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TISSUE PRIMARY DATA VAGINA Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM
ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MIDBRAIN NASOPHARYNX
ORAL MUCOSA OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE
SMOOTH MUSCLE SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
ANTIBODIES
AND
VALIDATION
Dictionary
Vagina
Tissue proteome
Vagina
VAGINA - Expression summary
Protein expression
Vaginai

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Squamous epithelial cells: High
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:223.4 nTPM
GTEx:223.4 nTPM
FANTOM5:375.6 Scaled Tags Per Million

VAGINA - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA007644Antibody CAB004435Antibody CAB016225
Squamous epithelial cells HighHighHigh



VAGINA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

223.4
GTEx sample id Sample description nTPM
Vagina
Average nTPM: 223.4
Samples: 156

Max nTPM: 344.0
Min nTPM: 134.0
Std nTPM: 39.7
Median nTPM: 223.1
GTEX-14AS3-1726-SM-5RQJV 40-49 years, female 344.0
GTEX-1MCYP-1326-SM-EV7AD 20-29 years, female 340.5
GTEX-1F5PL-1826-SM-7P8PP 40-49 years, female 332.9
GTEX-14PKU-1326-SM-6871B 40-49 years, female 324.1
GTEX-14JG6-0726-SM-69LQH 30-39 years, female 313.8
GTEX-ZXES-0626-SM-5E45P 30-39 years, female 295.7
GTEX-11VI4-0726-SM-5GU5B 40-49 years, female 294.5
GTEX-11I78-2026-SM-5987C 50-59 years, female 290.5
GTEX-1JN76-1526-SM-CNPPF 20-29 years, female 284.5
GTEX-OHPK-2526-SM-3MJH9 50-59 years, female 282.4
GTEX-ZZPU-2226-SM-5EGIV 50-59 years, female 281.2
GTEX-ZVT2-0626-SM-5GICR 50-59 years, female 280.8
GTEX-1IDJU-1026-SM-AHZ2U 60-69 years, female 278.0
GTEX-S341-1226-SM-4AD5S 40-49 years, female 274.5
GTEX-ZLWG-1126-SM-4WWFQ 50-59 years, female 274.2
GTEX-14PJ6-1626-SM-6872D 60-69 years, female 272.9
GTEX-ZGAY-2226-SM-4YCCX 40-49 years, female 272.9
GTEX-16NGA-1626-SM-72D6M 40-49 years, female 272.2
GTEX-S7SF-1426-SM-4AT5A 20-29 years, female 271.7
GTEX-Y3IK-2226-SM-4YCD4 50-59 years, female 267.9
GTEX-1GN1W-1526-SM-7P8TG 50-59 years, female 266.9
GTEX-1LGRB-2126-SM-COH48 50-59 years, female 266.5
GTEX-1QP28-1426-SM-EVR4E 50-59 years, female 264.7
GTEX-1C475-0526-SM-793AC 40-49 years, female 262.4
GTEX-1GF9U-1926-SM-7P8TZ 40-49 years, female 261.4
GTEX-TSE9-2526-SM-4DXUS 60-69 years, female 259.6
GTEX-PWCY-1726-SM-48TD3 20-29 years, female 258.5
GTEX-OHPL-2526-SM-3MJGT 60-69 years, female 257.8
GTEX-11XUK-1326-SM-5EQM4 40-49 years, female 256.7
GTEX-14PN3-1626-SM-6AJAV 60-69 years, female 256.1
GTEX-ZTPG-2226-SM-57WF9 20-29 years, female 255.2
GTEX-1HCUA-1026-SM-A9SMI 50-59 years, female 255.1
GTEX-13PL7-2726-SM-5L3GB 60-69 years, female 255.0
GTEX-Y114-1926-SM-4TT8J 50-59 years, female 254.4
GTEX-14H4A-2426-SM-664OQ 40-49 years, female 253.6
GTEX-13QBU-1726-SM-5IJFQ 40-49 years, female 252.2
GTEX-11EM3-1826-SM-5A5KO 20-29 years, female 251.1
GTEX-1I4MK-1726-SM-ARL7O 50-59 years, female 250.1
GTEX-1LGOU-1126-SM-D3LAI 20-29 years, female 249.7
GTEX-QCQG-1226-SM-48U23 50-59 years, female 248.3
GTEX-U3ZN-0926-SM-4DXTU 30-39 years, female 247.9
GTEX-14BMU-1926-SM-5S2QC 20-29 years, female 247.3
GTEX-W5WG-1026-SM-4LMIF 50-59 years, female 246.2
GTEX-1399U-1526-SM-5J2N7 50-59 years, female 245.7
GTEX-X15G-1926-SM-4PQZQ 50-59 years, female 244.6
GTEX-18D9A-1026-SM-7KFRU 30-39 years, female 244.5
GTEX-1399S-2326-SM-5K7YV 30-39 years, female 244.3
GTEX-PWN1-2526-SM-48TDS 40-49 years, female 244.0
GTEX-11EMC-1926-SM-5A5JU 60-69 years, female 243.2
GTEX-Q734-1426-SM-DTXFX 40-49 years, female 241.5
GTEX-XV7Q-1626-SM-4BRWC 40-49 years, female 240.6
GTEX-146FH-2626-SM-5Q5E1 50-59 years, female 240.4
GTEX-15SDE-1726-SM-6LPJS 50-59 years, female 237.8
GTEX-1LVAM-1926-SM-E6CIM 50-59 years, female 237.7
GTEX-11GSP-2226-SM-5HL5Q 60-69 years, female 237.6
GTEX-ZP4G-0826-SM-4WWF3 20-29 years, female 237.2
GTEX-1NUQO-1826-SM-E6CQU 20-29 years, female 236.3
GTEX-1MCC2-1126-SM-EVYD6 30-39 years, female 236.1
GTEX-1CAMS-2326-SM-793CR 40-49 years, female 235.6
GTEX-WEY5-0826-SM-4LMIH 40-49 years, female 235.3
GTEX-X8HC-2826-SM-46MWJ 50-59 years, female 235.3
GTEX-13OVI-0926-SM-5J1MI 60-69 years, female 234.6
GTEX-SE5C-1126-SM-4BRWZ 40-49 years, female 234.4
GTEX-11DXX-1726-SM-5H11T 60-69 years, female 233.6
GTEX-S4UY-1326-SM-4AD4X 40-49 years, female 232.9
GTEX-145ME-1426-SM-5RQJS 40-49 years, female 232.8
GTEX-12WSD-2926-SM-5LZUH 60-69 years, female 232.7
GTEX-QVJO-2526-SM-CYPRA 60-69 years, female 232.7
GTEX-T6MO-1226-SM-4DM5S 40-49 years, female 231.1
GTEX-TML8-1126-SM-4DXSS 40-49 years, female 229.6
GTEX-15SB6-1426-SM-7KUEM 50-59 years, female 228.2
GTEX-13W3W-2326-SM-5LU4Y 60-69 years, female 227.2
GTEX-ZYVF-0326-SM-5GIES 50-59 years, female 226.6
GTEX-1HCU8-2026-SM-9YFLE 60-69 years, female 226.4
GTEX-XUZC-1226-SM-4BRVJ 30-39 years, female 226.2
GTEX-13PVR-1426-SM-5S2PW 60-69 years, female 225.7
GTEX-131XG-2126-SM-5DUXG 50-59 years, female 223.3
GTEX-1JMQL-2326-SM-CNNPV 50-59 years, female 223.1
GTEX-1R9JW-1426-SM-DTX9K 30-39 years, female 223.1
GTEX-146FR-2426-SM-5NQAU 60-69 years, female 220.1
GTEX-14PJM-2926-SM-69LOE 50-59 years, female 219.1
GTEX-UJHI-1326-SM-4IHJO 50-59 years, female 216.2
GTEX-ZAK1-2426-SM-EXOHM 50-59 years, female 216.2
GTEX-1IE54-2626-SM-CMKFY 40-49 years, female 216.0
GTEX-WYVS-1426-SM-4ONCV 40-49 years, female 214.7
GTEX-Y8LW-1426-SM-5RQJJ 50-59 years, female 214.0
GTEX-1LH75-1726-SM-DHXKZ 50-59 years, female 213.6
GTEX-ZV6S-1326-SM-59HJA 40-49 years, female 213.0
GTEX-15UF6-2126-SM-6M46Z 70-79 years, female 212.9
GTEX-TMMY-1926-SM-4DXUU 40-49 years, female 212.0
GTEX-1QPFJ-1626-SM-DTX7X 30-39 years, female 211.5
GTEX-1QCLZ-2226-SM-DTX7R 60-69 years, female 211.0
GTEX-RU1J-1426-SM-46MUV 20-29 years, female 209.8
GTEX-13U4I-2026-SM-5LU3L 40-49 years, female 208.6
GTEX-12WSJ-1326-SM-5GCOB 40-49 years, female 207.6
GTEX-1I1GT-1226-SM-B2LVK 60-69 years, female 207.5
GTEX-1117F-2526-SM-5GZY6 60-69 years, female 207.2
GTEX-PX3G-2526-SM-48TZV 20-29 years, female 206.5
GTEX-18A7A-2826-SM-7LT8J 50-59 years, female 205.9
GTEX-ZQG8-1126-SM-51MRL 60-69 years, female 205.4
GTEX-XUW1-0326-SM-4BOOR 50-59 years, female 205.2
GTEX-17F9Y-2326-SM-7DUFP 70-79 years, female 204.8
GTEX-147F3-1526-SM-5SIAK 50-59 years, female 204.7
GTEX-15ER7-2526-SM-7KUFW 20-29 years, female 204.5
GTEX-13D11-1326-SM-5IJFY 50-59 years, female 203.6
GTEX-12ZZX-1926-SM-5EGKC 40-49 years, female 203.3
GTEX-RWS6-1726-SM-47JXP 60-69 years, female 201.8
GTEX-N7MT-1926-SM-3LK5N 60-69 years, female 200.5
GTEX-11P81-2126-SM-5HL6N 30-39 years, female 200.0
GTEX-ZE7O-2426-SM-57WD7 50-59 years, female 199.6
GTEX-S4P3-1126-SM-4AD52 50-59 years, female 199.0
GTEX-15DYW-2926-SM-6PANA 60-69 years, female 198.8
GTEX-P78B-2226-SM-3P5ZZ 40-49 years, female 197.9
GTEX-ZC5H-2226-SM-4WAWS 40-49 years, female 196.6
GTEX-ZYY3-2626-SM-5N9DH 60-69 years, female 196.4
GTEX-1LVAN-1626-SM-CNPQ7 50-59 years, female 195.6
GTEX-YFC4-2926-SM-5IFJ8 40-49 years, female 195.0
GTEX-1ICG6-1626-SM-ARL81 70-79 years, female 193.0
GTEX-P4PP-2526-SM-3P61P 30-39 years, female 190.7
GTEX-1HFI7-1126-SM-A96S5 50-59 years, female 190.4
GTEX-1F48J-2526-SM-7P8TU 50-59 years, female 189.8
GTEX-15SHU-2926-SM-7KUKT 40-49 years, female 187.9
GTEX-1S5ZU-2626-SM-E9TII 20-29 years, female 187.7
GTEX-14A5I-2726-SM-5SIB3 50-59 years, female 186.9
GTEX-1HCU6-2326-SM-ACKXP 60-69 years, female 185.6
GTEX-145LS-2526-SM-5TDC9 60-69 years, female 184.4
GTEX-1GMR8-2526-SM-7RHI9 50-59 years, female 183.2
GTEX-13N11-1526-SM-5L3FL 50-59 years, female 183.0
GTEX-1HBPM-2726-SM-9WYUA 60-69 years, female 182.9
GTEX-16NPV-2526-SM-6M483 50-59 years, female 182.5
GTEX-17JCI-2526-SM-7DHLB 60-69 years, female 182.5
GTEX-1J1OQ-1826-SM-CL53R 40-49 years, female 180.7
GTEX-SN8G-2626-SM-EXUQT 50-59 years, female 179.4
GTEX-131YS-2426-SM-5J2OD 60-69 years, female 177.3
GTEX-1PIEJ-1926-SM-EVYB7 20-29 years, female 177.0
GTEX-1A8FM-2426-SM-7IGPE 50-59 years, female 176.3
GTEX-T2IS-1926-SM-4DM74 20-29 years, female 175.5
GTEX-1EWIQ-2326-SM-7IGNF 70-79 years, female 175.0
GTEX-1GN1U-2426-SM-9KNTU 50-59 years, female 174.9
GTEX-113JC-1926-SM-5N9GE 50-59 years, female 174.7
GTEX-YJ8O-1226-SM-5P9JE 40-49 years, female 174.2
GTEX-OHPN-2426-SM-E9TI5 60-69 years, female 173.6
GTEX-13QIC-1826-SM-5J1MY 60-69 years, female 173.5
GTEX-NPJ7-2526-SM-EV79A 60-69 years, female 173.5
GTEX-14DAQ-2326-SM-5S2QX 60-69 years, female 172.8
GTEX-PLZ4-2726-SM-3P61A 50-59 years, female 172.2
GTEX-1HBPH-2926-SM-9WPNX 40-49 years, female 170.8
GTEX-ZVT3-2726-SM-5GU5X 60-69 years, female 169.4
GTEX-1J8EW-2526-SM-CKZO2 60-69 years, female 164.3
GTEX-1JN1M-2326-SM-ARZNG 60-69 years, female 161.7
GTEX-QDT8-2526-SM-48TYX 30-39 years, female 161.5
GTEX-1AMFI-1526-SM-73KVY 50-59 years, female 159.8
GTEX-183WM-2126-SM-7LG4I 70-79 years, female 157.6
GTEX-1LNCM-1026-SM-E9U5D 50-59 years, female 157.4
GTEX-WRHU-2926-SM-4MVNQ 50-59 years, female 155.1
GTEX-11TTK-2726-SM-5GU58 60-69 years, female 134.0
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VAGINA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

375.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Vagina
Scaled Tags Per Million: 375.6
FF:10204-103F6 68 years, female 375.6

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