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BRAIN BASAL GANGLIA Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS MEDULLA OBLONGATA
MIDBRAIN OLFACTORY BULB PITUITARY GLAND PONS RETINA SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
AND
VALIDATION
Brain proteome
Basal ganglia
BASAL GANGLIA - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glial cells: Low
Neuronal cells: High
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:154.6 nTPM
HPA Brain:130.5 nTPM
GTEx:154.6 nTPM
FANTOM5:313.6 Scaled Tags Per Million
Pig:123.5 nTPM
Mouse:255.8 nTPM
Allen mouse:18.3 Expression energy

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA018156Antibody HPA048998Antibody CAB000457
Glial cells MediumLowNot detected
Neuronal cells MediumHighNot detected






BASAL GANGLIA - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

130.5
Sample id Sample description nTPM
Caudate nucleus
nTPM: 105.1
2846 Female, age 79, unknown 132.7
2481 Female, age 94, left hemisphere 122.1
1857 Female, age 85, left hemisphere 114.7
1854 Male, age 80, left hemisphere 111.4
2290 Female, age 72, unknown 105.1
1781 Male, age 74, unknown 99.2
2289 Male, age 61, right hemisphere 78.5
2288 Male, age 75, left hemisphere 76.8
Globus pallidus, externus
nTPM: 130.5
2395 Male, age 75, both hemispheres 248.8
2772 Female, age 79, unknown 127.5
1996 Male, age 80, right hemisphere 124.6
2646 Male, age 61, right hemisphere 80.9
2567 Female, age 72, unknown 70.8
Globus pallidus, internus
nTPM: 101.0
2037 Male, age 80, right hemisphere 121.5
2483 Female, age 94, right hemisphere 121.1
2778 Female, age 91, both hemispheres 103.5
1818 Male, age 74, unknown 103.1
2566 Female, age 72, unknown 89.2
2287 Male, age 75, right hemisphere 85.6
2111 Female, age 85, right hemisphere 82.7
Nucleus accumbens
nTPM: 100.2
1856 Female, age 91, right hemisphere 127.1
1806 Female, age 85, left hemisphere 115.9
2732 Male, age 80, right hemisphere 110.8
1783 Male, age 74, unknown 110.3
2698 Female, age 72, unknown 99.8
2391 Female, age 94, left hemisphere 90.1
2286 Male, age 75, left hemisphere 83.9
2824 Male, age 61, right hemisphere 63.5
Nucleus basalis of Meynert
nTPM: 108.7
2821 Male, age 75, both hemispheres 127.8
2393 Male, age 80, right hemisphere 116.5
2484 Female, age 94, left hemisphere 112.4
2569 Male, age 61, both hemispheres 77.9
Nucleus of the diagonal band
nTPM: 107.9
1812 Female, age 91, both hemispheres 136.6
2775 Male, age 80, right hemisphere 112.6
2195 Female, age 85, both hemispheres 107.0
1979 Male, age 74, unknown 102.6
2029 Male, age 61, right hemisphere 80.9
Putamen
nTPM: 111.5
2466 Female, age 79, unknown 156.8
2482 Female, age 94, left hemisphere 129.0
2489 Female, age 72, unknown 113.5
1937 Female, age 91, right hemisphere 112.9
1829 Male, age 74, unknown 104.9
1838 Male, age 80, right hemisphere 90.0
2647 Male, age 75, left hemisphere 73.3
Septal nuclei
nTPM: 116.0
2031 Female, age 72, unknown 137.4
1960 Male, age 74, unknown 134.0
2009 Female, age 91, both hemispheres 122.2
2199 Male, age 80, right hemisphere 115.6
2059 Female, age 85, both hemispheres 104.4
2394 Male, age 61, left hemisphere 100.8
2629 Female, age 94, right hemisphere 97.4
Stria terminalis, bed nucleus
nTPM: 106.5
1974 Female, age 91, both hemispheres 112.3
2201 Male, age 74, unknown 104.6
2486 Female, age 94, both hemispheres 102.7

BASAL GANGLIA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

154.6
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 152.8
Samples: 246

Max nTPM: 550.9
Min nTPM: 81.1
Std nTPM: 49.4
Median nTPM: 145.9
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 550.9
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 357.1
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 327.3
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 290.6
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 275.5
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 269.9
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 267.9
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 266.0
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 264.0
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 261.4
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 258.5
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 232.0
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 229.1
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 225.9
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 225.3
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 221.1
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 220.8
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 219.0
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 214.4
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 212.1
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 207.0
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 205.4
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 205.2
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 203.8
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 202.9
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 202.8
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 201.0
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 199.8
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 198.6
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 194.5
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 193.3
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 193.0
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 192.7
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 190.7
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 190.7
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 190.6
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 189.4
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 188.4
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 187.1
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 186.7
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 184.4
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 181.8
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 181.8
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 181.7
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 181.0
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 179.7
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 179.3
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 178.4
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 177.7
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 177.6
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 177.5
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 176.5
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 176.3
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 175.5
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 174.9
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 174.8
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 174.5
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 174.4
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 173.3
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 172.8
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 171.9
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 171.3
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 170.7
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 169.9
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 169.6
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 169.1
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 169.0
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 168.7
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 168.6
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 168.1
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 168.0
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 167.6
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 165.5
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 164.7
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 164.6
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 163.5
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 163.3
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 163.2
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 163.1
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 162.5
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 162.1
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 161.3
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 160.8
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 160.4
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 160.0
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 159.8
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 159.6
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 159.4
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 158.9
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 157.1
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 156.9
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 156.9
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 156.7
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 156.4
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 156.2
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 156.1
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 156.0
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 156.0
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 155.6
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 155.2
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 155.0
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 153.9
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 153.6
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 152.4
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 152.1
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 151.5
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 151.5
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 150.9
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 150.1
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 150.0
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 149.9
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 149.4
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 148.9
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 148.5
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 148.3
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 147.9
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 147.7
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 146.9
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 146.9
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 146.8
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 146.4
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 146.2
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 146.2
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 145.7
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 145.2
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 143.2
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 142.3
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 141.1
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 140.1
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 139.9
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 139.8
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 139.8
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 139.1
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 138.9
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 138.6
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 138.2
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 137.9
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 137.7
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 137.3
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 137.2
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 137.0
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 136.9
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 136.7
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 136.3
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 135.7
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 135.5
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 135.5
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 135.2
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 134.3
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 133.8
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 133.7
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 133.6
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 133.6
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 133.1
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 133.0
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 132.8
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 132.8
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 132.7
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 132.3
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 132.1
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 132.1
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 132.0
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 131.9
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 131.7
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 130.4
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 130.3
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 129.7
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 129.6
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 129.0
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 127.8
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 127.7
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 127.4
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 126.6
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 126.1
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 125.8
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 125.3
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 125.2
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 125.0
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 124.8
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 124.6
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 123.9
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 123.6
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 123.4
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 123.3
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 123.1
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 122.9
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 122.6
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 121.6
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 121.3
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 121.2
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 121.0
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 119.7
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 119.7
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 119.3
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 118.5
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 118.3
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 117.9
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 117.9
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 117.8
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 117.8
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 117.4
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 116.9
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 116.8
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 116.4
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 115.8
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 115.6
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 115.6
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 115.5
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 115.2
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 115.1
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 115.0
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 114.9
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 113.9
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 113.9
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 112.8
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 111.0
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 108.8
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 108.7
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 108.3
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 107.8
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 106.9
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 105.2
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 105.2
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 101.3
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 100.9
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 100.8
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 99.1
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 99.1
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 99.0
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 98.4
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 96.8
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 95.7
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 94.1
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 93.8
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 93.8
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 93.3
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 92.4
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 92.2
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 91.3
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 90.0
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 88.8
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 87.7
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 86.4
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 85.8
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 84.9
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 81.1
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Brain - Nucleus accumbens (basal ganglia)
Average nTPM: 145.8
Samples: 246

Max nTPM: 356.4
Min nTPM: 57.1
Std nTPM: 44.3
Median nTPM: 141.9
GTEX-X4EP-0011-R6A-SM-3P629 60-69 years, female 356.4
GTEX-1HB9E-0011-R6b-SM-A9G1P 50-59 years, male 344.1
GTEX-14PN4-0011-R6b-SM-69LQU 50-59 years, male 277.1
GTEX-1GN1U-0011-R6a-SM-CKZNO 50-59 years, female 276.5
GTEX-14C5O-0011-R6a-SM-5YYB6 60-69 years, male 273.7
GTEX-1LVAO-0011-R6b-SM-EZ6MX 60-69 years, male 258.9
GTEX-WHSE-0011-R6A-SM-3P5ZP 20-29 years, male 250.2
GTEX-X585-0011-R6A-SM-46MVJ 50-59 years, male 250.2
GTEX-PWO3-0011-R6A-SM-2I5F3 60-69 years, female 243.7
GTEX-1CB4J-0011-R6b-SM-9WG7B 60-69 years, male 238.0
GTEX-132Q8-0011-R6a-SM-5K7YN 60-69 years, male 237.0
GTEX-1GN73-0011-R6b-SM-CJI2T 60-69 years, male 235.5
GTEX-13N2G-0011-R6b-SM-5MR3P 60-69 years, male 234.5
GTEX-1B933-0011-R6b-SM-79OOQ 50-59 years, female 227.3
GTEX-13NYS-0011-R6b-SM-5MR3R 60-69 years, male 213.7
GTEX-13X6K-0011-R6a-SM-5P9K6 60-69 years, female 212.5
GTEX-T5JC-0011-R6A-SM-D3L87 20-29 years, male 211.2
GTEX-XLM4-0011-R6A-SM-4AT4B 60-69 years, male 203.7
GTEX-1F75A-0011-R6b-SM-9QEHD 50-59 years, male 202.8
GTEX-11DZ1-0011-R6b-SM-DNZZG 50-59 years, male 201.8
GTEX-XMD1-0011-R6A-SM-4AT5K 60-69 years, male 197.1
GTEX-1ICLZ-0011-R6b-SM-A9G3A 60-69 years, male 196.8
GTEX-Q2AG-0011-R6A-SM-2HML7 40-49 years, female 194.8
GTEX-1AX9I-0011-R6a-SM-7P8PK 60-69 years, male 193.8
GTEX-18464-0011-R6a-SM-731CA 50-59 years, male 193.5
GTEX-1A3MX-0011-R6a-SM-7P8S9 60-69 years, male 191.5
GTEX-145MH-0011-R6a-SM-5PNZ7 50-59 years, male 190.9
GTEX-15RJE-0011-R6a-SM-7DHL8 40-49 years, male 190.6
GTEX-1I1CD-0011-R6b-SM-CJI3Y 60-69 years, female 190.0
GTEX-13OVJ-0011-R6b-SM-5L3GH 50-59 years, female 189.2
GTEX-13VXU-0011-R6a-SM-5SI71 50-59 years, male 188.5
GTEX-NL3H-0011-R6a-SM-2I3G8 60-69 years, male 186.6
GTEX-16YQH-0011-R6b-SM-7938T 30-39 years, male 186.4
GTEX-NPJ8-0011-R6a-SM-2HMKB 40-49 years, male 186.2
GTEX-1MJK2-0011-R6a-SM-EXUS3 50-59 years, male 185.9
GTEX-QVUS-0011-R6A-SM-3GACX 60-69 years, female 184.8
GTEX-14BIM-0011-R6b-SM-5S2VB 60-69 years, female 184.0
GTEX-13O3Q-0011-R6a-SM-5KM2V 50-59 years, male 183.6
GTEX-1B996-0011-R6b-SM-793AQ 60-69 years, male 183.5
GTEX-1F7RK-0011-R6b-SM-ARZMG 20-29 years, female 183.4
GTEX-1B8L1-0011-R6b-SM-7P8SU 60-69 years, male 183.3
GTEX-11O72-0011-R6a-SM-DNZZQ 40-49 years, male 183.0
GTEX-1JMLX-0011-R6b-SM-EXUT9 50-59 years, male 182.8
GTEX-1LH75-0011-R6a-SM-EXURS 50-59 years, female 180.8
GTEX-13OW5-0011-R6b-SM-5O9BW 60-69 years, male 178.7
GTEX-145MI-0011-R6a-SM-5PNZA 60-69 years, female 177.8
GTEX-1R46S-0011-R6a-SM-EZ6N6 60-69 years, female 177.1
GTEX-14BIN-0011-R6a-SM-5S2RH 50-59 years, female 176.8
GTEX-1EX96-0011-R6a-SM-9OSVV 50-59 years, male 175.5
GTEX-145LS-0011-R6b-SM-5PNWL 60-69 years, female 174.3
GTEX-13RTJ-0011-R6a-SM-5SI74 60-69 years, male 172.6
GTEX-17EVP-0011-R6b-SM-7LT99 40-49 years, male 172.5
GTEX-15CHQ-0011-R6b-SM-69LOX 60-69 years, male 172.2
GTEX-11TTK-0011-R6b-SM-DNZZW 60-69 years, female 171.6
GTEX-14E7W-0011-R6b-SM-5ZZV3 70-79 years, male 169.7
GTEX-15ER7-0011-R6a-SM-6M46M 20-29 years, female 169.7
GTEX-12WSD-0011-R6b-SM-5P9JU 60-69 years, female 169.5
GTEX-13OVL-0011-R6a-SM-5L3G4 50-59 years, male 169.1
GTEX-X261-0011-R6B-SM-4E3J8 50-59 years, male 168.8
GTEX-1IDJH-0011-R6a-SM-A9SLZ 70-79 years, male 168.8
GTEX-17MF6-0011-R6b-SM-7LG6G 40-49 years, male 168.0
GTEX-1F75W-0011-R6a-SM-9QEI5 60-69 years, male 167.8
GTEX-13JVG-0011-R6a-SM-5MR3E 60-69 years, male 167.6
GTEX-1C6WA-0011-R6a-SM-7PBYP 60-69 years, male 166.5
GTEX-1EKGG-0011-R6a-SM-CL538 60-69 years, male 164.8
GTEX-14BMV-0011-R6b-SM-5YY9I 50-59 years, male 164.6
GTEX-QVJO-0011-R6A-SM-2S1QN 60-69 years, female 164.6
GTEX-1GTWX-0011-R6a-SM-A96RN 60-69 years, male 164.0
GTEX-1E1VI-0011-R6a-SM-9OSVJ 50-59 years, male 163.9
GTEX-12ZZX-0011-R6a-SM-5HL8L 40-49 years, female 163.1
GTEX-14PJM-0011-R6a-SM-6872G 50-59 years, female 163.1
GTEX-13N1W-0011-R6a-SM-5MR43 70-79 years, male 162.9
GTEX-183WM-0011-R6b-SM-72D66 70-79 years, female 162.5
GTEX-12ZZZ-0011-R6b-SM-5EQ5B 60-69 years, male 161.2
GTEX-1313W-0011-R6a-SM-5K7XO 50-59 years, female 161.0
GTEX-WZTO-0011-R6B-SM-4E3J6 40-49 years, male 160.8
GTEX-1B8SF-0011-R6b-SM-7MXUD 60-69 years, male 160.0
GTEX-1H1DG-0011-R6a-SM-A9SK8 70-79 years, male 160.0
GTEX-1H3NZ-0011-R6b-SM-A9G1N 60-69 years, male 159.9
GTEX-1GZ4I-0011-R6b-SM-9WG77 50-59 years, male 158.8
GTEX-131XH-0011-R6a-SM-5KM2G 50-59 years, male 158.5
GTEX-X4XX-0011-R6B-SM-46MWP 60-69 years, male 158.3
GTEX-R55E-0011-R6A-SM-2TC5T 20-29 years, male 156.8
GTEX-N7MS-0011-R6a-SM-2HMJ4 60-69 years, male 156.6
GTEX-1HT8W-0011-R6a-SM-CM2SY 30-39 years, male 156.5
GTEX-1OJC4-0011-R6a-SM-EXOIM 50-59 years, female 156.2
GTEX-13FLV-0011-R6a-SM-5KLZ4 50-59 years, male 156.1
GTEX-1GF9W-0011-R6b-SM-9QEIE 60-69 years, male 154.4
GTEX-ZDXO-0011-R6a-SM-4WWCT 60-69 years, male 153.3
GTEX-13QJC-0011-R6a-SM-5S2VI 60-69 years, female 153.2
GTEX-14JIY-0011-R6b-SM-68714 60-69 years, male 153.1
GTEX-13O3O-0011-R6b-SM-5P9GY 60-69 years, female 152.9
GTEX-144GO-0011-R6b-SM-5S2V7 60-69 years, male 152.8
GTEX-1F48J-0011-R6a-SM-CJI2F 50-59 years, female 150.9
GTEX-11DXY-0011-R6a-SM-DNZZF 60-69 years, male 150.3
GTEX-TSE9-0011-R6A-SM-3DB7L 60-69 years, female 150.1
GTEX-1HBPM-0011-R6b-SM-ARU73 60-69 years, female 150.1
GTEX-13X6J-0011-R6a-SM-5PNUB 50-59 years, male 149.8
GTEX-12WSF-0011-R6b-SM-5HL8W 70-79 years, male 149.6
GTEX-P44G-0011-R6A-SM-2XCD3 30-39 years, male 149.6
GTEX-OHPN-0011-R6A-SM-2I5FH 60-69 years, female 149.2
GTEX-1GZ2Q-0011-R6a-SM-9OSWM 40-49 years, male 149.2
GTEX-13SLX-0011-R6a-SM-5PNX4 50-59 years, female 149.1
GTEX-14ABY-0011-R6a-SM-5PNWR 50-59 years, male 149.1
GTEX-1192X-0011-R6a-SM-DNZZB 50-59 years, male 149.1
GTEX-11NV4-0011-R6a-SM-57WD5 60-69 years, male 149.0
GTEX-13FLW-0011-R6b-SM-5L3EN 50-59 years, male 148.9
GTEX-1EMGI-0011-R6a-SM-9OSVR 60-69 years, male 148.4
GTEX-1F6IF-0011-R6a-SM-9QEIO 60-69 years, male 148.3
GTEX-13NYB-0011-R6b-SM-5MR51 40-49 years, male 147.9
GTEX-1IY9M-0011-R6a-SM-D4P28 60-69 years, male 147.0
GTEX-11ONC-0011-R6a-SM-DO12A 60-69 years, male 146.7
GTEX-11NUK-0011-R6a-SM-DO93O 50-59 years, male 145.9
GTEX-1445S-0011-R6b-SM-5PNUF 60-69 years, male 145.5
GTEX-14PQA-0011-R6b-SM-6AJAM 50-59 years, female 145.4
GTEX-WWYW-0011-R6A-SM-3NB3G 50-59 years, female 144.6
GTEX-T2IS-0011-R6A-SM-32QP2 20-29 years, female 143.5
GTEX-13OW6-0011-R6b-SM-5L3GR 50-59 years, male 143.1
GTEX-ZUA1-0011-R6b-SM-4YCDD 40-49 years, male 143.0
GTEX-17F97-0011-R6a-SM-7EPGS 50-59 years, male 142.7
GTEX-NPJ7-0011-R6a-SM-2I3G7 60-69 years, female 142.7
GTEX-144GL-0011-R6a-SM-5P9HW 50-59 years, male 142.3
GTEX-18A6Q-0011-R6a-SM-7LG6R 60-69 years, male 142.2
GTEX-1HR9M-0011-R6a-SM-ARU6Z 60-69 years, male 141.5
GTEX-147GR-0011-R6b-SM-5S2RO 60-69 years, male 141.0
GTEX-N7MT-0011-R6a-SM-2I3G3 60-69 years, female 140.1
GTEX-NL4W-0011-R6a-SM-2I3GA 50-59 years, male 139.5
GTEX-12ZZY-0011-R6b-SM-5EGLA 60-69 years, male 139.2
GTEX-1F75B-0011-R6a-SM-ARZMI 50-59 years, male 139.2
GTEX-1F6I4-0011-R6a-SM-CE6R4 60-69 years, male 139.1
GTEX-15DCD-0011-R6b-SM-6M46L 70-79 years, female 138.8
GTEX-1I1GR-0011-R6a-SM-CMKHI 60-69 years, male 138.5
GTEX-15DYW-0011-R6b-SM-6PALA 60-69 years, female 138.4
GTEX-15EO6-0011-R6a-SM-7KULK 50-59 years, male 136.7
GTEX-1J8Q2-0011-R6a-SM-CKZPG 60-69 years, male 136.6
GTEX-ZF28-0011-R6a-SM-4WKHI 60-69 years, male 136.4
GTEX-1GF9V-0011-R6b-SM-CJI2Q 60-69 years, male 136.3
GTEX-1I1GV-0011-R6b-SM-ARU6Q 60-69 years, male 136.2
GTEX-1CB4G-0011-R6b-SM-9QEGO 60-69 years, male 135.3
GTEX-13G51-0011-R6b-SM-5LZX4 60-69 years, male 135.1
GTEX-13112-0011-R6b-SM-5DUVK 50-59 years, male 134.7
GTEX-14JG1-0011-R6b-SM-5YYAU 40-49 years, male 134.7
GTEX-1EH9U-0011-R6a-SM-CJI2C 60-69 years, male 134.6
GTEX-17HG3-0011-R6b-SM-79OK8 30-39 years, female 134.4
GTEX-1JJEA-0011-R6a-SM-EXUS1 60-69 years, male 134.3
GTEX-139TT-0011-R6b-SM-5J2ON 60-69 years, male 134.2
GTEX-1HBPI-0011-R6b-SM-A9G1T 50-59 years, male 134.1
GTEX-ZV68-0011-R6a-SM-51MSR 50-59 years, female 133.9
GTEX-11DYG-0011-R6a-SM-DO936 60-69 years, male 133.6
GTEX-12WSH-0011-R6b-SM-5P9F4 50-59 years, male 133.3
GTEX-12584-0011-R6a-SM-5NQ7C 40-49 years, male 132.8
GTEX-1H1ZS-0011-R6b-SM-A9G1F 70-79 years, male 132.5
GTEX-1H1CY-0011-R6b-SM-CE6RP 60-69 years, female 131.1
GTEX-12WSC-0011-R6b-SM-5LU99 50-59 years, male 130.9
GTEX-UTHO-0011-R6A-SM-3GIJW 60-69 years, male 130.6
GTEX-ZE9C-0011-R6a-SM-4WWCW 60-69 years, male 130.2
GTEX-14LZ3-0011-R6a-SM-D3L8C 60-69 years, female 130.2
GTEX-1GMR8-0011-R6b-SM-CE6RC 50-59 years, female 130.1
GTEX-1C6VR-0011-R6a-SM-7MXU8 60-69 years, male 129.2
GTEX-14PHW-0011-R6b-SM-5YYAR 60-69 years, female 128.5
GTEX-13JUV-0011-R6b-SM-5LZYG 40-49 years, female 128.1
GTEX-Y8DK-0011-R6A-SM-4V6EG 60-69 years, male 127.8
GTEX-139TS-0011-R6a-SM-5J2OB 60-69 years, male 127.2
GTEX-1HGF4-0011-R6a-SM-A96S1 60-69 years, male 127.1
GTEX-11GSP-0011-R6b-SM-57WBQ 60-69 years, female 126.8
GTEX-1399T-0011-R6b-SM-5K7YL 60-69 years, male 126.5
GTEX-16Z82-0011-R6a-SM-7IGLV 60-69 years, male 126.2
GTEX-1GN2E-0011-R6b-SM-9QEII 60-69 years, male 125.6
GTEX-1MA7X-0011-R6a-SM-EYYWR 60-69 years, male 124.8
GTEX-11OF3-0011-R6b-SM-57WBG 60-69 years, male 124.5
GTEX-1I1GQ-0011-R6b-SM-CE6SE 50-59 years, male 123.5
GTEX-WL46-0011-R6A-SM-3LK6X 50-59 years, male 123.3
GTEX-QMR6-0011-R6A-SM-32PKP 50-59 years, male 122.4
GTEX-13OW8-0011-R6b-SM-5L3I3 60-69 years, male 122.3
GTEX-1IKK5-0011-R6b-SM-A9SLY 60-69 years, male 121.6
GTEX-1LVA9-0011-R6a-SM-EYYWH 50-59 years, male 121.6
GTEX-1I19N-0011-R6b-SM-CY8GC 70-79 years, male 121.3
GTEX-ZXG5-0011-R6a-SM-57WBZ 60-69 years, male 121.1
GTEX-Z93S-0011-R6b-SM-4RGNJ 50-59 years, male 120.1
GTEX-1HFI6-0011-R6b-SM-CM2SR 40-49 years, male 120.0
GTEX-1H3VE-0011-R6b-SM-A9G1M 40-49 years, male 117.6
GTEX-1E2YA-0011-R6b-SM-CE6R2 50-59 years, male 117.5
GTEX-ZVZQ-0011-R6b-SM-57WAY 60-69 years, female 117.0
GTEX-147F4-0011-R6b-SM-5S2UP 50-59 years, male 116.9
GTEX-1H4P4-0011-R6a-SM-ARZLR 50-59 years, male 116.8
GTEX-T6MN-0011-R6A-SM-32QP8 50-59 years, male 116.7
GTEX-11PRG-0011-R6b-SM-DO923 50-59 years, male 115.7
GTEX-1HBPH-0011-R6a-SM-CKZOV 40-49 years, female 115.7
GTEX-WVLH-0011-R6A-SM-3MJFZ 50-59 years, male 114.7
GTEX-131XW-0011-R6b-SM-5K7XY 50-59 years, female 114.4
GTEX-S7SE-0011-R6A-SM-2XCD9 50-59 years, male 114.4
GTEX-17HHY-0011-R6b-SM-7189Z 50-59 years, male 112.9
GTEX-16XZZ-0011-R6a-SM-7IGNE 60-69 years, male 112.8
GTEX-1C64N-0011-R6a-SM-7IGO9 50-59 years, male 111.5
GTEX-RU72-0011-R6A-SM-2TF71 50-59 years, female 110.6
GTEX-1A8G6-0011-R6b-SM-7P8PE 60-69 years, male 109.3
GTEX-1IL2U-0011-R6a-SM-ARZLG 60-69 years, male 109.1
GTEX-1IKOH-0011-R6b-SM-A9G1W 60-69 years, female 109.0
GTEX-1CB4H-0011-R6b-SM-CKZNK 60-69 years, female 108.9
GTEX-17JCI-0011-R6a-SM-72D6D 60-69 years, female 108.5
GTEX-1HUB1-0011-R6b-SM-ARU6W 60-69 years, male 108.5
GTEX-13FXS-0011-R6b-SM-5L3F7 50-59 years, male 108.2
GTEX-1LB8K-0011-R6a-SM-EXURT 50-59 years, male 107.6
GTEX-11WQC-0011-R6a-SM-5BC77 60-69 years, male 107.2
GTEX-1RLM8-0011-R6a-SM-EYYXS 50-59 years, male 106.7
GTEX-13S7M-0011-R6b-SM-5O9D8 60-69 years, female 106.1
GTEX-1H3O1-0011-R6b-SM-CL54U 60-69 years, male 105.8
GTEX-145LU-0011-R6a-SM-5S2V6 50-59 years, male 105.2
GTEX-13IVO-0011-R6b-SM-5K7X9 70-79 years, male 104.5
GTEX-17EVQ-0011-R6a-SM-7189U 70-79 years, male 100.5
GTEX-18465-0011-R6a-SM-7LG6M 50-59 years, male 98.8
GTEX-13PL6-0011-R6a-SM-5O9C5 40-49 years, female 98.6
GTEX-12WSE-0011-R6b-SM-5LZV5 20-29 years, male 98.3
GTEX-S7PM-0011-R6A-SM-3NM8F 60-69 years, male 97.8
GTEX-13OVH-0011-R6b-SM-5LUAX 70-79 years, male 97.7
GTEX-13SLW-0011-R6a-SM-5O9BH 70-79 years, male 97.6
GTEX-11DXW-0011-R6a-SM-DO11N 40-49 years, male 96.2
GTEX-12ZZW-0011-R6a-SM-5DUVZ 50-59 years, male 95.3
GTEX-1I1GS-0011-R6b-SM-CMKHE 60-69 years, male 94.1
GTEX-13FHO-0011-R6b-SM-5LZX1 60-69 years, male 93.8
GTEX-P44H-0011-R6A-SM-2XCF3 40-49 years, male 93.8
GTEX-14ASI-0011-R6a-SM-5S2UZ 60-69 years, male 93.3
GTEX-1F88E-0011-R6a-SM-CKZNW 60-69 years, female 92.2
GTEX-ZE7O-0011-R6a-SM-57WCI 50-59 years, female 91.9
GTEX-ZAB4-0011-R6a-SM-4SOKD 40-49 years, male 91.2
GTEX-YFC4-0011-R6b-SM-4V6E1 40-49 years, female 91.1
GTEX-1J1OQ-0011-R6a-SM-ARU86 40-49 years, female 91.1
GTEX-ZVT3-0011-R6a-SM-51MSU 60-69 years, female 90.3
GTEX-1N2DW-0011-R6a-SM-EZ6MW 50-59 years, male 89.3
GTEX-1LC47-0011-R6b-SM-EZ6MI 60-69 years, male 88.8
GTEX-1H23P-0011-R6b-SM-A9G1H 60-69 years, male 88.7
GTEX-13FHP-0011-R6b-SM-5LZY6 50-59 years, male 87.2
GTEX-1GZHY-0011-R6a-SM-9OSWL 50-59 years, female 85.9
GTEX-1EWIQ-0011-R6a-SM-ARU8G 70-79 years, female 85.8
GTEX-12WSM-0011-R6b-SM-5EQ6N 60-69 years, male 85.5
GTEX-14753-0011-R6b-SM-5S2UD 60-69 years, male 85.0
GTEX-15G19-0011-R6b-SM-7KUM3 60-69 years, male 84.5
GTEX-1GMRU-0011-R6b-SM-A9G3B 50-59 years, male 82.9
GTEX-1EN7A-0011-R6b-SM-9QEHW 40-49 years, male 79.6
GTEX-1I1HK-0011-R6b-SM-CM2T9 60-69 years, male 76.5
GTEX-13PDP-0011-R6b-SM-5O9D5 60-69 years, male 75.8
GTEX-1BAJH-0011-R6b-SM-7MXT2 70-79 years, male 72.0
GTEX-1IGQW-0011-R6a-SM-CM2TC 60-69 years, male 71.8
GTEX-QDT8-0011-R6A-SM-32PKI 30-39 years, female 68.1
GTEX-YJ89-0011-R6a-SM-4V6GN 60-69 years, male 67.0
GTEX-X4XY-0011-R6B-SM-46MVB 60-69 years, male 57.1
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Brain - Putamen (basal ganglia)
Average nTPM: 154.6
Samples: 205

Max nTPM: 409.0
Min nTPM: 71.5
Std nTPM: 50.2
Median nTPM: 143.8
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 409.0
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 350.8
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 315.8
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 313.0
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 302.8
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 280.1
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 278.1
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 270.9
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 269.4
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 267.1
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 260.7
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 254.5
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 240.6
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 234.5
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 232.1
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 231.9
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 227.3
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 223.1
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 223.0
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 223.0
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 220.6
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 213.7
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 211.1
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 209.3
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 208.7
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 208.6
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 207.3
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 203.0
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 201.6
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 197.4
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 195.8
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 194.2
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 189.4
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 188.6
GTEX-NPJ8-0011-R7a-SM-2HMJV 40-49 years, male 187.2
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 185.3
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 184.3
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 183.7
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 182.9
GTEX-NL3H-0011-R7a-SM-2I3G5 60-69 years, male 181.1
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 179.1
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 178.0
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 176.2
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 175.7
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 175.6
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 174.5
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 174.1
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 173.7
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 172.7
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 172.1
GTEX-R55E-0011-R7A-SM-2TC5Z 20-29 years, male 171.7
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 171.3
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 171.0
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 170.6
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 170.6
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 170.1
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 169.7
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 169.1
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 168.6
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 166.7
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 165.4
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 165.0
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 164.7
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 164.7
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 164.0
GTEX-S7SE-0011-R7A-SM-2XCDI 50-59 years, male 163.2
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 162.2
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 162.1
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 161.7
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 161.4
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 161.2
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 160.8
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 160.2
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 159.2
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 158.3
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 157.3
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 156.7
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 156.7
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 156.5
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 155.0
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 154.6
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 154.1
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 153.6
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 153.4
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 152.7
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 152.1
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 151.8
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 151.3
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 150.5
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 149.1
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 149.0
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 149.0
GTEX-P44G-0011-R7A-SM-2I3F9 30-39 years, male 148.9
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 148.4
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 147.6
GTEX-OHPN-0011-R7A-SM-2I5FI 60-69 years, female 146.3
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 145.9
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 145.7
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 145.4
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 144.3
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 144.2
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 143.8
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 143.8
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 143.6
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 143.4
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 143.0
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 142.9
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 142.7
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 142.7
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 142.4
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 141.6
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 141.3
GTEX-QVJO-0011-R7A-SM-2S1QO 60-69 years, female 140.8
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 140.8
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 140.0
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 140.0
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 139.7
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 139.3
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 139.1
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 138.8
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 138.2
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 138.0
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 137.5
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 137.4
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 137.3
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 137.0
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 136.9
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 136.4
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 136.0
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 135.3
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 134.9
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 134.8
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 133.7
GTEX-N7MS-0011-R7a-SM-2HMKN 60-69 years, male 133.0
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 132.9
GTEX-TSE9-0011-R7A-SM-3DB7P 60-69 years, female 132.5
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 132.0
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 131.3
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 131.3
GTEX-1J1OQ-0011-R7b-SM-ARU87 40-49 years, female 130.5
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 129.1
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 129.1
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 129.0
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 127.4
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 127.2
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 127.1
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 126.9
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 126.2
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 125.5
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 124.9
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 124.9
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 124.5
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 123.8
GTEX-1IOXB-0011-R7b-SM-CE6SM 50-59 years, male 123.4
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 123.1
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 122.0
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 121.1
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 120.5
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 120.2
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 119.1
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 118.3
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 118.1
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 117.9
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 117.0
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 116.1
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 116.1
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 116.0
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 115.9
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 115.9
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 115.8
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 115.7
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 114.6
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 114.1
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 113.1
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 111.5
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 111.3
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 111.2
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 110.8
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 110.6
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 109.8
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 107.5
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 106.4
GTEX-RU72-0011-R7A-SM-2TF5U 50-59 years, female 105.4
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 105.4
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 104.3
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 103.8
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 103.6
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 101.0
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 100.4
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 99.3
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 98.9
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 98.6
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 97.5
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 97.1
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 92.9
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 92.9
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 90.9
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 87.8
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 84.2
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 82.9
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 80.4
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 80.3
GTEX-18464-0011-R7b-SM-731CM 50-59 years, male 79.9
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 79.2
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 71.5
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BASAL GANGLIA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

313.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 203.0
FF:10164-103B2 76 years, female 203.0
Nucleus accumbens
Scaled Tags Per Million: 198.3
FF:10037-101F1 23-56 years, mixed 198.3
Putamen
Scaled Tags Per Million: 202.3
FF:10176-103C5 60 years, female 202.3
Globus pallidus
Scaled Tags Per Million: 313.6
FF:10175-103C4 60 years, female 342.9
FF:10161-103A8 76 years, female 284.4

BASAL GANGLIA - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

123.5
Pig sample Sample description nTPM
Caudate
nTPM: 104.5
Samples: 4

Max nTPM: 126.7
Min nTPM: 82.7
Sample A Female 82.7
Sample B Female 107.5
Sample C Male 126.7
Sample D Male 101.1
Putamen
nTPM: 123.5
Samples: 4

Max nTPM: 148.3
Min nTPM: 97.5
Sample A Female 110.8
Sample B Female 97.5
Sample C Male 148.3
Sample D Male 137.5
Septum
nTPM: 112.1
Samples: 4

Max nTPM: 143.7
Min nTPM: 97.1
Sample A Female 108.8
Sample B Female 98.7
Sample C Male 143.7
Sample D Male 97.1
Ventral pallidum
nTPM: 108.1
Samples: 4

Max nTPM: 140.9
Min nTPM: 88.0
Sample A Female 88.0
Sample B Female 102.5
Sample C Male 140.9
Sample D Male 101.0

BASAL GANGLIA - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

255.8
Mouse sample Sample description nTPM
Caudate putamen
nTPM: 255.8
Samples: 4

Max nTPM: 262.3
Min nTPM: 241.2
Sample A Male 260.8
Sample B Male 262.3
Sample C Female 241.2
Sample D Female 258.9
Septum
nTPM: 232.3
Samples: 4

Max nTPM: 242.3
Min nTPM: 223.6
Sample A Male 223.6
Sample B Male 242.3
Sample C Female 235.7
Sample D Female 227.7
Ventral forebrain
nTPM: 216.3
Samples: 4

Max nTPM: 234.1
Min nTPM: 202.4
Sample A Male 202.4
Sample B Male 234.1
Sample C Female 224.9
Sample D Female 203.8

BASAL GANGLIA - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

18.3
Allen experiment id Experiment description Expression energy
Striatum
Expression energy: 18.3
67779877 Antisense, RP_040922_01_E10, Mouse strain C57BL/6J (56 days, male) 22.3
71608217 Antisense, RP_050927_01_C01, Mouse strain C57BL/6J (56 days, male) 14.4
Pallidum
Expression energy: 16.3
67779877 Antisense, RP_040922_01_E10, Mouse strain C57BL/6J (56 days, male) 19.8
71608217 Antisense, RP_050927_01_C01, Mouse strain C57BL/6J (56 days, male) 12.7

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