HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: High
Neuronal cells: High
RNA expressioni
Consensus:179.2 nTPM
HPA Brain:192.5 nTPM
GTEx:179.2 nTPM
FANTOM5:433.7 Scaled Tags Per Million
Pig:169.7 nTPM
Mouse:357.1 nTPM
Allen mouse:8.5 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA007644Antibody CAB004435Antibody CAB016225
Glial cells HighHighHigh
Neuronal cells HighHighHigh







HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 192.5
Sample id Sample description nTPM
Hippocampus
nTPM: 180.7
1898 Male, age 80, left hemisphere 205.3
1911 Female, age 85, right hemisphere 182.9
1855 Male, age 76, left hemisphere 182.5
2621 Female, age 67, right hemisphere 182.1
2529 Female, age 94, left hemisphere 177.7
2148 Female, age 91, left hemisphere 153.4
Dentate gyrus
nTPM: 174.3
2010 Male, age 76, both hemispheres 204.8
1927 Female, age 91, both hemispheres 193.3
2528 Male, age 74, both hemispheres 178.2
2246 Female, age 85, both hemispheres 177.3
2530 Female, age 94, left hemisphere 156.5
2531 Female, age 67, both hemispheres 135.6
Entorhinal gyrus
nTPM: 162.9
1938 Female, age 85, left hemisphere 199.2
2117 Female, age 91, right hemisphere 185.1
2764 Male, age 80, right hemisphere 170.8
1787 Male, age 76, left hemisphere 164.3
2613 Female, age 94, left hemisphere 130.5
2686 Male, age 75, right hemisphere 127.2
Hippocampus, CA1
nTPM: 186.6
2749 Male, age 80, left hemisphere 205.0
1873 Female, age 85, both hemispheres 204.2
2527 Male, age 74, both hemispheres 190.6
2045 Male, age 76, both hemispheres 174.0
2082 Female, age 91, right hemisphere 159.4
Hippocampus, CA2
nTPM: 182.3
2249 Male, age 74, both hemispheres 230.1
1892 Male, age 76, both hemispheres 189.0
1963 Male, age 80, left hemisphere 178.1
1940 Female, age 85, left hemisphere 176.9
2113 Female, age 91, right hemisphere 163.4
2437 Female, age 94, left hemisphere 156.3
Hippocampus, CA3
nTPM: 177.9
2436 Male, age 74, both hemispheres 236.8
1891 Female, age 85, both hemispheres 192.8
1867 Male, age 76, both hemispheres 186.2
2137 Male, age 80, left hemisphere 185.0
2620 Female, age 94, left hemisphere 148.1
2861 Female, age 67, both hemispheres 118.3
Parahippocampal cortex
nTPM: 172.0
1850 Male, age 80, both hemispheres 196.5
1933 Female, age 85, both hemispheres 191.5
1990 Female, age 91, right hemisphere 189.3
2018 Male, age 76, both hemispheres 186.8
2250 Female, age 67, right hemisphere 184.4
2245 Female, age 91, both hemispheres 174.2
2532 Female, age 72, left hemisphere 168.5
2693 Female, age 94, both hemispheres 153.8
2692 Male, age 74, both hemispheres 146.0
2622 Female, age 67, right hemisphere 128.7
Perirhinal gyrus
nTPM: 192.5
1841 Female, age 85, right hemisphere 221.3
1847 Female, age 91, left hemisphere 214.6
1794 Male, age 80, right hemisphere 184.0
2848 Male, age 76, right hemisphere 173.2
2521 Female, age 94, right hemisphere 169.4
Subiculum
nTPM: 184.2
1977 Female, age 85, both hemispheres 196.6
2042 Male, age 76, both hemispheres 195.3
2438 Female, age 94, left hemisphere 187.7
1901 Male, age 80, both hemispheres 185.0
2619 Male, age 74, both hemispheres 175.6
2729 Female, age 91, right hemisphere 165.1

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 179.2
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 179.2
Samples: 197

Max nTPM: 253.4
Min nTPM: 118.1
Std nTPM: 23.9
Median nTPM: 176.1
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 253.4
GTEX-13RTJ-0011-R1a-SM-5O9D9 60-69 years, male 243.2
GTEX-13OW5-0011-R1b-SM-5L3GE 60-69 years, male 239.0
GTEX-UTHO-0011-R1A-SM-3GIJO 60-69 years, male 232.8
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 232.6
GTEX-13QJC-0011-R1b-SM-5S2UU 60-69 years, female 228.8
GTEX-12ZZX-0011-R1a-SM-5EQ6B 40-49 years, female 226.8
GTEX-1LB8K-0011-R1b-SM-EZ6MV 50-59 years, male 225.9
GTEX-13NZA-0011-R1b-SM-5LUAF 60-69 years, male 223.8
GTEX-13NZ8-0011-R1b-SM-5KM3V 60-69 years, female 222.8
GTEX-17EVP-0011-R1a-SM-7DHLA 40-49 years, male 220.4
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 433.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 433.7
FF:10169-103B7 60 years, female 515.1
FF:10153-102I9 76 years, female 352.2

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 169.7
Pig sample Sample description nTPM
Subiculum
nTPM: 152.2
Samples: 4

Max nTPM: 179.8
Min nTPM: 138.9
Sample A Female 179.8
Sample B Female 148.5
Sample C Male 138.9
Sample D Male 141.4
Dorsal hippocampus
nTPM: 169.7
Samples: 4

Max nTPM: 200.4
Min nTPM: 138.8
Sample A Female 200.4
Sample B Female 163.7
Sample C Male 175.7
Sample D Male 138.8
Entorhinal cortex
nTPM: 144.5
Samples: 4

Max nTPM: 169.4
Min nTPM: 116.2
Sample A Female 146.8
Sample B Female 169.4
Sample C Male 145.7
Sample D Male 116.2
Ventral hippocampus
nTPM: 153.8
Samples: 4

Max nTPM: 162.1
Min nTPM: 133.8
Sample A Female 162.1
Sample B Female 133.8
Sample C Male 159.5
Sample D Male 159.6

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 357.1
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 325.5
Samples: 4

Max nTPM: 332.9
Min nTPM: 309.3
Sample A Male 309.3
Sample B Male 331.1
Sample C Female 332.9
Sample D Female 328.5
Hippocampal formation
nTPM: 357.1
Samples: 4

Max nTPM: 375.7
Min nTPM: 331.6
Sample A Male 375.7
Sample B Male 352.2
Sample C Female 368.8
Sample D Female 331.6

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 8.5
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 8.5
68443003 Antisense, RP_050111_01_B10, Mouse strain C57BL/6J (56 days, male) 8.5

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