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BRAIN BASAL GANGLIA Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS MEDULLA OBLONGATA
MIDBRAIN OLFACTORY BULB PITUITARY GLAND PONS RETINA SPINAL CORD THALAMUS WHITE MATTER
PRIMARY MOUSE DATA
ANTIBODIES
AND
VALIDATION
Brain proteome
Basal ganglia
BASAL GANGLIA - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glial cells: Low
Neuronal cells: Medium
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:19.1 nTPM
HPA Brain:39.2 nTPM
GTEx:19.1 nTPM
FANTOM5:3.4 Scaled Tags Per Million
Pig:21.1 nTPM
Mouse:40.1 nTPM
Allen mouse:1.3 Expression energy

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA030251
Glial cells Low
Neuronal cells Medium


BASAL GANGLIA - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

39.2
Sample id Sample description nTPM
Caudate nucleus
nTPM: 37.2
2290 Female, age 72, unknown 61.8
1857 Female, age 85, left hemisphere 49.9
1854 Male, age 80, left hemisphere 49.0
2289 Male, age 61, right hemisphere 40.0
2846 Female, age 79, unknown 36.3
1781 Male, age 74, unknown 30.8
2288 Male, age 75, left hemisphere 15.5
2481 Female, age 94, left hemisphere 14.8
Globus pallidus, externus
nTPM: 4.6
2646 Male, age 61, right hemisphere 9.7
2567 Female, age 72, unknown 4.6
2772 Female, age 79, unknown 3.5
2395 Male, age 75, both hemispheres 2.7
1996 Male, age 80, right hemisphere 2.4
Globus pallidus, internus
nTPM: 3.7
2483 Female, age 94, right hemisphere 9.9
2778 Female, age 91, both hemispheres 3.4
2566 Female, age 72, unknown 3.1
1818 Male, age 74, unknown 2.6
2037 Male, age 80, right hemisphere 2.3
2287 Male, age 75, right hemisphere 2.2
2111 Female, age 85, right hemisphere 2.1
Nucleus accumbens
nTPM: 35.3
1856 Female, age 91, right hemisphere 60.5
1783 Male, age 74, unknown 53.7
2824 Male, age 61, right hemisphere 48.9
1806 Female, age 85, left hemisphere 47.0
2698 Female, age 72, unknown 34.2
2286 Male, age 75, left hemisphere 17.5
2391 Female, age 94, left hemisphere 12.5
2732 Male, age 80, right hemisphere 8.4
Nucleus basalis of Meynert
nTPM: 21.3
2393 Male, age 80, right hemisphere 35.2
2484 Female, age 94, left hemisphere 25.2
2569 Male, age 61, both hemispheres 14.3
2821 Male, age 75, both hemispheres 10.6
Nucleus of the diagonal band
nTPM: 2.0
1812 Female, age 91, both hemispheres 3.1
1979 Male, age 74, unknown 2.4
2029 Male, age 61, right hemisphere 1.8
2195 Female, age 85, both hemispheres 1.4
2775 Male, age 80, right hemisphere 1.0
Putamen
nTPM: 39.2
1838 Male, age 80, right hemisphere 66.4
1937 Female, age 91, right hemisphere 51.6
2489 Female, age 72, unknown 41.9
1829 Male, age 74, unknown 41.8
2466 Female, age 79, unknown 35.7
2482 Female, age 94, left hemisphere 19.1
2647 Male, age 75, left hemisphere 18.1
Septal nuclei
nTPM: 2.4
2394 Male, age 61, left hemisphere 6.6
2199 Male, age 80, right hemisphere 2.5
2009 Female, age 91, both hemispheres 2.2
2059 Female, age 85, both hemispheres 2.2
2031 Female, age 72, unknown 1.4
1960 Male, age 74, unknown 1.2
2629 Female, age 94, right hemisphere 0.8
Stria terminalis, bed nucleus
nTPM: 2.8
2486 Female, age 94, both hemispheres 3.9
1974 Female, age 91, both hemispheres 2.3
2201 Male, age 74, unknown 2.1

BASAL GANGLIA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

19.1
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 18.4
Samples: 246

Max nTPM: 50.4
Min nTPM: 1.2
Std nTPM: 10.0
Median nTPM: 17.1
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 50.4
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 45.5
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 44.9
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 42.4
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 39.9
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 39.7
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 38.2
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 38.2
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 38.0
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 38.0
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 36.8
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 36.4
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 36.2
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 36.0
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 35.5
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 35.2
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 35.0
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 34.8
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 34.6
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 34.1
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 34.1
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 34.1
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 34.0
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 33.8
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 33.7
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 32.5
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 32.2
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 31.8
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 31.7
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 31.1
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 31.0
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 30.5
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 30.4
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 30.2
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 30.1
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 30.1
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 30.0
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 29.7
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 29.5
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 28.9
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 28.6
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 28.3
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 28.2
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 28.1
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 28.1
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 28.0
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 27.9
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 27.8
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 27.7
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 27.5
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 26.7
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 26.6
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 26.4
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 26.2
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 26.0
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 25.8
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 25.6
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 25.6
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 25.6
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 25.2
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 25.2
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 25.2
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 24.8
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 24.7
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 24.7
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 24.5
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 24.3
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 24.2
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 24.2
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 24.1
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 24.0
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 24.0
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 23.9
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 23.9
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 23.4
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 23.3
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 23.3
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 23.1
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 23.0
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 22.9
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 22.8
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 22.7
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 22.5
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 22.3
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 22.3
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 22.3
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 22.2
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 22.1
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 21.7
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 21.4
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 21.3
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 21.1
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 20.9
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 20.9
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 20.9
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 20.8
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 20.5
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 20.4
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 20.3
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 20.3
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 20.0
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 20.0
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 19.6
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 19.5
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 19.2
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 19.1
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 18.7
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 18.7
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 18.5
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 18.3
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 18.3
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 18.0
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 17.9
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 17.7
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 17.7
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 17.7
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 17.6
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 17.5
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 17.5
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 17.4
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 17.2
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 17.2
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 17.1
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 17.0
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 17.0
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 16.9
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 16.9
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 16.8
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 16.8
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 16.8
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 16.8
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 16.7
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 16.4
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 16.4
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 16.3
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 16.3
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 16.2
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 16.1
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 16.1
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 15.9
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 15.8
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 15.5
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 15.4
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 15.4
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 15.4
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 15.4
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 15.2
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 15.1
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 15.1
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 15.1
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 15.0
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 14.9
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 14.8
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 14.6
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 14.5
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 14.4
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 14.4
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 14.4
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 14.2
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 14.2
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 14.1
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 14.1
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 13.7
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 13.0
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 13.0
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 12.7
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 12.3
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 12.2
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 11.6
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 11.5
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 11.5
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 11.3
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 11.3
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 10.9
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 10.6
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 10.6
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 10.5
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 10.5
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 10.4
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 10.3
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 10.3
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 10.2
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 10.2
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 10.2
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 10.0
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 9.7
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 9.6
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 9.6
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 9.6
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 9.3
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 9.0
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 8.8
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 8.7
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 8.7
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 8.7
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 8.7
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 8.6
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 8.4
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 8.2
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 8.1
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 7.9
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 7.8
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 7.8
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 7.7
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 7.6
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 7.5
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 7.5
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 7.4
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 7.4
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 7.4
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 7.4
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 7.3
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 7.2
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 7.1
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 6.9
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 6.8
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 6.8
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 6.6
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 6.4
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 6.4
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 6.3
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 6.0
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 6.0
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 5.9
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 5.8
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 5.8
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 5.7
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 5.6
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 5.3
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 5.2
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 5.1
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 5.0
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 4.9
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 4.8
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 4.8
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 4.7
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 4.7
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 4.7
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 3.7
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 3.3
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 3.2
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 3.1
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 2.9
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 2.5
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 2.4
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 1.2
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Brain - Nucleus accumbens (basal ganglia)
Average nTPM: 19.1
Samples: 246

Max nTPM: 54.0
Min nTPM: 0.6
Std nTPM: 10.9
Median nTPM: 19.7
GTEX-12WSH-0011-R6b-SM-5P9F4 50-59 years, male 54.0
GTEX-1I1CD-0011-R6b-SM-CJI3Y 60-69 years, female 50.6
GTEX-1IDJH-0011-R6a-SM-A9SLZ 70-79 years, male 48.7
GTEX-1J8Q2-0011-R6a-SM-CKZPG 60-69 years, male 47.8
GTEX-1F75A-0011-R6b-SM-9QEHD 50-59 years, male 45.3
GTEX-1F7RK-0011-R6b-SM-ARZMG 20-29 years, female 43.2
GTEX-13O3O-0011-R6b-SM-5P9GY 60-69 years, female 41.0
GTEX-1AX9I-0011-R6a-SM-7P8PK 60-69 years, male 40.3
GTEX-1F6IF-0011-R6a-SM-9QEIO 60-69 years, male 39.8
GTEX-1HUB1-0011-R6b-SM-ARU6W 60-69 years, male 39.5
GTEX-Q2AG-0011-R6A-SM-2HML7 40-49 years, female 38.8
GTEX-1GZ4I-0011-R6b-SM-9WG77 50-59 years, male 38.7
GTEX-1I1GR-0011-R6a-SM-CMKHI 60-69 years, male 38.4
GTEX-1IKK5-0011-R6b-SM-A9SLY 60-69 years, male 37.3
GTEX-17MF6-0011-R6b-SM-7LG6G 40-49 years, male 36.7
GTEX-13IVO-0011-R6b-SM-5K7X9 70-79 years, male 36.2
GTEX-1HB9E-0011-R6b-SM-A9G1P 50-59 years, male 35.9
GTEX-1GTWX-0011-R6a-SM-A96RN 60-69 years, male 35.4
GTEX-1MJK2-0011-R6a-SM-EXUS3 50-59 years, male 35.2
GTEX-1HGF4-0011-R6a-SM-A96S1 60-69 years, male 34.2
GTEX-1LVAO-0011-R6b-SM-EZ6MX 60-69 years, male 34.0
GTEX-14BIN-0011-R6a-SM-5S2RH 50-59 years, female 33.4
GTEX-11DXY-0011-R6a-SM-DNZZF 60-69 years, male 33.4
GTEX-1I1GV-0011-R6b-SM-ARU6Q 60-69 years, male 33.4
GTEX-ZDXO-0011-R6a-SM-4WWCT 60-69 years, male 33.3
GTEX-18464-0011-R6a-SM-731CA 50-59 years, male 33.2
GTEX-N7MS-0011-R6a-SM-2HMJ4 60-69 years, male 33.0
GTEX-17EVQ-0011-R6a-SM-7189U 70-79 years, male 32.6
GTEX-WWYW-0011-R6A-SM-3NB3G 50-59 years, female 32.0
GTEX-13S7M-0011-R6b-SM-5O9D8 60-69 years, female 31.7
GTEX-1JMLX-0011-R6b-SM-EXUT9 50-59 years, male 31.6
GTEX-1OJC4-0011-R6a-SM-EXOIM 50-59 years, female 31.6
GTEX-145LS-0011-R6b-SM-5PNWL 60-69 years, female 31.0
GTEX-1HR9M-0011-R6a-SM-ARU6Z 60-69 years, male 30.9
GTEX-13OVL-0011-R6a-SM-5L3G4 50-59 years, male 30.8
GTEX-14JIY-0011-R6b-SM-68714 60-69 years, male 30.5
GTEX-NPJ7-0011-R6a-SM-2I3G7 60-69 years, female 30.5
GTEX-1GN73-0011-R6b-SM-CJI2T 60-69 years, male 30.2
GTEX-1JJEA-0011-R6a-SM-EXUS1 60-69 years, male 30.1
GTEX-13NYB-0011-R6b-SM-5MR51 40-49 years, male 29.9
GTEX-WHSE-0011-R6A-SM-3P5ZP 20-29 years, male 29.8
GTEX-X585-0011-R6A-SM-46MVJ 50-59 years, male 29.4
GTEX-12WSM-0011-R6b-SM-5EQ6N 60-69 years, male 28.9
GTEX-1J1OQ-0011-R6a-SM-ARU86 40-49 years, female 28.8
GTEX-1GF9V-0011-R6b-SM-CJI2Q 60-69 years, male 28.4
GTEX-1I1GQ-0011-R6b-SM-CE6SE 50-59 years, male 28.3
GTEX-12ZZX-0011-R6a-SM-5HL8L 40-49 years, female 28.1
GTEX-12ZZY-0011-R6b-SM-5EGLA 60-69 years, male 27.9
GTEX-13NYS-0011-R6b-SM-5MR3R 60-69 years, male 27.6
GTEX-12WSF-0011-R6b-SM-5HL8W 70-79 years, male 27.4
GTEX-X4XX-0011-R6B-SM-46MWP 60-69 years, male 27.4
GTEX-13X6K-0011-R6a-SM-5P9K6 60-69 years, female 27.3
GTEX-13FHO-0011-R6b-SM-5LZX1 60-69 years, male 27.1
GTEX-12WSC-0011-R6b-SM-5LU99 50-59 years, male 27.0
GTEX-1MA7X-0011-R6a-SM-EYYWR 60-69 years, male 27.0
GTEX-13FLV-0011-R6a-SM-5KLZ4 50-59 years, male 26.7
GTEX-S7SE-0011-R6A-SM-2XCD9 50-59 years, male 26.7
GTEX-1B8SF-0011-R6b-SM-7MXUD 60-69 years, male 26.7
GTEX-1F88E-0011-R6a-SM-CKZNW 60-69 years, female 26.6
GTEX-13X6J-0011-R6a-SM-5PNUB 50-59 years, male 26.3
GTEX-1A3MX-0011-R6a-SM-7P8S9 60-69 years, male 26.3
GTEX-1LVA9-0011-R6a-SM-EYYWH 50-59 years, male 26.2
GTEX-14JG1-0011-R6b-SM-5YYAU 40-49 years, male 26.1
GTEX-13O3Q-0011-R6a-SM-5KM2V 50-59 years, male 26.0
GTEX-14BMV-0011-R6b-SM-5YY9I 50-59 years, male 25.7
GTEX-14PJM-0011-R6a-SM-6872G 50-59 years, female 25.7
GTEX-11NV4-0011-R6a-SM-57WD5 60-69 years, male 25.4
GTEX-1ICLZ-0011-R6b-SM-A9G3A 60-69 years, male 25.1
GTEX-1GN1U-0011-R6a-SM-CKZNO 50-59 years, female 24.9
GTEX-132Q8-0011-R6a-SM-5K7YN 60-69 years, male 24.7
GTEX-NL3H-0011-R6a-SM-2I3G8 60-69 years, male 24.7
GTEX-ZXG5-0011-R6a-SM-57WBZ 60-69 years, male 24.7
GTEX-1IY9M-0011-R6a-SM-D4P28 60-69 years, male 24.7
GTEX-144GO-0011-R6b-SM-5S2V7 60-69 years, male 24.5
GTEX-11OF3-0011-R6b-SM-57WBG 60-69 years, male 24.3
GTEX-14ASI-0011-R6a-SM-5S2UZ 60-69 years, male 24.2
GTEX-WVLH-0011-R6A-SM-3MJFZ 50-59 years, male 24.2
GTEX-13112-0011-R6b-SM-5DUVK 50-59 years, male 24.0
GTEX-131XH-0011-R6a-SM-5KM2G 50-59 years, male 23.8
GTEX-1B933-0011-R6b-SM-79OOQ 50-59 years, female 23.7
GTEX-1B8L1-0011-R6b-SM-7P8SU 60-69 years, male 23.7
GTEX-14PQA-0011-R6b-SM-6AJAM 50-59 years, female 23.6
GTEX-N7MT-0011-R6a-SM-2I3G3 60-69 years, female 23.5
GTEX-11O72-0011-R6a-SM-DNZZQ 40-49 years, male 23.5
GTEX-145LU-0011-R6a-SM-5S2V6 50-59 years, male 23.4
GTEX-X4EP-0011-R6A-SM-3P629 60-69 years, female 23.2
GTEX-18A6Q-0011-R6a-SM-7LG6R 60-69 years, male 23.1
GTEX-13VXU-0011-R6a-SM-5SI71 50-59 years, male 22.7
GTEX-1F75W-0011-R6a-SM-9QEI5 60-69 years, male 22.7
GTEX-XLM4-0011-R6A-SM-4AT4B 60-69 years, male 22.6
GTEX-147GR-0011-R6b-SM-5S2RO 60-69 years, male 22.5
GTEX-11WQC-0011-R6a-SM-5BC77 60-69 years, male 22.4
GTEX-1R46S-0011-R6a-SM-EZ6N6 60-69 years, female 22.3
GTEX-1I1GS-0011-R6b-SM-CMKHE 60-69 years, male 22.2
GTEX-Y8DK-0011-R6A-SM-4V6EG 60-69 years, male 22.1
GTEX-1E1VI-0011-R6a-SM-9OSVJ 50-59 years, male 22.1
GTEX-QMR6-0011-R6A-SM-32PKP 50-59 years, male 22.0
GTEX-1GF9W-0011-R6b-SM-9QEIE 60-69 years, male 22.0
GTEX-1313W-0011-R6a-SM-5K7XO 50-59 years, female 21.9
GTEX-13OW6-0011-R6b-SM-5L3GR 50-59 years, male 21.9
GTEX-1EX96-0011-R6a-SM-9OSVV 50-59 years, male 21.9
GTEX-1H1DG-0011-R6a-SM-A9SK8 70-79 years, male 21.9
GTEX-RU72-0011-R6A-SM-2TF71 50-59 years, female 21.6
GTEX-12ZZZ-0011-R6b-SM-5EQ5B 60-69 years, male 21.5
GTEX-ZE9C-0011-R6a-SM-4WWCW 60-69 years, male 21.4
GTEX-14LZ3-0011-R6a-SM-D3L8C 60-69 years, female 21.2
GTEX-144GL-0011-R6a-SM-5P9HW 50-59 years, male 21.1
GTEX-17EVP-0011-R6b-SM-7LT99 40-49 years, male 20.8
GTEX-1LH75-0011-R6a-SM-EXURS 50-59 years, female 20.8
GTEX-1GMR8-0011-R6b-SM-CE6RC 50-59 years, female 20.7
GTEX-NL4W-0011-R6a-SM-2I3GA 50-59 years, male 20.6
GTEX-15ER7-0011-R6a-SM-6M46M 20-29 years, female 20.5
GTEX-1H1CY-0011-R6b-SM-CE6RP 60-69 years, female 20.5
GTEX-1C6VR-0011-R6a-SM-7MXU8 60-69 years, male 20.4
GTEX-13JUV-0011-R6b-SM-5LZYG 40-49 years, female 20.3
GTEX-R55E-0011-R6A-SM-2TC5T 20-29 years, male 20.2
GTEX-16YQH-0011-R6b-SM-7938T 30-39 years, male 20.1
GTEX-P44G-0011-R6A-SM-2XCD3 30-39 years, male 20.1
GTEX-1H3NZ-0011-R6b-SM-A9G1N 60-69 years, male 20.0
GTEX-UTHO-0011-R6A-SM-3GIJW 60-69 years, male 19.9
GTEX-12ZZW-0011-R6a-SM-5DUVZ 50-59 years, male 19.7
GTEX-145MH-0011-R6a-SM-5PNZ7 50-59 years, male 19.7
GTEX-14ABY-0011-R6a-SM-5PNWR 50-59 years, male 19.7
GTEX-13N2G-0011-R6b-SM-5MR3P 60-69 years, male 19.6
GTEX-14PN4-0011-R6b-SM-69LQU 50-59 years, male 19.3
GTEX-T6MN-0011-R6A-SM-32QP8 50-59 years, male 19.0
GTEX-1IGQW-0011-R6a-SM-CM2TC 60-69 years, male 19.0
GTEX-13QJC-0011-R6a-SM-5S2VI 60-69 years, female 18.8
GTEX-1F6I4-0011-R6a-SM-CE6R4 60-69 years, male 18.5
GTEX-13SLW-0011-R6a-SM-5O9BH 70-79 years, male 18.3
GTEX-17HG3-0011-R6b-SM-79OK8 30-39 years, female 18.1
GTEX-1BAJH-0011-R6b-SM-7MXT2 70-79 years, male 18.1
GTEX-15DCD-0011-R6b-SM-6M46L 70-79 years, female 18.0
GTEX-QVJO-0011-R6A-SM-2S1QN 60-69 years, female 18.0
GTEX-1GMRU-0011-R6b-SM-A9G3B 50-59 years, male 18.0
GTEX-13RTJ-0011-R6a-SM-5SI74 60-69 years, male 17.9
GTEX-13FHP-0011-R6b-SM-5LZY6 50-59 years, male 17.7
GTEX-1B996-0011-R6b-SM-793AQ 60-69 years, male 17.7
GTEX-17HHY-0011-R6b-SM-7189Z 50-59 years, male 17.6
GTEX-15RJE-0011-R6a-SM-7DHL8 40-49 years, male 17.3
GTEX-1N2DW-0011-R6a-SM-EZ6MW 50-59 years, male 17.2
GTEX-1H1ZS-0011-R6b-SM-A9G1F 70-79 years, male 16.9
GTEX-1HT8W-0011-R6a-SM-CM2SY 30-39 years, male 16.9
GTEX-1I19N-0011-R6b-SM-CY8GC 70-79 years, male 16.7
GTEX-14BIM-0011-R6b-SM-5S2VB 60-69 years, female 16.6
GTEX-NPJ8-0011-R6a-SM-2HMKB 40-49 years, male 16.5
GTEX-TSE9-0011-R6A-SM-3DB7L 60-69 years, female 16.5
GTEX-ZVZQ-0011-R6b-SM-57WAY 60-69 years, female 16.5
GTEX-T5JC-0011-R6A-SM-D3L87 20-29 years, male 16.5
GTEX-13FLW-0011-R6b-SM-5L3EN 50-59 years, male 16.4
GTEX-13JVG-0011-R6a-SM-5MR3E 60-69 years, male 16.4
GTEX-17F97-0011-R6a-SM-7EPGS 50-59 years, male 16.4
GTEX-Z93S-0011-R6b-SM-4RGNJ 50-59 years, male 16.4
GTEX-11DZ1-0011-R6b-SM-DNZZG 50-59 years, male 16.4
GTEX-1IL2U-0011-R6a-SM-ARZLG 60-69 years, male 16.4
GTEX-1EMGI-0011-R6a-SM-9OSVR 60-69 years, male 16.2
GTEX-15CHQ-0011-R6b-SM-69LOX 60-69 years, male 15.9
GTEX-1CB4G-0011-R6b-SM-9QEGO 60-69 years, male 15.6
GTEX-X4XY-0011-R6B-SM-46MVB 60-69 years, male 15.4
GTEX-1GZ2Q-0011-R6a-SM-9OSWM 40-49 years, male 15.4
GTEX-1HBPI-0011-R6b-SM-A9G1T 50-59 years, male 15.3
GTEX-1GZHY-0011-R6a-SM-9OSWL 50-59 years, female 15.1
GTEX-1192X-0011-R6a-SM-DNZZB 50-59 years, male 14.7
GTEX-1HBPH-0011-R6a-SM-CKZOV 40-49 years, female 14.6
GTEX-XMD1-0011-R6A-SM-4AT5K 60-69 years, male 14.4
GTEX-1H4P4-0011-R6a-SM-ARZLR 50-59 years, male 14.2
GTEX-1A8G6-0011-R6b-SM-7P8PE 60-69 years, male 13.9
GTEX-1I1HK-0011-R6b-SM-CM2T9 60-69 years, male 13.7
GTEX-1GN2E-0011-R6b-SM-9QEII 60-69 years, male 13.6
GTEX-11ONC-0011-R6a-SM-DO12A 60-69 years, male 12.8
GTEX-14C5O-0011-R6a-SM-5YYB6 60-69 years, male 12.5
GTEX-13PDP-0011-R6b-SM-5O9D5 60-69 years, male 12.4
GTEX-WZTO-0011-R6B-SM-4E3J6 40-49 years, male 12.3
GTEX-17JCI-0011-R6a-SM-72D6D 60-69 years, female 12.0
GTEX-QVUS-0011-R6A-SM-3GACX 60-69 years, female 11.8
GTEX-1HBPM-0011-R6b-SM-ARU73 60-69 years, female 11.8
GTEX-139TT-0011-R6b-SM-5J2ON 60-69 years, male 11.6
GTEX-14E7W-0011-R6b-SM-5ZZV3 70-79 years, male 11.2
GTEX-1LC47-0011-R6b-SM-EZ6MI 60-69 years, male 11.2
GTEX-1E2YA-0011-R6b-SM-CE6R2 50-59 years, male 11.1
GTEX-13G51-0011-R6b-SM-5LZX4 60-69 years, male 10.7
GTEX-1LB8K-0011-R6a-SM-EXURT 50-59 years, male 10.5
GTEX-183WM-0011-R6b-SM-72D66 70-79 years, female 10.3
GTEX-ZVT3-0011-R6a-SM-51MSU 60-69 years, female 10.3
GTEX-1F48J-0011-R6a-SM-CJI2F 50-59 years, female 10.3
GTEX-13OVJ-0011-R6b-SM-5L3GH 50-59 years, female 10.2
GTEX-11TTK-0011-R6b-SM-DNZZW 60-69 years, female 10.2
GTEX-13SLX-0011-R6a-SM-5PNX4 50-59 years, female 9.8
GTEX-13OW8-0011-R6b-SM-5L3I3 60-69 years, male 9.5
GTEX-1C64N-0011-R6a-SM-7IGO9 50-59 years, male 9.3
GTEX-15G19-0011-R6b-SM-7KUM3 60-69 years, male 9.2
GTEX-1EH9U-0011-R6a-SM-CJI2C 60-69 years, male 9.0
GTEX-12584-0011-R6a-SM-5NQ7C 40-49 years, male 8.8
GTEX-11NUK-0011-R6a-SM-DO93O 50-59 years, male 8.5
GTEX-1H3VE-0011-R6b-SM-A9G1M 40-49 years, male 8.5
GTEX-18465-0011-R6a-SM-7LG6M 50-59 years, male 8.4
GTEX-13OW5-0011-R6b-SM-5O9BW 60-69 years, male 8.1
GTEX-X261-0011-R6B-SM-4E3J8 50-59 years, male 8.0
GTEX-T2IS-0011-R6A-SM-32QP2 20-29 years, female 7.7
GTEX-11PRG-0011-R6b-SM-DO923 50-59 years, male 7.6
GTEX-1IKOH-0011-R6b-SM-A9G1W 60-69 years, female 7.5
GTEX-13PL6-0011-R6a-SM-5O9C5 40-49 years, female 7.3
GTEX-15EO6-0011-R6a-SM-7KULK 50-59 years, male 7.2
GTEX-1CB4H-0011-R6b-SM-CKZNK 60-69 years, female 7.1
GTEX-OHPN-0011-R6A-SM-2I5FH 60-69 years, female 7.0
GTEX-ZV68-0011-R6a-SM-51MSR 50-59 years, female 6.9
GTEX-1H23P-0011-R6b-SM-A9G1H 60-69 years, male 6.6
GTEX-1EKGG-0011-R6a-SM-CL538 60-69 years, male 6.5
GTEX-12WSE-0011-R6b-SM-5LZV5 20-29 years, male 6.2
GTEX-16XZZ-0011-R6a-SM-7IGNE 60-69 years, male 6.2
GTEX-13OVH-0011-R6b-SM-5LUAX 70-79 years, male 6.1
GTEX-1EWIQ-0011-R6a-SM-ARU8G 70-79 years, female 6.1
GTEX-S7PM-0011-R6A-SM-3NM8F 60-69 years, male 6.0
GTEX-147F4-0011-R6b-SM-5S2UP 50-59 years, male 5.8
GTEX-16Z82-0011-R6a-SM-7IGLV 60-69 years, male 5.7
GTEX-1445S-0011-R6b-SM-5PNUF 60-69 years, male 5.5
GTEX-1399T-0011-R6b-SM-5K7YL 60-69 years, male 5.3
GTEX-131XW-0011-R6b-SM-5K7XY 50-59 years, female 5.2
GTEX-15DYW-0011-R6b-SM-6PALA 60-69 years, female 5.2
GTEX-YJ89-0011-R6a-SM-4V6GN 60-69 years, male 5.2
GTEX-139TS-0011-R6a-SM-5J2OB 60-69 years, male 5.0
GTEX-13FXS-0011-R6b-SM-5L3F7 50-59 years, male 4.8
GTEX-14753-0011-R6b-SM-5S2UD 60-69 years, male 4.6
GTEX-WL46-0011-R6A-SM-3LK6X 50-59 years, male 4.5
GTEX-1F75B-0011-R6a-SM-ARZMI 50-59 years, male 4.4
GTEX-PWO3-0011-R6A-SM-2I5F3 60-69 years, female 4.2
GTEX-1H3O1-0011-R6b-SM-CL54U 60-69 years, male 4.1
GTEX-1C6WA-0011-R6a-SM-7PBYP 60-69 years, male 4.0
GTEX-1HFI6-0011-R6b-SM-CM2SR 40-49 years, male 3.6
GTEX-ZE7O-0011-R6a-SM-57WCI 50-59 years, female 3.2
GTEX-QDT8-0011-R6A-SM-32PKI 30-39 years, female 3.1
GTEX-14PHW-0011-R6b-SM-5YYAR 60-69 years, female 2.6
GTEX-ZUA1-0011-R6b-SM-4YCDD 40-49 years, male 2.5
GTEX-ZAB4-0011-R6a-SM-4SOKD 40-49 years, male 2.2
GTEX-1RLM8-0011-R6a-SM-EYYXS 50-59 years, male 2.2
GTEX-1EN7A-0011-R6b-SM-9QEHW 40-49 years, male 2.0
GTEX-P44H-0011-R6A-SM-2XCF3 40-49 years, male 1.5
GTEX-13N1W-0011-R6a-SM-5MR43 70-79 years, male 1.4
GTEX-145MI-0011-R6a-SM-5PNZA 60-69 years, female 1.3
GTEX-11DYG-0011-R6a-SM-DO936 60-69 years, male 1.3
GTEX-11GSP-0011-R6b-SM-57WBQ 60-69 years, female 1.2
GTEX-YFC4-0011-R6b-SM-4V6E1 40-49 years, female 1.0
GTEX-11DXW-0011-R6a-SM-DO11N 40-49 years, male 0.8
GTEX-1CB4J-0011-R6b-SM-9WG7B 60-69 years, male 0.8
GTEX-ZF28-0011-R6a-SM-4WKHI 60-69 years, male 0.7
GTEX-12WSD-0011-R6b-SM-5P9JU 60-69 years, female 0.6
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Brain - Putamen (basal ganglia)
Average nTPM: 18.8
Samples: 205

Max nTPM: 60.1
Min nTPM: 1.9
Std nTPM: 10.8
Median nTPM: 17.7
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 60.1
GTEX-S7SE-0011-R7A-SM-2XCDI 50-59 years, male 50.5
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 48.3
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 41.6
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 40.8
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 38.9
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 38.8
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 37.9
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 37.7
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 36.7
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 36.1
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 35.7
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 35.6
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 35.0
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 34.7
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 34.5
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 34.4
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 34.1
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 33.8
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 33.4
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 33.1
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 33.0
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 32.9
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 32.8
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 32.7
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 32.6
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 32.2
GTEX-P44G-0011-R7A-SM-2I3F9 30-39 years, male 31.9
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 31.8
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 31.6
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 31.6
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 31.4
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 30.9
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 30.9
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 30.7
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 30.7
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 30.4
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 30.3
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 30.1
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 29.7
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 29.5
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 29.4
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 29.1
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 28.5
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 28.1
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 27.9
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 27.4
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 27.2
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 27.1
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 27.0
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 27.0
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 26.3
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 26.0
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 25.7
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 25.7
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 25.5
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 25.2
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 24.8
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 24.8
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 24.6
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 24.6
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 24.5
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 24.4
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 23.8
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 23.8
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 23.6
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 23.2
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 23.1
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 23.1
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 23.1
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 22.9
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 22.7
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 22.5
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 22.4
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 22.3
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 22.3
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 22.2
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 21.9
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 21.8
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 21.5
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 21.1
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 21.1
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 20.9
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 20.8
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 20.4
GTEX-QVJO-0011-R7A-SM-2S1QO 60-69 years, female 20.3
GTEX-1J1OQ-0011-R7b-SM-ARU87 40-49 years, female 20.3
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 20.2
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 19.8
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 19.7
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 19.5
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 19.5
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 19.2
GTEX-N7MS-0011-R7a-SM-2HMKN 60-69 years, male 18.9
GTEX-1IOXB-0011-R7b-SM-CE6SM 50-59 years, male 18.9
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 18.7
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 18.7
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 18.6
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 18.5
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 17.8
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 17.8
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 17.7
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 17.7
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 17.6
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 17.5
GTEX-18464-0011-R7b-SM-731CM 50-59 years, male 17.2
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 17.1
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 17.0
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 16.9
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 16.3
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 16.2
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 16.1
GTEX-R55E-0011-R7A-SM-2TC5Z 20-29 years, male 16.1
GTEX-TSE9-0011-R7A-SM-3DB7P 60-69 years, female 16.1
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 15.8
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 15.8
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 15.7
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 15.5
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 15.2
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 14.9
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 14.8
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 14.5
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 14.5
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 14.2
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 14.0
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 14.0
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 14.0
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 14.0
GTEX-OHPN-0011-R7A-SM-2I5FI 60-69 years, female 13.9
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 13.8
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 13.6
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 13.2
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 13.2
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 13.1
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 13.1
GTEX-RU72-0011-R7A-SM-2TF5U 50-59 years, female 12.9
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 12.5
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 12.4
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 12.2
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 12.2
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 12.0
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 11.7
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 11.4
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 11.4
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 11.3
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 11.3
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 10.9
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 10.8
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 10.7
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 10.5
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 10.4
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 10.4
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 9.4
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 9.4
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 9.1
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 9.0
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 8.9
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 8.7
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 8.7
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 8.5
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 8.5
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 8.3
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 8.3
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 7.9
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 7.8
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 7.7
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 7.6
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 7.5
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 7.0
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 7.0
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 6.9
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 6.7
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 6.6
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 6.6
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 6.5
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 6.3
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 6.3
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 6.2
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 6.2
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 6.1
GTEX-NL3H-0011-R7a-SM-2I3G5 60-69 years, male 5.9
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 5.7
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 5.4
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 5.4
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 5.3
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 5.2
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 5.1
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 4.9
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 4.9
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 4.8
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 4.7
GTEX-NPJ8-0011-R7a-SM-2HMJV 40-49 years, male 4.7
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 4.7
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 4.7
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 4.6
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 4.5
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 4.1
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 3.9
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 3.9
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 3.9
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 3.7
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 3.2
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 2.3
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 2.1
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 1.9
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BASAL GANGLIA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

3.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 3.4
FF:10164-103B2 76 years, female 3.4
Nucleus accumbens
Scaled Tags Per Million: 2.1
FF:10037-101F1 23-56 years, mixed 2.1
Putamen
Scaled Tags Per Million: 3.1
FF:10176-103C5 60 years, female 3.1
Globus pallidus
Scaled Tags Per Million: 1.3
FF:10175-103C4 60 years, female 1.5
FF:10161-103A8 76 years, female 1.0

BASAL GANGLIA - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

21.1
Pig sample Sample description nTPM
Caudate
nTPM: 21.1
Samples: 4

Max nTPM: 27.7
Min nTPM: 13.8
Sample A Female 13.8
Sample B Female 22.3
Sample C Male 27.7
Sample D Male 20.7
Putamen
nTPM: 18.1
Samples: 4

Max nTPM: 24.0
Min nTPM: 6.7
Sample A Female 6.7
Sample B Female 18.3
Sample C Male 23.3
Sample D Male 24.0
Septum
nTPM: 4.1
Samples: 4

Max nTPM: 7.7
Min nTPM: 0.5
Sample A Female 6.5
Sample B Female 7.7
Sample C Male 1.6
Sample D Male 0.5
Ventral pallidum
nTPM: 10.3
Samples: 4

Max nTPM: 12.8
Min nTPM: 4.5
Sample A Female 11.9
Sample B Female 12.8
Sample C Male 4.5
Sample D Male 11.9

BASAL GANGLIA - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

40.1
Mouse sample Sample description nTPM
Caudate putamen
nTPM: 40.1
Samples: 4

Max nTPM: 45.3
Min nTPM: 33.6
Sample A Male 44.0
Sample B Male 45.3
Sample C Female 33.6
Sample D Female 37.5
Septum
nTPM: 19.0
Samples: 4

Max nTPM: 27.7
Min nTPM: 14.8
Sample A Male 27.7
Sample B Male 15.1
Sample C Female 18.3
Sample D Female 14.8
Ventral forebrain
nTPM: 30.7
Samples: 4

Max nTPM: 33.1
Min nTPM: 25.9
Sample A Male 31.4
Sample B Male 25.9
Sample C Female 33.1
Sample D Female 32.3

BASAL GANGLIA - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

1.3
Allen experiment id Experiment description Expression energy
Striatum
Expression energy: 1.3
68798127 Antisense, RP_050215_01_G10, Mouse strain C57BL/6J (56 days, male) 1.6
71064219 Antisense, RP_050725_03_D08, Mouse strain C57BL/6J (56 days, male) 1.0
Pallidum
Expression energy: 0.5
68798127 Antisense, RP_050215_01_G10, Mouse strain C57BL/6J (56 days, male) 0.8
71064219 Antisense, RP_050725_03_D08, Mouse strain C57BL/6J (56 days, male) 0.2

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