female 68.5
GTEX-1F48J-0011-R6a-SM-CJI2F 50-59 years, female 68.0
GTEX-15EO6-0011-R6a-SM-7KULK 50-59 years, male 67.0
GTEX-13PL6-0011-R6a-SM-5O9C5 40-49 years, female 66.9
GTEX-ZF28-0011-R6a-SM-4WKHI 60-69 years, male 66.1
GTEX-1H4P4-0011-R6a-SM-ARZLR 50-59 years, male 65.8
GTEX-13OW8-0011-R6b-SM-5L3I3 60-69 years, male 65.5
GTEX-1A8G6-0011-R6b-SM-7P8PE 60-69 years, male 65.1
GTEX-ZVT3-0011-R6a-SM-51MSU 60-69 years, female 65.0
GTEX-1R46S-0011-R6a-SM-EZ6N6 60-69 years, female 65.0
GTEX-1LB8K-0011-R6a-SM-EXURT 50-59 years, male 64.9
GTEX-1CB4J-0011-R6b-SM-9WG7B 60-69 years, male 64.7
GTEX-ZAB4-0011-R6a-SM-4SOKD 40-49 years, male 63.4
GTEX-PWO3-0011-R6A-SM-2I5F3 60-69 years, female 63.2
GTEX-139TS-0011-R6a-SM-5J2OB 60-69 years, male 63.0
GTEX-13OVH-0011-R6b-SM-5LUAX 70-79 years, male 63.0
GTEX-1C64N-0011-R6a-SM-7IGO9 50-59 years, male 62.4
GTEX-1IKOH-0011-R6b-SM-A9G1W 60-69 years, female 61.8
GTEX-ZUA1-0011-R6b-SM-4YCDD 40-49 years, male 61.1
GTEX-12584-0011-R6a-SM-5NQ7C 40-49 years, male 60.9
GTEX-14PHW-0011-R6b-SM-5YYAR 60-69 years, female 60.9
GTEX-X4XY-0011-R6B-SM-46MVB 60-69 years, male 60.7
GTEX-1RLM8-0011-R6a-SM-EYYXS 50-59 years, male 59.8
GTEX-1HBPM-0011-R6b-SM-ARU73 60-69 years, female 58.7
GTEX-15G19-0011-R6b-SM-7KUM3 60-69 years, male 58.1
GTEX-13IVO-0011-R6b-SM-5K7X9 70-79 years, male 57.9
GTEX-1EN7A-0011-R6b-SM-9QEHW 40-49 years, male 56.5
GTEX-16Z82-0011-R6a-SM-7IGLV 60-69 years, male 56.3
GTEX-131XW-0011-R6b-SM-5K7XY 50-59 years, female 56.1
GTEX-1IL2U-0011-R6a-SM-ARZLG 60-69 years, male 55.3
GTEX-1H3VE-0011-R6b-SM-A9G1M 40-49 years, male 54.7
GTEX-1E2YA-0011-R6b-SM-CE6R2 50-59 years, male 54.2
GTEX-1H23P-0011-R6b-SM-A9G1H 60-69 years, male 53.5
GTEX-1F75B-0011-R6a-SM-ARZMI 50-59 years, male 53.3
GTEX-1EWIQ-0011-R6a-SM-ARU8G 70-79 years, female 52.5
GTEX-S7PM-0011-R6A-SM-3NM8F 60-69 years, male 50.5
GTEX-1HFI6-0011-R6b-SM-CM2SR 40-49 years, male 48.7
GTEX-13PDP-0011-R6b-SM-5O9D5 60-69 years, male 40.8
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Brain - Putamen (basal ganglia)
Average nTPM: 80.9
Samples: 205

Max nTPM: 155.7
Min nTPM: 41.2
Std nTPM: 24.5
Median nTPM: 77.1
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 155.7
GTEX-S7SE-0011-R7A-SM-2XCDI 50-59 years, male 154.6
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 149.5
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 141.2
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 140.9
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 135.2
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 132.7
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 131.4
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 129.7
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 128.4
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 127.8
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 120.9
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 119.8
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 119.1
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 118.5
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 118.5
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 117.6
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 116.7
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 115.2
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 115.0
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 114.6
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 113.3
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 113.0
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 110.9
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 110.8
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 110.7
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 109.7
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 107.6
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 107.1
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 105.9
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 105.7
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 105.7
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 105.3
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 105.1
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 104.9
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 104.8
GTEX-RU72-0011-R7A-SM-2TF5U 50-59 years, female 104.7
GTEX-QVJO-0011-R7A-SM-2S1QO 60-69 years, female 104.1
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 104.0
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 103.8
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 103.8
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 102.7
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 102.6
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 102.1
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 100.9
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 100.8
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 99.9
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 99.7
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 98.9
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 98.4
GTEX-TSE9-0011-R7A-SM-3DB7P 60-69 years, female 98.1
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 97.6
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 97.3
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 97.2
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 97.2
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 97.1
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 96.8
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 96.6
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 96.6
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 95.2
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 95.0
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 94.4
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 94.1
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 93.4
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 93.4
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 93.4
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 93.0
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 92.6
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 91.8
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 91.3
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 91.0
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 90.8
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 90.1
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 89.7
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 89.2
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 88.7
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 88.0
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 86.1
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 84.6
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 84.6
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 84.0
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 84.0
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 83.9
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 83.4
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 83.2
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 83.0
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 82.6
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 82.6
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 82.4
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 81.3
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 80.6
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 80.6
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 80.2
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 79.9
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 79.4
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 79.2
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 79.1
GTEX-1IOXB-0011-R7b-SM-CE6SM 50-59 years, male 78.5
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 78.4
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 77.9
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 77.6
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 77.4
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 77.1
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 76.4
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 75.5
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 75.1
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 74.7
GTEX-P44G-0011-R7A-SM-2I3F9 30-39 years, male 74.7
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 74.4
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 74.1
GTEX-R55E-0011-R7A-SM-2TC5Z 20-29 years, male 74.1
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 73.2
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 73.1
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 72.9
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 72.8
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 72.8
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 72.4
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 72.2
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 71.4
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 71.3
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 70.8
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 70.8
GTEX-N7MS-0011-R7a-SM-2HMKN 60-69 years, male 70.5
GTEX-1J1OQ-0011-R7b-SM-ARU87 40-49 years, female 70.2
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 69.9
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 69.6
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 69.2
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 68.9
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 68.6
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 67.6
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 67.4
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 67.3
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 67.0
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 66.7
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 66.5
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 66.4
GTEX-OHPN-0011-R7A-SM-2I5FI 60-69 years, female 66.0
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 66.0
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 65.0
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 64.9
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 64.9
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 64.7
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 64.3
GTEX-18464-0011-R7b-SM-731CM 50-59 years, male 64.1
GTEX-NL3H-0011-R7a-SM-2I3G5 60-69 years, male 63.3
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 63.1
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 62.8
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 62.8
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 62.5
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 62.1
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 61.8
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 61.5
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 61.5
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 61.2
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 60.9
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 60.0
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 60.0
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 59.9
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 59.8
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 59.4
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 58.3
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 58.1
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 57.8
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 57.8
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 57.1
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 57.1
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 56.9
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 56.7
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 56.6
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 56.6
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 56.3
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 56.0
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 56.0
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 55.9
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 55.8
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 55.1
GTEX-NPJ8-0011-R7a-SM-2HMJV 40-49 years, male 54.5
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 54.1
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 53.3
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 53.3
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 53.2
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 52.7
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 52.0
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 51.2
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 51.2
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 51.1
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 51.0
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 51.0
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 50.8
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 50.7
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 50.5
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 49.9
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 49.6
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 49.1
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 48.5
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 47.6
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 47.5
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 47.2
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 46.9
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 46.1
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 45.2
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 44.8
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 44.6
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 44.3
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 41.2
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BASAL GANGLIA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

207.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 141.7
FF:10164-103B2 76 years, female 141.7
Nucleus accumbens
Scaled Tags Per Million: 128.6
FF:10037-101F1 23-56 years, mixed 128.6
Putamen
Scaled Tags Per Million: 207.7
FF:10176-103C5 60 years, female 207.7
Globus pallidus
Scaled Tags Per Million: 85.0
FF:10175-103C4 60 years, female 110.6
FF:10161-103A8 76 years, female 59.3

BASAL GANGLIA - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

29.1
Pig sample Sample description nTPM
Caudate
nTPM: 26.2
Samples: 4

Max nTPM: 28.6
Min nTPM: 24.5
Sample A Female 28.6
Sample B Female 24.6
Sample C Male 27.1
Sample D Male 24.5
Putamen
nTPM: 29.1
Samples: 4

Max nTPM: 41.6
Min nTPM: 21.2
Sample A Female 21.2
Sample B Female 28.1
Sample C Male 41.6
Sample D Male 25.3
Septum
nTPM: 25.4
Samples: 4

Max nTPM: 29.5
Min nTPM: 23.4
Sample A Female 29.5
Sample B Female 24.7
Sample C Male 23.8
Sample D Male 23.4
Ventral pallidum
nTPM: 24.2
Samples: 4

Max nTPM: 29.0
Min nTPM: 20.8
Sample A Female 29.0
Sample B Female 25.8
Sample C Male 20.8
Sample D Male 21.2

BASAL GANGLIA - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

92.0
Mouse sample Sample description nTPM
Caudate putamen
nTPM: 92.0
Samples: 4

Max nTPM: 96.7
Min nTPM: 88.2
Sample A Male 92.3
Sample B Male 90.6
Sample C Female 96.7
Sample D Female 88.2
Septum
nTPM: 87.4
Samples: 4

Max nTPM: 90.0
Min nTPM: 85.6
Sample A Male 85.6
Sample B Male 88.2
Sample C Female 85.7
Sample D Female 90.0
Ventral forebrain
nTPM: 87.0
Samples: 4

Max nTPM: 91.2
Min nTPM: 79.5
Sample A Male 91.2
Sample B Male 88.4
Sample C Female 79.5
Sample D Female 88.8

BASAL GANGLIA - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

11.2
Allen experiment id Experiment description Expression energy
Striatum
Expression energy: 11.2
76081944 Antisense, RP_060626_01_B04, Mouse strain C57BL/6J (56 days, male) 11.2
Pallidum
Expression energy: 9.5
76081944 Antisense, RP_060626_01_B04, Mouse strain C57BL/6J (56 days, male) 9.5

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