PONS AND MEDULLA - Expression summary
Protein expressioni No data
RNA expressioni
HPA Brain:175.2 nTPM
FANTOM5:94.4 Scaled Tags Per Million
Pig:58.8 nTPM
Mouse:96.2 nTPM
Allen mouse:4.5 Expression energy

PONS AND MEDULLA - HPA Brain RNA-seq
Max subtype nTPMi 175.2
Sample id Sample description nTPM
Anterior cochlear nucleus, ventral
nTPM: 67.4
2301 Female, age 85, both hemispheres 75.1
1984 Male, age 76, both hemispheres 71.5
2090 Male, age 80, both hemispheres 71.4
2188 Female, age 91, both hemispheres 51.6
Area postrema
nTPM: 159.5
2799 Male, age 61, both hemispheres 220.2
2306 Male, age 80, both hemispheres 132.7
2054 Male, age 76, both hemispheres 125.6
Dorsal cochlear nucleus
nTPM: 104.0
2802 Male, age 74, right hemisphere 128.1
2378 Male, age 80, both hemispheres 114.7
2370 Male, age 61, both hemispheres 107.4
2058 Male, age 76, both hemispheres 85.5
2187 Female, age 91, both hemispheres 84.3
Dorsal medullary reticular nucleus
nTPM: 91.4
2088 Male, age 76, both hemispheres 96.7
2373 Male, age 61, both hemispheres 95.8
2040 Female, age 85, both hemispheres 81.6
Dorsal motor vagal complex
nTPM: 145.6
2643 Male, age 74, both hemispheres 214.7
2797 Male, age 61, both hemispheres 172.0
2844 Male, age 55, unknown 158.7
2807 Female, age 85, both hemispheres 140.6
2133 Female, age 91, both hemispheres 135.3
2813 Female, age 72, unknown 118.1
2000 Male, age 74, unknown 113.1
2185 Male, age 76, both hemispheres 112.2
Dorsal tegmental nucleus
nTPM: 94.8
2326 Male, age 74, both hemispheres 104.9
2358 Male, age 61, both hemispheres 96.9
1936 Male, age 76, left hemisphere 93.5
2083 Male, age 80, both hemispheres 83.7
Dorsolateral tegmental area
nTPM: 97.3
2360 Male, age 74, both hemispheres 174.4
2141 Male, age 76, both hemispheres 98.8
2654 Male, age 80, both hemispheres 80.4
2337 Male, age 61, both hemispheres 72.6
2751 Female, age 85, both hemispheres 60.5
Gigantocellular reticular nuclei, medullary
nTPM: 78.6
2314 Male, age 61, both hemispheres 105.0
2462 Male, age 74, both hemispheres 91.5
2022 Male, age 76, right hemisphere 79.7
2310 Male, age 80, both hemispheres 68.9
2387 Female, age 91, both hemispheres 65.5
1876 Female, age 85, both hemispheres 61.0
Gigantocellular reticular nuclei, pars
nTPM: 79.5
2084 Female, age 85, both hemispheres 90.9
2336 Male, age 61, both hemispheres 85.9
2330 Male, age 80, both hemispheres 79.8
2706 Male, age 80, both hemispheres 74.0
2168 Male, age 76, both hemispheres 66.8
Inferior olive
nTPM: 121.2
2178 Male, age 61, both hemispheres 134.7
2379 Male, age 80, both hemispheres 124.9
2085 Female, age 85, both hemispheres 119.6
2563 Male, age 74, both hemispheres 118.4
2628 Female, age 91, both hemispheres 108.4
Kolliker-Fuse nucleus
nTPM: 80.2
2315 Male, age 76, right hemisphere 90.7
2163 Male, age 80, both hemispheres 86.4
2793 Female, age 91, left hemisphere 63.5
Lateral lemniscal nuclei
nTPM: 67.6
2746 Female, age 85, left hemisphere 73.5
2320 Female, age 91, left hemisphere 69.6
2453 Male, age 74, right hemisphere 68.9
2169 Male, age 76, both hemispheres 65.2
2036 Male, age 80, both hemispheres 60.6
Lateral medullary reticular nucleus
nTPM: 98.7
2804 Female, age 91, both hemispheres 129.4
2374 Male, age 61, both hemispheres 109.3
2190 Female, age 85, both hemispheres 104.9
2852 Male, age 80, both hemispheres 97.8
2305 Male, age 74, both hemispheres 78.0
2044 Male, age 76, both hemispheres 72.7
Lateral parabrachial nucleus
nTPM: 75.1
2139 Female, age 85, right hemisphere 86.8
2790 Male, age 61, both hemispheres 77.8
2013 Male, age 80, both hemispheres 74.5
2792 Male, age 76, both hemispheres 61.1
Lateral vestibular nucleus
nTPM: 109.4
2184 Male, age 76, both hemispheres 114.3
2311 Male, age 80, both hemispheres 104.4
Locus coeruleus
nTPM: 116.8
2123 Female, age 91, both hemispheres 139.6
2317 Female, age 72, unknown 132.3
2014 Male, age 55, unknown 120.2
2162 Male, age 80, both hemispheres 117.3
1980 Male, age 76, both hemispheres 117.2
2720 Male, age 74, both hemispheres 103.1
2788 Male, age 74, unknown 87.9
Medial olivary nucleus
nTPM: 86.1
2138 Female, age 91, both hemispheres 110.6
2851 Male, age 80, both hemispheres 84.3
1943 Male, age 61, both hemispheres 81.8
1962 Male, age 76, both hemispheres 67.6
Medial parabrachial nucleus
nTPM: 75.1
2156 Male, age 61, both hemispheres 90.2
2786 Male, age 76, both hemispheres 86.7
2170 Female, age 91, both hemispheres 72.7
2463 Female, age 85, right hemisphere 66.4
2854 Male, age 80, both hemispheres 59.4
Medial periolivary nuclei
nTPM: 69.3
2171 Female, age 85, both hemispheres 84.1
2791 Male, age 74, right hemisphere 69.9
2458 Female, age 91, both hemispheres 69.1
2081 Male, age 80, both hemispheres 61.9
2063 Male, age 76, both hemispheres 61.2
Medial vestibular nucleus
nTPM: 99.9
2743 Female, age 85, both hemispheres 137.9
2624 Male, age 61, both hemispheres 119.4
2134 Male, age 76, both hemispheres 108.8
2801 Male, age 74, both hemispheres 91.8
2093 Male, age 80, both hemispheres 78.0
2803 Female, age 91, both hemispheres 63.8
Motor facial nucleus
nTPM: 71.5
2795 Female, age 91, both hemispheres 87.3
2126 Male, age 61, both hemispheres 86.4
2062 Male, age 76, both hemispheres 68.3
2365 Male, age 74, right hemisphere 65.5
2327 Male, age 80, both hemispheres 63.8
2697 Female, age 85, both hemispheres 57.5
Motor hypoglossal nucleus
nTPM: 107.8
2277 Male, age 76, both hemispheres 126.5
2461 Male, age 61, both hemispheres 124.9
2182 Male, age 80, both hemispheres 104.8
2125 Female, age 91, both hemispheres 93.5
2132 Female, age 85, both hemispheres 89.1
Motor trigeminal nucleus
nTPM: 74.0
2335 Male, age 61, both hemispheres 87.1
2309 Male, age 76, both hemispheres 76.8
2560 Male, age 74, both hemispheres 75.5
2321 Female, age 91, both hemispheres 74.9
2079 Male, age 80, both hemispheres 55.9
Nuclei of the trapezoid body
nTPM: 71.8
2735 Female, age 85, both hemispheres 87.5
2368 Female, age 91, both hemispheres 82.8
2166 Male, age 80, both hemispheres 66.5
1983 Male, age 76, both hemispheres 63.1
2159 Male, age 61, both hemispheres 59.1
Nucleus ambiguus
nTPM: 103.3
2096 Female, age 85, both hemispheres 129.0
2071 Male, age 76, both hemispheres 77.7
Nucleus cuneatus
nTPM: 108.2
2564 Male, age 74, both hemispheres 142.8
2805 Female, age 91, both hemispheres 131.5
2562 Male, age 61, both hemispheres 118.4
2131 Male, age 76, both hemispheres 113.4
2100 Male, age 76, both hemispheres 102.9
2808 Female, age 85, both hemispheres 100.2
2380 Male, age 80, both hemispheres 91.2
2381 Male, age 80, both hemispheres 88.3
2376 Male, age 61, both hemispheres 84.8
Nucleus gracilis
nTPM: 137.1
2299 Female, age 85, both hemispheres 199.9
2627 Male, age 74, both hemispheres 119.2
2382 Male, age 80, both hemispheres 92.1
Nucleus raphe magnus
nTPM: 71.6
2172 Female, age 85, both hemispheres 78.6
2455 Male, age 74, both hemispheres 77.1
2160 Male, age 61, both hemispheres 72.5
2328 Male, age 80, both hemispheres 70.8
2051 Male, age 76, both hemispheres 70.5
2459 Female, age 91, both hemispheres 59.9
Nucleus raphe obscurus
nTPM: 76.1
2142 Male, age 76, midline 90.1
2800 Male, age 61, midline 75.3
2845 Female, age 85, midline 62.8
Nucleus raphe pallidus
nTPM: 91.5
2145 Male, age 76, midline 98.5
1924 Male, age 61, midline 89.4
2183 Male, age 80, midline 86.4
Nucleus tractus solitarii
nTPM: 175.2
2191 Female, age 85, both hemispheres 283.3
2307 Male, age 80, both hemispheres 191.3
2144 Female, age 91, right hemisphere 120.9
2656 Male, age 76, both hemispheres 105.3
Paramedian reticular nucleus
nTPM: 71.7
2313 Male, age 61, both hemispheres 88.6
2057 Male, age 80, both hemispheres 79.8
2050 Female, age 85, both hemispheres 61.3
2052 Male, age 76, both hemispheres 57.1
Parvicellular reticular nuclei
nTPM: 71.4
2558 Male, age 74, both hemispheres 77.0
2119 Male, age 80, both hemispheres 74.3
2095 Male, age 76, both hemispheres 63.0
Parvicellular reticular nuclei, medullary
nTPM: 99.8
2091 Female, age 85, both hemispheres 114.5
2181 Male, age 80, left hemisphere 99.4
2189 Female, age 91, both hemispheres 85.6
Pedunculopontine tegmental nucleus
nTPM: 80.4
1921 Female, age 85, both hemispheres 95.6
2334 Male, age 80, both hemispheres 86.7
2338 Male, age 61, both hemispheres 58.8
Peritrigeminal nucleus
nTPM: 85.8
2067 Female, age 85, both hemispheres 103.3
2179 Male, age 61, both hemispheres 82.6
2136 Male, age 76, both hemispheres 71.6
Pontine nuclei
nTPM: 62.6
2787 Female, age 85, both hemispheres 79.5
1863 Male, age 55, unknown 74.6
2115 Male, age 80, left hemisphere 71.1
1968 Male, age 76, left hemisphere 66.8
2109 Female, age 72, unknown 62.0
2727 Male, age 61, right hemisphere 56.0
2319 Female, age 91, both hemispheres 52.5
2454 Male, age 74, left hemisphere 37.9
Pontine raphe nucleus
nTPM: 76.8
2853 Male, age 76, midline 85.0
2122 Female, age 85, midline 68.6
Posteroventral cochlear nucleus
nTPM: 71.4
2371 Male, age 61, both hemispheres 90.8
2752 Female, age 85, both hemispheres 86.5
2070 Male, age 76, both hemispheres 79.2
2341 Male, age 80, both hemispheres 61.9
2135 Female, age 91, both hemispheres 38.4
Prepositus hypoglossal nucleus
nTPM: 122.4
2086 Male, age 80, both hemispheres 142.2
2855 Female, age 85, right hemisphere 102.6
Principal sensory trigeminal nucleus
nTPM: 75.8
2324 Male, age 76, both hemispheres 110.8
2158 Male, age 61, both hemispheres 78.2
2008 Male, age 80, left hemisphere 60.5
2367 Female, age 91, left hemisphere 53.7
Reticular pontine nucleus, caudal
nTPM: 68.5
2332 Male, age 80, right hemisphere 71.6
2092 Male, age 76, both hemispheres 69.6
2457 Female, age 91, both hemispheres 68.2
2559 Male, age 74, both hemispheres 64.8
Reticular pontine nucleus, oral
nTPM: 61.6
2167 Male, age 76, both hemispheres 76.3
1939 Male, age 80, both hemispheres 69.4
2012 Female, age 85, both hemispheres 62.7
2366 Female, age 91, both hemispheres 52.2
2361 Male, age 74, both hemispheres 47.6
Reticulotegmental nucleus
nTPM: 75.8
2322 Female, age 91, both hemispheres 80.4
2452 Male, age 74, both hemispheres 79.6
2325 Male, age 76, both hemispheres 73.5
2333 Male, age 80, both hemispheres 69.7
Spinal trigeminal nucleus, caudal
nTPM: 102.9
2642 Male, age 74, both hemispheres 115.8
2308 Male, age 80, both hemispheres 108.4
2447 Male, age 76, both hemispheres 106.3
2390 Female, age 91, both hemispheres 105.4
2312 Male, age 61, both hemispheres 78.7
Spinal trigeminal nucleus, interpolar
nTPM: 87.4
2625 Male, age 61, both hemispheres 118.4
2033 Male, age 80, both hemispheres 93.7
2386 Female, age 85, both hemispheres 83.6
2389 Female, age 91, both hemispheres 74.9
2066 Male, age 76, right hemisphere 66.4
Spinal trigeminal nucleus, oral
nTPM: 104.5
1978 Male, age 76, both hemispheres 123.5
2164 Male, age 80, both hemispheres 97.0
2737 Female, age 85, both hemispheres 93.2
Spinal vestibular nucleus
nTPM: 88.0
2384 Male, age 74, both hemispheres 105.3
2780 Male, age 80, both hemispheres 94.2
2796 Male, age 61, both hemispheres 84.0
2806 Female, age 85, both hemispheres 84.0
2186 Female, age 91, both hemispheres 82.9
2748 Male, age 76, both hemispheres 77.6
Subcoeruleus area
nTPM: 82.5
2451 Male, age 74, both hemispheres 117.5
2323 Female, age 91, left hemisphere 104.0
2089 Male, age 76, left hemisphere 71.3
1958 Male, age 80, both hemispheres 67.7
2369 Female, age 85, left hemisphere 52.2
Superior olive
nTPM: 66.2
2561 Female, age 91, both hemispheres 75.2
2364 Male, age 74, right hemisphere 67.8
2020 Male, age 76, both hemispheres 64.7
2329 Male, age 80, right hemisphere 63.9
1875 Female, age 85, both hemispheres 59.5
Superior vestibular nucleus
nTPM: 119.1
2383 Male, age 74, both hemispheres 141.2
2015 Male, age 80, both hemispheres 110.1
2061 Male, age 76, both hemispheres 106.1
Ventral medullary reticular nucleus
nTPM: 93.7
2372 Male, age 61, both hemispheres 100.9
2060 Male, age 76, both hemispheres 86.5
Ventral periolivary nuclei
nTPM: 71.2
2130 Female, age 85, both hemispheres 80.5
2794 Female, age 91, left hemisphere 72.9
2165 Male, age 80, both hemispheres 69.5
2023 Male, age 76, both hemispheres 61.8
Ventrolateral medulla, A1-C1 cell groups
nTPM: 95.7
2302 Female, age 91, both hemispheres 137.4
2180 Male, age 61, both hemispheres 99.1
2741 Female, age 85, both hemispheres 94.8
2118 Male, age 80, both hemispheres 77.4
1986 Male, age 76, both hemispheres 70.0
Ventrolateral tegmental area, A5 NE cell group
nTPM: 73.0
2359 Male, age 61, both hemispheres 77.3
2449 Male, age 74, both hemispheres 75.7
2161 Male, age 80, both hemispheres 74.0
2840 Female, age 85, both hemispheres 72.9
2456 Female, age 91, both hemispheres 72.4
1959 Male, age 76, both hemispheres 65.9

PONS AND MEDULLA - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 94.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Locus coeruleus
Scaled Tags Per Million: 90.8
FF:10182-103D2 60 years, female 100.2
FF:10165-103B3 76 years, female 81.4
Medulla oblongata
Scaled Tags Per Million: 94.4
FF:10038-101F2 18-64 years, mixed 110.7
FF:10155-103A2 76 years, female 101.6
FF:10174-103C3 60 years, female 71.1
Pons
Scaled Tags Per Million: 83.6
FF:10033-101E6 18-54 years, mixed 83.6

PONS AND MEDULLA - Pig RNA-seqi
Max subtype nTPMi 58.8
Pig sample Sample description nTPM
Medulla oblongata
nTPM: 45.4
Samples: 4

Max nTPM: 51.1
Min nTPM: 38.1
Sample A Female 45.7
Sample B Female 51.1
Sample C Male 46.6
Sample D Male 38.1
Pons
nTPM: 58.8
Samples: 4

Max nTPM: 118.9
Min nTPM: 25.4
Sample A Female 118.9
Sample B Female 45.7
Sample C Male 45.3
Sample D Male 25.4

PONS AND MEDULLA - Mouse RNA-seqi
Max subtype nTPMi 96.2
Mouse sample Sample description nTPM
Pons and medulla
nTPM: 96.2
Samples: 4

Max nTPM: 98.0
Min nTPM: 92.4
Sample A Male 92.4
Sample B Male 96.6
Sample C Female 98.0
Sample D Female 97.6

PONS AND MEDULLA - Allen Mouse ISHi
Max subtype Expression energyi 4.5
Allen experiment id Experiment description Expression energy
Medulla oblongata
Expression energy: 4.5
74821712 Antisense, RP_060321_02_C05, Mouse strain C57BL/6J (56 days, male) 4.5
Pons
Expression energy: 3.8
74821712 Antisense, RP_060321_02_C05, Mouse strain C57BL/6J (56 days, male) 3.8

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