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BRAIN BASAL GANGLIA Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS MEDULLA OBLONGATA
MIDBRAIN OLFACTORY BULB PITUITARY GLAND PONS RETINA SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
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VALIDATION
Brain proteome
Basal ganglia
BASAL GANGLIA - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glial cells: Medium
Neuronal cells: Not detected
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:186.8 nTPM
HPA Brain:391.8 nTPM
GTEx:186.8 nTPM
FANTOM5:394.2 Scaled Tags Per Million
Pig:195.4 nTPM
Mouse:153.0 nTPM
Allen mouse:1.5 Expression energy

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA005665Antibody HPA036534
Glial cells Not detectedMedium
Neuronal cells LowNot detected





BASAL GANGLIA - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

391.8
Sample id Sample description nTPM
Caudate nucleus
nTPM: 173.4
2288 Male, age 75, left hemisphere 213.5
2481 Female, age 94, left hemisphere 200.1
2289 Male, age 61, right hemisphere 179.7
1781 Male, age 74, unknown 172.7
2846 Female, age 79, unknown 172.1
1854 Male, age 80, left hemisphere 160.0
2290 Female, age 72, unknown 144.6
1857 Female, age 85, left hemisphere 144.4
Globus pallidus, externus
nTPM: 339.8
1996 Male, age 80, right hemisphere 380.7
2646 Male, age 61, right hemisphere 370.1
2772 Female, age 79, unknown 367.7
2567 Female, age 72, unknown 328.1
2395 Male, age 75, both hemispheres 252.3
Globus pallidus, internus
nTPM: 391.8
2111 Female, age 85, right hemisphere 540.6
2778 Female, age 91, both hemispheres 472.1
1818 Male, age 74, unknown 376.0
2566 Female, age 72, unknown 353.4
2037 Male, age 80, right hemisphere 352.4
2287 Male, age 75, right hemisphere 348.6
2483 Female, age 94, right hemisphere 299.7
Nucleus accumbens
nTPM: 206.9
2391 Female, age 94, left hemisphere 335.1
2698 Female, age 72, unknown 225.8
2732 Male, age 80, right hemisphere 225.1
2286 Male, age 75, left hemisphere 194.5
1806 Female, age 85, left hemisphere 187.0
2824 Male, age 61, right hemisphere 178.3
1783 Male, age 74, unknown 177.4
1856 Female, age 91, right hemisphere 132.3
Nucleus basalis of Meynert
nTPM: 231.8
2569 Male, age 61, both hemispheres 329.6
2821 Male, age 75, both hemispheres 227.3
2484 Female, age 94, left hemisphere 198.1
2393 Male, age 80, right hemisphere 172.1
Nucleus of the diagonal band
nTPM: 167.2
2029 Male, age 61, right hemisphere 208.3
1812 Female, age 91, both hemispheres 197.4
2195 Female, age 85, both hemispheres 151.6
2775 Male, age 80, right hemisphere 149.9
1979 Male, age 74, unknown 129.1
Putamen
nTPM: 194.5
2647 Male, age 75, left hemisphere 244.6
2482 Female, age 94, left hemisphere 226.9
1829 Male, age 74, unknown 220.5
2489 Female, age 72, unknown 201.3
1937 Female, age 91, right hemisphere 180.7
2466 Female, age 79, unknown 164.9
1838 Male, age 80, right hemisphere 122.3
Septal nuclei
nTPM: 176.5
2394 Male, age 61, left hemisphere 259.5
2629 Female, age 94, right hemisphere 176.2
2199 Male, age 80, right hemisphere 172.0
2031 Female, age 72, unknown 164.8
2059 Female, age 85, both hemispheres 164.1
1960 Male, age 74, unknown 151.0
2009 Female, age 91, both hemispheres 147.6
Stria terminalis, bed nucleus
nTPM: 156.3
1974 Female, age 91, both hemispheres 172.7
2486 Female, age 94, both hemispheres 153.8
2201 Male, age 74, unknown 142.3

BASAL GANGLIA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

186.8
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 143.7
Samples: 246

Max nTPM: 409.3
Min nTPM: 78.4
Std nTPM: 41.9
Median nTPM: 136.4
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 409.3
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 330.5
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 317.8
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 308.4
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 261.6
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 250.3
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 249.5
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 236.4
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 228.0
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 216.2
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 215.4
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 214.6
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 210.3
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 207.0
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 205.5
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 204.8
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 196.7
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 195.9
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 194.2
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 192.9
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 191.7
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 190.2
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 189.9
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 189.0
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 187.8
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 187.5
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 186.0
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 185.4
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 184.3
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 183.5
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 183.5
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 181.9
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 181.6
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 180.1
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 178.9
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 178.3
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 177.8
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 176.1
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 175.7
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 175.7
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 174.2
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 173.7
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 173.5
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 173.5
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 172.8
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 172.1
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 171.8
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 171.5
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 171.1
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 169.6
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 169.1
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 169.0
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 168.6
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 167.4
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 167.2
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 166.0
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 165.7
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 165.2
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 164.8
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 164.6
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 164.1
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 164.1
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 164.1
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 163.2
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 162.2
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 162.1
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 162.1
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 160.2
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 159.8
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 158.7
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 158.7
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 158.0
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 157.5
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 153.9
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 153.3
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 152.9
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 152.9
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 152.5
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 152.0
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 151.8
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 151.6
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 149.0
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 148.8
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 148.7
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 148.4
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 148.1
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 147.9
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 147.7
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 147.6
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 147.3
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 147.0
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 146.8
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 146.7
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 146.5
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 146.4
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 145.8
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 144.5
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 144.2
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 143.1
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 142.8
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 142.4
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 142.4
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 142.3
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 142.3
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 142.2
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 142.2
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 142.2
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 141.9
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 141.6
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 141.5
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 141.3
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 141.2
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 140.3
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 139.4
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 139.2
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 139.2
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 137.7
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 137.6
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 137.0
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 136.8
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 136.7
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 136.6
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 136.5
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 136.3
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 135.2
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 135.2
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 135.2
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 134.7
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 134.2
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 133.9
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 132.8
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 132.6
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 132.0
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 132.0
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 131.7
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 131.7
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 131.6
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 131.5
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 131.1
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 130.9
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 130.9
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 130.8
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 130.6
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 130.1
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 129.3
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 129.3
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 129.0
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 127.4
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 127.2
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 126.9
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 126.8
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 126.4
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 126.2
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 125.6
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 125.2
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 124.9
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 124.8
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 124.4
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 124.1
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 123.7
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 123.4
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 122.2
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 121.7
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 121.5
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 121.1
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 121.0
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 121.0
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 120.9
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 120.5
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 120.4
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 119.9
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 119.6
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 119.5
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 119.4
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 119.4
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 118.8
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 118.8
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 118.6
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 118.5
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 118.0
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 117.9
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 117.7
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 117.4
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 117.2
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 116.9
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 116.5
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 116.1
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 115.9
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 115.6
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 115.3
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 114.9
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 114.5
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 114.3
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 114.2
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 113.6
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 113.3
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 113.0
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 112.8
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 112.2
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 111.0
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 110.9
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 110.9
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 110.1
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 110.0
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 109.7
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 109.5
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 109.5
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 109.3
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 109.2
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 108.8
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 107.4
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 106.8
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 106.4
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 106.3
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 106.0
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 104.9
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 104.3
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 103.1
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 102.3
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 102.3
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 101.1
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 101.0
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 100.9
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 100.8
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 100.4
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 100.2
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 99.2
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 99.0
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 98.7
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 98.4
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 97.8
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 97.8
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 97.6
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 97.1
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 96.6
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 96.0
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 96.0
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 95.6
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 95.2
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 93.7
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 91.6
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 91.3
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 81.8
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 81.1
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 80.3
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 78.4
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Brain - Nucleus accumbens (basal ganglia)
Average nTPM: 126.2
Samples: 246

Max nTPM: 579.2
Min nTPM: 43.4
Std nTPM: 61.9
Median nTPM: 109.2
GTEX-1HFI6-0011-R6b-SM-CM2SR 40-49 years, male 579.2
GTEX-ZUA1-0011-R6b-SM-4YCDD 40-49 years, male 438.9
GTEX-11DYG-0011-R6a-SM-DO936 60-69 years, male 434.7
GTEX-YFC4-0011-R6b-SM-4V6E1 40-49 years, female 404.1
GTEX-1C6WA-0011-R6a-SM-7PBYP 60-69 years, male 348.3
GTEX-1I1HK-0011-R6b-SM-CM2T9 60-69 years, male 343.7
GTEX-YJ89-0011-R6a-SM-4V6GN 60-69 years, male 308.9
GTEX-1H3O1-0011-R6b-SM-CL54U 60-69 years, male 280.6
GTEX-1EN7A-0011-R6b-SM-9QEHW 40-49 years, male 262.3
GTEX-11PRG-0011-R6b-SM-DO923 50-59 years, male 247.9
GTEX-WL46-0011-R6A-SM-3LK6X 50-59 years, male 246.3
GTEX-ZAB4-0011-R6a-SM-4SOKD 40-49 years, male 237.7
GTEX-11DXW-0011-R6a-SM-DO11N 40-49 years, male 216.0
GTEX-11TTK-0011-R6b-SM-DNZZW 60-69 years, female 214.2
GTEX-13N1W-0011-R6a-SM-5MR43 70-79 years, male 200.3
GTEX-11NUK-0011-R6a-SM-DO93O 50-59 years, male 196.6
GTEX-1H23P-0011-R6b-SM-A9G1H 60-69 years, male 195.8
GTEX-16Z82-0011-R6a-SM-7IGLV 60-69 years, male 193.6
GTEX-1N2DW-0011-R6a-SM-EZ6MW 50-59 years, male 193.2
GTEX-1F48J-0011-R6a-SM-CJI2F 50-59 years, female 192.5
GTEX-WVLH-0011-R6A-SM-3MJFZ 50-59 years, male 191.3
GTEX-ZF28-0011-R6a-SM-4WKHI 60-69 years, male 182.1
GTEX-131XW-0011-R6b-SM-5K7XY 50-59 years, female 181.0
GTEX-139TS-0011-R6a-SM-5J2OB 60-69 years, male 180.2
GTEX-1IGQW-0011-R6a-SM-CM2TC 60-69 years, male 178.5
GTEX-1IKK5-0011-R6b-SM-A9SLY 60-69 years, male 177.4
GTEX-11GSP-0011-R6b-SM-57WBQ 60-69 years, female 176.8
GTEX-15DYW-0011-R6b-SM-6PALA 60-69 years, female 173.4
GTEX-Y8DK-0011-R6A-SM-4V6EG 60-69 years, male 173.1
GTEX-1IY9M-0011-R6a-SM-D4P28 60-69 years, male 171.2
GTEX-13SLX-0011-R6a-SM-5PNX4 50-59 years, female 167.7
GTEX-1IKOH-0011-R6b-SM-A9G1W 60-69 years, female 165.3
GTEX-1EWIQ-0011-R6a-SM-ARU8G 70-79 years, female 165.1
GTEX-S7SE-0011-R6A-SM-2XCD9 50-59 years, male 163.9
GTEX-18465-0011-R6a-SM-7LG6M 50-59 years, male 163.6
GTEX-14E7W-0011-R6b-SM-5ZZV3 70-79 years, male 163.2
GTEX-13FXS-0011-R6b-SM-5L3F7 50-59 years, male 163.0
GTEX-1IL2U-0011-R6a-SM-ARZLG 60-69 years, male 160.0
GTEX-RU72-0011-R6A-SM-2TF71 50-59 years, female 159.2
GTEX-17HHY-0011-R6b-SM-7189Z 50-59 years, male 156.5
GTEX-13FHP-0011-R6b-SM-5LZY6 50-59 years, male 155.3
GTEX-Q2AG-0011-R6A-SM-2HML7 40-49 years, female 155.2
GTEX-ZV68-0011-R6a-SM-51MSR 50-59 years, female 155.1
GTEX-1LVAO-0011-R6b-SM-EZ6MX 60-69 years, male 154.9
GTEX-13NYB-0011-R6b-SM-5MR51 40-49 years, male 150.0
GTEX-13G51-0011-R6b-SM-5LZX4 60-69 years, male 149.8
GTEX-1J8Q2-0011-R6a-SM-CKZPG 60-69 years, male 147.9
GTEX-14ABY-0011-R6a-SM-5PNWR 50-59 years, male 147.2
GTEX-145MI-0011-R6a-SM-5PNZA 60-69 years, female 146.1
GTEX-N7MT-0011-R6a-SM-2I3G3 60-69 years, female 143.7
GTEX-1CB4H-0011-R6b-SM-CKZNK 60-69 years, female 143.5
GTEX-WHSE-0011-R6A-SM-3P5ZP 20-29 years, male 142.8
GTEX-145LU-0011-R6a-SM-5S2V6 50-59 years, male 142.4
GTEX-1ICLZ-0011-R6b-SM-A9G3A 60-69 years, male 142.3
GTEX-14C5O-0011-R6a-SM-5YYB6 60-69 years, male 141.7
GTEX-147GR-0011-R6b-SM-5S2RO 60-69 years, male 141.0
GTEX-15G19-0011-R6b-SM-7KUM3 60-69 years, male 139.2
GTEX-1LVA9-0011-R6a-SM-EYYWH 50-59 years, male 137.5
GTEX-1399T-0011-R6b-SM-5K7YL 60-69 years, male 137.4
GTEX-1I1GQ-0011-R6b-SM-CE6SE 50-59 years, male 137.1
GTEX-X261-0011-R6B-SM-4E3J8 50-59 years, male 136.2
GTEX-R55E-0011-R6A-SM-2TC5T 20-29 years, male 135.9
GTEX-1JJEA-0011-R6a-SM-EXUS1 60-69 years, male 135.3
GTEX-WZTO-0011-R6B-SM-4E3J6 40-49 years, male 135.0
GTEX-13OVJ-0011-R6b-SM-5L3GH 50-59 years, female 134.6
GTEX-1GN2E-0011-R6b-SM-9QEII 60-69 years, male 133.8
GTEX-15DCD-0011-R6b-SM-6M46L 70-79 years, female 132.3
GTEX-NL4W-0011-R6a-SM-2I3GA 50-59 years, male 131.5
GTEX-X4XX-0011-R6B-SM-46MWP 60-69 years, male 130.2
GTEX-1LB8K-0011-R6a-SM-EXURT 50-59 years, male 130.2
GTEX-12ZZY-0011-R6b-SM-5EGLA 60-69 years, male 129.7
GTEX-147F4-0011-R6b-SM-5S2UP 50-59 years, male 129.7
GTEX-1I19N-0011-R6b-SM-CY8GC 70-79 years, male 128.3
GTEX-QVJO-0011-R6A-SM-2S1QN 60-69 years, female 128.2
GTEX-11OF3-0011-R6b-SM-57WBG 60-69 years, male 127.5
GTEX-1I1GS-0011-R6b-SM-CMKHE 60-69 years, male 127.1
GTEX-1192X-0011-R6a-SM-DNZZB 50-59 years, male 126.7
GTEX-X585-0011-R6A-SM-46MVJ 50-59 years, male 126.6
GTEX-1GZHY-0011-R6a-SM-9OSWL 50-59 years, female 126.1
GTEX-11NV4-0011-R6a-SM-57WD5 60-69 years, male 124.2
GTEX-15EO6-0011-R6a-SM-7KULK 50-59 years, male 123.3
GTEX-1H4P4-0011-R6a-SM-ARZLR 50-59 years, male 123.3
GTEX-13PL6-0011-R6a-SM-5O9C5 40-49 years, female 122.7
GTEX-17JCI-0011-R6a-SM-72D6D 60-69 years, female 122.2
GTEX-X4XY-0011-R6B-SM-46MVB 60-69 years, male 121.5
GTEX-QVUS-0011-R6A-SM-3GACX 60-69 years, female 120.7
GTEX-ZE7O-0011-R6a-SM-57WCI 50-59 years, female 120.1
GTEX-N7MS-0011-R6a-SM-2HMJ4 60-69 years, male 119.8
GTEX-13OVH-0011-R6b-SM-5LUAX 70-79 years, male 119.1
GTEX-1MJK2-0011-R6a-SM-EXUS3 50-59 years, male 119.1
GTEX-1EKGG-0011-R6a-SM-CL538 60-69 years, male 119.0
GTEX-UTHO-0011-R6A-SM-3GIJW 60-69 years, male 118.2
GTEX-12WSE-0011-R6b-SM-5LZV5 20-29 years, male 117.6
GTEX-13OW6-0011-R6b-SM-5L3GR 50-59 years, male 117.3
GTEX-ZVT3-0011-R6a-SM-51MSU 60-69 years, female 116.8
GTEX-S7PM-0011-R6A-SM-3NM8F 60-69 years, male 116.4
GTEX-ZXG5-0011-R6a-SM-57WBZ 60-69 years, male 116.1
GTEX-144GO-0011-R6b-SM-5S2V7 60-69 years, male 115.9
GTEX-1F7RK-0011-R6b-SM-ARZMG 20-29 years, female 115.6
GTEX-13O3Q-0011-R6a-SM-5KM2V 50-59 years, male 115.5
GTEX-1I1GV-0011-R6b-SM-ARU6Q 60-69 years, male 115.5
GTEX-1I1GR-0011-R6a-SM-CMKHI 60-69 years, male 115.1
GTEX-12ZZX-0011-R6a-SM-5HL8L 40-49 years, female 114.8
GTEX-1445S-0011-R6b-SM-5PNUF 60-69 years, male 114.5
GTEX-1IDJH-0011-R6a-SM-A9SLZ 70-79 years, male 114.5
GTEX-12ZZW-0011-R6a-SM-5DUVZ 50-59 years, male 114.0
GTEX-1F75A-0011-R6b-SM-9QEHD 50-59 years, male 113.3
GTEX-11WQC-0011-R6a-SM-5BC77 60-69 years, male 113.1
GTEX-11DZ1-0011-R6b-SM-DNZZG 50-59 years, male 112.7
GTEX-P44H-0011-R6A-SM-2XCF3 40-49 years, male 112.3
GTEX-1EH9U-0011-R6a-SM-CJI2C 60-69 years, male 112.3
GTEX-13OW8-0011-R6b-SM-5L3I3 60-69 years, male 111.9
GTEX-13FLV-0011-R6a-SM-5KLZ4 50-59 years, male 111.8
GTEX-13X6K-0011-R6a-SM-5P9K6 60-69 years, female 111.5
GTEX-1GZ2Q-0011-R6a-SM-9OSWM 40-49 years, male 111.3
GTEX-WWYW-0011-R6A-SM-3NB3G 50-59 years, female 111.2
GTEX-11O72-0011-R6a-SM-DNZZQ 40-49 years, male 111.1
GTEX-13O3O-0011-R6b-SM-5P9GY 60-69 years, female 110.9
GTEX-1EX96-0011-R6a-SM-9OSVV 50-59 years, male 110.9
GTEX-QDT8-0011-R6A-SM-32PKI 30-39 years, female 110.4
GTEX-1HT8W-0011-R6a-SM-CM2SY 30-39 years, male 110.4
GTEX-14JG1-0011-R6b-SM-5YYAU 40-49 years, male 110.0
GTEX-1GTWX-0011-R6a-SM-A96RN 60-69 years, male 109.3
GTEX-13JVG-0011-R6a-SM-5MR3E 60-69 years, male 109.0
GTEX-13PDP-0011-R6b-SM-5O9D5 60-69 years, male 109.0
GTEX-ZE9C-0011-R6a-SM-4WWCW 60-69 years, male 108.9
GTEX-14PN4-0011-R6b-SM-69LQU 50-59 years, male 108.7
GTEX-1F6IF-0011-R6a-SM-9QEIO 60-69 years, male 108.6
GTEX-13JUV-0011-R6b-SM-5LZYG 40-49 years, female 108.2
GTEX-T6MN-0011-R6A-SM-32QP8 50-59 years, male 108.2
GTEX-139TT-0011-R6b-SM-5J2ON 60-69 years, male 108.0
GTEX-1EMGI-0011-R6a-SM-9OSVR 60-69 years, male 107.9
GTEX-131XH-0011-R6a-SM-5KM2G 50-59 years, male 107.7
GTEX-14753-0011-R6b-SM-5S2UD 60-69 years, male 107.6
GTEX-12WSF-0011-R6b-SM-5HL8W 70-79 years, male 107.5
GTEX-11ONC-0011-R6a-SM-DO12A 60-69 years, male 107.1
GTEX-1E1VI-0011-R6a-SM-9OSVJ 50-59 years, male 106.6
GTEX-13112-0011-R6b-SM-5DUVK 50-59 years, male 105.9
GTEX-1H3VE-0011-R6b-SM-A9G1M 40-49 years, male 105.6
GTEX-18A6Q-0011-R6a-SM-7LG6R 60-69 years, male 105.1
GTEX-145LS-0011-R6b-SM-5PNWL 60-69 years, female 104.7
GTEX-1F75B-0011-R6a-SM-ARZMI 50-59 years, male 104.3
GTEX-12ZZZ-0011-R6b-SM-5EQ5B 60-69 years, male 104.2
GTEX-1GN73-0011-R6b-SM-CJI2T 60-69 years, male 103.3
GTEX-1GZ4I-0011-R6b-SM-9WG77 50-59 years, male 103.3
GTEX-1A8G6-0011-R6b-SM-7P8PE 60-69 years, male 103.2
GTEX-13FLW-0011-R6b-SM-5L3EN 50-59 years, male 103.1
GTEX-13X6J-0011-R6a-SM-5PNUB 50-59 years, male 103.1
GTEX-13OW5-0011-R6b-SM-5O9BW 60-69 years, male 103.0
GTEX-14JIY-0011-R6b-SM-68714 60-69 years, male 103.0
GTEX-1GN1U-0011-R6a-SM-CKZNO 50-59 years, female 102.6
GTEX-132Q8-0011-R6a-SM-5K7YN 60-69 years, male 102.3
GTEX-1AX9I-0011-R6a-SM-7P8PK 60-69 years, male 102.2
GTEX-14ASI-0011-R6a-SM-5S2UZ 60-69 years, male 102.0
GTEX-14PJM-0011-R6a-SM-6872G 50-59 years, female 102.0
GTEX-145MH-0011-R6a-SM-5PNZ7 50-59 years, male 101.9
GTEX-11DXY-0011-R6a-SM-DNZZF 60-69 years, male 101.9
GTEX-1HBPH-0011-R6a-SM-CKZOV 40-49 years, female 101.8
GTEX-P44G-0011-R6A-SM-2XCD3 30-39 years, male 101.3
GTEX-12WSC-0011-R6b-SM-5LU99 50-59 years, male 101.2
GTEX-1H1CY-0011-R6b-SM-CE6RP 60-69 years, female 101.0
GTEX-XMD1-0011-R6A-SM-4AT5K 60-69 years, male 100.7
GTEX-1313W-0011-R6a-SM-5K7XO 50-59 years, female 99.8
GTEX-ZVZQ-0011-R6b-SM-57WAY 60-69 years, female 99.7
GTEX-1HBPI-0011-R6b-SM-A9G1T 50-59 years, male 99.3
GTEX-1RLM8-0011-R6a-SM-EYYXS 50-59 years, male 98.9
GTEX-14BMV-0011-R6b-SM-5YY9I 50-59 years, male 98.6
GTEX-16XZZ-0011-R6a-SM-7IGNE 60-69 years, male 98.4
GTEX-ZDXO-0011-R6a-SM-4WWCT 60-69 years, male 98.2
GTEX-1MA7X-0011-R6a-SM-EYYWR 60-69 years, male 98.1
GTEX-1E2YA-0011-R6b-SM-CE6R2 50-59 years, male 98.0
GTEX-13VXU-0011-R6a-SM-5SI71 50-59 years, male 97.8
GTEX-1A3MX-0011-R6a-SM-7P8S9 60-69 years, male 97.6
GTEX-13S7M-0011-R6b-SM-5O9D8 60-69 years, female 97.2
GTEX-1GMR8-0011-R6b-SM-CE6RC 50-59 years, female 97.1
GTEX-1LC47-0011-R6b-SM-EZ6MI 60-69 years, male 97.0
GTEX-13NYS-0011-R6b-SM-5MR3R 60-69 years, male 96.9
GTEX-14PHW-0011-R6b-SM-5YYAR 60-69 years, female 96.8
GTEX-1B8L1-0011-R6b-SM-7P8SU 60-69 years, male 96.7
GTEX-1HGF4-0011-R6a-SM-A96S1 60-69 years, male 96.3
GTEX-1GF9V-0011-R6b-SM-CJI2Q 60-69 years, male 96.2
GTEX-17HG3-0011-R6b-SM-79OK8 30-39 years, female 96.1
GTEX-XLM4-0011-R6A-SM-4AT4B 60-69 years, male 96.0
GTEX-1B8SF-0011-R6b-SM-7MXUD 60-69 years, male 95.9
GTEX-T2IS-0011-R6A-SM-32QP2 20-29 years, female 95.8
GTEX-13OVL-0011-R6a-SM-5L3G4 50-59 years, male 95.6
GTEX-14BIM-0011-R6b-SM-5S2VB 60-69 years, female 95.5
GTEX-1HBPM-0011-R6b-SM-ARU73 60-69 years, female 95.1
GTEX-1H1ZS-0011-R6b-SM-A9G1F 70-79 years, male 94.6
GTEX-NL3H-0011-R6a-SM-2I3G8 60-69 years, male 93.9
GTEX-17EVP-0011-R6b-SM-7LT99 40-49 years, male 93.3
GTEX-1C64N-0011-R6a-SM-7IGO9 50-59 years, male 92.7
GTEX-1H1DG-0011-R6a-SM-A9SK8 70-79 years, male 92.0
GTEX-16YQH-0011-R6b-SM-7938T 30-39 years, male 91.8
GTEX-15RJE-0011-R6a-SM-7DHL8 40-49 years, male 91.7
GTEX-1R46S-0011-R6a-SM-EZ6N6 60-69 years, female 91.1
GTEX-12WSM-0011-R6b-SM-5EQ6N 60-69 years, male 90.9
GTEX-15CHQ-0011-R6b-SM-69LOX 60-69 years, male 90.8
GTEX-1CB4G-0011-R6b-SM-9QEGO 60-69 years, male 90.8
GTEX-1GF9W-0011-R6b-SM-9QEIE 60-69 years, male 90.8
GTEX-1OJC4-0011-R6a-SM-EXOIM 50-59 years, female 90.4
GTEX-12584-0011-R6a-SM-5NQ7C 40-49 years, male 90.1
GTEX-17F97-0011-R6a-SM-7EPGS 50-59 years, male 89.9
GTEX-1B933-0011-R6b-SM-79OOQ 50-59 years, female 89.6
GTEX-13RTJ-0011-R6a-SM-5SI74 60-69 years, male 89.3
GTEX-1C6VR-0011-R6a-SM-7MXU8 60-69 years, male 87.8
GTEX-1H3NZ-0011-R6b-SM-A9G1N 60-69 years, male 87.6
GTEX-15ER7-0011-R6a-SM-6M46M 20-29 years, female 87.3
GTEX-12WSD-0011-R6b-SM-5P9JU 60-69 years, female 87.2
GTEX-17MF6-0011-R6b-SM-7LG6G 40-49 years, male 86.9
GTEX-14LZ3-0011-R6a-SM-D3L8C 60-69 years, female 86.8
GTEX-1BAJH-0011-R6b-SM-7MXT2 70-79 years, male 86.1
GTEX-1HB9E-0011-R6b-SM-A9G1P 50-59 years, male 85.0
GTEX-13N2G-0011-R6b-SM-5MR3P 60-69 years, male 84.8
GTEX-TSE9-0011-R6A-SM-3DB7L 60-69 years, female 84.3
GTEX-18464-0011-R6a-SM-731CA 50-59 years, male 84.2
GTEX-PWO3-0011-R6A-SM-2I5F3 60-69 years, female 84.1
GTEX-1GMRU-0011-R6b-SM-A9G3B 50-59 years, male 83.4
GTEX-13FHO-0011-R6b-SM-5LZX1 60-69 years, male 82.9
GTEX-NPJ8-0011-R6a-SM-2HMKB 40-49 years, male 82.6
GTEX-1I1CD-0011-R6b-SM-CJI3Y 60-69 years, female 82.3
GTEX-T5JC-0011-R6A-SM-D3L87 20-29 years, male 82.3
GTEX-12WSH-0011-R6b-SM-5P9F4 50-59 years, male 82.2
GTEX-1F75W-0011-R6a-SM-9QEI5 60-69 years, male 82.1
GTEX-1F88E-0011-R6a-SM-CKZNW 60-69 years, female 82.0
GTEX-14PQA-0011-R6b-SM-6AJAM 50-59 years, female 81.4
GTEX-1HUB1-0011-R6b-SM-ARU6W 60-69 years, male 81.3
GTEX-1CB4J-0011-R6b-SM-9WG7B 60-69 years, male 81.1
GTEX-1J1OQ-0011-R6a-SM-ARU86 40-49 years, female 81.1
GTEX-QMR6-0011-R6A-SM-32PKP 50-59 years, male 80.4
GTEX-NPJ7-0011-R6a-SM-2I3G7 60-69 years, female 79.5
GTEX-1JMLX-0011-R6b-SM-EXUT9 50-59 years, male 79.3
GTEX-Z93S-0011-R6b-SM-4RGNJ 50-59 years, male 79.0
GTEX-13QJC-0011-R6a-SM-5S2VI 60-69 years, female 78.6
GTEX-1LH75-0011-R6a-SM-EXURS 50-59 years, female 77.4
GTEX-183WM-0011-R6b-SM-72D66 70-79 years, female 76.8
GTEX-144GL-0011-R6a-SM-5P9HW 50-59 years, male 76.0
GTEX-1F6I4-0011-R6a-SM-CE6R4 60-69 years, male 75.8
GTEX-14BIN-0011-R6a-SM-5S2RH 50-59 years, female 75.2
GTEX-1HR9M-0011-R6a-SM-ARU6Z 60-69 years, male 74.2
GTEX-13SLW-0011-R6a-SM-5O9BH 70-79 years, male 71.8
GTEX-17EVQ-0011-R6a-SM-7189U 70-79 years, male 70.4
GTEX-13IVO-0011-R6b-SM-5K7X9 70-79 years, male 66.1
GTEX-1B996-0011-R6b-SM-793AQ 60-69 years, male 64.3
GTEX-OHPN-0011-R6A-SM-2I5FH 60-69 years, female 60.0
GTEX-X4EP-0011-R6A-SM-3P629 60-69 years, female 43.4
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Brain - Putamen (basal ganglia)
Average nTPM: 186.8
Samples: 205

Max nTPM: 743.4
Min nTPM: 85.9
Std nTPM: 69.5
Median nTPM: 177.4
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 743.4
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 647.7
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 388.2
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 365.9
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 322.6
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 302.2
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 293.1
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 292.8
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 286.2
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 286.1
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 284.3
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 276.6
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 258.5
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 258.1
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 252.5
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 251.3
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 246.8
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 240.5
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 239.8
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 238.5
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 236.8
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 236.5
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 235.4
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 233.0
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 229.4
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 228.2
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 228.2
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 228.1
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 228.0
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 227.1
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 226.4
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 225.8
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 223.1
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 222.8
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 222.1
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 221.5
GTEX-N7MS-0011-R7a-SM-2HMKN 60-69 years, male 221.3
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 220.0
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 219.4
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 219.2
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 219.0
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 217.5
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 217.3
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 217.2
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 217.1
GTEX-R55E-0011-R7A-SM-2TC5Z 20-29 years, male 214.6
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 214.3
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 213.5
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 213.0
GTEX-18464-0011-R7b-SM-731CM 50-59 years, male 212.6
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 212.1
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 212.0
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 211.6
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 211.3
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 209.6
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 207.6
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 205.9
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 204.4
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 204.1
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 203.8
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 203.1
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 202.5
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 202.3
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 202.3
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 202.0
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 201.5
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 201.4
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 200.1
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 199.5
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 197.9
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 197.5
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 197.2
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 197.1
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 196.7
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 196.4
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 196.4
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 194.8
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 194.1
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 193.8
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 193.3
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 193.1
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 193.1
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 192.9
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 192.1
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 191.3
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 189.6
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 189.4
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 189.3
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 189.1
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 186.2
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 185.9
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 185.8
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 185.5
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 184.7
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 184.6
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 182.2
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 181.8
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 181.5
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 181.5
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 181.4
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 179.9
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 179.4
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 177.4
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 176.9
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 175.3
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 174.7
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 174.6
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 174.5
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 173.4
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 173.3
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 172.4
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 172.2
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 172.0
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 171.3
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 171.0
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 170.1
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 169.8
GTEX-1IOXB-0011-R7b-SM-CE6SM 50-59 years, male 169.6
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 169.5
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 168.7
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 168.6
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 167.2
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 165.7
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 165.6
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 165.1
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 164.6
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 163.7
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 163.4
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 163.3
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 163.0
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 162.7
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 162.2
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 161.5
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 161.5
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 160.6
GTEX-P44G-0011-R7A-SM-2I3F9 30-39 years, male 160.6
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 160.4
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 160.3
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 160.0
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 158.6
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 157.9
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 157.7
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 157.5
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 157.4
GTEX-NL3H-0011-R7a-SM-2I3G5 60-69 years, male 154.5
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 153.7
GTEX-RU72-0011-R7A-SM-2TF5U 50-59 years, female 152.4
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 152.4
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 151.4
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 151.1
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 151.0
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 150.9
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 150.0
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 148.8
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 147.6
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 147.2
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 147.0
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 145.9
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 145.1
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 144.3
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 144.1
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 143.8
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 143.1
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 142.2
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 141.7
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 140.2
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 139.0
GTEX-NPJ8-0011-R7a-SM-2HMJV 40-49 years, male 138.1
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 138.0
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 135.4
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 134.8
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 134.8
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 134.6
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 132.4
GTEX-TSE9-0011-R7A-SM-3DB7P 60-69 years, female 132.2
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 131.2
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 130.4
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 129.2
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 128.7
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 128.4
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 127.9
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 127.2
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 127.0
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 124.6
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 124.1
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 122.5
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 120.8
GTEX-QVJO-0011-R7A-SM-2S1QO 60-69 years, female 120.6
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 120.6
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 120.2
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 118.8
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 118.3
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 117.7
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 117.1
GTEX-S7SE-0011-R7A-SM-2XCDI 50-59 years, male 116.3
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 114.9
GTEX-1J1OQ-0011-R7b-SM-ARU87 40-49 years, female 113.5
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 112.6
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 111.4
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 110.5
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 105.6
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 102.1
GTEX-OHPN-0011-R7A-SM-2I5FI 60-69 years, female 91.9
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 89.2
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 85.9
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BASAL GANGLIA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

394.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 156.7
FF:10164-103B2 76 years, female 156.7
Nucleus accumbens
Scaled Tags Per Million: 156.8
FF:10037-101F1 23-56 years, mixed 156.8
Putamen
Scaled Tags Per Million: 139.8
FF:10176-103C5 60 years, female 139.8
Globus pallidus
Scaled Tags Per Million: 394.2
FF:10161-103A8 76 years, female 429.7
FF:10175-103C4 60 years, female 358.6

BASAL GANGLIA - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

195.4
Pig sample Sample description nTPM
Caudate
nTPM: 127.0
Samples: 4

Max nTPM: 142.9
Min nTPM: 112.5
Sample A Female 112.5
Sample B Female 129.5
Sample C Male 142.9
Sample D Male 122.9
Putamen
nTPM: 195.4
Samples: 4

Max nTPM: 230.5
Min nTPM: 140.8
Sample A Female 230.5
Sample B Female 140.8
Sample C Male 189.0
Sample D Male 221.4
Septum
nTPM: 137.0
Samples: 4

Max nTPM: 159.9
Min nTPM: 124.9
Sample A Female 131.1
Sample B Female 131.9
Sample C Male 124.9
Sample D Male 159.9
Ventral pallidum
nTPM: 168.5
Samples: 4

Max nTPM: 194.5
Min nTPM: 115.3
Sample A Female 115.3
Sample B Female 170.3
Sample C Male 194.5
Sample D Male 193.9

BASAL GANGLIA - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

153.0
Mouse sample Sample description nTPM
Caudate putamen
nTPM: 153.0
Samples: 4

Max nTPM: 160.7
Min nTPM: 144.7
Sample A Male 144.7
Sample B Male 152.0
Sample C Female 160.7
Sample D Female 154.5
Septum
nTPM: 139.8
Samples: 4

Max nTPM: 146.6
Min nTPM: 135.3
Sample A Male 146.6
Sample B Male 135.3
Sample C Female 139.8
Sample D Female 137.4
Ventral forebrain
nTPM: 150.3
Samples: 4

Max nTPM: 160.7
Min nTPM: 138.8
Sample A Male 160.1
Sample B Male 138.8
Sample C Female 141.7
Sample D Female 160.7

BASAL GANGLIA - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

1.5
Allen experiment id Experiment description Expression energy
Striatum
Expression energy: 1.5
69549619 Antisense, RP_050222_01_F03, Mouse strain C57BL/6J (56 days, male) 1.5
Pallidum
Expression energy: 0.9
69549619 Antisense, RP_050222_01_F03, Mouse strain C57BL/6J (56 days, male) 0.9

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