PONS AND MEDULLA - Expression summary
Protein expressioni No data
RNA expressioni
HPA Brain:297.2 nTPM
FANTOM5:390.5 Scaled Tags Per Million
Pig:190.9 nTPM
Mouse:91.1 nTPM
Allen mouse:3.4 Expression energy

PONS AND MEDULLA - Annotated protein expression
Pending normal tissue analysis

PONS AND MEDULLA - HPA Brain RNA-seq
Max subtype nTPMi 297.2
Sample id Sample description nTPM
Anterior cochlear nucleus, ventral
nTPM: 242.5
2188 Female, age 91, both hemispheres 293.0
2090 Male, age 80, both hemispheres 240.5
1984 Male, age 76, both hemispheres 222.8
2301 Female, age 85, both hemispheres 213.8
Area postrema
nTPM: 169.5
2306 Male, age 80, both hemispheres 214.1
2054 Male, age 76, both hemispheres 172.3
2799 Male, age 61, both hemispheres 122.0
Dorsal cochlear nucleus
nTPM: 205.7
2187 Female, age 91, both hemispheres 246.9
2058 Male, age 76, both hemispheres 217.4
2378 Male, age 80, both hemispheres 200.4
2802 Male, age 74, right hemisphere 190.6
2370 Male, age 61, both hemispheres 173.2
Dorsal medullary reticular nucleus
nTPM: 234.1
2040 Female, age 85, both hemispheres 294.6
2088 Male, age 76, both hemispheres 214.2
2373 Male, age 61, both hemispheres 193.6
Dorsal motor vagal complex
nTPM: 190.2
2000 Male, age 74, unknown 250.0
2133 Female, age 91, both hemispheres 237.1
2844 Male, age 55, unknown 207.4
2185 Male, age 76, both hemispheres 202.1
2813 Female, age 72, unknown 180.0
2807 Female, age 85, both hemispheres 169.6
2643 Male, age 74, both hemispheres 157.3
2797 Male, age 61, both hemispheres 118.4
Dorsal tegmental nucleus
nTPM: 196.9
2083 Male, age 80, both hemispheres 252.7
2326 Male, age 74, both hemispheres 211.4
1936 Male, age 76, left hemisphere 197.6
2358 Male, age 61, both hemispheres 125.8
Dorsolateral tegmental area
nTPM: 213.5
2751 Female, age 85, both hemispheres 282.2
2654 Male, age 80, both hemispheres 244.6
2360 Male, age 74, both hemispheres 203.8
2141 Male, age 76, both hemispheres 182.6
2337 Male, age 61, both hemispheres 154.2
Gigantocellular reticular nuclei, medullary
nTPM: 252.1
2387 Female, age 91, both hemispheres 283.1
1876 Female, age 85, both hemispheres 279.5
2022 Male, age 76, right hemisphere 260.0
2314 Male, age 61, both hemispheres 249.1
2462 Male, age 74, both hemispheres 231.2
2310 Male, age 80, both hemispheres 210.0
Gigantocellular reticular nuclei, pars
nTPM: 222.8
2168 Male, age 76, both hemispheres 261.8
2084 Female, age 85, both hemispheres 237.5
2336 Male, age 61, both hemispheres 229.0
2706 Male, age 80, both hemispheres 199.8
2330 Male, age 80, both hemispheres 185.9
Inferior olive
nTPM: 225.1
2563 Male, age 74, both hemispheres 248.4
2178 Male, age 61, both hemispheres 239.1
2085 Female, age 85, both hemispheres 231.9
2628 Female, age 91, both hemispheres 219.7
2379 Male, age 80, both hemispheres 186.1
Kolliker-Fuse nucleus
nTPM: 233.7
2793 Female, age 91, left hemisphere 271.1
2163 Male, age 80, both hemispheres 257.2
2315 Male, age 76, right hemisphere 172.8
Lateral lemniscal nuclei
nTPM: 269.6
2746 Female, age 85, left hemisphere 277.9
2169 Male, age 76, both hemispheres 276.7
2036 Male, age 80, both hemispheres 274.0
2320 Female, age 91, left hemisphere 260.1
2453 Male, age 74, right hemisphere 259.6
Lateral medullary reticular nucleus
nTPM: 247.6
2305 Male, age 74, both hemispheres 315.4
2044 Male, age 76, both hemispheres 263.9
2852 Male, age 80, both hemispheres 245.1
2190 Female, age 85, both hemispheres 233.9
2374 Male, age 61, both hemispheres 216.4
2804 Female, age 91, both hemispheres 210.8
Lateral parabrachial nucleus
nTPM: 230.7
2139 Female, age 85, right hemisphere 255.0
2013 Male, age 80, both hemispheres 248.8
2792 Male, age 76, both hemispheres 237.2
2790 Male, age 61, both hemispheres 181.8
Lateral vestibular nucleus
nTPM: 221.5
2184 Male, age 76, both hemispheres 240.0
2311 Male, age 80, both hemispheres 203.1
Locus coeruleus
nTPM: 207.1
2014 Male, age 55, unknown 253.9
2162 Male, age 80, both hemispheres 213.6
2788 Male, age 74, unknown 213.0
2720 Male, age 74, both hemispheres 201.5
2317 Female, age 72, unknown 199.4
2123 Female, age 91, both hemispheres 198.5
1980 Male, age 76, both hemispheres 170.2
Medial olivary nucleus
nTPM: 246.9
1943 Male, age 61, both hemispheres 280.4
2138 Female, age 91, both hemispheres 254.3
1962 Male, age 76, both hemispheres 251.4
2851 Male, age 80, both hemispheres 201.4
Medial parabrachial nucleus
nTPM: 238.3
2463 Female, age 85, right hemisphere 289.6
2170 Female, age 91, both hemispheres 257.7
2854 Male, age 80, both hemispheres 227.4
2786 Male, age 76, both hemispheres 221.2
2156 Male, age 61, both hemispheres 195.6
Medial periolivary nuclei
nTPM: 263.4
2791 Male, age 74, right hemisphere 280.4
2063 Male, age 76, both hemispheres 280.1
2171 Female, age 85, both hemispheres 259.5
2458 Female, age 91, both hemispheres 253.1
2081 Male, age 80, both hemispheres 244.0
Medial vestibular nucleus
nTPM: 237.7
2803 Female, age 91, both hemispheres 283.4
2801 Male, age 74, both hemispheres 260.1
2093 Male, age 80, both hemispheres 254.3
2743 Female, age 85, both hemispheres 224.7
2624 Male, age 61, both hemispheres 206.9
2134 Male, age 76, both hemispheres 196.5
Motor facial nucleus
nTPM: 248.2
2365 Male, age 74, right hemisphere 294.7
2062 Male, age 76, both hemispheres 281.1
2697 Female, age 85, both hemispheres 257.9
2126 Male, age 61, both hemispheres 243.0
2327 Male, age 80, both hemispheres 209.5
2795 Female, age 91, both hemispheres 202.7
Motor hypoglossal nucleus
nTPM: 229.4
2125 Female, age 91, both hemispheres 292.2
2132 Female, age 85, both hemispheres 276.0
2182 Male, age 80, both hemispheres 228.8
2461 Male, age 61, both hemispheres 202.0
2277 Male, age 76, both hemispheres 148.2
Motor trigeminal nucleus
nTPM: 230.5
2560 Male, age 74, both hemispheres 272.8
2079 Male, age 80, both hemispheres 237.9
2321 Female, age 91, both hemispheres 236.1
2309 Male, age 76, both hemispheres 223.4
2335 Male, age 61, both hemispheres 182.5
Nuclei of the trapezoid body
nTPM: 264.9
2159 Male, age 61, both hemispheres 311.0
2735 Female, age 85, both hemispheres 259.1
2368 Female, age 91, both hemispheres 252.3
2166 Male, age 80, both hemispheres 251.0
1983 Male, age 76, both hemispheres 250.9
Nucleus ambiguus
nTPM: 229.9
2071 Male, age 76, both hemispheres 254.1
2096 Female, age 85, both hemispheres 205.8
Nucleus cuneatus
nTPM: 208.9
2380 Male, age 80, both hemispheres 235.7
2381 Male, age 80, both hemispheres 228.9
2100 Male, age 76, both hemispheres 226.1
2376 Male, age 61, both hemispheres 216.9
2808 Female, age 85, both hemispheres 213.6
2131 Male, age 76, both hemispheres 212.9
2564 Male, age 74, both hemispheres 207.8
2562 Male, age 61, both hemispheres 172.2
2805 Female, age 91, both hemispheres 166.4
Nucleus gracilis
nTPM: 227.7
2382 Male, age 80, both hemispheres 262.1
2627 Male, age 74, both hemispheres 232.6
2299 Female, age 85, both hemispheres 188.5
Nucleus raphe magnus
nTPM: 259.7
2160 Male, age 61, both hemispheres 297.2
2455 Male, age 74, both hemispheres 289.5
2459 Female, age 91, both hemispheres 266.4
2172 Female, age 85, both hemispheres 238.9
2328 Male, age 80, both hemispheres 235.9
2051 Male, age 76, both hemispheres 230.4
Nucleus raphe obscurus
nTPM: 255.1
2845 Female, age 85, midline 277.6
2800 Male, age 61, midline 253.2
2142 Male, age 76, midline 234.6
Nucleus raphe pallidus
nTPM: 233.6
1924 Male, age 61, midline 249.1
2183 Male, age 80, midline 234.6
2145 Male, age 76, midline 217.2
Nucleus tractus solitarii
nTPM: 176.0
2144 Female, age 91, right hemisphere 220.4
2656 Male, age 76, both hemispheres 198.7
2191 Female, age 85, both hemispheres 151.2
2307 Male, age 80, both hemispheres 133.6
Paramedian reticular nucleus
nTPM: 261.8
2050 Female, age 85, both hemispheres 300.2
2057 Male, age 80, both hemispheres 256.0
2052 Male, age 76, both hemispheres 249.0
2313 Male, age 61, both hemispheres 242.1
Parvicellular reticular nuclei
nTPM: 237.6
2095 Male, age 76, both hemispheres 253.0
2119 Male, age 80, both hemispheres 236.2
2558 Male, age 74, both hemispheres 223.6
Parvicellular reticular nuclei, medullary
nTPM: 243.4
2189 Female, age 91, both hemispheres 259.7
2091 Female, age 85, both hemispheres 246.6
2181 Male, age 80, left hemisphere 223.9
Pedunculopontine tegmental nucleus
nTPM: 223.3
1921 Female, age 85, both hemispheres 248.2
2334 Male, age 80, both hemispheres 217.0
2338 Male, age 61, both hemispheres 204.7
Peritrigeminal nucleus
nTPM: 240.6
2179 Male, age 61, both hemispheres 252.9
2067 Female, age 85, both hemispheres 236.9
2136 Male, age 76, both hemispheres 231.9
Pontine nuclei
nTPM: 292.9
2454 Male, age 74, left hemisphere 374.8
2727 Male, age 61, right hemisphere 319.5
1863 Male, age 55, unknown 303.3
2109 Female, age 72, unknown 293.6
2787 Female, age 85, both hemispheres 288.8
2319 Female, age 91, both hemispheres 283.0
1968 Male, age 76, left hemisphere 269.6
2115 Male, age 80, left hemisphere 210.4
Pontine raphe nucleus
nTPM: 240.2
2122 Female, age 85, midline 268.1
2853 Male, age 76, midline 212.4
Posteroventral cochlear nucleus
nTPM: 251.6
2135 Female, age 91, both hemispheres 298.7
2070 Male, age 76, both hemispheres 263.1
2752 Female, age 85, both hemispheres 249.9
2341 Male, age 80, both hemispheres 248.1
2371 Male, age 61, both hemispheres 198.5
Prepositus hypoglossal nucleus
nTPM: 220.8
2855 Female, age 85, right hemisphere 255.0
2086 Male, age 80, both hemispheres 186.7
Principal sensory trigeminal nucleus
nTPM: 258.3
2367 Female, age 91, left hemisphere 280.0
2158 Male, age 61, both hemispheres 277.0
2008 Male, age 80, left hemisphere 257.3
2324 Male, age 76, both hemispheres 218.8
Reticular pontine nucleus, caudal
nTPM: 262.4
2559 Male, age 74, both hemispheres 295.2
2457 Female, age 91, both hemispheres 278.9
2092 Male, age 76, both hemispheres 263.4
2332 Male, age 80, right hemisphere 212.0
Reticular pontine nucleus, oral
nTPM: 297.2
2361 Male, age 74, both hemispheres 396.3
2012 Female, age 85, both hemispheres 299.9
2366 Female, age 91, both hemispheres 298.7
1939 Male, age 80, both hemispheres 248.6
2167 Male, age 76, both hemispheres 242.5
Reticulotegmental nucleus
nTPM: 211.8
2452 Male, age 74, both hemispheres 221.3
2322 Female, age 91, both hemispheres 216.2
2325 Male, age 76, both hemispheres 213.7
2333 Male, age 80, both hemispheres 195.9
Spinal trigeminal nucleus, caudal
nTPM: 233.6
2390 Female, age 91, both hemispheres 258.9
2312 Male, age 61, both hemispheres 254.7
2447 Male, age 76, both hemispheres 237.3
2308 Male, age 80, both hemispheres 216.5
2642 Male, age 74, both hemispheres 200.5
Spinal trigeminal nucleus, interpolar
nTPM: 256.4
2625 Male, age 61, both hemispheres 288.9
2066 Male, age 76, right hemisphere 251.8
2386 Female, age 85, both hemispheres 247.3
2033 Male, age 80, both hemispheres 247.0
2389 Female, age 91, both hemispheres 247.0
Spinal trigeminal nucleus, oral
nTPM: 233.6
2737 Female, age 85, both hemispheres 251.1
1978 Male, age 76, both hemispheres 231.5
2164 Male, age 80, both hemispheres 218.1
Spinal vestibular nucleus
nTPM: 248.9
2186 Female, age 91, both hemispheres 287.5
2748 Male, age 76, both hemispheres 264.8
2806 Female, age 85, both hemispheres 262.7
2384 Male, age 74, both hemispheres 245.9
2780 Male, age 80, both hemispheres 241.6
2796 Male, age 61, both hemispheres 191.0
Subcoeruleus area
nTPM: 232.3
2369 Female, age 85, left hemisphere 295.9
1958 Male, age 80, both hemispheres 243.0
2089 Male, age 76, left hemisphere 235.4
2323 Female, age 91, left hemisphere 202.4
2451 Male, age 74, both hemispheres 184.7
Superior olive
nTPM: 279.2
1875 Female, age 85, both hemispheres 315.5
2364 Male, age 74, right hemisphere 309.9
2020 Male, age 76, both hemispheres 300.3
2561 Female, age 91, both hemispheres 239.5
2329 Male, age 80, right hemisphere 230.8
Superior vestibular nucleus
nTPM: 216.0
2015 Male, age 80, both hemispheres 242.1
2383 Male, age 74, both hemispheres 218.9
2061 Male, age 76, both hemispheres 186.8
Ventral medullary reticular nucleus
nTPM: 254.2
2372 Male, age 61, both hemispheres 259.3
2060 Male, age 76, both hemispheres 249.1
Ventral periolivary nuclei
nTPM: 252.1
2023 Male, age 76, both hemispheres 305.8
2165 Male, age 80, both hemispheres 251.0
2130 Female, age 85, both hemispheres 237.7
2794 Female, age 91, left hemisphere 213.8
Ventrolateral medulla, A1-C1 cell groups
nTPM: 236.4
2180 Male, age 61, both hemispheres 251.0
2118 Male, age 80, both hemispheres 243.3
2741 Female, age 85, both hemispheres 240.6
1986 Male, age 76, both hemispheres 231.2
2302 Female, age 91, both hemispheres 215.7
Ventrolateral tegmental area, A5 NE cell group
nTPM: 247.2
2449 Male, age 74, both hemispheres 276.9
2456 Female, age 91, both hemispheres 259.7
2840 Female, age 85, both hemispheres 250.4
1959 Male, age 76, both hemispheres 243.4
2161 Male, age 80, both hemispheres 232.8
2359 Male, age 61, both hemispheres 220.1

PONS AND MEDULLA - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 390.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Locus coeruleus
Scaled Tags Per Million: 232.2
FF:10165-103B3 76 years, female 250.3
FF:10182-103D2 60 years, female 214.1
Medulla oblongata
Scaled Tags Per Million: 199.6
FF:10038-101F2 18-64 years, mixed 273.0
FF:10155-103A2 76 years, female 197.9
FF:10174-103C3 60 years, female 127.8
Pons
Scaled Tags Per Million: 390.5
FF:10033-101E6 18-54 years, mixed 390.5

PONS AND MEDULLA - Pig RNA-seqi
Max subtype nTPMi 190.9
Pig sample Sample description nTPM
Medulla oblongata
nTPM: 182.8
Samples: 4

Max nTPM: 204.0
Min nTPM: 171.6
Sample A Female 204.0
Sample B Female 171.6
Sample C Male 175.3
Sample D Male 180.2
Pons
nTPM: 191.0
Samples: 4

Max nTPM: 224.1
Min nTPM: 159.8
Sample A Female 224.1
Sample B Female 159.8
Sample C Male 189.4
Sample D Male 190.5

PONS AND MEDULLA - Mouse RNA-seqi
Max subtype nTPMi 91.1
Mouse sample Sample description nTPM
Pons and medulla
nTPM: 91.2
Samples: 4

Max nTPM: 95.2
Min nTPM: 87.3
Sample A Male 92.9
Sample B Male 89.2
Sample C Female 87.3
Sample D Female 95.2

PONS AND MEDULLA - Allen Mouse ISHi
Max subtype Expression energyi 3.4
Allen experiment id Experiment description Expression energy
Medulla oblongata
Expression energy: 3.4
71211477 Antisense, RP_050816_01_F10, Mouse strain C57BL/6J (56 days, male) 5.0
71724852 Antisense, RP_050921_01_H01, Mouse strain C57BL/6J (56 days, male) 1.7
Pons
Expression energy: 2.8
71211477 Antisense, RP_050816_01_F10, Mouse strain C57BL/6J (56 days, male) 4.2
71724852 Antisense, RP_050921_01_H01, Mouse strain C57BL/6J (56 days, male) 1.4

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