HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Medium
RNA expressioni
Consensus:316.2 nTPM
HPA Brain:121.6 nTPM
GTEx:316.2 nTPM
FANTOM5:141.3 Scaled Tags Per Million
Pig:130.8 nTPM
Mouse:237.2 nTPM

HIPPOCAMPUS - Antibody stainingi
Antibody HPA046693
Glial cells Low
Neuronal cells Medium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 121.6
Sample id Sample description nTPM
Hippocampus
nTPM: 104.8
1898 Male, age 80, left hemisphere 169.9
2529 Female, age 94, left hemisphere 98.1
2621 Female, age 67, right hemisphere 96.0
1855 Male, age 76, left hemisphere 94.7
1911 Female, age 85, right hemisphere 93.6
2148 Female, age 91, left hemisphere 76.5
Dentate gyrus
nTPM: 94.8
2010 Male, age 76, both hemispheres 130.6
1927 Female, age 91, both hemispheres 119.9
2530 Female, age 94, left hemisphere 100.2
2528 Male, age 74, both hemispheres 81.8
2246 Female, age 85, both hemispheres 75.6
2531 Female, age 67, both hemispheres 60.5
Entorhinal gyrus
nTPM: 90.7
2764 Male, age 80, right hemisphere 113.3
1938 Female, age 85, left hemisphere 109.8
1787 Male, age 76, left hemisphere 102.2
2117 Female, age 91, right hemisphere 85.7
2686 Male, age 75, right hemisphere 72.3
2613 Female, age 94, left hemisphere 60.8
Hippocampus, CA1
nTPM: 121.6
2749 Male, age 80, left hemisphere 179.6
1873 Female, age 85, both hemispheres 115.3
2527 Male, age 74, both hemispheres 115.2
2045 Male, age 76, both hemispheres 108.8
2082 Female, age 91, right hemisphere 89.1
Hippocampus, CA2
nTPM: 118.2
1892 Male, age 76, both hemispheres 158.0
1963 Male, age 80, left hemisphere 148.1
2249 Male, age 74, both hemispheres 134.2
2437 Female, age 94, left hemisphere 95.2
1940 Female, age 85, left hemisphere 92.0
2113 Female, age 91, right hemisphere 81.7
Hippocampus, CA3
nTPM: 103.8
2436 Male, age 74, both hemispheres 135.6
1867 Male, age 76, both hemispheres 134.4
1891 Female, age 85, both hemispheres 106.7
2137 Male, age 80, left hemisphere 106.3
2620 Female, age 94, left hemisphere 70.6
2861 Female, age 67, both hemispheres 69.5
Parahippocampal cortex
nTPM: 94.5
1850 Male, age 80, both hemispheres 128.6
2018 Male, age 76, both hemispheres 120.7
2250 Female, age 67, right hemisphere 112.5
1933 Female, age 85, both hemispheres 112.3
1990 Female, age 91, right hemisphere 99.3
2245 Female, age 91, both hemispheres 87.5
2693 Female, age 94, both hemispheres 84.3
2532 Female, age 72, left hemisphere 70.8
2692 Male, age 74, both hemispheres 66.5
2622 Female, age 67, right hemisphere 63.2
Perirhinal gyrus
nTPM: 119.3
1847 Female, age 91, left hemisphere 161.0
1794 Male, age 80, right hemisphere 136.2
1841 Female, age 85, right hemisphere 127.2
2521 Female, age 94, right hemisphere 89.4
2848 Male, age 76, right hemisphere 82.9
Subiculum
nTPM: 96.5
1901 Male, age 80, both hemispheres 117.6
1977 Female, age 85, both hemispheres 112.9
2042 Male, age 76, both hemispheres 106.3
2619 Male, age 74, both hemispheres 101.7
2729 Female, age 91, right hemisphere 74.6
2438 Female, age 94, left hemisphere 65.9

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 316.2
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 316.2
Samples: 197

Max nTPM: 1075.1
Min nTPM: 138.2
Std nTPM: 115.6
Median nTPM: 301.2
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 1075.1
GTEX-13NYB-0011-R1b-SM-5KM4F 40-49 years, male 709.5
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 704.5
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 651.6
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 624.0
GTEX-1LG7Y-0011-R1a-SM-EYYWV 50-59 years, male 589.3
GTEX-1GMR8-0011-R1b-SM-CJI2O 50-59 years, female 583.4
GTEX-1399T-0011-R1b-SM-5DUWN 60-69 years, male 578.8
GTEX-NL3H-0011-R1a-SM-48TDJ 60-69 years, male 562.7
GTEX-14PN4-0011-R1b-SM-69LP8 50-59 years, male 561.5
GTEX-1F75A-0011-R1b-SM-CE6RA 50-59 years, male 556.1
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 141.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 141.3
FF:10169-103B7 60 years, female 183.8
FF:10153-102I9 76 years, female 98.8

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 130.8
Pig sample Sample description nTPM
Subiculum
nTPM: 99.9
Samples: 4

Max nTPM: 140.4
Min nTPM: 81.6
Sample A Female 140.4
Sample B Female 91.4
Sample C Male 81.6
Sample D Male 86.2
Dorsal hippocampus
nTPM: 130.8
Samples: 4

Max nTPM: 184.0
Min nTPM: 95.9
Sample A Female 184.0
Sample B Female 130.9
Sample C Male 112.4
Sample D Male 95.9
Entorhinal cortex
nTPM: 119.8
Samples: 4

Max nTPM: 150.6
Min nTPM: 85.2
Sample A Female 122.0
Sample B Female 150.6
Sample C Male 121.3
Sample D Male 85.2
Ventral hippocampus
nTPM: 123.0
Samples: 4

Max nTPM: 156.6
Min nTPM: 94.0
Sample A Female 156.6
Sample B Female 94.0
Sample C Male 133.1
Sample D Male 108.3

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 237.2
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 237.3
Samples: 4

Max nTPM: 267.8
Min nTPM: 222.2
Sample A Male 228.8
Sample B Male 267.8
Sample C Female 230.2
Sample D Female 222.2
Hippocampal formation
nTPM: 223.2
Samples: 4

Max nTPM: 262.1
Min nTPM: 185.2
Sample A Male 228.8
Sample B Male 216.8
Sample C Female 185.2
Sample D Female 262.1

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