We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
APBB1
HPA
RESOURCES
  • TISSUE
  • BRAIN
  • SINGLE CELL
  • SUBCELLULAR
  • CANCER
  • BLOOD
  • CELL LINE
  • STRUCTURE & INTERACTION
ABOUT
  • INTRODUCTION
  • HISTORY
  • ORGANIZATION
  • PUBLICATIONS
  • ANTIBODY SUBMISSION
  • ANTIBODY AVAILABILITY
  • ACKNOWLEDGMENTS
  • CONTACT
NEWS
  • NEWS ARTICLES
  • PRESS ROOM
LEARN
  • DICTIONARY
  • PROTEIN CLASSES
  • PROTEIN EVIDENCE
  • METHODS
  • EDUCATIONAL VIDEOS
DATA
  • DOWNLOADABLE DATA
  • PUBLICATION DATA
  • RELEASE HISTORY
HELP
  • ANTIBODY VALIDATION
  • ASSAYS & ANNOTATION
  • DISCLAIMER
  • HELP & FAQ
  • PRIVACY STATEMENT
  • LICENCE & CITATION
Fields »
Search result

Field
Term
Gene name
Class
Subclass
Class
Keyword
Chromosome
External id
Tissue
Cell type
Expression
Antibody panel
Tissue
Main location
Patient ID
Annotation
Tissue
Category
Tau score
Cluster
Reliability
Brain region
Category
Tau score
Brain region
Category
Tau score
Brain region
Category
Tau score
Cluster
Reliability
Tissue
Cell type
Enrichment
Cell type
Category
Tau score
Cell type
Category
Tau score
Cell type
Category
Tau score
Cell lineage
Category
Tau score
Cluster
Cluster
Location
Searches
Location
Cell line
Class
Type
Phase
Reliability
Cancer
Prognosis
Cancer
Category
Cancer
Category
Tau score
Cluster
Variants
Interacting gene (ensg_id)
Type
Number of interactions
Pathway
Category
Score
Score
Score
Validation
Validation
Validation
Validation
Antibodies
Data type
Column


  • SUMMARY

  • TISSUE

  • BRAIN

  • SINGLE CELL

  • SUBCELL

  • CANCER

  • BLOOD

  • CELL LINE

  • STRUCT & INT

  • APBB1
BRAIN BASAL GANGLIA Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS MEDULLA OBLONGATA
MIDBRAIN OLFACTORY BULB PITUITARY GLAND PONS RETINA SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
AND
VALIDATION
Brain proteome
Basal ganglia
BASAL GANGLIA - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glial cells: Low
Neuronal cells: Medium
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:66.9 nTPM
HPA Brain:202.3 nTPM
GTEx:66.9 nTPM
FANTOM5:135.6 Scaled Tags Per Million
Pig:85.0 nTPM
Mouse:305.9 nTPM
Allen mouse:18.7 Expression energy

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA038521Antibody HPA038522
Glial cells Not detectedLow
Neuronal cells Not detectedMedium





BASAL GANGLIA - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

202.3
Sample id Sample description nTPM
Caudate nucleus
nTPM: 126.6
2288 Male, age 75, left hemisphere 173.5
1781 Male, age 74, unknown 153.8
2846 Female, age 79, unknown 128.5
2481 Female, age 94, left hemisphere 123.0
1854 Male, age 80, left hemisphere 112.0
2290 Female, age 72, unknown 110.3
1857 Female, age 85, left hemisphere 106.1
2289 Male, age 61, right hemisphere 105.5
Globus pallidus, externus
nTPM: 195.3
2772 Female, age 79, unknown 236.8
2395 Male, age 75, both hemispheres 205.5
1996 Male, age 80, right hemisphere 198.1
2646 Male, age 61, right hemisphere 173.2
2567 Female, age 72, unknown 162.8
Globus pallidus, internus
nTPM: 202.3
2287 Male, age 75, right hemisphere 266.1
2778 Female, age 91, both hemispheres 231.2
2111 Female, age 85, right hemisphere 227.0
1818 Male, age 74, unknown 189.3
2037 Male, age 80, right hemisphere 173.7
2566 Female, age 72, unknown 172.5
2483 Female, age 94, right hemisphere 156.1
Nucleus accumbens
nTPM: 145.7
2286 Male, age 75, left hemisphere 177.2
2391 Female, age 94, left hemisphere 158.2
1783 Male, age 74, unknown 146.3
2698 Female, age 72, unknown 141.7
2824 Male, age 61, right hemisphere 141.1
1856 Female, age 91, right hemisphere 137.4
1806 Female, age 85, left hemisphere 132.7
2732 Male, age 80, right hemisphere 130.7
Nucleus basalis of Meynert
nTPM: 137.2
2569 Male, age 61, both hemispheres 169.3
2821 Male, age 75, both hemispheres 164.2
2484 Female, age 94, left hemisphere 114.0
2393 Male, age 80, right hemisphere 101.4
Nucleus of the diagonal band
nTPM: 190.5
2775 Male, age 80, right hemisphere 240.0
2029 Male, age 61, right hemisphere 212.5
1812 Female, age 91, both hemispheres 205.4
2195 Female, age 85, both hemispheres 173.5
1979 Male, age 74, unknown 120.8
Putamen
nTPM: 129.7
2647 Male, age 75, left hemisphere 174.1
1937 Female, age 91, right hemisphere 142.0
1829 Male, age 74, unknown 134.2
2482 Female, age 94, left hemisphere 130.5
2466 Female, age 79, unknown 124.9
2489 Female, age 72, unknown 102.3
1838 Male, age 80, right hemisphere 100.0
Septal nuclei
nTPM: 170.2
2031 Female, age 72, unknown 232.4
1960 Male, age 74, unknown 208.6
2009 Female, age 91, both hemispheres 164.4
2629 Female, age 94, right hemisphere 163.8
2394 Male, age 61, left hemisphere 154.5
2059 Female, age 85, both hemispheres 145.1
2199 Male, age 80, right hemisphere 122.5
Stria terminalis, bed nucleus
nTPM: 170.1
1974 Female, age 91, both hemispheres 205.8
2486 Female, age 94, both hemispheres 173.8
2201 Male, age 74, unknown 130.8

BASAL GANGLIA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

66.9
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 61.2
Samples: 246

Max nTPM: 194.7
Min nTPM: 33.7
Std nTPM: 16.5
Median nTPM: 58.7
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 194.7
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 129.3
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 125.6
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 107.4
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 105.9
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 92.3
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 89.6
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 88.1
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 87.4
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 87.2
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 87.2
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 86.2
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 85.9
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 84.7
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 83.7
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 82.5
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 81.8
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 81.2
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 81.0
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 80.9
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 80.7
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 80.3
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 79.0
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 78.4
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 78.2
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 77.3
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 77.1
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 76.9
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 76.6
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 75.9
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 75.3
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 75.2
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 74.7
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 74.7
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 74.7
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 74.4
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 74.4
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 74.2
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 73.8
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 73.4
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 73.3
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 73.0
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 72.6
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 72.5
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 72.1
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 71.8
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 71.5
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 71.2
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 71.2
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 71.0
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 70.9
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 70.9
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 70.7
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 70.4
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 70.4
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 70.3
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 70.2
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 69.7
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 69.6
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 69.5
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 69.3
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 69.0
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 68.8
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 68.7
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 68.6
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 68.5
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 67.8
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 67.7
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 67.7
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 67.5
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 67.3
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 67.2
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 66.6
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 66.5
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 66.3
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 66.1
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 65.9
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 65.4
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 65.4
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 65.4
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 65.4
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 65.3
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 65.3
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 65.1
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 65.1
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 65.0
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 64.7
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 64.5
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 64.2
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 64.1
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 63.9
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 63.8
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 63.7
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 63.1
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 62.9
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 62.6
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 62.5
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 62.3
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 62.1
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 62.0
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 61.9
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 61.8
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 61.8
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 61.6
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 61.6
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 61.6
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 61.4
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 61.3
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 61.2
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 61.2
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 61.0
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 61.0
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 60.9
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 60.7
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 60.4
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 59.7
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 59.7
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 59.5
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 59.2
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 59.2
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 59.1
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 58.8
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 58.8
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 58.6
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 58.6
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 58.4
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 58.2
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 57.8
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 57.6
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 57.3
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 57.2
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 57.2
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 57.0
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 56.9
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 56.8
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 56.8
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 56.6
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 56.4
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 56.3
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 55.9
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 55.9
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 55.9
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 55.5
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 55.5
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 55.3
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 55.2
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 55.1
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 54.9
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 54.8
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 54.8
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 54.8
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 54.7
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 54.6
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 54.5
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 54.5
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 54.2
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 54.1
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 54.1
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 53.9
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 53.9
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 53.8
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 53.7
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 53.7
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 53.7
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 53.6
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 53.5
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 53.5
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 53.4
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 53.3
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 53.3
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 53.2
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 53.2
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 53.0
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 53.0
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 52.9
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 52.8
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 52.8
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 52.7
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 52.7
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 52.7
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 52.6
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 52.6
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 52.4
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 52.4
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 52.2
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 51.9
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 51.7
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 51.5
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 51.3
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 51.1
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 51.1
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 50.8
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 50.7
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 50.7
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 50.6
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 50.4
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 50.4
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 50.1
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 49.8
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 49.7
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 49.7
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 49.2
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 49.1
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 48.5
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 47.9
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 47.8
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 47.8
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 47.3
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 47.2
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 46.6
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 46.5
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 46.4
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 46.4
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 46.3
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 46.3
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 46.3
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 46.0
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 46.0
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 45.9
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 44.8
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 44.7
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 44.3
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 44.2
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 44.0
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 43.9
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 43.7
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 43.1
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 42.9
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 42.5
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 42.2
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 41.9
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 41.8
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 41.1
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 40.1
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 39.3
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 39.1
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 38.9
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 38.7
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 38.7
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 38.5
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 37.7
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 37.1
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 37.1
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 36.1
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 36.1
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 33.7
Show allShow less
Brain - Nucleus accumbens (basal ganglia)
Average nTPM: 65.8
Samples: 246

Max nTPM: 134.6
Min nTPM: 11.2
Std nTPM: 18.0
Median nTPM: 67.5
GTEX-1HFI6-0011-R6b-SM-CM2SR 40-49 years, male 134.6
GTEX-18464-0011-R6a-SM-731CA 50-59 years, male 109.9
GTEX-11DYG-0011-R6a-SM-DO936 60-69 years, male 100.9
GTEX-WL46-0011-R6A-SM-3LK6X 50-59 years, male 100.8
GTEX-1C6WA-0011-R6a-SM-7PBYP 60-69 years, male 100.5
GTEX-1F75A-0011-R6b-SM-9QEHD 50-59 years, male 99.7
GTEX-ZAB4-0011-R6a-SM-4SOKD 40-49 years, male 99.4
GTEX-1ICLZ-0011-R6b-SM-A9G3A 60-69 years, male 98.3
GTEX-14PJM-0011-R6a-SM-6872G 50-59 years, female 97.9
GTEX-1JMLX-0011-R6b-SM-EXUT9 50-59 years, male 96.2
GTEX-1GN73-0011-R6b-SM-CJI2T 60-69 years, male 96.0
GTEX-XLM4-0011-R6A-SM-4AT4B 60-69 years, male 94.4
GTEX-YFC4-0011-R6b-SM-4V6E1 40-49 years, female 94.2
GTEX-1IY9M-0011-R6a-SM-D4P28 60-69 years, male 93.3
GTEX-1LVAO-0011-R6b-SM-EZ6MX 60-69 years, male 93.3
GTEX-1313W-0011-R6a-SM-5K7XO 50-59 years, female 93.1
GTEX-14E7W-0011-R6b-SM-5ZZV3 70-79 years, male 91.4
GTEX-15RJE-0011-R6a-SM-7DHL8 40-49 years, male 91.4
GTEX-12WSC-0011-R6b-SM-5LU99 50-59 years, male 90.6
GTEX-ZUA1-0011-R6b-SM-4YCDD 40-49 years, male 90.6
GTEX-16YQH-0011-R6b-SM-7938T 30-39 years, male 90.0
GTEX-1OJC4-0011-R6a-SM-EXOIM 50-59 years, female 89.3
GTEX-1I1CD-0011-R6b-SM-CJI3Y 60-69 years, female 88.9
GTEX-11DXW-0011-R6a-SM-DO11N 40-49 years, male 88.6
GTEX-N7MS-0011-R6a-SM-2HMJ4 60-69 years, male 87.8
GTEX-13VXU-0011-R6a-SM-5SI71 50-59 years, male 86.9
GTEX-1I1GV-0011-R6b-SM-ARU6Q 60-69 years, male 86.9
GTEX-13FLV-0011-R6a-SM-5KLZ4 50-59 years, male 86.8
GTEX-145MH-0011-R6a-SM-5PNZ7 50-59 years, male 85.8
GTEX-13X6J-0011-R6a-SM-5PNUB 50-59 years, male 85.6
GTEX-1F7RK-0011-R6b-SM-ARZMG 20-29 years, female 85.6
GTEX-11NUK-0011-R6a-SM-DO93O 50-59 years, male 85.5
GTEX-1B933-0011-R6b-SM-79OOQ 50-59 years, female 85.2
GTEX-13N1W-0011-R6a-SM-5MR43 70-79 years, male 83.9
GTEX-14BIN-0011-R6a-SM-5S2RH 50-59 years, female 83.8
GTEX-12WSD-0011-R6b-SM-5P9JU 60-69 years, female 83.7
GTEX-14JIY-0011-R6b-SM-68714 60-69 years, male 83.2
GTEX-1F48J-0011-R6a-SM-CJI2F 50-59 years, female 82.9
GTEX-1F6IF-0011-R6a-SM-9QEIO 60-69 years, male 82.8
GTEX-1F75W-0011-R6a-SM-9QEI5 60-69 years, male 82.7
GTEX-1B996-0011-R6b-SM-793AQ 60-69 years, male 82.5
GTEX-WZTO-0011-R6B-SM-4E3J6 40-49 years, male 81.9
GTEX-131XH-0011-R6a-SM-5KM2G 50-59 years, male 81.8
GTEX-13FHO-0011-R6b-SM-5LZX1 60-69 years, male 81.8
GTEX-14BMV-0011-R6b-SM-5YY9I 50-59 years, male 81.7
GTEX-12ZZX-0011-R6a-SM-5HL8L 40-49 years, female 81.6
GTEX-QVJO-0011-R6A-SM-2S1QN 60-69 years, female 81.5
GTEX-T2IS-0011-R6A-SM-32QP2 20-29 years, female 81.4
GTEX-1GTWX-0011-R6a-SM-A96RN 60-69 years, male 81.0
GTEX-15DYW-0011-R6b-SM-6PALA 60-69 years, female 80.8
GTEX-14PN4-0011-R6b-SM-69LQU 50-59 years, male 79.9
GTEX-15CHQ-0011-R6b-SM-69LOX 60-69 years, male 79.9
GTEX-11NV4-0011-R6a-SM-57WD5 60-69 years, male 79.7
GTEX-1HR9M-0011-R6a-SM-ARU6Z 60-69 years, male 79.6
GTEX-13G51-0011-R6b-SM-5LZX4 60-69 years, male 79.4
GTEX-1I1GR-0011-R6a-SM-CMKHI 60-69 years, male 79.4
GTEX-13OW6-0011-R6b-SM-5L3GR 50-59 years, male 79.2
GTEX-11DXY-0011-R6a-SM-DNZZF 60-69 years, male 79.2
GTEX-1IDJH-0011-R6a-SM-A9SLZ 70-79 years, male 79.1
GTEX-1EMGI-0011-R6a-SM-9OSVR 60-69 years, male 78.2
GTEX-11OF3-0011-R6b-SM-57WBG 60-69 years, male 78.0
GTEX-13SLX-0011-R6a-SM-5PNX4 50-59 years, female 78.0
GTEX-14ABY-0011-R6a-SM-5PNWR 50-59 years, male 78.0
GTEX-17MF6-0011-R6b-SM-7LG6G 40-49 years, male 78.0
GTEX-N7MT-0011-R6a-SM-2I3G3 60-69 years, female 77.7
GTEX-13O3Q-0011-R6a-SM-5KM2V 50-59 years, male 77.6
GTEX-1AX9I-0011-R6a-SM-7P8PK 60-69 years, male 77.6
GTEX-13OVL-0011-R6a-SM-5L3G4 50-59 years, male 77.3
GTEX-11PRG-0011-R6b-SM-DO923 50-59 years, male 77.1
GTEX-13X6K-0011-R6a-SM-5P9K6 60-69 years, female 76.5
GTEX-NL3H-0011-R6a-SM-2I3G8 60-69 years, male 76.4
GTEX-14C5O-0011-R6a-SM-5YYB6 60-69 years, male 76.3
GTEX-1HB9E-0011-R6b-SM-A9G1P 50-59 years, male 76.3
GTEX-13RTJ-0011-R6a-SM-5SI74 60-69 years, male 76.0
GTEX-1H1ZS-0011-R6b-SM-A9G1F 70-79 years, male 75.9
GTEX-S7SE-0011-R6A-SM-2XCD9 50-59 years, male 75.7
GTEX-12WSH-0011-R6b-SM-5P9F4 50-59 years, male 75.4
GTEX-1EX96-0011-R6a-SM-9OSVV 50-59 years, male 75.3
GTEX-Q2AG-0011-R6A-SM-2HML7 40-49 years, female 75.2
GTEX-145LS-0011-R6b-SM-5PNWL 60-69 years, female 75.1
GTEX-13NYS-0011-R6b-SM-5MR3R 60-69 years, male 74.7
GTEX-ZDXO-0011-R6a-SM-4WWCT 60-69 years, male 74.7
GTEX-WHSE-0011-R6A-SM-3P5ZP 20-29 years, male 74.6
GTEX-1I1GQ-0011-R6b-SM-CE6SE 50-59 years, male 74.6
GTEX-139TT-0011-R6b-SM-5J2ON 60-69 years, male 74.1
GTEX-17HG3-0011-R6b-SM-79OK8 30-39 years, female 73.9
GTEX-1GN1U-0011-R6a-SM-CKZNO 50-59 years, female 73.9
GTEX-1B8L1-0011-R6b-SM-7P8SU 60-69 years, male 73.6
GTEX-17EVP-0011-R6b-SM-7LT99 40-49 years, male 73.3
GTEX-11DZ1-0011-R6b-SM-DNZZG 50-59 years, male 73.3
GTEX-13NYB-0011-R6b-SM-5MR51 40-49 years, male 73.2
GTEX-147GR-0011-R6b-SM-5S2RO 60-69 years, male 73.2
GTEX-1HT8W-0011-R6a-SM-CM2SY 30-39 years, male 73.0
GTEX-11GSP-0011-R6b-SM-57WBQ 60-69 years, female 72.9
GTEX-1CB4G-0011-R6b-SM-9QEGO 60-69 years, male 72.2
GTEX-15ER7-0011-R6a-SM-6M46M 20-29 years, female 72.1
GTEX-12ZZY-0011-R6b-SM-5EGLA 60-69 years, male 71.4
GTEX-13FXS-0011-R6b-SM-5L3F7 50-59 years, male 71.4
GTEX-18A6Q-0011-R6a-SM-7LG6R 60-69 years, male 71.4
GTEX-14JG1-0011-R6b-SM-5YYAU 40-49 years, male 71.1
GTEX-TSE9-0011-R6A-SM-3DB7L 60-69 years, female 70.9
GTEX-NL4W-0011-R6a-SM-2I3GA 50-59 years, male 70.5
GTEX-YJ89-0011-R6a-SM-4V6GN 60-69 years, male 70.4
GTEX-1HBPH-0011-R6a-SM-CKZOV 40-49 years, female 70.4
GTEX-1MJK2-0011-R6a-SM-EXUS3 50-59 years, male 70.4
GTEX-1GZ4I-0011-R6b-SM-9WG77 50-59 years, male 70.3
GTEX-1EN7A-0011-R6b-SM-9QEHW 40-49 years, male 70.0
GTEX-Z93S-0011-R6b-SM-4RGNJ 50-59 years, male 69.9
GTEX-1EKGG-0011-R6a-SM-CL538 60-69 years, male 69.9
GTEX-1GF9V-0011-R6b-SM-CJI2Q 60-69 years, male 69.7
GTEX-12ZZZ-0011-R6b-SM-5EQ5B 60-69 years, male 69.6
GTEX-1HGF4-0011-R6a-SM-A96S1 60-69 years, male 69.5
GTEX-12WSF-0011-R6b-SM-5HL8W 70-79 years, male 69.4
GTEX-WWYW-0011-R6A-SM-3NB3G 50-59 years, female 69.3
GTEX-X585-0011-R6A-SM-46MVJ 50-59 years, male 69.2
GTEX-1IKK5-0011-R6b-SM-A9SLY 60-69 years, male 69.1
GTEX-1J8Q2-0011-R6a-SM-CKZPG 60-69 years, male 69.1
GTEX-X4XX-0011-R6B-SM-46MWP 60-69 years, male 68.7
GTEX-1B8SF-0011-R6b-SM-7MXUD 60-69 years, male 68.4
GTEX-WVLH-0011-R6A-SM-3MJFZ 50-59 years, male 68.3
GTEX-13N2G-0011-R6b-SM-5MR3P 60-69 years, male 67.9
GTEX-NPJ7-0011-R6a-SM-2I3G7 60-69 years, female 67.6
GTEX-1LH75-0011-R6a-SM-EXURS 50-59 years, female 67.6
GTEX-1GF9W-0011-R6b-SM-9QEIE 60-69 years, male 67.3
GTEX-1H3NZ-0011-R6b-SM-A9G1N 60-69 years, male 66.8
GTEX-18465-0011-R6a-SM-7LG6M 50-59 years, male 66.4
GTEX-R55E-0011-R6A-SM-2TC5T 20-29 years, male 66.2
GTEX-NPJ8-0011-R6a-SM-2HMKB 40-49 years, male 66.1
GTEX-17HHY-0011-R6b-SM-7189Z 50-59 years, male 66.0
GTEX-144GO-0011-R6b-SM-5S2V7 60-69 years, male 65.9
GTEX-15EO6-0011-R6a-SM-7KULK 50-59 years, male 65.8
GTEX-144GL-0011-R6a-SM-5P9HW 50-59 years, male 65.2
GTEX-Y8DK-0011-R6A-SM-4V6EG 60-69 years, male 65.1
GTEX-1192X-0011-R6a-SM-DNZZB 50-59 years, male 65.1
GTEX-147F4-0011-R6b-SM-5S2UP 50-59 years, male 64.5
GTEX-QMR6-0011-R6A-SM-32PKP 50-59 years, male 64.3
GTEX-ZE9C-0011-R6a-SM-4WWCW 60-69 years, male 64.0
GTEX-14BIM-0011-R6b-SM-5S2VB 60-69 years, female 63.9
GTEX-1J1OQ-0011-R6a-SM-ARU86 40-49 years, female 63.9
GTEX-1E1VI-0011-R6a-SM-9OSVJ 50-59 years, male 63.4
GTEX-1H1CY-0011-R6b-SM-CE6RP 60-69 years, female 63.3
GTEX-13JVG-0011-R6a-SM-5MR3E 60-69 years, male 63.0
GTEX-P44G-0011-R6A-SM-2XCD3 30-39 years, male 63.0
GTEX-XMD1-0011-R6A-SM-4AT5K 60-69 years, male 62.9
GTEX-1C6VR-0011-R6a-SM-7MXU8 60-69 years, male 62.9
GTEX-13FLW-0011-R6b-SM-5L3EN 50-59 years, male 62.7
GTEX-13QJC-0011-R6a-SM-5S2VI 60-69 years, female 62.5
GTEX-13S7M-0011-R6b-SM-5O9D8 60-69 years, female 62.2
GTEX-17F97-0011-R6a-SM-7EPGS 50-59 years, male 62.1
GTEX-1JJEA-0011-R6a-SM-EXUS1 60-69 years, male 62.0
GTEX-1RLM8-0011-R6a-SM-EYYXS 50-59 years, male 61.4
GTEX-1HUB1-0011-R6b-SM-ARU6W 60-69 years, male 60.9
GTEX-13O3O-0011-R6b-SM-5P9GY 60-69 years, female 60.7
GTEX-1GZ2Q-0011-R6a-SM-9OSWM 40-49 years, male 60.7
GTEX-1MA7X-0011-R6a-SM-EYYWR 60-69 years, male 60.5
GTEX-UTHO-0011-R6A-SM-3GIJW 60-69 years, male 60.4
GTEX-132Q8-0011-R6a-SM-5K7YN 60-69 years, male 60.2
GTEX-QVUS-0011-R6A-SM-3GACX 60-69 years, female 60.2
GTEX-1N2DW-0011-R6a-SM-EZ6MW 50-59 years, male 60.2
GTEX-15DCD-0011-R6b-SM-6M46L 70-79 years, female 59.7
GTEX-1H1DG-0011-R6a-SM-A9SK8 70-79 years, male 59.4
GTEX-12584-0011-R6a-SM-5NQ7C 40-49 years, male 59.3
GTEX-1F6I4-0011-R6a-SM-CE6R4 60-69 years, male 59.3
GTEX-1I1GS-0011-R6b-SM-CMKHE 60-69 years, male 59.3
GTEX-1A3MX-0011-R6a-SM-7P8S9 60-69 years, male 58.4
GTEX-T6MN-0011-R6A-SM-32QP8 50-59 years, male 57.9
GTEX-1399T-0011-R6b-SM-5K7YL 60-69 years, male 57.8
GTEX-11TTK-0011-R6b-SM-DNZZW 60-69 years, female 57.3
GTEX-1IL2U-0011-R6a-SM-ARZLG 60-69 years, male 57.0
GTEX-1GN2E-0011-R6b-SM-9QEII 60-69 years, male 56.7
GTEX-13JUV-0011-R6b-SM-5LZYG 40-49 years, female 56.2
GTEX-11ONC-0011-R6a-SM-DO12A 60-69 years, male 56.2
GTEX-T5JC-0011-R6A-SM-D3L87 20-29 years, male 56.1
GTEX-145LU-0011-R6a-SM-5S2V6 50-59 years, male 55.5
GTEX-1HBPI-0011-R6b-SM-A9G1T 50-59 years, male 55.3
GTEX-1I1HK-0011-R6b-SM-CM2T9 60-69 years, male 55.3
GTEX-ZXG5-0011-R6a-SM-57WBZ 60-69 years, male 55.0
GTEX-1CB4H-0011-R6b-SM-CKZNK 60-69 years, female 55.0
GTEX-14ASI-0011-R6a-SM-5S2UZ 60-69 years, male 54.2
GTEX-14PQA-0011-R6b-SM-6AJAM 50-59 years, female 53.8
GTEX-ZVZQ-0011-R6b-SM-57WAY 60-69 years, female 53.8
GTEX-RU72-0011-R6A-SM-2TF71 50-59 years, female 53.4
GTEX-13112-0011-R6b-SM-5DUVK 50-59 years, male 52.5
GTEX-12WSE-0011-R6b-SM-5LZV5 20-29 years, male 52.4
GTEX-13OW8-0011-R6b-SM-5L3I3 60-69 years, male 51.8
GTEX-1GMR8-0011-R6b-SM-CE6RC 50-59 years, female 51.4
GTEX-1LB8K-0011-R6a-SM-EXURT 50-59 years, male 51.4
GTEX-16XZZ-0011-R6a-SM-7IGNE 60-69 years, male 51.2
GTEX-1H3O1-0011-R6b-SM-CL54U 60-69 years, male 51.1
GTEX-1LVA9-0011-R6a-SM-EYYWH 50-59 years, male 50.6
GTEX-17JCI-0011-R6a-SM-72D6D 60-69 years, female 50.4
GTEX-ZV68-0011-R6a-SM-51MSR 50-59 years, female 50.2
GTEX-183WM-0011-R6b-SM-72D66 70-79 years, female 50.0
GTEX-11O72-0011-R6a-SM-DNZZQ 40-49 years, male 49.9
GTEX-1I19N-0011-R6b-SM-CY8GC 70-79 years, male 49.7
GTEX-1H23P-0011-R6b-SM-A9G1H 60-69 years, male 49.4
GTEX-1C64N-0011-R6a-SM-7IGO9 50-59 years, male 49.1
GTEX-1H4P4-0011-R6a-SM-ARZLR 50-59 years, male 48.3
GTEX-13OVJ-0011-R6b-SM-5L3GH 50-59 years, female 48.2
GTEX-15G19-0011-R6b-SM-7KUM3 60-69 years, male 47.5
GTEX-1445S-0011-R6b-SM-5PNUF 60-69 years, male 47.3
GTEX-X261-0011-R6B-SM-4E3J8 50-59 years, male 47.1
GTEX-1EH9U-0011-R6a-SM-CJI2C 60-69 years, male 46.8
GTEX-QDT8-0011-R6A-SM-32PKI 30-39 years, female 46.4
GTEX-13SLW-0011-R6a-SM-5O9BH 70-79 years, male 46.3
GTEX-1F75B-0011-R6a-SM-ARZMI 50-59 years, male 46.1
GTEX-1IKOH-0011-R6b-SM-A9G1W 60-69 years, female 46.1
GTEX-1IGQW-0011-R6a-SM-CM2TC 60-69 years, male 45.3
GTEX-13FHP-0011-R6b-SM-5LZY6 50-59 years, male 45.1
GTEX-1H3VE-0011-R6b-SM-A9G1M 40-49 years, male 44.8
GTEX-1LC47-0011-R6b-SM-EZ6MI 60-69 years, male 44.6
GTEX-14LZ3-0011-R6a-SM-D3L8C 60-69 years, female 44.3
GTEX-131XW-0011-R6b-SM-5K7XY 50-59 years, female 43.9
GTEX-12WSM-0011-R6b-SM-5EQ6N 60-69 years, male 43.8
GTEX-1BAJH-0011-R6b-SM-7MXT2 70-79 years, male 42.9
GTEX-16Z82-0011-R6a-SM-7IGLV 60-69 years, male 42.6
GTEX-ZE7O-0011-R6a-SM-57WCI 50-59 years, female 42.4
GTEX-1E2YA-0011-R6b-SM-CE6R2 50-59 years, male 42.2
GTEX-13OVH-0011-R6b-SM-5LUAX 70-79 years, male 41.7
GTEX-1A8G6-0011-R6b-SM-7P8PE 60-69 years, male 41.5
GTEX-P44H-0011-R6A-SM-2XCF3 40-49 years, male 40.3
GTEX-ZVT3-0011-R6a-SM-51MSU 60-69 years, female 40.2
GTEX-12ZZW-0011-R6a-SM-5DUVZ 50-59 years, male 40.1
GTEX-13IVO-0011-R6b-SM-5K7X9 70-79 years, male 39.3
GTEX-13OW5-0011-R6b-SM-5O9BW 60-69 years, male 39.2
GTEX-S7PM-0011-R6A-SM-3NM8F 60-69 years, male 39.2
GTEX-1GZHY-0011-R6a-SM-9OSWL 50-59 years, female 38.6
GTEX-14PHW-0011-R6b-SM-5YYAR 60-69 years, female 37.7
GTEX-17EVQ-0011-R6a-SM-7189U 70-79 years, male 37.6
GTEX-X4EP-0011-R6A-SM-3P629 60-69 years, female 37.4
GTEX-1R46S-0011-R6a-SM-EZ6N6 60-69 years, female 37.2
GTEX-1HBPM-0011-R6b-SM-ARU73 60-69 years, female 36.9
GTEX-13PDP-0011-R6b-SM-5O9D5 60-69 years, male 36.8
GTEX-1GMRU-0011-R6b-SM-A9G3B 50-59 years, male 35.9
GTEX-145MI-0011-R6a-SM-5PNZA 60-69 years, female 35.6
GTEX-PWO3-0011-R6A-SM-2I5F3 60-69 years, female 35.5
GTEX-ZF28-0011-R6a-SM-4WKHI 60-69 years, male 35.5
GTEX-13PL6-0011-R6a-SM-5O9C5 40-49 years, female 35.4
GTEX-11WQC-0011-R6a-SM-5BC77 60-69 years, male 34.7
GTEX-X4XY-0011-R6B-SM-46MVB 60-69 years, male 34.0
GTEX-1CB4J-0011-R6b-SM-9WG7B 60-69 years, male 33.4
GTEX-OHPN-0011-R6A-SM-2I5FH 60-69 years, female 32.6
GTEX-139TS-0011-R6a-SM-5J2OB 60-69 years, male 31.8
GTEX-1F88E-0011-R6a-SM-CKZNW 60-69 years, female 31.8
GTEX-1EWIQ-0011-R6a-SM-ARU8G 70-79 years, female 30.9
GTEX-14753-0011-R6b-SM-5S2UD 60-69 years, male 11.2
Show allShow less
Brain - Putamen (basal ganglia)
Average nTPM: 66.9
Samples: 205

Max nTPM: 134.9
Min nTPM: 31.7
Std nTPM: 16.0
Median nTPM: 65.7
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 134.9
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 106.8
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 105.9
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 105.3
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 98.0
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 96.3
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 95.9
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 95.8
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 95.6
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 95.5
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 94.6
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 94.6
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 91.9
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 90.7
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 90.7
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 89.9
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 89.5
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 88.6
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 88.0
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 88.0
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 87.3
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 86.2
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 85.7
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 85.5
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 85.3
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 84.7
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 84.6
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 84.0
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 83.9
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 83.8
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 83.5
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 83.4
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 82.9
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 82.5
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 81.6
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 81.6
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 81.1
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 80.8
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 80.7
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 80.4
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 80.3
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 80.2
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 80.0
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 79.5
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 79.4
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 78.9
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 78.9
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 78.3
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 78.0
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 77.9
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 77.7
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 77.3
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 77.2
GTEX-S7SE-0011-R7A-SM-2XCDI 50-59 years, male 77.2
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 76.7
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 76.6
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 76.5
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 76.3
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 75.8
GTEX-R55E-0011-R7A-SM-2TC5Z 20-29 years, male 75.8
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 75.6
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 75.5
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 75.3
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 74.9
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 74.6
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 74.5
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 74.1
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 73.9
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 73.7
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 73.4
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 73.2
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 72.7
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 72.3
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 72.2
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 71.7
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 71.5
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 71.2
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 71.1
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 70.9
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 70.9
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 70.7
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 70.3
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 70.2
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 70.1
GTEX-NPJ8-0011-R7a-SM-2HMJV 40-49 years, male 70.1
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 69.5
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 69.2
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 68.9
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 68.8
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 68.7
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 68.3
GTEX-1J1OQ-0011-R7b-SM-ARU87 40-49 years, female 68.2
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 67.7
GTEX-18464-0011-R7b-SM-731CM 50-59 years, male 67.5
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 67.2
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 67.1
GTEX-QVJO-0011-R7A-SM-2S1QO 60-69 years, female 67.1
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 66.8
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 66.6
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 66.3
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 66.0
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 65.8
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 65.7
GTEX-1IOXB-0011-R7b-SM-CE6SM 50-59 years, male 65.6
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 65.2
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 65.2
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 65.0
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 64.8
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 64.7
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 64.5
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 64.3
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 64.1
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 64.0
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 63.9
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 63.7
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 63.7
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 63.6
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 63.2
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 63.0
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 63.0
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 62.7
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 62.3
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 62.3
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 61.9
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 61.6
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 61.6
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 61.4
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 61.3
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 61.3
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 61.2
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 61.2
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 60.8
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 60.7
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 60.5
GTEX-N7MS-0011-R7a-SM-2HMKN 60-69 years, male 60.5
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 60.3
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 60.0
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 59.8
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 59.7
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 59.4
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 59.2
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 59.1
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 59.0
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 58.7
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 58.3
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 58.2
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 58.2
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 57.9
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 57.8
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 57.6
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 57.3
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 57.1
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 57.1
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 57.0
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 56.9
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 56.9
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 56.8
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 56.1
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 55.7
GTEX-P44G-0011-R7A-SM-2I3F9 30-39 years, male 55.7
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 55.2
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 55.2
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 53.5
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 53.4
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 53.1
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 52.8
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 52.7
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 51.5
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 51.4
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 51.0
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 50.9
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 50.8
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 50.5
GTEX-TSE9-0011-R7A-SM-3DB7P 60-69 years, female 50.5
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 50.1
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 48.5
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 47.5
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 46.8
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 46.4
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 46.2
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 46.2
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 45.8
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 45.5
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 45.2
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 44.9
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 44.8
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 44.7
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 44.6
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 44.6
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 44.5
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 43.9
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 43.4
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 43.0
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 42.2
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 41.9
GTEX-NL3H-0011-R7a-SM-2I3G5 60-69 years, male 41.9
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 41.7
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 40.2
GTEX-OHPN-0011-R7A-SM-2I5FI 60-69 years, female 39.8
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 39.7
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 39.3
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 38.5
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 37.1
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 34.8
GTEX-RU72-0011-R7A-SM-2TF5U 50-59 years, female 31.7
Show allShow less

BASAL GANGLIA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

135.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 97.4
FF:10164-103B2 76 years, female 97.4
Nucleus accumbens
Scaled Tags Per Million: 135.6
FF:10037-101F1 23-56 years, mixed 135.6
Putamen
Scaled Tags Per Million: 121.8
FF:10176-103C5 60 years, female 121.8
Globus pallidus
Scaled Tags Per Million: 112.3
FF:10161-103A8 76 years, female 121.1
FF:10175-103C4 60 years, female 103.5

BASAL GANGLIA - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

85.0
Pig sample Sample description nTPM
Caudate
nTPM: 57.9
Samples: 4

Max nTPM: 62.7
Min nTPM: 53.6
Sample A Female 53.6
Sample B Female 62.7
Sample C Male 60.4
Sample D Male 55.0
Putamen
nTPM: 82.4
Samples: 4

Max nTPM: 107.1
Min nTPM: 53.9
Sample A Female 107.1
Sample B Female 53.9
Sample C Male 81.3
Sample D Male 87.4
Septum
nTPM: 79.3
Samples: 4

Max nTPM: 99.4
Min nTPM: 65.2
Sample A Female 76.6
Sample B Female 65.2
Sample C Male 99.4
Sample D Male 75.8
Ventral pallidum
nTPM: 85.0
Samples: 4

Max nTPM: 132.8
Min nTPM: 52.4
Sample A Female 52.4
Sample B Female 73.0
Sample C Male 132.8
Sample D Male 81.7

BASAL GANGLIA - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

305.9
Mouse sample Sample description nTPM
Caudate putamen
nTPM: 246.8
Samples: 4

Max nTPM: 256.3
Min nTPM: 230.6
Sample A Male 230.6
Sample B Male 250.2
Sample C Female 256.3
Sample D Female 249.9
Septum
nTPM: 259.9
Samples: 4

Max nTPM: 295.4
Min nTPM: 240.6
Sample A Male 295.4
Sample B Male 247.6
Sample C Female 255.8
Sample D Female 240.6
Ventral forebrain
nTPM: 305.9
Samples: 4

Max nTPM: 326.8
Min nTPM: 286.8
Sample A Male 306.0
Sample B Male 286.8
Sample C Female 326.8
Sample D Female 303.9

BASAL GANGLIA - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

18.7
Allen experiment id Experiment description Expression energy
Striatum
Expression energy: 18.7
2033 Antisense, RP_Baylor_102631, Mouse strain C57BL/6J (56 days, male) 18.7
2034 Antisense, RP_Baylor_102631, Mouse strain C57BL/6J (56 days, male) 18.7
Pallidum
Expression energy: 17.6
2034 Antisense, RP_Baylor_102631, Mouse strain C57BL/6J (56 days, male) 17.6
2033 Antisense, RP_Baylor_102631, Mouse strain C57BL/6J (56 days, male) 16.6

Contact

  • NEWS ARTICLES
  • PRESS ROOM

The Project

  • INTRODUCTION
  • ORGANIZATION
  • PUBLICATIONS

The Human Protein Atlas

  • DOWNLOADABLE DATA
  • LICENCE & CITATION
  • HELP & FAQ
The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.


contact@proteinatlas.org