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  • RPL9
TISSUE PRIMARY DATA CAUDATE Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM
ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MIDBRAIN NASOPHARYNX
ORAL MUCOSA OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE
SMOOTH MUSCLE SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
ANTIBODIES
AND
VALIDATION
Dictionary
Caudate
Tissue proteome
CAUDATE - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glial cells: Not detected
Neuronal cells: High
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
GTEx:833.6 nTPM
FANTOM5:24.7 Scaled Tags Per Million
Pig:18.9 nTPM

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA003372
Glial cells Low
Neuronal cells High



CAUDATE - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

833.6
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 833.6
Samples: 246

Max nTPM: 2427.2
Min nTPM: 407.5
Std nTPM: 302.0
Median nTPM: 762.7
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 2427.2
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 2045.5
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 1949.2
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 1836.0
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 1649.0
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 1640.0
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 1573.7
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 1573.5
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 1552.5
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 1538.3
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 1532.1
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 1487.6
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 1482.1
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 1475.2
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 1423.4
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 1386.3
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 1319.8
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 1303.9
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 1248.1
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 1239.6
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 1228.5
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 1222.1
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 1216.6
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 1212.9
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 1204.3
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 1189.9
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 1183.1
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 1166.1
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 1149.1
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 1142.4
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 1129.3
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 1119.9
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 1109.3
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 1108.0
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 1106.3
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 1102.5
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 1100.5
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 1090.4
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 1076.3
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 1074.6
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 1070.5
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 1045.8
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 1045.3
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 1032.3
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 1026.5
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 1020.6
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 1016.6
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 1012.6
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 1006.1
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 1004.2
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 998.6
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 995.9
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 994.6
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 994.4
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 984.0
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 976.0
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 975.7
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 970.3
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 970.1
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 968.7
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 963.4
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 954.9
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 953.8
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 952.2
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 939.4
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 935.3
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 934.4
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 933.5
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 928.0
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 927.9
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 927.5
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 924.4
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 918.7
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 916.6
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 911.0
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 911.0
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 905.0
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 900.6
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 900.2
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 898.8
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 898.4
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 893.3
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 893.1
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 892.8
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 891.8
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 881.9
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 878.3
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 875.5
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 872.4
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 871.8
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 865.7
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 861.0
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 858.8
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 856.6
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 855.7
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 855.1
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 854.9
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 851.1
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 841.2
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 839.9
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 836.3
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 829.1
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 828.1
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 824.2
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 820.8
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 816.4
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 815.6
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 811.6
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 809.8
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 800.8
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 799.2
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 796.3
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 792.2
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 792.0
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 785.3
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 784.7
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 770.9
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 770.5
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 770.4
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 767.3
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 766.0
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 765.3
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 763.0
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 762.4
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 758.5
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 757.4
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 756.6
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 754.9
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 754.5
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 754.3
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 750.0
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 749.9
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 749.5
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 747.2
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 742.3
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 739.9
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 739.8
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 737.7
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 730.0
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 723.8
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 720.2
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 719.6
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 718.7
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 717.7
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 716.0
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 713.3
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 709.3
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 709.2
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 707.3
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 705.3
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 705.0
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 695.5
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 689.2
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 688.4
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 684.6
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 684.4
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 683.4
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 681.0
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 679.8
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 679.5
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 678.7
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 677.9
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 676.5
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 676.0
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 669.1
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 667.8
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 667.6
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 665.4
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 661.6
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 654.4
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 652.2
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 649.6
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 649.0
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 644.4
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 642.4
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 642.1
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 641.9
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 640.9
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 640.4
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 638.4
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 635.3
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 632.1
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 627.5
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 625.8
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 624.2
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 623.6
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 619.8
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 619.4
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 619.1
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 617.6
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 615.9
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 611.3
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 610.4
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 608.0
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 607.5
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 605.6
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 603.2
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 602.5
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 599.0
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 592.2
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 590.5
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 585.4
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 583.8
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 580.7
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 580.6
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 579.7
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 577.6
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 576.9
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 576.7
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 567.7
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 567.0
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 565.3
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 565.2
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 563.5
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 555.8
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 555.5
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 553.9
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 551.6
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 540.4
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 537.7
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 536.9
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 532.1
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 531.4
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 523.5
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 519.1
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 517.2
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 512.4
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 511.3
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 509.1
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 504.0
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 502.3
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 500.9
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 490.2
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 490.0
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 475.1
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 463.1
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 462.8
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 460.8
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 459.9
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 455.2
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 450.6
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 448.6
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 447.6
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 443.5
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 432.7
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 407.5
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CAUDATE - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

24.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 24.7
FF:10164-103B2 76 years, female 24.7

CAUDATE - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

18.9
Pig sample Sample description nTPM
Caudate
nTPM: 18.9
Samples: 4

Max nTPM: 20.7
Min nTPM: 17.2
Sample A Female 20.7
Sample B Female 17.2
Sample C Male 19.4
Sample D Male 18.1

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