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TISSUE PRIMARY DATA VAGINA Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM
ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MIDBRAIN NASOPHARYNX
ORAL MUCOSA OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE
SMOOTH MUSCLE SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
ANTIBODIES
AND
VALIDATION
Dictionary
Vagina
Tissue proteome
Vagina
VAGINA - Expression summary
Protein expression
Vaginai

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Squamous epithelial cells: Not detected
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:478.0 nTPM
GTEx:478.0 nTPM
FANTOM5:2055.5 Scaled Tags Per Million

VAGINA - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA002196Antibody CAB020668
Squamous epithelial cells LowNot detected




VAGINA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

478.0
GTEx sample id Sample description nTPM
Vagina
Average nTPM: 478.0
Samples: 156

Max nTPM: 1480.3
Min nTPM: 92.3
Std nTPM: 262.2
Median nTPM: 417.1
GTEX-1I4MK-1726-SM-ARL7O 50-59 years, female 1480.3
GTEX-12WSD-2926-SM-5LZUH 60-69 years, female 1304.4
GTEX-1MCC2-1126-SM-EVYD6 30-39 years, female 1263.2
GTEX-ZQG8-1126-SM-51MRL 60-69 years, female 1175.1
GTEX-WEY5-0826-SM-4LMIH 40-49 years, female 1138.5
GTEX-RU1J-1426-SM-46MUV 20-29 years, female 1100.3
GTEX-Y114-1926-SM-4TT8J 50-59 years, female 1024.1
GTEX-1QPFJ-1626-SM-DTX7X 30-39 years, female 1009.3
GTEX-11GSP-2226-SM-5HL5Q 60-69 years, female 966.8
GTEX-UJHI-1326-SM-4IHJO 50-59 years, female 956.4
GTEX-14DAQ-2326-SM-5S2QX 60-69 years, female 874.4
GTEX-13W3W-2326-SM-5LU4Y 60-69 years, female 866.1
GTEX-12ZZX-1926-SM-5EGKC 40-49 years, female 861.7
GTEX-147F3-1526-SM-5SIAK 50-59 years, female 832.3
GTEX-1IE54-2626-SM-CMKFY 40-49 years, female 797.6
GTEX-146FR-2426-SM-5NQAU 60-69 years, female 785.7
GTEX-1I1GT-1226-SM-B2LVK 60-69 years, female 783.3
GTEX-S4UY-1326-SM-4AD4X 40-49 years, female 778.8
GTEX-ZV6S-1326-SM-59HJA 40-49 years, female 773.4
GTEX-TSE9-2526-SM-4DXUS 60-69 years, female 766.4
GTEX-W5WG-1026-SM-4LMIF 50-59 years, female 752.3
GTEX-1EWIQ-2326-SM-7IGNF 70-79 years, female 739.9
GTEX-11EM3-1826-SM-5A5KO 20-29 years, female 739.6
GTEX-X8HC-2826-SM-46MWJ 50-59 years, female 716.0
GTEX-13QIC-1826-SM-5J1MY 60-69 years, female 714.0
GTEX-OHPN-2426-SM-E9TI5 60-69 years, female 707.6
GTEX-145LS-2526-SM-5TDC9 60-69 years, female 704.7
GTEX-131YS-2426-SM-5J2OD 60-69 years, female 700.7
GTEX-1S5ZU-2626-SM-E9TII 20-29 years, female 697.8
GTEX-14PJM-2926-SM-69LOE 50-59 years, female 691.0
GTEX-12WSJ-1326-SM-5GCOB 40-49 years, female 685.4
GTEX-15UF6-2126-SM-6M46Z 70-79 years, female 681.2
GTEX-17JCI-2526-SM-7DHLB 60-69 years, female 676.7
GTEX-PWCY-1726-SM-48TD3 20-29 years, female 675.0
GTEX-1HFI7-1126-SM-A96S5 50-59 years, female 673.2
GTEX-OHPL-2526-SM-3MJGT 60-69 years, female 658.3
GTEX-PX3G-2526-SM-48TZV 20-29 years, female 656.6
GTEX-15DYW-2926-SM-6PANA 60-69 years, female 651.1
GTEX-183WM-2126-SM-7LG4I 70-79 years, female 649.1
GTEX-ZYY3-2626-SM-5N9DH 60-69 years, female 646.5
GTEX-QDT8-2526-SM-48TYX 30-39 years, female 644.8
GTEX-ZAK1-2426-SM-EXOHM 50-59 years, female 628.4
GTEX-1LH75-1726-SM-DHXKZ 50-59 years, female 625.7
GTEX-1HCU8-2026-SM-9YFLE 60-69 years, female 607.4
GTEX-P4PP-2526-SM-3P61P 30-39 years, female 600.6
GTEX-1PIEJ-1926-SM-EVYB7 20-29 years, female 595.2
GTEX-YJ8O-1226-SM-5P9JE 40-49 years, female 593.0
GTEX-NPJ7-2526-SM-EV79A 60-69 years, female 578.4
GTEX-XV7Q-1626-SM-4BRWC 40-49 years, female 577.4
GTEX-18A7A-2826-SM-7LT8J 50-59 years, female 577.0
GTEX-1JN1M-2326-SM-ARZNG 60-69 years, female 570.4
GTEX-ZGAY-2226-SM-4YCCX 40-49 years, female 569.7
GTEX-WRHU-2926-SM-4MVNQ 50-59 years, female 565.5
GTEX-1GMR8-2526-SM-7RHI9 50-59 years, female 545.3
GTEX-ZE7O-2426-SM-57WD7 50-59 years, female 533.8
GTEX-13OVI-0926-SM-5J1MI 60-69 years, female 531.4
GTEX-11DXX-1726-SM-5H11T 60-69 years, female 524.1
GTEX-1LGRB-2126-SM-COH48 50-59 years, female 523.0
GTEX-TMMY-1926-SM-4DXUU 40-49 years, female 520.8
GTEX-ZYVF-0326-SM-5GIES 50-59 years, female 516.5
GTEX-PLZ4-2726-SM-3P61A 50-59 years, female 503.4
GTEX-13D11-1326-SM-5IJFY 50-59 years, female 496.0
GTEX-1F48J-2526-SM-7P8TU 50-59 years, female 496.0
GTEX-16NPV-2526-SM-6M483 50-59 years, female 491.6
GTEX-T2IS-1926-SM-4DM74 20-29 years, female 491.0
GTEX-14BMU-1926-SM-5S2QC 20-29 years, female 485.1
GTEX-ZVT3-2726-SM-5GU5X 60-69 years, female 479.0
GTEX-13QBU-1726-SM-5IJFQ 40-49 years, female 469.5
GTEX-XUW1-0326-SM-4BOOR 50-59 years, female 467.0
GTEX-QCQG-1226-SM-48U23 50-59 years, female 464.2
GTEX-14A5I-2726-SM-5SIB3 50-59 years, female 462.8
GTEX-13PVR-1426-SM-5S2PW 60-69 years, female 447.8
GTEX-1ICG6-1626-SM-ARL81 70-79 years, female 447.5
GTEX-13N11-1526-SM-5L3FL 50-59 years, female 446.3
GTEX-145ME-1426-SM-5RQJS 40-49 years, female 438.4
GTEX-1GN1U-2426-SM-9KNTU 50-59 years, female 435.7
GTEX-13U4I-2026-SM-5LU3L 40-49 years, female 423.2
GTEX-1C475-0526-SM-793AC 40-49 years, female 422.0
GTEX-1QCLZ-2226-SM-DTX7R 60-69 years, female 412.2
GTEX-P78B-2226-SM-3P5ZZ 40-49 years, female 405.3
GTEX-15ER7-2526-SM-7KUFW 20-29 years, female 403.0
GTEX-TML8-1126-SM-4DXSS 40-49 years, female 399.9
GTEX-1AMFI-1526-SM-73KVY 50-59 years, female 397.5
GTEX-ZTPG-2226-SM-57WF9 20-29 years, female 395.6
GTEX-15SHU-2926-SM-7KUKT 40-49 years, female 385.7
GTEX-WYVS-1426-SM-4ONCV 40-49 years, female 382.8
GTEX-PWN1-2526-SM-48TDS 40-49 years, female 374.0
GTEX-1HCU6-2326-SM-ACKXP 60-69 years, female 372.4
GTEX-N7MT-1926-SM-3LK5N 60-69 years, female 367.9
GTEX-1GN1W-1526-SM-7P8TG 50-59 years, female 367.5
GTEX-X15G-1926-SM-4PQZQ 50-59 years, female 359.0
GTEX-17F9Y-2326-SM-7DUFP 70-79 years, female 352.7
GTEX-113JC-1926-SM-5N9GE 50-59 years, female 352.2
GTEX-XUZC-1226-SM-4BRVJ 30-39 years, female 352.0
GTEX-RWS6-1726-SM-47JXP 60-69 years, female 350.4
GTEX-1HCUA-1026-SM-A9SMI 50-59 years, female 349.2
GTEX-YFC4-2926-SM-5IFJ8 40-49 years, female 346.2
GTEX-1LNCM-1026-SM-E9U5D 50-59 years, female 345.5
GTEX-1399U-1526-SM-5J2N7 50-59 years, female 344.2
GTEX-1A8FM-2426-SM-7IGPE 50-59 years, female 341.2
GTEX-11EMC-1926-SM-5A5JU 60-69 years, female 339.9
GTEX-146FH-2626-SM-5Q5E1 50-59 years, female 338.6
GTEX-1HBPH-2926-SM-9WPNX 40-49 years, female 335.1
GTEX-11VI4-0726-SM-5GU5B 40-49 years, female 333.4
GTEX-14H4A-2426-SM-664OQ 40-49 years, female 325.5
GTEX-1399S-2326-SM-5K7YV 30-39 years, female 325.0
GTEX-Y3IK-2226-SM-4YCD4 50-59 years, female 325.0
GTEX-1HBPM-2726-SM-9WYUA 60-69 years, female 324.7
GTEX-ZP4G-0826-SM-4WWF3 20-29 years, female 322.1
GTEX-1JMQL-2326-SM-CNNPV 50-59 years, female 317.6
GTEX-U3ZN-0926-SM-4DXTU 30-39 years, female 312.2
GTEX-131XG-2126-SM-5DUXG 50-59 years, female 308.3
GTEX-1NUQO-1826-SM-E6CQU 20-29 years, female 307.1
GTEX-14PJ6-1626-SM-6872D 60-69 years, female 303.8
GTEX-S7SF-1426-SM-4AT5A 20-29 years, female 296.6
GTEX-OHPK-2526-SM-3MJH9 50-59 years, female 289.1
GTEX-Y8LW-1426-SM-5RQJJ 50-59 years, female 287.7
GTEX-1R9JW-1426-SM-DTX9K 30-39 years, female 283.5
GTEX-1LGOU-1126-SM-D3LAI 20-29 years, female 282.7
GTEX-1F5PL-1826-SM-7P8PP 40-49 years, female 279.3
GTEX-ZLWG-1126-SM-4WWFQ 50-59 years, female 278.9
GTEX-15SB6-1426-SM-7KUEM 50-59 years, female 277.1
GTEX-14JG6-0726-SM-69LQH 30-39 years, female 269.3
GTEX-QVJO-2526-SM-CYPRA 60-69 years, female 262.8
GTEX-ZVT2-0626-SM-5GICR 50-59 years, female 257.8
GTEX-1QP28-1426-SM-EVR4E 50-59 years, female 250.6
GTEX-T6MO-1226-SM-4DM5S 40-49 years, female 250.3
GTEX-18D9A-1026-SM-7KFRU 30-39 years, female 242.8
GTEX-14PN3-1626-SM-6AJAV 60-69 years, female 233.9
GTEX-SN8G-2626-SM-EXUQT 50-59 years, female 231.7
GTEX-ZC5H-2226-SM-4WAWS 40-49 years, female 230.0
GTEX-1117F-2526-SM-5GZY6 60-69 years, female 219.9
GTEX-1J1OQ-1826-SM-CL53R 40-49 years, female 216.6
GTEX-11P81-2126-SM-5HL6N 30-39 years, female 211.7
GTEX-Q734-1426-SM-DTXFX 40-49 years, female 207.9
GTEX-1LVAM-1926-SM-E6CIM 50-59 years, female 204.6
GTEX-S4P3-1126-SM-4AD52 50-59 years, female 202.8
GTEX-SE5C-1126-SM-4BRWZ 40-49 years, female 191.9
GTEX-13PL7-2726-SM-5L3GB 60-69 years, female 189.1
GTEX-14PKU-1326-SM-6871B 40-49 years, female 188.3
GTEX-1JN76-1526-SM-CNPPF 20-29 years, female 183.1
GTEX-11XUK-1326-SM-5EQM4 40-49 years, female 177.2
GTEX-1MCYP-1326-SM-EV7AD 20-29 years, female 177.0
GTEX-11I78-2026-SM-5987C 50-59 years, female 174.6
GTEX-1CAMS-2326-SM-793CR 40-49 years, female 170.9
GTEX-11TTK-2726-SM-5GU58 60-69 years, female 162.5
GTEX-S341-1226-SM-4AD5S 40-49 years, female 158.6
GTEX-1GF9U-1926-SM-7P8TZ 40-49 years, female 155.9
GTEX-1J8EW-2526-SM-CKZO2 60-69 years, female 155.3
GTEX-15SDE-1726-SM-6LPJS 50-59 years, female 154.0
GTEX-1IDJU-1026-SM-AHZ2U 60-69 years, female 150.9
GTEX-1LVAN-1626-SM-CNPQ7 50-59 years, female 136.5
GTEX-16NGA-1626-SM-72D6M 40-49 years, female 133.4
GTEX-ZXES-0626-SM-5E45P 30-39 years, female 120.6
GTEX-14AS3-1726-SM-5RQJV 40-49 years, female 102.5
GTEX-ZZPU-2226-SM-5EGIV 50-59 years, female 92.3
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VAGINA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

2055.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Vagina
Scaled Tags Per Million: 2055.5
FF:10204-103F6 68 years, female 2055.5

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