We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
B2M
HPA
RESOURCES
  • TISSUE
  • BRAIN
  • SINGLE CELL
  • SUBCELLULAR
  • CANCER
  • BLOOD
  • CELL LINE
  • STRUCTURE & INTERACTION
ABOUT
  • INTRODUCTION
  • HISTORY
  • ORGANIZATION
  • PUBLICATIONS
  • ANTIBODY SUBMISSION
  • ANTIBODY AVAILABILITY
  • ACKNOWLEDGMENTS
  • CONTACT
NEWS
  • NEWS ARTICLES
  • PRESS ROOM
LEARN
  • DICTIONARY
  • PROTEIN CLASSES
  • PROTEIN EVIDENCE
  • METHODS
  • EDUCATIONAL VIDEOS
DATA
  • DOWNLOADABLE DATA
  • PUBLICATION DATA
  • RELEASE HISTORY
HELP
  • ANTIBODY VALIDATION
  • ASSAYS & ANNOTATION
  • DISCLAIMER
  • HELP & FAQ
  • PRIVACY STATEMENT
  • LICENCE & CITATION
Fields »
Search result

Field
Term
Gene name
Class
Subclass
Class
Keyword
Chromosome
External id
Tissue
Cell type
Expression
Antibody panel
Tissue
Main location
Patient ID
Annotation
Tissue
Category
Tau score
Cluster
Reliability
Brain region
Category
Tau score
Brain region
Category
Tau score
Brain region
Category
Tau score
Cluster
Reliability
Tissue
Cell type
Enrichment
Cell type
Category
Tau score
Cell type
Category
Tau score
Cell type
Category
Tau score
Cell lineage
Category
Tau score
Cluster
Cluster
Location
Searches
Location
Cell line
Class
Type
Phase
Reliability
Cancer
Prognosis
Cancer
Category
Cancer
Category
Tau score
Cluster
Variants
Interacting gene (ensg_id)
Type
Number of interactions
Pathway
Category
Score
Score
Score
Validation
Validation
Validation
Validation
Antibodies
Data type
Column


  • SUMMARY

  • TISSUE

  • BRAIN

  • SINGLE CELL

  • SUBCELL

  • CANCER

  • BLOOD

  • CELL LINE

  • STRUCT & INT

  • B2M
CANCER LUNG CANCER Show tissue menu
BREAST CANCER CARCINOID CERVICAL CANCER COLORECTAL CANCER ENDOMETRIAL CANCER GLIOMA HEAD AND NECK CANCER LIVER CANCER LUNG CANCER LYMPHOMA
MELANOMA OVARIAN CANCER PANCREATIC CANCER PROSTATE CANCER RENAL CANCER SKIN CANCER STOMACH CANCER TESTIS CANCER THYROID CANCER UROTHELIAL CANCER
LUAD TCGA LUAD VALIDATION LUSC TCGA LUSC VALIDATION PROTEIN LUAD CPTAC PROTEIN LUSC CPTAC PROTEIN EXPRESSION
ANTIBODIES
AND
VALIDATION
Dictionary
Lung cancer
Human cancer
Lung adenocarcinoma
Lung squamous cell carcinoma
LUNG ADENOCARCINOMA (TCGA) - Interactive survival scatter ploti

The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.

The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".

Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.

Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.

& Survival analysisi

Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.

B2M is not prognostic in Lung Adenocarcinoma (TCGA)


Stage:


Survival analysis
Current cut offi

Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.

:
Best expression cut offi

Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .

When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.

: 2872.47
Median expressioni

Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.

: N/A
Median follow up timei

Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.

: N/A
P scorei

Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.

N/A
5-year survival highi

5-year survival for patients with higher expression than the expression cutoff.

For melanoma and glioma, 3-year survival is shown.

N/A
5-year survival lowi

5-year survival for patients with lower expression than the expression cutoff.

For melanoma and glioma, 3-year survival is shown.

N/A
TCGA RNA samplesi

RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.

Average pTPM 4789.8
Number of samples 497
Samples
Sample Description pTPM
TCGA-05-4403-01A 76 years, male, stage:Stage IB, alive, 578 days 19164.9
TCGA-62-8402-01A 73 years, female, white, stage:Stage IIIA, dead, 1498 days 14642.6
TCGA-83-5908-01A 59 years, female, white, stage:Stage IA, alive, 824 days 14516.5
TCGA-05-4433-01A 82 years, male, stage:Stage IB, alive, 730 days 14257.1
TCGA-69-7761-01A 84 years, male, white, stage:Stage IB, alive, 186 days 12921.4
TCGA-44-6779-01A 50 years, female, white, stage:Stage IIB, dead, 500 days 12801.7
TCGA-97-7552-01A 70 years, male, white, stage:Stage IB, alive, 1932 days 12693.8
TCGA-50-5068-01A 59 years, female, white, stage:Stage IIB, dead, 1499 days 12350.8
TCGA-67-3773-01A 84 years, female, white, stage:Stage IB, alive, 427 days 12000.0
TCGA-64-5778-01A 60 years, male, white, stage:Stage IB, alive, 1305 days 11713.7
TCGA-44-3398-01A 77 years, female, white, stage:Stage IA, alive, 1163 days 11203.1
TCGA-55-6978-01A 81 years, male, white, stage:Stage IIA, dead, 176 days 11103.7
TCGA-38-A44F-01A 80 years, male, white, stage:Stage IB, alive, 133 days 11023.2
TCGA-67-3774-01A 73 years, female, white, stage:Stage IB, alive, 385 days 10787.2
TCGA-55-7227-01A 77 years, male, white, stage:Stage IIIA, dead, 952 days 10641.7
TCGA-55-8205-01A 76 years, female, white, stage:Stage IIA, alive, 599 days 10152.1
TCGA-75-5147-01A female, stage:Stage IB, alive, 1333 days 9998.6
TCGA-86-7954-01A 68 years, female, white, stage:Stage IB, alive, 605 days 9982.3
TCGA-86-A4P8-01A 59 years, female, white, stage:Stage IIIA, alive, 805 days 9915.1
TCGA-35-4122-01A 69 years, male, white, stage:Stage IA, alive, 225 days 9905.4
TCGA-55-8299-01A 61 years, female, white, stage:Stage IA, dead, 469 days 9764.8
TCGA-35-4123-01A 38 years, male, white, stage:Stage IA, alive, 182 days 9734.9
TCGA-05-4422-01A 68 years, male, stage:Stage IB, alive, 365 days 9673.8
TCGA-44-2656-01A 59 years, male, white, stage:Stage IB, alive, 1429 days 9555.2
TCGA-97-A4M6-01A 45 years, female, white, stage:Stage IA, alive, 568 days 9441.5
TCGA-05-4434-01A 67 years, female, stage:Stage IV, dead, 457 days 9335.6
TCGA-05-5420-01A 67 years, male, stage:Stage IIIA, alive, 457 days 9310.9
TCGA-55-1596-01A 55 years, male, asian, stage:Stage IIB, alive, 2065 days 9191.0
TCGA-55-8092-01A 75 years, male, white, stage:Stage IIB, dead, 154 days 9107.8
TCGA-69-8453-01A 77 years, male, white, stage:Stage IIB, alive, 813 days 9093.1
TCGA-73-7499-01A 81 years, female, white, stage:Stage IB, dead, 1531 days 9046.9
TCGA-44-6145-01A 62 years, female, white, stage:Stage IA, alive, 595 days 9043.5
TCGA-05-4250-01A 79 years, female, stage:Stage IIIA, dead, 121 days 9015.9
TCGA-44-2661-01A 69 years, female, white, stage:Stage IA, alive, 1159 days 8992.5
TCGA-99-7458-01A 74 years, female, white, stage:Stage IIIA, alive, 747 days 8941.5
TCGA-80-5611-01A male, stage:Stage IB, alive, 2595 days 8876.3
TCGA-97-7553-01A 58 years, female, white, stage:Stage IA, alive, 1870 days 8797.6
TCGA-67-6217-01A 73 years, female, white, stage:Stage IIA, alive, 422 days 8793.2
TCGA-05-5429-01A 60 years, male, stage:Stage IIIA, dead, 275 days 8790.9
TCGA-05-4396-01A 76 years, male, stage:Stage IIIB, dead, 303 days 8697.9
TCGA-67-3770-01A 70 years, female, white, stage:Stage IA, alive, 610 days 8626.0
TCGA-L4-A4E6-01A 67 years, male, white, stage:Stage IA, alive, 435 days 8599.0
TCGA-53-7624-01A 40 years, female, white, stage:Stage IV, dead, 1043 days 8579.0
TCGA-44-3918-01A 60 years, female, white, stage:Stage IA, alive, 1036 days 8565.4
TCGA-86-8280-01A 54 years, female, white, stage:Stage IIA, alive, 701 days 8554.2
TCGA-50-6594-01A 79 years, female, black or african american, stage:Stage IIIA, dead, 370 days 8499.6
TCGA-55-6982-01A 79 years, female, white, stage:Stage IIB, dead, 995 days 8493.8
TCGA-44-2665-01A 55 years, female, white, stage:Stage IIB, alive, 1301 days 8487.6
TCGA-38-4629-01A 68 years, male, white, stage:Stage IIB, dead, 864 days 8475.4
TCGA-86-A456-01A 78 years, female, asian, stage:Stage IA, alive, 896 days 8461.7
TCGA-99-8028-01A 50 years, female, black or african american, stage:Stage IA, alive, 1118 days 8407.9
TCGA-86-8671-01A 72 years, female, white, stage:Stage IIB, alive, 839 days 8345.9
TCGA-55-6712-01A 71 years, male, white, stage:Stage IIA, dead, 171 days 8341.4
TCGA-55-8089-01A 56 years, male, white, stage:Stage IA, dead, 702 days 8172.5
TCGA-49-4505-01A 61 years, female, white, stage:Stage IIB, dead, 428 days 8127.5
TCGA-05-4425-01A 70 years, female, stage:Stage IV, alive, 669 days 8125.4
TCGA-86-8672-01A 59 years, male, white, stage:Stage IIB, dead, 19 days 8111.9
TCGA-50-5941-01A 55 years, female, white, stage:Stage IIIA, alive, 1474 days 8063.0
TCGA-64-5781-01A 55 years, female, white, stage:Stage IB, alive, 1559 days 8034.3
TCGA-93-A4JP-01A 64 years, male, asian, stage:Stage IV, alive, 578 days 8022.8
TCGA-MP-A4TI-01A 72 years, male, white, stage:Stage IIA, dead, 429 days 8015.5
TCGA-55-8301-01A 58 years, male, white, stage:Stage IB, alive, 534 days 7916.7
TCGA-78-7160-01A 61 years, male, white, stage:Stage IV, dead, 697 days 7899.9
TCGA-55-8085-01A 64 years, male, white, stage:Stage IA, alive, 904 days 7755.6
TCGA-97-A4M5-01A 83 years, male, white, stage:Stage IA, alive, 634 days 7742.8
TCGA-50-5049-01A 70 years, male, white, stage:Stage IA, alive, 3094 days 7708.9
TCGA-44-2668-01A 51 years, male, white, stage:Stage IB, dead, 761 days 7697.0
TCGA-55-8621-01A 75 years, female, white, stage:Stage IA, alive, 515 days 7607.3
TCGA-MP-A4TC-01A 77 years, male, white, stage:Stage IIIA, dead, 74 days 7442.6
TCGA-64-1676-01A 58 years, male, white, stage:Stage IA, alive, 1728 days 7383.2
TCGA-49-6744-01A 64 years, female, white, stage:Stage IIA, alive, 1683 days 7372.6
TCGA-MN-A4N5-01A 63 years, male, white, stage:Stage IA, alive, 84 days 7318.4
TCGA-91-7771-01A 62 years, male, white, stage:Stage IIB, alive, 492 days 7297.2
TCGA-78-7542-01A 56 years, male, white, stage:Stage IB, dead, 321 days 7245.1
TCGA-55-6979-01A 59 years, female, white, stage:Stage IIB, dead, 237 days 7240.8
TCGA-55-7816-01A 49 years, female, white, stage:Stage IV, dead, 468 days 7218.0
TCGA-MP-A4TJ-01A 62 years, female, stage:Stage IA, dead, 339 days 7197.5
TCGA-44-A47G-01A 73 years, female, white, stage:Stage IA, alive, 351 days 7185.5
TCGA-38-4627-01A 64 years, female, white, stage:Stage IIA, dead, 1147 days 7181.8
TCGA-55-6980-01A 56 years, male, white, stage:Stage IA, alive, 2109 days 7175.4
TCGA-55-8091-01A 74 years, male, white, stage:Stage IB, alive, 600 days 7172.4
TCGA-50-6592-01A 71 years, female, white, stage:Stage IB, dead, 777 days 7129.2
TCGA-38-7271-01A 72 years, female, white, stage:Stage IA, dead, 800 days 7115.6
TCGA-44-7661-01A 69 years, female, white, stage:Stage IB, dead, 557 days 7071.8
TCGA-05-5423-01A 65 years, male, stage:Stage IIB, alive, 151 days 7064.8
TCGA-97-A4LX-01A 81 years, male, white, stage:Stage IB, alive, 614 days 7059.1
TCGA-64-1681-01A 61 years, female, white, stage:Stage IA, dead, 1167 days 6988.0
TCGA-49-4501-01A 67 years, female, white, stage:Stage IB, dead, 1421 days 6973.8
TCGA-91-6835-01A 81 years, female, white, stage:Stage IA, alive, 79 days 6973.7
TCGA-44-3919-01A 71 years, female, white, stage:Stage IA, dead, 1026 days 6969.1
TCGA-38-4625-01A 66 years, female, white, stage:Stage IB, alive, 2973 days 6963.1
TCGA-50-5933-01A 72 years, male, white, stage:Stage IIIB, dead, 2393 days 6921.1
TCGA-97-8175-01A 55 years, female, white, stage:Stage IB, alive, 551 days 6835.7
TCGA-55-8208-01A 73 years, female, white, stage:Stage IA, alive, 674 days 6825.9
TCGA-73-4666-01A 52 years, female, white, stage:Stage IV, alive, 800 days 6802.8
TCGA-78-7148-01A 71 years, male, white, stage:Stage IIB, dead, 626 days 6784.8
TCGA-05-4430-01A 59 years, female, stage:Stage IB, alive, 761 days 6782.1
TCGA-44-6777-01A 85 years, female, white, stage:Stage IB, dead, 987 days 6769.3
TCGA-44-6778-01A 59 years, male, black or african american, stage:Stage IA, alive, 1864 days 6768.0
TCGA-99-AA5R-01A 70 years, female, black or african american, stage:Stage IA, alive, 658 days 6715.0
TCGA-50-5045-01A 57 years, female, black or african american, stage:'--, dead, 2174 days 6679.1
TCGA-MP-A4T4-01A 68 years, female, white, stage:Stage IIB, dead, 2617 days 6642.9
TCGA-95-7947-01A 67 years, male, white, stage:Stage IA, alive, 477 days 6590.1
TCGA-J2-A4AE-01A 77 years, female, white, stage:Stage IA, alive, 1079 days 6558.0
TCGA-55-7724-01A 76 years, female, white, stage:Stage IB, alive, 705 days 6536.4
TCGA-50-5066-01A 72 years, male, black or african american, stage:Stage IB, alive, 1442 days 6478.4
TCGA-05-4418-01A 69 years, male, stage:Stage IIIA, dead, 274 days 6475.7
TCGA-05-4427-01A 65 years, female, stage:Stage IIB, alive, 791 days 6471.8
TCGA-55-7815-01A 76 years, male, stage:Stage IB, alive, 773 days 6444.2
TCGA-69-7978-01A 59 years, male, white, stage:Stage IIB, alive, 134 days 6429.3
TCGA-44-5645-01A 61 years, female, black or african american, stage:Stage IA, alive, 852 days 6385.0
TCGA-95-8039-01A 72 years, male, white, stage:Stage IA, alive, 830 days 6372.4
TCGA-78-7539-01A 75 years, female, white, stage:Stage IIA, alive, 791 days 6358.5
TCGA-55-7727-01A 70 years, male, white, stage:Stage IIIA, alive, 119 days 6330.5
TCGA-50-5935-01A 86 years, female, white, stage:Stage IA, dead, 653 days 6306.8
TCGA-53-7626-01A 76 years, female, white, stage:Stage IIA, dead, 929 days 6274.2
TCGA-44-2655-01A 65 years, female, white, stage:Stage IA, alive, 1324 days 6273.8
TCGA-55-7573-01A 72 years, female, white, stage:Stage IA, alive, 487 days 6271.5
TCGA-97-A4M0-01A 60 years, female, white, stage:Stage IB, alive, 652 days 6263.1
TCGA-75-5125-01A male, stage:Stage IIB, dead, 2027 days 6239.7
TCGA-J2-8192-01A 65 years, female, white, stage:Stage IIA, alive, 739 days 6231.2
TCGA-78-7540-01A 66 years, female, white, stage:Stage IB, dead, 1197 days 6229.4
TCGA-93-7347-01A 76 years, female, white, stage:Stage IA, alive, 683 days 6193.7
TCGA-05-5425-01A 68 years, male, stage:Stage IIB, alive, 882 days 6163.6
TCGA-55-8302-01A 54 years, male, white, stage:Stage IB, alive, 478 days 6158.5
TCGA-55-7995-01A 73 years, female, white, stage:Stage IA, alive, 889 days 6125.6
TCGA-69-8254-01A 85 years, male, white, stage:'--, alive, 409 days 6106.0
TCGA-69-7765-01A 56 years, male, black or african american, stage:'--, alive, 165 days 6095.8
TCGA-55-8619-01A 72 years, female, white, stage:Stage IIB, alive, 416 days 6057.0
TCGA-86-8074-01A 62 years, female, white, stage:Stage IIA, alive, 24 days 6047.8
TCGA-62-A46R-01A 54 years, female, white, stage:Stage IB, dead, 1725 days 6038.9
TCGA-49-4488-01A 74 years, female, white, stage:Stage IA, dead, 869 days 6006.3
TCGA-95-7944-01A 71 years, male, white, stage:Stage IA, alive, 377 days 5993.5
TCGA-05-4389-01A 70 years, male, stage:Stage IA, alive, 1369 days 5992.0
TCGA-MP-A4TA-01A 75 years, female, white, stage:Stage IA, dead, 950 days 5950.5
TCGA-44-A479-01A 73 years, female, black or african american, stage:Stage IB, alive, 486 days 5937.8
TCGA-50-5055-01A 79 years, female, white, stage:Stage IIA, dead, 1830 days 5914.5
TCGA-MP-A4TH-01A 70 years, female, white, stage:Stage IA, alive, 741 days 5892.4
TCGA-44-6775-01A 72 years, female, white, stage:Stage IB, alive, 705 days 5882.3
TCGA-50-5044-01A 72 years, female, white, stage:Stage IIIB, dead, 624 days 5851.8
TCGA-78-7162-01A 75 years, male, white, stage:Stage IA, dead, 3169 days 5843.3
TCGA-73-A9RS-01A 41 years, male, black or african american, stage:Stage IIB, dead, 340 days 5837.7
TCGA-49-6745-01A 82 years, male, white, stage:Stage IIIA, alive, 522 days 5813.8
TCGA-50-6595-01A 74 years, female, white, stage:Stage IIIA, dead, 189 days 5787.5
TCGA-69-7980-01A 70 years, female, white, stage:Stage I, alive, 411 days 5742.1
TCGA-75-6214-01A female, stage:Stage IIIA, dead, 1115 days 5730.2
TCGA-97-8177-01A 59 years, female, white, stage:Stage IB, alive, 499 days 5728.4
TCGA-62-8394-01A 65 years, female, white, stage:Stage IIIB, dead, 139 days 5696.7
TCGA-86-8075-01A 66 years, female, white, stage:Stage IB, dead, 694 days 5646.0
TCGA-L9-A743-01A 56 years, male, black or african american, stage:Stage IIA, alive, 664 days 5594.6
TCGA-49-4494-01A 77 years, male, white, stage:Stage IIIA, dead, 1081 days 5578.7
TCGA-55-6971-01A 59 years, female, white, stage:Stage IB, alive, 1400 days 5548.9
TCGA-L9-A50W-01A 75 years, male, black or african american, stage:Stage IIA, dead, 442 days 5534.4
TCGA-50-5939-01A 85 years, male, white, stage:Stage IB, dead, 460 days 5529.7
TCGA-93-A4JQ-01A 49 years, male, white, stage:Stage IA, alive, 526 days 5525.9
TCGA-05-4417-01A 51 years, female, stage:Stage IB, alive, 455 days 5516.2
TCGA-05-4397-01A 65 years, male, stage:Stage IIB, dead, 731 days 5493.3
TCGA-44-3396-01A 74 years, female, white, stage:Stage IIIA, alive, 1130 days 5478.7
TCGA-05-5715-01A 69 years, female, stage:Stage IB, alive, 62 days 5430.1
TCGA-38-4626-01A 57 years, female, white, stage:'--, alive, 3674 days 5400.8
TCGA-62-A472-01A 70 years, male, white, stage:Stage IIB, alive, 910 days 5394.2
TCGA-55-7911-01A 70 years, female, white, stage:Stage IA, alive, 537 days 5381.9
TCGA-62-A46Y-01A 70 years, female, white, stage:Stage IIIA, dead, 414 days 5374.6
TCGA-49-AARR-01A 68 years, male, black or african american, stage:Stage IA, alive, 4992 days 5370.1
TCGA-05-4382-01A 68 years, male, stage:Stage IB, alive, 607 days 5363.3
TCGA-55-5899-01A 58 years, male, white, stage:'--, alive, 930 days 5351.7
TCGA-44-7662-01A 61 years, male, white, stage:Stage IB, alive, 218 days 5346.4
TCGA-67-3771-01A 77 years, female, black or african american, stage:Stage IA, alive, 610 days 5325.1
TCGA-55-8513-01A 77 years, female, white, stage:Stage IIB, alive, 791 days 5315.6
TCGA-86-8076-01A 42 years, male, white, stage:Stage IA, alive, 993 days 5307.2
TCGA-86-8278-01A 63 years, female, white, stage:Stage IIB, alive, 944 days 5297.7
TCGA-55-A48Z-01A 60 years, female, white, stage:Stage IIIB, alive, 651 days 5297.5
TCGA-44-A47A-01A 78 years, female, white, stage:Stage IB, alive, 466 days 5296.7
TCGA-55-8510-01A 55 years, female, white, stage:Stage IB, alive, 539 days 5280.9
TCGA-49-6742-01A 70 years, male, white, stage:Stage IIA, dead, 488 days 5278.0
TCGA-44-2657-01A 74 years, female, white, stage:Stage IB, alive, 1351 days 5273.8
TCGA-50-6590-01A 72 years, female, white, stage:Stage IB, dead, 1288 days 5264.1
TCGA-55-6970-01A 67 years, female, white, stage:Stage IIIA, dead, 464 days 5254.8
TCGA-55-7725-01A 68 years, female, white, stage:Stage IA, alive, 442 days 5226.2
TCGA-05-4402-01A 57 years, female, stage:Stage IV, dead, 244 days 5225.1
TCGA-55-7574-01A 64 years, female, white, stage:Stage IB, dead, 995 days 5224.3
TCGA-78-7147-01A 67 years, female, white, stage:Stage IIB, dead, 586 days 5204.6
TCGA-91-8497-01A 75 years, female, white, stage:Stage IA, dead, 434 days 5200.8
TCGA-49-4506-01A 68 years, female, white, stage:Stage IIB, dead, 999 days 5199.2
TCGA-86-7953-01A 69 years, female, white, stage:Stage IA, alive, 997 days 5184.8
TCGA-75-7025-01A male, stage:Stage IB, alive, 3305 days 5172.6
TCGA-62-8398-01A 55 years, male, white, stage:Stage IIIA, dead, 444 days 5171.0
TCGA-64-1679-01A 58 years, female, white, stage:Stage IIIA, alive, 2488 days 5166.5
TCGA-MP-A4SV-01A 67 years, male, stage:Stage IB, dead, 2620 days 5166.1
TCGA-75-6212-01A female, stage:Stage IIB, dead, 1516 days 5136.1
TCGA-95-7948-01A 42 years, female, white, stage:Stage IB, alive, 476 days 5092.8
TCGA-49-AAR3-01A 69 years, male, black or african american, stage:Stage IIB, alive, 1893 days 5088.3
TCGA-L9-A444-01A 60 years, female, white, stage:Stage IA, alive, 307 days 5070.3
TCGA-50-8459-01A 68 years, male, white, stage:Stage IIB, alive, 1119 days 5012.6
TCGA-78-7143-01A 62 years, female, white, stage:Stage IB, dead, 4961 days 4989.7
TCGA-93-A4JO-01A 70 years, male, white, stage:Stage IA, dead, 33 days 4982.8
TCGA-71-8520-01A 60 years, female, asian, stage:Stage IB, dead, 210 days 4982.3
TCGA-O1-A52J-01A 74 years, female, white, stage:Stage IA, dead, 1798 days 4969.2
TCGA-05-4398-01A 47 years, female, stage:Stage IIIB, alive, 1431 days 4957.4
TCGA-NJ-A4YQ-01A 69 years, female, white, stage:Stage IA, alive, 1432 days 4955.8
TCGA-NJ-A55A-01A 76 years, female, white, stage:Stage IB, alive, 15 days 4933.7
TCGA-44-A4SS-01A 73 years, male, white, stage:Stage IA, alive, 415 days 4932.0
TCGA-05-4426-01A 71 years, male, stage:Stage IB, alive, 791 days 4900.3
TCGA-55-6987-01A 77 years, male, white, stage:Stage IA, alive, 2137 days 4899.6
TCGA-64-5815-01A 74 years, male, white, stage:Stage IIB, alive, 866 days 4882.0
TCGA-73-4658-01A 80 years, female, white, stage:Stage IB, dead, 1600 days 4871.6
TCGA-44-4112-01A 60 years, female, white, stage:Stage IB, dead, 808 days 4856.5
TCGA-73-4662-01A 65 years, female, white, stage:Stage IA, alive, 2515 days 4839.7
TCGA-91-6830-01A 65 years, female, white, stage:Stage IIA, alive, 60 days 4833.8
TCGA-86-7701-01A 66 years, male, white, stage:Stage IV, alive, 947 days 4815.6
TCGA-91-A4BD-01A 78 years, male, white, stage:Stage IIA, alive, 603 days 4815.0
TCGA-44-7672-01A 52 years, female, white, stage:Stage IA, alive, 719 days 4803.3
TCGA-97-A4M1-01A 52 years, female, white, stage:Stage IA, alive, 601 days 4792.1
TCGA-78-8648-01A 58 years, female, stage:Stage IIB, dead, 1209 days 4780.8
TCGA-44-7659-01A 70 years, male, white, stage:Stage IA, alive, 691 days 4760.7
TCGA-05-4424-01A 70 years, male, stage:Stage IIB, alive, 913 days 4754.5
TCGA-95-8494-01A 67 years, male, white, stage:Stage IIA, alive, 84 days 4753.0
TCGA-91-6848-01A 59 years, male, white, stage:Stage IIIA, alive, 224 days 4714.6
TCGA-93-A4JN-01A 71 years, male, white, stage:Stage IV, alive, 718 days 4694.2
TCGA-97-7546-01A 76 years, female, white, stage:Stage IA, alive, 1285 days 4688.1
TCGA-91-8496-01A 63 years, female, white, stage:Stage IB, alive, 505 days 4678.7
TCGA-69-7974-01A 54 years, female, white, stage:Stage IIIA, alive, 184 days 4658.0
TCGA-55-6985-01A 58 years, female, white, stage:Stage IB, alive, 1233 days 4655.4
TCGA-44-A47B-01A 79 years, male, white, stage:Stage IB, alive, 287 days 4651.9
TCGA-86-A4P7-01A 63 years, female, white, stage:Stage IB, alive, 415 days 4643.2
TCGA-78-7163-01A 60 years, male, white, stage:Stage IB, alive, 7248 days 4608.7
TCGA-86-8055-01A 79 years, male, white, stage:Stage IIA, dead, 124 days 4602.8
TCGA-69-8255-01A 71 years, male, white, stage:Stage IA, alive, 129 days 4599.2
TCGA-78-7154-01A 72 years, male, white, stage:Stage IIIA, dead, 593 days 4580.3
TCGA-55-1592-01A 65 years, male, white, stage:Stage IA, dead, 701 days 4569.9
TCGA-91-6840-01A 59 years, female, white, stage:Stage IA, alive, 372 days 4565.7
TCGA-J2-A4AG-01A 66 years, female, white, stage:Stage IA, alive, 988 days 4558.6
TCGA-S2-AA1A-01A 68 years, female, black or african american, stage:Stage IA, alive, 513 days 4554.2
TCGA-78-7152-01A 65 years, male, white, stage:Stage IB, dead, 1215 days 4554.1
TCGA-MP-A4T9-01A 54 years, female, white, stage:Stage IIIA, dead, 1265 days 4532.0
TCGA-75-5146-01A male, stage:Stage IB, alive, 2368 days 4523.3
TCGA-55-A57B-01A 80 years, female, black or african american, stage:Stage IA, alive, 546 days 4520.7
TCGA-44-2666-01A 43 years, male, white, stage:Stage IB, dead, 97 days 4511.2
TCGA-44-6146-01A 64 years, male, white, stage:Stage IIB, alive, 728 days 4510.5
TCGA-86-8056-01A 63 years, female, white, stage:Stage IIIA, alive, 139 days 4510.2
TCGA-86-A4JF-01A 56 years, male, white, stage:Stage IIB, dead, 737 days 4472.3
TCGA-91-8499-01A 76 years, female, white, stage:Stage IA, alive, 36 days 4470.6
TCGA-64-5775-01A 71 years, male, white, stage:Stage IIIA, dead, 62 days 4469.1
TCGA-MP-A4T6-01A 76 years, female, white, stage:Stage IIIA, dead, 1790 days 4464.4
TCGA-44-6147-01A 67 years, female, white, stage:Stage IA, alive, 845 days 4451.8
TCGA-55-A4DF-01A 88 years, male, white, stage:Stage IA, dead, 440 days 4435.5
TCGA-55-7903-01A 64 years, male, white, stage:Stage IA, alive, 567 days 4429.3
TCGA-97-7547-01A 67 years, female, white, stage:Stage IB, alive, 1965 days 4349.1
TCGA-55-8204-01A 87 years, female, white, stage:Stage IB, alive, 515 days 4347.4
TCGA-97-8174-01A 67 years, male, white, stage:Stage IIA, dead, 164 days 4322.4
TCGA-86-7711-01A 70 years, male, white, stage:Stage IIA, dead, 1046 days 4297.8
TCGA-97-A4M7-01A 74 years, male, white, stage:Stage IA, alive, 629 days 4294.6
TCGA-97-7941-01A 72 years, female, white, stage:Stage IA, alive, 484 days 4240.6
TCGA-91-6828-01A 70 years, male, white, stage:Stage IA, alive, 323 days 4234.7
TCGA-97-7938-01A 76 years, female, white, stage:Stage IA, dead, 18 days 4225.2
TCGA-44-3917-01A 33 years, female, white, stage:Stage IB, alive, 1183 days 4219.8
TCGA-78-8655-01A 77 years, female, stage:Stage IA, alive, 2360 days 4214.8
TCGA-55-1594-01A 68 years, male, white, stage:Stage IIIA, alive, 1178 days 4204.7
TCGA-55-6968-01A 61 years, male, white, stage:Stage IV, dead, 1293 days 4184.7
TCGA-99-8033-01A 74 years, female, white, stage:Stage IV, dead, 656 days 4181.3
TCGA-80-5608-01A female, stage:Stage IA, alive, 2832 days 4174.2
TCGA-97-8172-01A 75 years, female, white, stage:Stage IB, alive, 545 days 4161.5
TCGA-55-8090-01A 80 years, male, white, stage:Stage IA, dead, 598 days 4160.9
TCGA-35-5375-01A 61 years, male, white, stage:Stage IIIA, alive, 264 days 4155.7
TCGA-55-7283-01A 76 years, female, white, stage:Stage IIIA, alive, 609 days 4142.0
TCGA-97-A4M2-01A 66 years, male, white, stage:Stage IA, alive, 624 days 4123.7
TCGA-49-AARN-01A 56 years, female, black or african american, stage:Stage IA, dead, 1135 days 4104.3
TCGA-55-7994-01A 81 years, male, white, stage:Stage IIB, alive, 603 days 4092.6
TCGA-97-8552-01A 55 years, female, white, stage:Stage I, alive, 626 days 4078.0
TCGA-73-4677-01A 74 years, male, white, stage:'--, dead, 38 days 4071.2
TCGA-62-A46S-01A 73 years, male, white, stage:Stage IB, dead, 1653 days 4066.4
TCGA-62-A46O-01A 65 years, female, white, stage:Stage IB, dead, 1454 days 4055.8
TCGA-L9-A5IP-01A 40 years, female, black or african american, stage:Stage IV, dead, 58 days 4042.8
TCGA-91-6829-01A 78 years, male, white, stage:Stage IB, dead, 1258 days 4017.9
TCGA-95-A4VN-01A 62 years, female, white, stage:Stage IIA, alive, 553 days 4010.3
TCGA-55-6983-01A 81 years, male, white, stage:Stage IIB, alive, 2823 days 4007.7
TCGA-05-4432-01A 66 years, male, stage:Stage IIB, alive, 761 days 3996.3
TCGA-44-2659-01A 65 years, female, white, stage:Stage IIB, alive, 1367 days 3969.3
TCGA-55-7907-01A 77 years, male, white, stage:Stage IIA, dead, 343 days 3961.8
TCGA-49-4510-01A 51 years, female, black or african american, stage:Stage IIB, dead, 896 days 3947.4
TCGA-55-6984-01A 71 years, female, white, stage:Stage IIB, dead, 760 days 3942.1
TCGA-67-3772-01A 82 years, female, white, stage:Stage IB, alive, 573 days 3925.5
TCGA-55-7726-01A 72 years, female, white, stage:Stage IA, alive, 652 days 3923.8
TCGA-86-8073-01A 58 years, male, white, stage:Stage IB, alive, 740 days 3921.2
TCGA-97-8547-01A 78 years, female, stage:Stage IIIA, alive, 657 days 3904.6
TCGA-NJ-A4YP-01A 52 years, male, white, stage:Stage IB, alive, 50 days 3902.8
TCGA-50-8457-01A 63 years, female, black or african american, stage:Stage IA, alive, 1125 days 3898.0
TCGA-L9-A443-01A 63 years, female, white, stage:Stage IA, dead, 193 days 3895.2
TCGA-49-AAR4-01A 51 years, male, black or african american, stage:Stage IIIA, dead, 879 days 3880.3
TCGA-MP-A4SW-01A 53 years, male, white, stage:Stage IIB, dead, 1778 days 3868.7
TCGA-50-7109-01A 60 years, male, white, stage:Stage IA, dead, 308 days 3857.4
TCGA-44-2662-01A 65 years, male, white, stage:Stage IB, alive, 1280 days 3847.8
TCGA-MN-A4N4-01A 57 years, male, white, stage:Stage IA, alive, 1175 days 3846.3
TCGA-55-7281-01A 70 years, female, white, stage:Stage IA, alive, 872 days 3823.5
TCGA-55-8096-01A 67 years, female, white, stage:Stage IB, dead, 719 days 3818.0
TCGA-78-7150-01A 59 years, male, white, stage:Stage IIB, dead, 666 days 3799.3
TCGA-75-6206-01A male, stage:Stage IB, alive, 2590 days 3788.2
TCGA-69-A59K-01A 60 years, female, black or african american, stage:Stage IIB, alive, 591 days 3785.7
TCGA-44-7669-01A 59 years, male, black or african american, stage:Stage IIA, dead, 574 days 3765.7
TCGA-50-5072-01A 74 years, male, white, stage:Stage IIIA, dead, 250 days 3747.4
TCGA-49-6743-01A 81 years, female, white, stage:Stage IIIA, alive, 1621 days 3734.1
TCGA-95-A4VK-01A 74 years, female, white, stage:Stage IIIA, alive, 651 days 3728.0
TCGA-05-4420-01A 41 years, male, stage:Stage IB, alive, 912 days 3704.6
TCGA-50-5932-01A 75 years, male, white, stage:Stage IIB, dead, 1235 days 3701.0
TCGA-44-8119-01A 73 years, male, white, stage:Stage IIB, alive, 285 days 3676.2
TCGA-05-4384-01A 66 years, male, stage:Stage IIIA, alive, 426 days 3667.3
TCGA-55-6543-01A 60 years, female, white, stage:Stage IA, alive, 435 days 3665.7
TCGA-44-6774-01A 56 years, female, white, stage:Stage IIIA, alive, 658 days 3642.4
TCGA-MP-A4TK-01A 56 years, female, stage:Stage IIB, dead, 582 days 3639.6
TCGA-86-6851-01A 73 years, female, white, stage:Stage IIA, alive, 179 days 3635.3
TCGA-78-8660-01A 69 years, male, stage:Stage IIB, dead, 321 days 3625.0
TCGA-38-6178-01A 70 years, female, white, stage:Stage IIIA, alive, 448 days 3623.3
TCGA-86-7714-01A 61 years, female, black or african american, stage:Stage IIIA, dead, 625 days 3621.7
TCGA-38-4631-01A 72 years, female, white, stage:Stage IB, dead, 354 days 3602.8
TCGA-78-7537-01A 72 years, male, stage:Stage IB, dead, 1622 days 3577.3
TCGA-55-A493-01A 54 years, female, white, stage:Stage IB, alive, 28 days 3576.7
TCGA-91-6849-01A 75 years, female, black or african american, stage:Stage IIIA, alive, 35 days 3551.0
TCGA-MP-A4TF-01A 58 years, female, white, stage:Stage IIA, dead, 336 days 3549.5
TCGA-86-8585-01A 57 years, male, white, stage:Stage IB, alive, 353 days 3533.9
TCGA-73-4659-01A 66 years, male, white, stage:Stage IIIA, dead, 711 days 3530.4
TCGA-71-6725-01A 48 years, female, asian, stage:Stage IB, alive, 256 days 3515.9
TCGA-95-7567-01A 61 years, male, white, stage:Stage IIB, alive, 568 days 3507.5
TCGA-NJ-A55O-01A 56 years, female, white, stage:Stage IIA, alive, 13 days 3494.2
TCGA-55-7728-01A 64 years, female, white, stage:Stage IB, alive, 704 days 3493.4
TCGA-91-A4BC-01A 59 years, male, white, stage:Stage IIA, alive, 44 days 3478.7
TCGA-75-7027-01A male, stage:Stage IB, alive, 3059 days 3451.1
TCGA-38-4632-01A 42 years, male, black or african american, stage:Stage IV, dead, 1357 days 3439.5
TCGA-05-5428-01A 57 years, male, stage:Stage IIA, alive, 670 days 3406.9
TCGA-62-A471-01A 64 years, male, white, stage:Stage IIB, alive, 1246 days 3401.9
TCGA-91-6831-01A 66 years, male, white, stage:Stage IB, alive, 310 days 3399.3
TCGA-NJ-A4YG-01A 65 years, male, white, stage:Stage IB, alive, 2261 days 3378.0
TCGA-50-5930-01A 47 years, male, white, stage:Stage IIIA, dead, 282 days 3361.4
TCGA-55-7914-01A 71 years, female, white, stage:Stage IIA, dead, 187 days 3359.1
TCGA-55-6975-01A 61 years, male, white, stage:Stage IIB, dead, 118 days 3358.3
TCGA-49-AAR9-01A 61 years, male, black or african american, stage:Stage IIB, dead, 260 days 3303.5
TCGA-78-7633-01A 67 years, male, white, stage:Stage IB, dead, 1528 days 3302.7
TCGA-86-8358-01A 44 years, male, white, stage:Stage IB, alive, 653 days 3297.4
TCGA-97-7554-01A 83 years, female, white, stage:Stage IIIA, alive, 775 days 3284.9
TCGA-50-5944-01A 69 years, female, white, stage:Stage IA, alive, 1750 days 3276.9
TCGA-69-8253-01A 59 years, female, black or african american, stage:Stage IIA, alive, 426 days 3273.2
TCGA-91-6836-01A 52 years, female, white, stage:Stage IB, alive, 417 days 3273.0
TCGA-L9-A8F4-01A 64 years, female, black or african american, stage:Stage IB, alive, 476 days 3260.6
TCGA-49-AAQV-01A 63 years, female, black or african american, stage:Stage II, dead, 677 days 3257.2
TCGA-86-6562-01A 52 years, male, white, stage:Stage IIA, dead, 376 days 3255.7
TCGA-05-4249-01A 67 years, male, stage:Stage IB, alive, 1523 days 3243.6
TCGA-78-7220-01A 53 years, female, white, stage:Stage IIIA, dead, 807 days 3223.5
TCGA-50-6673-01A 84 years, female, white, stage:Stage I, dead, 22 days 3203.7
TCGA-55-8506-01A 62 years, female, white, stage:Stage IIB, alive, 11 days 3197.8
TCGA-69-7763-01A 69 years, male, white, stage:Stage IA, alive, 690 days 3144.0
TCGA-50-6593-01A 49 years, female, white, stage:Stage IIIA, dead, 336 days 3142.5
TCGA-86-8668-01A 61 years, female, white, stage:Stage IA, alive, 423 days 3120.8
TCGA-50-5936-01A 58 years, male, white, stage:Stage IIIA, dead, 257 days 3106.4
TCGA-78-7153-01A 65 years, female, white, stage:Stage IB, alive, 3635 days 3102.6
TCGA-97-8179-01A 72 years, male, white, stage:Stage IA, alive, 435 days 3091.3
TCGA-55-8206-01A 56 years, male, white, stage:Stage IA, alive, 888 days 3085.0
TCGA-50-6597-01A 79 years, female, white, stage:Stage IB, dead, 1268 days 3075.0
TCGA-49-AAR0-01A 57 years, male, black or african american, stage:Stage IA, alive, 4765 days 3066.3
TCGA-67-6215-01A 52 years, female, white, stage:Stage IB, alive, 174 days 3037.6
TCGA-49-4487-01A 72 years, female, white, stage:Stage IA, dead, 855 days 3017.8
TCGA-78-7536-01A 69 years, male, white, stage:Stage IIIA, dead, 244 days 3012.1
TCGA-55-8094-01A 51 years, male, white, stage:Stage IV, alive, 541 days 3002.0
TCGA-MP-A4SY-01A 61 years, male, white, stage:Stage IIB, dead, 1501 days 2998.5
TCGA-05-4405-01A 74 years, female, stage:Stage IB, alive, 610 days 2998.1
TCGA-55-A492-01A 70 years, female, white, stage:Stage IA, alive, 596 days 2986.9
TCGA-64-1680-01A 63 years, male, white, stage:Stage IV, alive, 1126 days 2983.4
TCGA-73-4676-01A 45 years, male, white, stage:Stage IIA, dead, 281 days 2959.6
TCGA-49-4490-01A 45 years, female, white, stage:Stage IIIA, dead, 385 days 2928.3
TCGA-44-5643-01A 53 years, male, black or african american, stage:Stage IIIA, alive, 1013 days 2925.0
TCGA-62-A46P-01A 65 years, male, white, stage:Stage IB, dead, 594 days 2924.1
TCGA-69-7764-01A 75 years, male, white, stage:Stage IA, alive, 414 days 2916.0
TCGA-95-7562-01A 71 years, male, black or african american, stage:Stage IIA, dead, 87 days 2901.7
TCGA-86-8669-01A 64 years, male, white, stage:Stage IA, alive, 938 days 2893.3
TCGA-35-3615-01A 57 years, male, white, stage:Stage IB, alive, 14 days 2880.8
TCGA-55-8620-01A 60 years, male, white, stage:Stage IV, dead, 375 days 2872.5
TCGA-55-6642-01A 63 years, male, white, stage:Stage IB, alive, 2449 days 2871.9
TCGA-44-6148-01A 60 years, male, white, stage:Stage IA, alive, 704 days 2869.0
TCGA-93-7348-01A 75 years, female, white, stage:Stage IA, alive, 531 days 2861.3
TCGA-62-A46V-01A 78 years, female, white, stage:Stage IB, alive, 2199 days 2860.4
TCGA-99-8032-01A 61 years, male, white, stage:Stage IA, alive, 44 days 2859.6
TCGA-73-7498-01A 58 years, female, white, stage:Stage IA, alive, 1189 days 2854.5
TCGA-78-7156-01A 62 years, male, white, stage:Stage IV, dead, 976 days 2851.6
TCGA-55-8207-01A 73 years, male, white, stage:Stage IB, alive, 977 days 2848.6
TCGA-62-A470-01A 84 years, male, white, stage:Stage IB, dead, 1194 days 2827.4
TCGA-64-1677-01A 77 years, female, white, stage:Stage IIIA, dead, 628 days 2823.5
TCGA-67-6216-01A 57 years, female, white, stage:Stage IA, alive, 141 days 2783.4
TCGA-99-8025-01A 72 years, female, black or african american, stage:Stage IIIA, alive, 1060 days 2765.8
TCGA-44-8117-01A 54 years, female, white, stage:Stage IB, alive, 385 days 2737.5
TCGA-50-5942-01A 67 years, female, white, stage:Stage IA, alive, 1847 days 2732.5
TCGA-55-A491-01A 81 years, female, white, stage:Stage IA, alive, 626 days 2708.3
TCGA-55-8512-01A 41 years, male, white, stage:Stage IV, dead, 607 days 2699.3
TCGA-49-AARO-01A 39 years, female, black or african american, stage:Stage IA, alive, 3759 days 2690.1
TCGA-50-8460-01A 74 years, male, white, stage:Stage IA, alive, 829 days 2683.1
TCGA-55-8505-01A 62 years, male, white, stage:Stage IIIA, alive, 440 days 2681.0
TCGA-J2-8194-01A 69 years, female, white, stage:Stage IIB, alive, 724 days 2669.2
TCGA-95-A4VP-01A 66 years, female, white, stage:Stage IIIA, alive, 605 days 2662.8
TCGA-49-6767-01A 46 years, female, white, stage:Stage IIB, alive, 677 days 2653.1
TCGA-49-4507-01A 73 years, female, white, stage:Stage IIIA, dead, 268 days 2651.9
TCGA-44-7670-01A 47 years, female, white, stage:Stage IIA, alive, 882 days 2643.4
TCGA-J2-A4AD-01A 61 years, female, white, stage:Stage IA, dead, 550 days 2636.4
TCGA-MP-A4T7-01A 75 years, female, stage:Stage IV, dead, 167 days 2634.8
TCGA-38-4628-01A 65 years, female, white, stage:Stage IIB, dead, 1492 days 2620.9
TCGA-55-8614-01A 76 years, male, white, stage:Stage IB, alive, 536 days 2611.4
TCGA-78-7159-01A 60 years, female, white, stage:Stage IA, alive, 1974 days 2606.0
TCGA-78-7161-01A 69 years, female, white, stage:Stage IIB, dead, 291 days 2524.3
TCGA-55-A48Y-01A 69 years, male, white, stage:Stage IIA, alive, 630 days 2521.2
TCGA-55-7576-01A 54 years, male, black or african american, stage:Stage IB, alive, 670 days 2505.0
TCGA-4B-A93V-01A 52 years, female, black or african american, stage:Stage IA, dead, 300 days 2492.7
TCGA-78-7146-01A 71 years, female, white, stage:Stage IIIA, dead, 173 days 2466.7
TCGA-64-5779-01A 61 years, male, white, stage:Stage IIIA, alive, 864 days 2442.0
TCGA-44-A4SU-01A 67 years, female, white, stage:Stage IA, dead, 409 days 2418.6
TCGA-49-6761-01A 68 years, female, white, stage:Stage IIIA, alive, 354 days 2414.9
TCGA-49-AAR2-01A 64 years, male, black or african american, stage:Stage IB, alive, 2224 days 2379.1
TCGA-55-8514-01A 70 years, female, black or african american, stage:Stage IB, alive, 520 days 2375.8
TCGA-NJ-A4YI-01A 87 years, female, white, stage:Stage IIIA, dead, 4 days 2355.4
TCGA-55-8511-01A 73 years, female, white, stage:Stage IB, alive, 552 days 2337.4
TCGA-97-7937-01A 65 years, male, white, stage:Stage IB, alive, 564 days 2328.2
TCGA-62-8395-01A 80 years, female, white, stage:Stage IIB, alive, 1216 days 2324.7
TCGA-73-4668-01A 66 years, female, american indian or alaska native, stage:Stage IIB, alive, 467 days 2321.7
TCGA-86-8279-01A 46 years, male, white, stage:Stage IIA, alive, 949 days 2306.3
TCGA-55-A48X-01A 63 years, female, white, stage:Stage IIA, alive, 689 days 2300.3
TCGA-55-6986-01A 74 years, female, white, stage:Stage IB, alive, 3261 days 2298.5
TCGA-78-8640-01A 59 years, male, stage:Stage IIA, alive, 7062 days 2295.4
TCGA-69-7973-01A 42 years, female, white, stage:Stage IB, alive, 230 days 2270.4
TCGA-62-8397-01A 70 years, female, white, stage:Stage IIB, alive, 1289 days 2268.6
TCGA-73-4670-01A 69 years, female, white, stage:Stage IV, alive, 131 days 2257.5
TCGA-86-8673-01A 61 years, male, white, stage:Stage IB, alive, 862 days 2242.1
TCGA-55-8097-01A 60 years, female, white, stage:Stage IA, alive, 476 days 2232.9
TCGA-MP-A5C7-01A 76 years, female, white, stage:Stage IB, alive, 2248 days 2219.8
TCGA-55-A4DG-01A 71 years, male, white, stage:Stage IA, alive, 608 days 2219.7
TCGA-44-6776-01A 60 years, female, white, stage:Stage IA, alive, 2616 days 2210.9
TCGA-50-5946-01A 62 years, male, white, stage:Stage IA, alive, 1617 days 2161.2
TCGA-49-4486-01A 72 years, male, white, stage:Stage IA, dead, 2318 days 2160.5
TCGA-55-7570-01A 60 years, male, black or african american, stage:Stage IA, alive, 824 days 2155.3
TCGA-95-7039-01A 54 years, female, white, stage:Stage IIB, alive, 1272 days 2134.0
TCGA-55-8508-01A 60 years, female, black or african american, stage:Stage IIA, alive, 617 days 2131.8
TCGA-44-7671-01A 64 years, male, black or african american, stage:Stage IB, alive, 889 days 2124.1
TCGA-55-8507-01A 53 years, male, white, stage:Stage IA, alive, 418 days 2106.9
TCGA-50-5051-01A 42 years, female, white, stage:Stage IIIA, dead, 478 days 2050.3
TCGA-86-8359-01A 52 years, male, white, stage:Stage IIIA, dead, 444 days 2031.6
TCGA-53-A4EZ-01A 63 years, male, white, stage:Stage IIA, alive, 1071 days 2031.1
TCGA-50-5931-01A 75 years, female, white, stage:Stage IB, dead, 434 days 2028.5
TCGA-97-A4M3-01A 69 years, female, white, stage:Stage IA, alive, 540 days 2026.3
TCGA-73-4675-01A 59 years, male, white, stage:Stage IIIA, dead, 922 days 2023.5
TCGA-53-7813-01A 51 years, female, white, stage:Stage IIIB, alive, 424 days 1996.3
TCGA-55-8203-01A 69 years, female, white, stage:Stage IA, alive, 547 days 1995.4
TCGA-62-8399-01A 62 years, male, white, stage:Stage IIIA, alive, 2696 days 1969.6
TCGA-49-4512-01A 69 years, female, white, stage:Stage IIIA, dead, 905 days 1964.2
TCGA-55-6981-01A 53 years, female, white, stage:Stage IIIA, dead, 1379 days 1950.1
TCGA-49-AARE-01A 51 years, female, black or african american, stage:Stage IA, dead, 1229 days 1941.0
TCGA-NJ-A55R-01A 67 years, male, white, stage:Stage IA, alive, 603 days 1932.6
TCGA-78-7158-01A 59 years, female, white, stage:Stage IIIB, dead, 179 days 1931.2
TCGA-55-8087-01A 59 years, female, white, stage:Stage IB, alive, 462 days 1929.9
TCGA-MP-A4TD-01A 71 years, male, white, stage:Stage IIIA, dead, 307 days 1921.6
TCGA-78-7145-01A 52 years, female, white, stage:Stage IV, dead, 826 days 1914.9
TCGA-78-7167-01A 77 years, male, white, stage:Stage IV, dead, 2681 days 1911.9
TCGA-38-4630-01A 75 years, female, white, stage:Stage IB, dead, 1073 days 1889.0
TCGA-78-7149-01A 71 years, male, white, stage:Stage IIIB, alive, 3940 days 1883.6
TCGA-L4-A4E5-01A 48 years, female, white, stage:Stage I, alive, 578 days 1879.2
TCGA-05-4415-01A 57 years, male, stage:Stage IIIB, dead, 91 days 1861.9
TCGA-44-7660-01A 72 years, male, white, stage:Stage IB, alive, 592 days 1861.2
TCGA-44-5644-01A 51 years, female, white, stage:Stage IB, alive, 863 days 1858.8
TCGA-44-8120-01A 58 years, male, black or african american, stage:Stage IB, alive, 260 days 1804.8
TCGA-86-8054-01A 61 years, male, white, stage:Stage IIB, alive, 1148 days 1766.0
TCGA-05-4390-01A 58 years, female, stage:Stage IB, alive, 1126 days 1762.4
TCGA-55-8616-01A 58 years, female, white, stage:Stage IB, alive, 48 days 1758.3
TCGA-86-8674-01A 50 years, male, white, stage:Stage IIA, alive, 806 days 1699.1
TCGA-86-A4D0-01A 48 years, male, white, stage:Stage IIA, dead, 116 days 1690.4
TCGA-93-8067-01A 77 years, male, asian, stage:Stage IB, alive, 186 days 1686.8
TCGA-MP-A4T8-01A 68 years, male, stage:Stage IIIA, dead, 161 days 1669.0
TCGA-64-1678-01A 70 years, female, white, stage:'--, alive, 1189 days 1655.9
TCGA-95-7043-01A 63 years, female, white, stage:Stage IA, dead, 503 days 1647.1
TCGA-NJ-A7XG-01A 49 years, male, black or african american, stage:Stage IIIA, alive, 617 days 1642.0
TCGA-97-8171-01A 81 years, male, asian, stage:Stage IV, alive, 568 days 1571.4
TCGA-69-7979-01A 71 years, female, white, stage:Stage IB, alive, 408 days 1524.6
TCGA-64-5774-01A 60 years, male, white, stage:Stage IB, alive, 2676 days 1517.0
TCGA-86-7713-01A 70 years, male, white, stage:Stage IIA, alive, 1157 days 1507.7
TCGA-78-7166-01A 84 years, male, white, stage:Stage IIB, dead, 258 days 1464.9
TCGA-78-7155-01A 68 years, male, white, stage:Stage IB, dead, 1171 days 1459.7
TCGA-86-7955-01A 62 years, male, white, stage:Stage IB, alive, 1072 days 1450.4
TCGA-91-6847-01A 62 years, female, white, stage:Stage IB, alive, 842 days 1409.8
TCGA-55-8615-01A 67 years, male, white, stage:Stage IIIA, alive, 446 days 1347.5
TCGA-44-7667-01A 49 years, female, white, stage:Stage IIB, alive, 1097 days 1338.3
TCGA-50-6591-01A 63 years, female, white, stage:Stage IV, dead, 119 days 1326.4
TCGA-49-4514-01A 79 years, female, white, stage:Stage IA, alive, 1700 days 1324.5
TCGA-NJ-A4YF-01A 50 years, female, black or african american, stage:Stage IA, alive, 2161 days 1238.1
TCGA-97-8176-01A 63 years, male, white, stage:Stage IIIA, dead, 468 days 1214.9
TCGA-69-7760-01A 73 years, male, white, stage:Stage IIB, alive, 202 days 1209.3
TCGA-MP-A4TE-01A 56 years, male, white, stage:Stage IIA, dead, 896 days 1145.2
TCGA-55-A494-01A 61 years, female, white, stage:Stage IB, alive, 481 days 1131.2
TCGA-MN-A4N1-01A 60 years, male, black or african american, stage:Stage IIA, alive, 827 days 1123.5
TCGA-78-7535-01A 45 years, male, white, stage:Stage IB, dead, 949 days 1083.7
TCGA-78-8662-01A 53 years, female, stage:Stage IB, dead, 3361 days 893.4
TCGA-55-7910-01A 50 years, female, black or african american, stage:Stage IIA, alive, 1040 days 867.3
TCGA-55-6972-01A 72 years, male, white, stage:Stage IB, dead, 1632 days 830.4
TCGA-L9-A7SV-01A 69 years, male, black or african american, stage:Stage IIA, alive, 565 days 765.5
TCGA-55-A490-01A 78 years, male, white, stage:Stage IIA, dead, 99 days 660.5
TCGA-49-AARQ-01A 41 years, female, black or african american, stage:Stage I, alive, 6732 days 320.8
Show allShow less
LUNG ADENOCARCINOMA (VALIDATION) - Interactive survival scatter ploti

The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.

The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".

Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.

Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.

& Survival analysisi

Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.

B2M is not prognostic in Lung Adenocarcinoma (validation)


Stage:

Survival analysis
Current cut offi

Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.

:
Best expression cut offi

Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .

When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.

: 11193.5
Median expressioni

Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.

: N/A
Median follow up timei

Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.

: N/A
P scorei

Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.

N/A
5-year survival highi

5-year survival for patients with higher expression than the expression cutoff.

For melanoma and glioma, 3-year survival is shown.

N/A
5-year survival lowi

5-year survival for patients with lower expression than the expression cutoff.

For melanoma and glioma, 3-year survival is shown.

N/A
TCGA RNA samplesi

RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.

Average pTPM 8379.8
Number of samples 105
Samples
Sample Description pTPM
L766 59 years, male, stage:Stage IB, alive, 1793 days 17501.4
L828 68 years, female, stage:Stage IIB, alive, 2222 days 16752.8
L626 76 years, female, stage:Stage IA, dead, 1994 days 16394.1
L462 67 years, male, stage:Stage IIIA, dead, 568 days 14906.5
L875 69 years, female, stage:Stage IA, alive, 1675 days 14533.1
L802 62 years, female, stage:Stage IA, dead, 773 days 14296.8
L778 65 years, female, stage:Stage IA, alive, 1600 days 14171.7
L504 65 years, female, stage:Stage IA, dead, 1295 days 13746.7
L557 81 years, female, stage:Stage IB, alive, 2580 days 13689.2
L455 52 years, female, stage:Stage IA, alive, 3315 days 13495.5
L603 70 years, female, stage:Stage IB, dead, 972 days 13334.7
L446 71 years, female, stage:Stage IIB, dead, 415 days 13156.1
L887 77 years, male, stage:Stage IA, dead, 374 days 13024.7
L865 75 years, female, stage:Stage IIB, alive, 1927 days 12607.7
L620 70 years, female, stage:Stage IIIA, dead, 338 days 12204.1
L808 48 years, female, stage:Stage IA, alive, 3001 days 12148.4
L877 70 years, female, stage:Stage IA, alive, 1599 days 12078.9
L885 62 years, female, stage:Stage IA, alive, 1618 days 12075.9
L569 76 years, female, stage:Stage IA, alive, 2531 days 11881.9
L602 69 years, female, stage:Stage IA, alive, 2277 days 11879.1
L484 64 years, female, stage:Stage IA, alive, 2895 days 11651.5
L827 70 years, male, stage:Stage IIB, dead, 1105 days 11339.3
L404 74 years, female, stage:Stage IIA, dead, 2318 days 11217.9
L872 71 years, female, stage:Stage IA, alive, 1793 days 11193.5
L851 70 years, male, stage:Stage IB, dead, 1315 days 11154.8
L662 66 years, male, stage:Stage IA, dead, 865 days 10359.0
L440 80 years, male, stage:Stage IIB, dead, 651 days 10304.8
L458 76 years, female, stage:Stage IA, dead, 223 days 10296.9
L682 64 years, female, stage:Stage IIB, dead, 840 days 10233.5
L543 65 years, male, stage:Stage IA, alive, 2711 days 10087.9
L400 78 years, male, stage:Stage IIA, dead, 1233 days 10075.1
L816 73 years, female, stage:Stage IIA, dead, 353 days 9945.6
L605 74 years, female, stage:Stage IA, alive, 2460 days 9839.6
L630 65 years, female, stage:Stage IA, dead, 1733 days 9802.7
L621 79 years, female, stage:Stage IIIA, dead, 1487 days 9723.7
L768 60 years, male, stage:Stage IIIA, dead, 472 days 9656.1
L413 72 years, female, stage:Stage IIIA, dead, 313 days 9514.1
L752 65 years, male, stage:Stage IIIA, alive, 1647 days 9313.5
L473 66 years, female, stage:Stage IA, alive, 3021 days 9083.7
L735 75 years, female, stage:Stage IA, alive, 1830 days 9014.1
L880 75 years, female, stage:Stage IA, alive, 1767 days 9001.5
L530 76 years, female, stage:Stage IIA, dead, 308 days 8973.6
L656 58 years, male, stage:Stage IA, alive, 2227 days 8806.3
L874 56 years, female, stage:Stage IIIA, alive, 1733 days 8569.6
L800 66 years, female, stage:Stage IA, dead, 2417 days 8546.8
L791 66 years, female, stage:Stage IIIA, dead, 368 days 8377.6
L585 70 years, female, stage:Stage IIA, dead, 402 days 8311.1
L596 74 years, female, stage:Stage IA, alive, 2319 days 8172.4
L551 62 years, male, stage:Stage IA, alive, 2924 days 8033.0
L673 74 years, female, stage:Stage IA, dead, 568 days 7982.4
L546 57 years, male, stage:Stage IA, dead, 973 days 7898.5
L749 49 years, female, stage:Stage IIIA, dead, 189 days 7878.5
L493 56 years, female, stage:Stage IIB, alive, 2945 days 7701.1
L678 65 years, female, stage:Stage IB, dead, 1114 days 7601.9
L607 59 years, male, stage:Stage IB, alive, 2572 days 7593.6
L617 68 years, male, stage:Stage IIIA, dead, 238 days 7563.8
L810 64 years, female, stage:Stage IIIA, dead, 625 days 7457.0
L663 62 years, female, stage:Stage IB, alive, 2018 days 7445.3
L689 69 years, male, stage:Stage IA, alive, 1943 days 7253.2
L850 77 years, male, stage:Stage IIIA, dead, 997 days 7062.1
L601 75 years, male, stage:Stage IB, dead, 2068 days 6926.9
L879 75 years, male, stage:Stage IV, dead, 873 days 6852.1
L782 73 years, female, stage:Stage IIB, alive, 3371 days 6771.5
L619 68 years, female, stage:Stage IIIA, dead, 1905 days 6762.2
L703 71 years, male, stage:Stage IIA, dead, 1137 days 6753.3
L531 74 years, male, stage:Stage IB, dead, 928 days 6721.8
L829 76 years, male, stage:Stage IA, alive, 2173 days 6717.2
L566 58 years, male, stage:Stage IB, alive, 2489 days 6676.0
L731 59 years, female, stage:Stage IA, dead, 964 days 6577.8
L832 65 years, female, stage:Stage IA, alive, 2145 days 6494.1
L890 56 years, female, stage:Stage IIB, dead, 1264 days 6493.5
L842 62 years, female, stage:Stage IB, alive, 2005 days 6343.9
L593 78 years, male, stage:Stage IA, dead, 2436 days 6224.4
L871 74 years, male, stage:Stage IB, dead, 873 days 6200.0
L545 60 years, female, stage:Stage IA, alive, 2874 days 6185.6
L738 74 years, female, stage:Stage IB, dead, 1314 days 6184.0
L867 62 years, female, stage:Stage IIIA, dead, 317 days 6150.6
L561 62 years, female, stage:Stage IA, alive, 2543 days 6012.9
L606 55 years, male, stage:Stage IA, alive, 2336 days 5917.0
L688 57 years, male, stage:Stage IIIA, dead, 789 days 5915.9
L401 74 years, male, stage:Stage IIIA, dead, 1888 days 5871.7
L838 71 years, female, stage:Stage IA, dead, 1005 days 5847.2
L773 64 years, female, stage:Stage IV, dead, 311 days 5819.7
L710 72 years, female, stage:Stage IIA, alive, 1775 days 5731.7
L695 68 years, female, stage:Stage IB, dead, 1762 days 5625.2
L725 64 years, female, stage:Stage IA, alive, 1830 days 5458.5
L541 70 years, female, stage:Stage IIIA, dead, 915 days 5419.5
L567 83 years, female, stage:Stage IIIA, dead, 1299 days 5400.7
L616 54 years, male, stage:Stage IA, dead, 410 days 5038.6
L439 80 years, male, stage:Stage IIB, dead, 2773 days 4960.3
L683 77 years, female, stage:Stage IIA, dead, 612 days 4948.4
L746 64 years, female, stage:Stage IIIA, dead, 594 days 4715.6
L565 59 years, female, stage:Stage IB, dead, 543 days 4630.2
L873 62 years, female, stage:Stage IA, alive, 1740 days 4420.3
L764 66 years, male, stage:Stage IIIA, alive, 1684 days 4392.0
L831 62 years, female, stage:Stage IB, alive, 2152 days 4252.5
L826 45 years, female, stage:Stage IV, dead, 935 days 4168.1
L613 72 years, male, stage:Stage IIIA, dead, 19 days 4017.5
L612 80 years, female, stage:Stage IIIA, alive, 2410 days 3765.8
L511 56 years, female, stage:Stage IIIA, alive, 2942 days 3690.3
L638 65 years, male, stage:Stage IA, alive, 2076 days 3582.3
L599 80 years, male, stage:Stage IB, dead, 2083 days 3365.0
L728 77 years, male, stage:Stage IIB, dead, 1128 days 3276.0
L814 73 years, male, stage:Stage IIIA, alive, 2466 days 2351.7
L532 69 years, female, stage:Stage IA, dead, 301 days 2336.4
Show allShow less
LUNG SQUAMOUS CELL CARCINOMA (TCGA) - Interactive survival scatter ploti

The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.

The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".

Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.

Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.

& Survival analysisi

Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.

B2M is not prognostic in Lung Squamous Cell Carcinoma (TCGA)


Stage:


Survival analysis
Current cut offi

Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.

:
Best expression cut offi

Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .

When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.

: 3820.01
Median expressioni

Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.

: N/A
Median follow up timei

Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.

: N/A
P scorei

Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.

N/A
5-year survival highi

5-year survival for patients with higher expression than the expression cutoff.

For melanoma and glioma, 3-year survival is shown.

N/A
5-year survival lowi

5-year survival for patients with lower expression than the expression cutoff.

For melanoma and glioma, 3-year survival is shown.

N/A
TCGA RNA samplesi

RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.

Average pTPM 3743.6
Number of samples 489
Samples
Sample Description pTPM
TCGA-37-3792-01A 69 years, male, white, stage:Stage IB, alive, 12 days 16768.8
TCGA-85-7950-01A 46 years, male, white, stage:Stage IB, alive, 576 days 13237.5
TCGA-66-2785-01A 65 years, male, stage:Stage IB, alive, 60 days 12442.6
TCGA-43-A475-01A 67 years, female, white, stage:Stage IIB, alive, 296 days 11904.1
TCGA-33-4589-01A 62 years, female, white, stage:Stage IIB, dead, 47 days 11317.5
TCGA-22-0940-01A 71 years, male, white, stage:Stage IIA, dead, 669 days 11299.7
TCGA-NC-A5HJ-01A 59 years, male, white, stage:Stage IIB, dead, 418 days 11272.7
TCGA-66-2768-01A 57 years, male, stage:Stage IIB, alive, 61 days 11034.4
TCGA-34-5241-01A 79 years, male, white, stage:Stage IB, dead, 515 days 11012.8
TCGA-37-A5EL-01A 53 years, male, white, stage:Stage IIB, dead, 1143 days 10651.1
TCGA-56-8623-01A 71 years, male, white, stage:Stage IB, dead, 692 days 10464.2
TCGA-90-A59Q-01A 61 years, female, white, stage:Stage IIA, dead, 322 days 10109.2
TCGA-77-7335-01A 62 years, female, white, stage:Stage IIIB, dead, 2133 days 9721.2
TCGA-85-7710-01A 59 years, female, white, stage:Stage IA, alive, 42 days 9705.1
TCGA-85-8481-01A 70 years, male, white, stage:Stage IIB, dead, 236 days 9514.1
TCGA-34-5234-01A 71 years, female, white, stage:Stage IA, alive, 2271 days 9106.4
TCGA-18-3415-01A 77 years, male, stage:Stage IB, dead, 2803 days 9032.5
TCGA-21-1076-01A 54 years, female, white, stage:Stage IB, alive, 1852 days 8959.3
TCGA-63-A5MM-01A 69 years, female, stage:Stage IIB, dead, 456 days 8943.5
TCGA-85-8048-01A 62 years, male, white, stage:Stage IA, alive, 765 days 8693.3
TCGA-NC-A5HE-01A 60 years, male, white, stage:Stage IIB, alive, 2336 days 8612.7
TCGA-18-3410-01A 81 years, male, stage:Stage IIB, dead, 146 days 8603.1
TCGA-33-4566-01A 40 years, male, white, stage:Stage IB, dead, 5287 days 8561.9
TCGA-63-A5MN-01A 78 years, female, stage:Stage IIB, dead, 345 days 8401.9
TCGA-22-5474-01A 74 years, male, white, stage:Stage IB, dead, 445 days 8275.7
TCGA-56-8503-01A 76 years, female, white, stage:Stage IIB, alive, 41 days 8255.8
TCGA-37-3783-01A 51 years, male, white, stage:Stage IIIA, alive, 122 days 8166.9
TCGA-39-5022-01A 76 years, male, white, stage:Stage IB, dead, 1679 days 8154.6
TCGA-60-2725-01A 74 years, male, white, stage:Stage IB, alive, 816 days 7995.2
TCGA-66-2786-01A 68 years, female, stage:Stage IA, alive, 790 days 7813.5
TCGA-21-1083-01A 75 years, male, white, stage:Stage IA, dead, 1315 days 7485.4
TCGA-66-2771-01A 60 years, male, stage:Stage IIB, alive, 578 days 7453.9
TCGA-43-3920-01A 71 years, male, white, stage:Stage IB, alive, 1007 days 7270.8
TCGA-18-3416-01A 83 years, male, stage:Stage IIB, dead, 973 days 7170.2
TCGA-39-5016-01A 44 years, male, white, stage:Stage IIA, alive, 3850 days 7166.4
TCGA-63-7020-01A male, stage:Stage IA, alive, 2133 days 7159.2
TCGA-37-4132-01A 61 years, female, white, stage:Stage IV, alive, 227 days 7140.0
TCGA-37-3789-01A 65 years, male, white, stage:Stage IB, alive, 13 days 7040.4
TCGA-39-5024-01A 65 years, female, white, stage:Stage IIIA, alive, 2510 days 7035.5
TCGA-77-8131-01A 72 years, male, stage:Stage IB, dead, 383 days 7032.9
TCGA-56-8309-01A 66 years, male, white, stage:Stage IA, alive, 428 days 7016.1
TCGA-77-A5GH-01A 81 years, male, stage:Stage IB, alive, 1182 days 6910.2
TCGA-60-2721-01A 73 years, male, white, stage:Stage IB, alive, 983 days 6887.2
TCGA-77-A5FZ-01A 64 years, male, stage:Stage IIIB, dead, 3838 days 6823.1
TCGA-56-8625-01A 66 years, female, white, stage:Stage IIIA, dead, 315 days 6755.3
TCGA-18-3406-01A 67 years, male, white, stage:Stage IA, dead, 371 days 6707.0
TCGA-43-8115-01A 72 years, female, white, stage:Stage IIA, alive, 407 days 6687.3
TCGA-66-2744-01A 71 years, male, stage:Stage IIB, alive, 30 days 6598.9
TCGA-39-5035-01A 72 years, female, white, stage:Stage IA, alive, 2080 days 6585.5
TCGA-98-A53B-01A 69 years, male, white, stage:Stage IB, dead, 61 days 6544.0
TCGA-58-A46M-01A 61 years, male, white, stage:Stage IIB, alive, 1072 days 6525.1
TCGA-18-3414-01A 73 years, male, asian, stage:Stage IV, dead, 716 days 6523.3
TCGA-56-8201-01A 74 years, male, white, stage:Stage IIB, dead, 397 days 6356.6
TCGA-46-3769-01A 57 years, male, white, stage:'--, alive, 135 days 6326.0
TCGA-77-7465-01A 58 years, male, white, stage:Stage IIA, alive, 990 days 6309.5
TCGA-NK-A5CX-01A 73 years, male, white, stage:Stage IIA, alive, 111 days 6302.1
TCGA-18-4721-01A 74 years, male, white, stage:Stage IA, alive, 4694 days 6298.8
TCGA-66-2788-01A 56 years, male, stage:Stage IB, alive, 699 days 6282.5
TCGA-46-3766-01A 62 years, female, white, stage:Stage IA, alive, 370 days 6281.8
TCGA-96-A4JL-01A 78 years, female, asian, stage:Stage IIA, alive, 842 days 6274.9
TCGA-98-7454-01A 73 years, male, white, stage:Stage IB, alive, 652 days 6272.5
TCGA-98-8020-01A 56 years, female, black or african american, stage:Stage IIIA, dead, 84 days 6221.4
TCGA-66-2789-01A 73 years, male, stage:Stage IIIB, dead, 123 days 6087.0
TCGA-98-8022-01A 61 years, male, white, stage:Stage IA, dead, 933 days 6083.9
TCGA-66-2770-01A 79 years, male, stage:Stage IB, alive, 700 days 6056.1
TCGA-NC-A5HL-01A 73 years, male, white, stage:Stage IIA, dead, 88 days 6030.1
TCGA-85-8355-01A 63 years, male, white, stage:Stage IA, alive, 61 days 6013.7
TCGA-77-8136-01A 74 years, female, stage:Stage IIB, dead, 1189 days 6010.9
TCGA-94-A4VJ-01A 71 years, female, white, stage:Stage IA, alive, 430 days 5971.1
TCGA-63-A5MP-01A 56 years, male, stage:Stage IIB, alive, 769 days 5962.9
TCGA-22-5492-01A 73 years, female, stage:Stage IIIA, dead, 506 days 5962.1
TCGA-52-7622-01A 62 years, female, white, stage:Stage IA, alive, 862 days 5941.3
TCGA-34-5239-01A 75 years, male, white, stage:Stage IIIA, alive, 1834 days 5938.7
TCGA-33-4583-01A 73 years, male, white, stage:Stage IA, dead, 4601 days 5898.3
TCGA-66-2767-01A 62 years, male, stage:Stage IIIB, alive, 61 days 5895.2
TCGA-60-2709-01A 69 years, male, black or african american, stage:Stage IB, alive, 1505 days 5882.0
TCGA-98-A53C-01A 77 years, female, white, stage:Stage IA, alive, 822 days 5878.9
TCGA-66-2794-01A 64 years, male, stage:Stage IIIB, alive, 1645 days 5834.6
TCGA-60-2715-01A 51 years, male, white, stage:Stage IA, dead, 1075 days 5819.0
TCGA-90-7767-01A 56 years, male, white, stage:Stage IIB, alive, 89 days 5811.8
TCGA-63-A5MT-01A 74 years, male, stage:Stage IIB, alive, 498 days 5809.9
TCGA-22-1000-01A 76 years, male, white, stage:Stage IB, dead, 454 days 5724.6
TCGA-21-1070-01A 60 years, female, black or african american, stage:Stage IIIA, alive, 3636 days 5661.1
TCGA-NK-A5CT-01A 70 years, male, white, stage:Stage IA, alive, 1997 days 5621.5
TCGA-46-3767-01A 76 years, male, white, stage:Stage IA, alive, 396 days 5615.0
TCGA-18-3409-01A 74 years, male, white, stage:Stage IA, alive, 3747 days 5607.9
TCGA-98-8023-01A 70 years, male, white, stage:Stage IIIA, alive, 649 days 5588.8
TCGA-58-A46K-01A 59 years, male, white, stage:Stage IIIA, dead, 1045 days 5544.2
TCGA-98-A53H-01A 76 years, female, white, stage:Stage IA, alive, 618 days 5543.5
TCGA-77-8007-01A 68 years, male, stage:Stage IIB, dead, 198 days 5537.4
TCGA-92-8064-01A 58 years, male, white, stage:'--, alive, 160 days 5472.7
TCGA-77-6842-01A 79 years, male, white, stage:Stage IIB, dead, 899 days 5467.3
TCGA-37-4141-01A 65 years, female, white, stage:Stage IA, alive, 12 days 5466.3
TCGA-85-A511-01A 62 years, male, white, stage:Stage IIB, dead, 455 days 5439.6
TCGA-60-2698-01A 62 years, male, white, stage:Stage IIB, dead, 311 days 5388.4
TCGA-NC-A5HM-01A 76 years, male, white, stage:Stage IB, alive, 1212 days 5384.4
TCGA-66-2780-01A 65 years, male, stage:Stage IB, dead, 366 days 5377.6
TCGA-22-4609-01A 81 years, male, white, stage:Stage IA, dead, 291 days 5363.3
TCGA-85-6175-01A 63 years, female, white, stage:Stage IIB, dead, 294 days 5320.4
TCGA-21-1079-01A 71 years, male, white, stage:Stage IIIA, dead, 965 days 5307.8
TCGA-66-2791-01A 66 years, male, stage:Stage IIIB, dead, 153 days 5281.9
TCGA-43-5668-01A 78 years, male, white, stage:Stage IIA, dead, 559 days 5257.3
TCGA-56-A4ZJ-01A 75 years, female, white, stage:Stage IA, alive, 640 days 5247.5
TCGA-60-2713-01A 64 years, male, white, stage:Stage IB, alive, 1731 days 5237.8
TCGA-22-5489-01A 64 years, male, white, stage:Stage IA, dead, 1912 days 5205.6
TCGA-37-A5EM-01A 49 years, male, white, stage:Stage II, alive, 867 days 5203.2
TCGA-85-8350-01A 61 years, male, white, stage:Stage IA, alive, 683 days 5151.5
TCGA-O2-A52Q-01A 44 years, female, white, stage:Stage III, dead, 113 days 5146.1
TCGA-70-6722-01A 47 years, male, asian, stage:Stage IIIA, alive, 367 days 5143.6
TCGA-66-2755-01A 63 years, male, stage:Stage IB, alive, 28 days 5130.2
TCGA-90-A4EE-01A 53 years, male, white, stage:Stage IIA, alive, 688 days 5125.4
TCGA-66-2773-01A 69 years, male, stage:Stage IB, dead, 92 days 5090.3
TCGA-52-7811-01A 67 years, male, white, stage:Stage IB, dead, 266 days 5083.8
TCGA-22-4604-01A 73 years, male, white, stage:Stage IIA, dead, 399 days 5052.1
TCGA-22-1016-01A 65 years, male, white, stage:Stage IB, dead, 822 days 5036.7
TCGA-85-A4PA-01A 61 years, male, white, stage:Stage IB, alive, 741 days 5036.4
TCGA-60-2704-01A 73 years, male, white, stage:Stage IIB, dead, 1154 days 5012.9
TCGA-60-2697-01A 41 years, male, white, stage:Stage IIA, dead, 372 days 5008.1
TCGA-60-2723-01A 74 years, female, white, stage:Stage IB, alive, 1092 days 5000.3
TCGA-56-A4BY-01A 66 years, male, white, stage:Stage IB, dead, 543 days 4987.0
TCGA-34-5232-01A 75 years, female, black or african american, stage:Stage IIA, alive, 2471 days 4938.4
TCGA-21-1071-01A 67 years, male, white, stage:Stage IB, dead, 1426 days 4909.5
TCGA-66-2765-01A 64 years, male, stage:Stage IB, alive, 61 days 4876.7
TCGA-18-3408-01A 77 years, female, white, stage:Stage IB, dead, 2304 days 4859.3
TCGA-98-A53D-01A 68 years, male, white, stage:Stage IIB, dead, 645 days 4855.5
TCGA-22-4596-01A 69 years, female, white, stage:Stage IB, dead, 17 days 4841.0
TCGA-43-7658-01A 75 years, female, white, stage:Stage IA, dead, 2378 days 4836.1
TCGA-21-5784-01A 80 years, female, white, stage:Stage IB, alive, 1268 days 4834.3
TCGA-63-A5MR-01A 70 years, female, stage:Stage IB, alive, 2716 days 4793.8
TCGA-22-5471-01A 75 years, male, white, stage:Stage IB, alive, 1845 days 4784.9
TCGA-56-1622-01A 58 years, male, white, stage:Stage IB, dead, 881 days 4764.4
TCGA-77-7142-01A 59 years, female, white, stage:Stage IB, alive, 2227 days 4764.1
TCGA-68-A59J-01A 74 years, female, white, stage:Stage IB, alive, 448 days 4751.5
TCGA-33-4538-01A 66 years, male, white, stage:Stage IIIA, dead, 2979 days 4748.9
TCGA-34-8454-01A 62 years, female, white, stage:Stage IIIA, alive, 1180 days 4746.2
TCGA-90-7766-01A 66 years, female, white, stage:Stage IA, alive, 289 days 4729.9
TCGA-33-4547-01A 68 years, male, white, stage:Stage IB, alive, 2419 days 4719.5
TCGA-63-A5MS-01A 78 years, male, stage:Stage IB, alive, 2381 days 4710.7
TCGA-66-2769-01A 75 years, male, stage:Stage IIIB, dead, 215 days 4656.7
TCGA-22-1017-01A 62 years, male, white, stage:Stage IA, dead, 1485 days 4575.6
TCGA-85-8277-01A 70 years, male, white, stage:Stage IIIA, dead, 307 days 4566.0
TCGA-85-7699-01A 73 years, male, white, stage:Stage IIIA, dead, 1001 days 4557.3
TCGA-58-8388-01A 60 years, male, white, stage:Stage IB, dead, 412 days 4556.3
TCGA-22-4599-01A 73 years, female, white, stage:Stage IB, dead, 1161 days 4509.0
TCGA-39-5030-01A 81 years, female, asian, stage:Stage IIIA, dead, 59 days 4479.4
TCGA-NK-A7XE-01A 66 years, male, black or african american, stage:Stage IIIB, alive, 13 days 4471.3
TCGA-63-6202-01A male, stage:Stage IIA, alive, 1602 days 4443.6
TCGA-68-8251-01A 78 years, male, white, stage:Stage IB, alive, 406 days 4433.2
TCGA-58-8393-01A 68 years, female, white, stage:Stage IB, alive, 1058 days 4422.3
TCGA-70-6723-01A 65 years, male, asian, stage:Stage IIA, alive, 375 days 4413.1
TCGA-77-8156-01A 60 years, male, stage:Stage IB, alive, 1106 days 4408.5
TCGA-85-7698-01A 48 years, male, white, stage:Stage IA, alive, 952 days 4399.5
TCGA-77-8008-01A 68 years, male, stage:Stage IB, dead, 2639 days 4381.0
TCGA-66-2737-01A 72 years, male, stage:Stage IIB, alive, 61 days 4368.5
TCGA-77-A5GF-01A 70 years, male, stage:Stage IIA, dead, 840 days 4338.4
TCGA-85-8584-01A 71 years, male, white, stage:Stage IIA, dead, 383 days 4335.8
TCGA-56-8628-01A 78 years, male, white, stage:Stage IA, alive, 616 days 4322.5
TCGA-96-7545-01A 73 years, male, white, stage:Stage IA, dead, 1736 days 4322.0
TCGA-22-1005-01A 63 years, male, white, stage:Stage IA, dead, 1953 days 4294.9
TCGA-18-4086-01A 64 years, male, stage:Stage IB, dead, 85 days 4288.1
TCGA-56-8504-01A 74 years, male, white, stage:Stage IB, alive, 510 days 4253.3
TCGA-51-6867-01A 72 years, female, white, stage:Stage I, dead, 1856 days 4227.7
TCGA-58-8387-01A 60 years, male, white, stage:Stage IIA, dead, 403 days 4205.6
TCGA-39-5011-01A 70 years, female, white, stage:Stage IA, alive, 4053 days 4195.0
TCGA-56-A4BW-01A 55 years, male, white, stage:Stage IIA, alive, 585 days 4191.5
TCGA-77-A5G1-01A 75 years, male, stage:Stage IIIA, alive, 4026 days 4144.4
TCGA-68-8250-01A 66 years, male, black or african american, stage:Stage IA, alive, 244 days 4135.0
TCGA-66-2795-01A 68 years, male, stage:Stage IIIB, alive, 122 days 4113.3
TCGA-39-5036-01A 73 years, male, white, stage:Stage IB, alive, 2165 days 4099.5
TCGA-NC-A5HN-01A 77 years, male, white, stage:Stage IIA, alive, 1499 days 4082.4
TCGA-39-5029-01A 67 years, male, white, stage:Stage IIIA, dead, 740 days 4082.1
TCGA-O2-A52N-01A 78 years, male, white, stage:Stage I, dead, 1006 days 4075.0
TCGA-94-7033-01A 73 years, male, white, stage:Stage IB, alive, 640 days 4047.9
TCGA-77-8138-01A 74 years, male, stage:Stage IB, dead, 539 days 4024.4
TCGA-34-5928-01A 83 years, female, white, stage:Stage IIB, alive, 1196 days 4021.0
TCGA-39-5028-01A 75 years, male, white, stage:Stage IIIA, dead, 52 days 4020.1
TCGA-18-3412-01A 52 years, male, white, stage:Stage IB, dead, 345 days 4016.0
TCGA-21-5787-01A 65 years, male, black or african american, stage:Stage IIIA, dead, 329 days 3985.0
TCGA-39-5021-01A 70 years, male, white, stage:Stage IB, dead, 2086 days 3983.2
TCGA-39-5031-01A 76 years, female, stage:Stage IA, dead, 1841 days 3982.5
TCGA-22-1002-01A 69 years, male, white, stage:Stage IA, dead, 131 days 3969.4
TCGA-56-5897-01A 74 years, male, white, stage:Stage IA, alive, 378 days 3963.1
TCGA-85-A513-01A 60 years, female, asian, stage:Stage IA, alive, 910 days 3951.9
TCGA-43-7656-01A 71 years, male, white, stage:Stage IA, alive, 596 days 3937.6
TCGA-18-3407-01A 72 years, male, asian, stage:Stage IB, dead, 136 days 3934.6
TCGA-58-8386-01A 75 years, male, stage:Stage IV, dead, 1 days 3931.9
TCGA-85-8351-01A 72 years, male, white, stage:Stage IIA, alive, 510 days 3927.3
TCGA-37-4133-01A 63 years, male, white, stage:Stage IIIA, alive, 238 days 3916.6
TCGA-85-8288-01A 70 years, male, white, stage:Stage IIA, dead, 402 days 3902.9
TCGA-60-2706-01A 58 years, male, white, stage:Stage IA, alive, 2820 days 3891.9
TCGA-34-2608-01A 84 years, male, white, stage:Stage IB, dead, 1000 days 3882.7
TCGA-85-8582-01A 49 years, male, white, stage:Stage IA, alive, 1160 days 3879.6
TCGA-34-5231-01A 72 years, male, white, stage:Stage IA, dead, 1984 days 3878.8
TCGA-66-2782-01A 71 years, male, stage:Stage IIB, dead, 365 days 3873.2
TCGA-34-8455-01A 67 years, male, white, stage:Stage IV, dead, 123 days 3846.0
TCGA-37-4130-01A 56 years, male, white, stage:Stage IA, alive, 247 days 3841.9
TCGA-37-A5EN-01A 59 years, male, white, stage:Stage IIIB, alive, 660 days 3834.2
TCGA-39-5039-01A 76 years, male, white, stage:Stage IIA, dead, 544 days 3820.0
TCGA-98-A53I-01A 64 years, male, white, stage:Stage IIA, alive, 565 days 3802.5
TCGA-18-3421-01A 65 years, male, white, stage:Stage IB, alive, 2645 days 3763.9
TCGA-33-AASD-01A 83 years, male, black or african american, stage:Stage IA, dead, 2249 days 3762.3
TCGA-63-7023-01A male, stage:Stage IIA, alive, 1682 days 3751.4
TCGA-60-2707-01A 70 years, male, stage:Stage IB, dead, 667 days 3710.8
TCGA-18-3417-01A 65 years, male, stage:Stage IV, dead, 1097 days 3706.7
TCGA-66-2787-01A 57 years, male, stage:Stage IA, alive, 1217 days 3693.1
TCGA-60-2710-01A 67 years, female, white, stage:Stage IIA, alive, 2024 days 3665.7
TCGA-56-A49D-01A 67 years, male, white, stage:Stage IIIA, alive, 637 days 3654.4
TCGA-66-2800-01A 70 years, male, stage:Stage IIIB, alive, 1492 days 3650.3
TCGA-85-8049-01A 57 years, male, white, stage:Stage IB, alive, 579 days 3644.3
TCGA-37-4135-01A 68 years, male, white, stage:Stage IB, alive, 207 days 3614.9
TCGA-22-5483-01A 74 years, male, white, stage:Stage IIA, dead, 573 days 3597.5
TCGA-85-7697-01A 49 years, male, white, stage:Stage IIB, alive, 1063 days 3578.0
TCGA-85-8276-01A 62 years, male, white, stage:Stage IIA, alive, 1050 days 3557.0
TCGA-85-6560-01A 59 years, male, white, stage:Stage IIA, alive, 1259 days 3551.7
TCGA-43-6143-01A 70 years, male, white, stage:Stage IB, alive, 699 days 3516.5
TCGA-22-4594-01A 60 years, female, stage:Stage IIIA, dead, 1470 days 3516.1
TCGA-63-A5MV-01A 69 years, male, stage:Stage IIA, alive, 1100 days 3515.2
TCGA-66-2757-01A 65 years, female, stage:Stage IA, dead, 1338 days 3502.3
TCGA-43-A56U-01A 76 years, female, white, stage:Stage IA, alive, 432 days 3497.0
TCGA-66-2790-01A 72 years, male, stage:Stage IIB, alive, 699 days 3471.2
TCGA-34-5240-01A 73 years, female, white, stage:Stage IIB, alive, 1541 days 3464.9
TCGA-56-A4ZK-01A 76 years, female, white, stage:Stage IB, alive, 570 days 3456.2
TCGA-85-8070-01A 71 years, male, white, stage:Stage IB, alive, 960 days 3444.8
TCGA-22-4607-01A 75 years, male, white, stage:Stage IB, dead, 587 days 3444.1
TCGA-43-8118-01A 55 years, female, white, stage:Stage IA, dead, 89 days 3416.4
TCGA-66-2781-01A 67 years, male, stage:Stage IB, alive, 121 days 3415.9
TCGA-46-3765-01A 59 years, female, white, stage:Stage IA, alive, 405 days 3415.7
TCGA-77-8133-01A 74 years, male, stage:Stage IIA, dead, 1640 days 3397.2
TCGA-63-A5ML-01A 68 years, male, stage:Stage IB, alive, 1386 days 3395.8
TCGA-63-7022-01A female, stage:Stage IA, alive, 2073 days 3385.5
TCGA-22-4601-01A 73 years, female, white, stage:Stage IIIA, dead, 1057 days 3378.8
TCGA-85-7844-01A 71 years, male, white, stage:Stage IB, alive, 911 days 3369.1
TCGA-85-8072-01A 60 years, male, white, stage:Stage IA, alive, 932 days 3361.5
TCGA-85-8287-01A 72 years, male, white, stage:Stage IA, dead, 23 days 3354.0
TCGA-NC-A5HQ-01A 70 years, male, white, stage:Stage IIIA, dead, 448 days 3348.6
TCGA-43-6647-01A 69 years, female, white, stage:Stage IIB, alive, 757 days 3347.5
TCGA-O2-A52V-01A 75 years, female, black or african american, stage:Stage II, dead, 1335 days 3337.9
TCGA-77-8145-01A 73 years, male, stage:Stage IIIB, dead, 212 days 3336.1
TCGA-60-2714-01A 66 years, female, white, stage:Stage IIB, alive, 1531 days 3332.5
TCGA-85-A50Z-01A 57 years, male, white, stage:Stage IIA, alive, 493 days 3316.8
TCGA-85-8071-01A 52 years, male, white, stage:Stage IIA, alive, 815 days 3315.5
TCGA-60-2695-01A 74 years, female, white, stage:Stage IB, alive, 642 days 3314.6
TCGA-56-7731-01A 66 years, female, white, stage:Stage IB, dead, 3 days 3311.5
TCGA-43-2581-01A 47 years, female, white, stage:Stage IIIA, alive, 1176 days 3297.5
TCGA-66-2759-01A 66 years, male, stage:Stage IIIA, alive, 762 days 3243.5
TCGA-43-2576-01A 62 years, female, white, stage:Stage IIIA, alive, 1223 days 3238.4
TCGA-43-6771-01A 85 years, male, white, stage:Stage IB, dead, 166 days 3214.6
TCGA-85-A4JC-01A 84 years, male, white, stage:Stage IIA, dead, 604 days 3205.8
TCGA-56-6545-01A 77 years, female, white, stage:Stage IB, alive, 666 days 3196.9
TCGA-NC-A5HP-01A 69 years, male, white, stage:Stage IV, dead, 770 days 3194.8
TCGA-92-7340-01A 45 years, female, white, stage:Stage IIA, alive, 82 days 3191.5
TCGA-L3-A4E7-01A 71 years, male, white, stage:Stage IB, alive, 392 days 3186.4
TCGA-22-5472-01A 67 years, male, white, stage:Stage IB, dead, 1975 days 3180.7
TCGA-63-7021-01A male, stage:Stage IA, alive, 2142 days 3167.0
TCGA-85-6561-01A 66 years, male, white, stage:Stage IB, alive, 1224 days 3157.9
TCGA-21-1072-01A 75 years, male, white, stage:Stage IB, alive, 3016 days 3120.9
TCGA-85-A510-01A 74 years, female, white, stage:Stage IIB, alive, 482 days 3092.0
TCGA-33-AASI-01A 65 years, female, black or african american, stage:Stage IIB, dead, 1344 days 3077.5
TCGA-XC-AA0X-01A 77 years, female, black or african american, stage:Stage IA, dead, 6 days 3075.1
TCGA-39-5034-01A 73 years, female, white, stage:Stage IIB, dead, 1107 days 3043.0
TCGA-52-7812-01A 68 years, male, white, stage:'--, dead, 835 days 3041.3
TCGA-22-4613-01A 73 years, female, white, stage:Stage IA, dead, 358 days 3040.5
TCGA-18-5592-01A 57 years, male, stage:Stage IIB, alive, 1519 days 3029.7
TCGA-66-2758-01A 71 years, male, stage:Stage IB, alive, 639 days 3012.9
TCGA-51-4079-01A 73 years, female, black or african american, stage:Stage IB, dead, 12 days 3001.5
TCGA-85-A512-01A 46 years, male, white, stage:Stage IIA, alive, 465 days 2996.5
TCGA-22-1011-01A 73 years, male, white, stage:Stage IB, dead, 53 days 2991.1
TCGA-77-7338-01A 64 years, male, white, stage:Stage IB, dead, 5 days 2988.7
TCGA-77-7141-01A 64 years, male, white, stage:Stage IB, alive, 15 days 2988.2
TCGA-60-2724-01A 47 years, male, white, stage:Stage IIIA, alive, 717 days 2979.8
TCGA-77-8009-01A 68 years, male, stage:Stage IIB, dead, 1695 days 2975.6
TCGA-66-2727-01A 55 years, female, stage:Stage IB, dead, 516 days 2966.8
TCGA-77-7337-01A 65 years, male, white, stage:Stage IIB, dead, 3253 days 2921.4
TCGA-85-7843-01A 50 years, male, white, stage:Stage IIA, alive, 35 days 2920.7
TCGA-66-2763-01A 63 years, female, stage:Stage IB, alive, 30 days 2876.0
TCGA-56-7582-01A 83 years, male, white, stage:Stage IB, alive, 601 days 2875.3
TCGA-60-2712-01A 79 years, female, white, stage:Stage IIB, dead, 274 days 2874.8
TCGA-98-A53J-01A 77 years, male, white, stage:Stage IB, alive, 630 days 2863.1
TCGA-66-2792-01A 58 years, male, stage:Stage IIB, alive, 913 days 2847.2
TCGA-56-7579-01A 61 years, male, white, stage:Stage IIIA, dead, 951 days 2844.6
TCGA-66-2734-01A 62 years, female, stage:Stage IB, alive, 1311 days 2831.8
TCGA-39-5019-01A 70 years, male, white, stage:Stage IB, alive, 3387 days 2825.5
TCGA-18-3411-01A 63 years, female, stage:Stage IIIA, alive, 3576 days 2823.5
TCGA-21-A5DI-01A 77 years, male, white, stage:Stage IA, alive, 979 days 2821.4
TCGA-NC-A5HT-01A 69 years, male, white, stage:Stage IIIA, alive, 804 days 2815.8
TCGA-18-3419-01A 73 years, male, stage:Stage IIB, alive, 2811 days 2804.6
TCGA-NC-A5HR-01A 75 years, female, white, stage:Stage IIA, alive, 1244 days 2798.1
TCGA-22-5481-01A 72 years, female, white, stage:Stage IIB, dead, 2409 days 2796.6
TCGA-52-7809-01A 74 years, male, white, stage:Stage IB, dead, 166 days 2785.9
TCGA-34-7107-01A 70 years, male, white, stage:Stage II, dead, 34 days 2785.0
TCGA-56-A5DS-01A 72 years, female, white, stage:Stage IB, alive, 8 days 2769.0
TCGA-63-A5MJ-01A 54 years, male, stage:Stage IIB, alive, 1824 days 2760.8
TCGA-58-A46L-01A 73 years, male, white, stage:Stage IIIA, alive, 1723 days 2759.0
TCGA-18-4083-01A 63 years, male, white, stage:Stage IIB, dead, 188 days 2757.6
TCGA-22-5478-01A 79 years, male, stage:Stage IB, dead, 24 days 2757.2
TCGA-66-2777-01A 71 years, male, stage:Stage IB, alive, 61 days 2741.0
TCGA-77-8150-01A 64 years, male, stage:Stage IIIA, dead, 1655 days 2720.3
TCGA-77-8146-01A 72 years, male, stage:Stage IA, alive, 3189 days 2706.5
TCGA-85-7696-01A 64 years, male, white, stage:Stage IA, alive, 1111 days 2705.1
TCGA-94-7943-01A 80 years, male, white, stage:Stage IA, alive, 559 days 2692.7
TCGA-94-8491-01A 73 years, male, white, stage:Stage IIA, alive, 810 days 2680.4
TCGA-34-5236-01A 60 years, male, white, stage:Stage IIB, dead, 276 days 2666.5
TCGA-92-7341-01A 71 years, male, white, stage:Stage IB, alive, 106 days 2648.3
TCGA-77-7138-01A 67 years, male, stage:Stage IB, dead, 340 days 2646.7
TCGA-22-5479-01A 64 years, male, white, stage:Stage IB, dead, 2625 days 2643.0
TCGA-33-4587-01A 63 years, female, white, stage:Stage IB, dead, 1656 days 2625.9
TCGA-60-2696-01A 76 years, female, black or african american, stage:Stage IIA, dead, 109 days 2617.7
TCGA-43-7657-01A 68 years, female, white, stage:Stage IA, alive, 236 days 2592.4
TCGA-96-7544-01A 83 years, male, white, stage:Stage IIB, dead, 2160 days 2592.0
TCGA-68-7756-01A 84 years, male, white, stage:Stage IIIA, alive, 202 days 2589.1
TCGA-60-2720-01A 60 years, female, white, stage:Stage IB, alive, 97 days 2580.5
TCGA-56-8082-01A 80 years, female, white, stage:Stage IIA, alive, 455 days 2565.1
TCGA-96-8169-01A 67 years, female, white, stage:Stage IA, alive, 557 days 2563.7
TCGA-21-5783-01A 76 years, male, white, stage:Stage IB, dead, 2680 days 2563.0
TCGA-22-4605-01A 78 years, female, stage:Stage IB, dead, 974 days 2561.5
TCGA-56-A5DR-01A 81 years, male, white, stage:Stage IA, alive, 4 days 2558.8
TCGA-NC-A5HD-01A 79 years, male, white, stage:Stage IIB, dead, 2 days 2557.5
TCGA-43-8116-01A 73 years, male, white, stage:Stage IA, alive, 358 days 2549.8
TCGA-96-8170-01A 75 years, female, white, stage:Stage IIA, alive, 531 days 2549.2
TCGA-NC-A5HK-01A 58 years, female, white, stage:Stage IIB, alive, 128 days 2548.4
TCGA-34-5929-01A 78 years, female, white, stage:Stage IB, dead, 151 days 2546.1
TCGA-60-2719-01A 83 years, female, white, stage:Stage IB, alive, 1297 days 2545.9
TCGA-56-5898-01A 69 years, male, white, stage:Stage IA, alive, 555 days 2542.6
TCGA-56-7822-01A 75 years, male, black or african american, stage:Stage IIB, dead, 532 days 2526.6
TCGA-22-5480-01A 66 years, female, white, stage:Stage IA, dead, 2170 days 2526.4
TCGA-77-A5G3-01A 63 years, male, stage:Stage IIB, alive, 4570 days 2524.9
TCGA-77-8148-01A 68 years, male, stage:Stage IIIA, alive, 2023 days 2515.1
TCGA-68-A59I-01A 73 years, female, black or african american, stage:Stage IIIA, alive, 492 days 2513.6
TCGA-22-5491-01A 74 years, male, white, stage:Stage IA, dead, 1713 days 2510.6
TCGA-21-1077-01A 64 years, male, white, stage:Stage IIB, dead, 1058 days 2505.7
TCGA-O2-A52S-01A 57 years, female, white, stage:Stage III, dead, 387 days 2502.1
TCGA-94-7557-01A 73 years, male, black or african american, stage:Stage IB, dead, 5 days 2500.9
TCGA-60-2711-01A 64 years, female, white, stage:Stage IB, alive, 1260 days 2492.0
TCGA-66-2778-01A 68 years, female, stage:Stage IIIB, alive, 578 days 2490.5
TCGA-39-5040-01A 59 years, male, white, stage:Stage IIIA, dead, 519 days 2469.4
TCGA-98-A538-01A 67 years, male, white, stage:Stage IIB, alive, 826 days 2457.9
TCGA-56-8308-01A 79 years, male, white, stage:Stage IIB, alive, 517 days 2456.6
TCGA-56-8626-01A 59 years, male, white, stage:Stage IA, dead, 302 days 2448.9
TCGA-56-7222-01A 60 years, male, white, stage:Stage IB, dead, 562 days 2444.8
TCGA-58-A46J-01A 64 years, male, white, stage:Stage IIB, alive, 2589 days 2439.8
TCGA-18-5595-01A 50 years, male, stage:Stage IB, dead, 827 days 2428.4
TCGA-90-6837-01A 64 years, male, white, stage:Stage IIB, alive, 758 days 2404.7
TCGA-34-2596-01A 70 years, male, white, stage:Stage IIB, dead, 80 days 2403.4
TCGA-94-A5I4-01A 61 years, male, white, stage:Stage IIA, alive, 491 days 2367.8
TCGA-51-4080-01A 65 years, male, black or african american, stage:Stage IIIB, dead, 12 days 2363.2
TCGA-56-7580-01A 84 years, male, white, stage:Stage IB, alive, 925 days 2349.2
TCGA-33-6738-01A 80 years, male, white, stage:Stage IIIA, alive, 1927 days 2344.4
TCGA-66-2753-01A 69 years, male, stage:Stage IB, alive, 31 days 2312.2
TCGA-43-3394-01A 52 years, male, black or african american, stage:Stage IB, dead, 1190 days 2296.9
TCGA-77-8144-01A 70 years, male, stage:Stage IB, alive, 833 days 2281.3
TCGA-22-0944-01A 61 years, male, white, stage:Stage IB, dead, 223 days 2281.1
TCGA-58-8390-01A 70 years, male, white, stage:Stage IIA, alive, 911 days 2218.2
TCGA-92-8065-01A 74 years, female, white, stage:Stage IIB, alive, 70 days 2212.6
TCGA-63-A5MW-01A 76 years, male, stage:Stage IB, alive, 1639 days 2180.0
TCGA-92-8063-01A 52 years, male, white, stage:Stage IIIA, alive, 122 days 2178.9
TCGA-60-2703-01A 73 years, male, white, stage:Stage IIB, dead, 2945 days 2173.5
TCGA-22-4595-01A 57 years, male, white, stage:Stage IIIA, dead, 734 days 2169.0
TCGA-NK-A5D1-01A 57 years, male, white, stage:Stage IIA, alive, 511 days 2164.1
TCGA-98-A53A-01A 70 years, male, black or african american, stage:Stage IB, dead, 552 days 2160.8
TCGA-33-4533-01A 76 years, female, black or african american, stage:Stage IB, alive, 4068 days 2157.9
TCGA-66-2756-01A 68 years, male, stage:Stage IIIB, alive, 30 days 2149.9
TCGA-77-6843-01A 74 years, male, white, stage:Stage IIA, dead, 2224 days 2129.9
TCGA-77-6844-01A 74 years, male, white, stage:Stage IIIA, dead, 2284 days 2127.7
TCGA-85-8353-01A 72 years, male, white, stage:Stage IIIA, dead, 94 days 2117.6
TCGA-39-5037-01A 65 years, male, white, stage:Stage IIA, alive, 1690 days 2107.5
TCGA-43-5670-01A 70 years, male, white, stage:Stage IIA, alive, 849 days 2103.8
TCGA-37-4129-01A 52 years, female, white, stage:Stage IA, alive, 242 days 2092.2
TCGA-63-A5MB-01A 62 years, male, stage:Stage IB, alive, 3123 days 2091.5
TCGA-66-2783-01A 67 years, male, stage:Stage IIIB, alive, 759 days 2086.5
TCGA-22-1012-01A 80 years, female, white, stage:Stage IB, dead, 429 days 2068.5
TCGA-22-5482-01A 81 years, male, white, stage:Stage IB, dead, 357 days 2067.4
TCGA-66-2742-01A 70 years, male, stage:Stage IV, alive, 641 days 2041.1
TCGA-63-A5MH-01A 68 years, male, stage:Stage IA, alive, 2026 days 2040.1
TCGA-77-7139-01A 56 years, male, white, stage:Stage IIB, alive, 4261 days 2040.0
TCGA-66-2766-01A 54 years, male, stage:Stage IIIA, alive, 31 days 2039.9
TCGA-85-A4JB-01A 74 years, male, white, stage:Stage IIB, alive, 942 days 2024.5
TCGA-94-A5I6-01A 62 years, male, white, stage:Stage IIB, alive, 538 days 2019.2
TCGA-85-8666-01A 65 years, male, white, stage:Stage IB, dead, 687 days 2003.5
TCGA-85-A4CN-01A 56 years, female, white, stage:Stage IIB, alive, 1038 days 1995.4
TCGA-90-A4ED-01A 69 years, male, white, stage:Stage IB, alive, 615 days 1989.0
TCGA-34-8456-01A 71 years, female, white, stage:Stage IIA, alive, 804 days 1978.4
TCGA-77-8139-01A 72 years, male, stage:Stage IIB, alive, 3166 days 1961.3
TCGA-43-2578-01A 59 years, female, white, stage:Stage IA, dead, 684 days 1958.2
TCGA-77-8130-01A 69 years, male, stage:Stage IIB, alive, 4765 days 1945.7
TCGA-46-3768-01A 58 years, male, white, stage:Stage IIIA, dead, 299 days 1943.9
TCGA-22-5473-01A 78 years, male, white, stage:'--, dead, 1933 days 1934.7
TCGA-NC-A5HO-01A 70 years, female, white, stage:Stage IIIA, alive, 1336 days 1932.2
TCGA-43-6770-01A 59 years, female, black or african american, stage:Stage IB, alive, 653 days 1920.6
TCGA-68-7755-01A 60 years, female, white, stage:Stage IIA, alive, 83 days 1919.1
TCGA-34-A5IX-01A 80 years, male, white, stage:Stage IIB, alive, 1031 days 1913.3
TCGA-85-A4CL-01A 65 years, male, white, stage:Stage IA, dead, 921 days 1874.5
TCGA-85-A50M-01A 47 years, male, asian, stage:Stage IIA, dead, 826 days 1857.9
TCGA-21-1082-01A 61 years, male, white, stage:Stage IB, alive, 3644 days 1856.0
TCGA-77-A5GA-01A 76 years, male, stage:Stage IB, alive, 1280 days 1837.4
TCGA-22-A5C4-01A 70 years, male, white, stage:Stage IIA, alive, 671 days 1824.8
TCGA-22-4591-01A 80 years, male, white, stage:Stage IIIA, dead, 623 days 1823.3
TCGA-63-A5MG-01A 68 years, male, stage:Stage IB, alive, 2148 days 1816.7
TCGA-56-8624-01A 84 years, male, white, stage:Stage IIB, alive, 420 days 1789.4
TCGA-77-8154-01A 67 years, male, stage:Stage IA, alive, 1841 days 1762.6
TCGA-33-4582-01A 55 years, male, white, stage:Stage IA, dead, 3149 days 1759.1
TCGA-NC-A5HG-01A 59 years, male, white, stage:Stage IIIA, alive, 1963 days 1747.7
TCGA-43-A56V-01A 61 years, male, black or african american, stage:Stage IIIA, alive, 366 days 1744.9
TCGA-56-8622-01A 68 years, male, white, stage:Stage IB, alive, 55 days 1741.5
TCGA-MF-A522-01A 54 years, male, white, stage:Stage IB, dead, 360 days 1729.9
TCGA-21-1080-01A 66 years, male, white, stage:Stage IB, alive, 3724 days 1715.7
TCGA-22-4593-01A 77 years, male, white, stage:Stage IIA, dead, 1067 days 1711.6
TCGA-98-8021-01A 75 years, female, white, stage:Stage IA, alive, 937 days 1707.6
TCGA-98-A539-01A 63 years, male, white, stage:Stage IIB, alive, 173 days 1673.7
TCGA-22-5477-01A 65 years, male, white, stage:Stage IA, dead, 1346 days 1673.3
TCGA-56-8304-01A 73 years, female, white, stage:Stage IA, alive, 106 days 1660.4
TCGA-77-7463-01A 75 years, male, white, stage:Stage IB, dead, 1423 days 1657.3
TCGA-85-8052-01A 53 years, male, white, stage:Stage IIB, alive, 734 days 1656.1
TCGA-58-8392-01A 70 years, male, white, stage:Stage IB, dead, 501 days 1654.3
TCGA-56-7221-01A 79 years, male, white, stage:Stage IB, alive, 608 days 1635.5
TCGA-34-5927-01A 70 years, female, white, stage:Stage IA, alive, 1361 days 1620.3
TCGA-21-1078-01A 77 years, male, white, stage:Stage IB, dead, 474 days 1610.7
TCGA-85-A4QR-01A 67 years, male, white, stage:Stage IB, alive, 600 days 1608.2
TCGA-37-5819-01A 64 years, male, white, stage:Stage IIIA, alive, 103 days 1595.8
TCGA-85-8580-01A 52 years, female, white, stage:Stage IB, alive, 1113 days 1593.8
TCGA-60-2722-01A 66 years, male, white, stage:Stage IIB, alive, 908 days 1580.1
TCGA-33-A4WN-01A 60 years, male, white, stage:Stage IB, dead, 143 days 1575.0
TCGA-77-7140-01A 69 years, female, white, stage:Stage IIB, dead, 632 days 1565.5
TCGA-56-8629-01A 63 years, male, white, stage:Stage IIA, alive, 481 days 1552.3
TCGA-77-8128-01A 60 years, male, stage:Stage IIIA, dead, 1150 days 1526.9
TCGA-21-5786-01A 64 years, male, white, stage:Stage IB, alive, 1032 days 1525.7
TCGA-56-A62T-01A 78 years, male, black or african american, stage:Stage IIA, alive, 440 days 1521.7
TCGA-85-A4QQ-01A 68 years, male, white, stage:Stage IB, dead, 927 days 1516.6
TCGA-33-AASJ-01A 60 years, male, black or african american, stage:Stage IB, dead, 3600 days 1513.0
TCGA-85-8352-01A 67 years, male, white, stage:Stage IIIA, dead, 161 days 1509.7
TCGA-22-5485-01A 58 years, female, white, stage:Stage IA, dead, 916 days 1480.5
TCGA-33-6737-01A 71 years, male, white, stage:Stage IIIA, dead, 601 days 1440.8
TCGA-66-2754-01A 67 years, male, stage:Stage IIIA, alive, 61 days 1433.4
TCGA-46-6025-01A 71 years, male, white, stage:Stage IIB, alive, 324 days 1428.6
TCGA-56-8305-01A 72 years, male, white, stage:Stage IB, alive, 105 days 1397.3
TCGA-85-A5B5-01A 58 years, male, white, stage:Stage IA, alive, 111 days 1397.1
TCGA-60-2708-01A 64 years, female, white, stage:Stage IIB, alive, 2447 days 1390.3
TCGA-90-7964-01A 70 years, male, white, stage:Stage IB, alive, 428 days 1378.5
TCGA-LA-A7SW-01A 71 years, male, black or african american, stage:Stage IIIA, dead, 408 days 1353.8
TCGA-60-2716-01A 39 years, male, stage:Stage IIB, alive, 1475 days 1341.2
TCGA-LA-A446-01A 68 years, male, white, stage:Stage IA, alive, 401 days 1332.1
TCGA-96-A4JK-01A 65 years, male, white, stage:Stage IIA, alive, 589 days 1311.3
TCGA-94-8035-01A 64 years, male, white, stage:Stage IIB, alive, 122 days 1309.4
TCGA-J1-A4AH-01A 70 years, male, white, stage:Stage IIA, alive, 581 days 1299.1
TCGA-O2-A52W-01A 63 years, male, black or african american, stage:Stage I, dead, 261 days 1286.0
TCGA-56-8307-01A 55 years, female, white, stage:Stage IIB, alive, 818 days 1264.2
TCGA-77-A5G6-01A 66 years, male, stage:Stage IIIA, dead, 678 days 1264.1
TCGA-39-5027-01A 73 years, male, white, stage:Stage IB, alive, 3108 days 1256.7
TCGA-33-AAS8-01A 59 years, female, black or african american, stage:Stage IA, dead, 1114 days 1248.6
TCGA-21-5782-01A 68 years, female, white, stage:Stage IB, dead, 962 days 1235.6
TCGA-33-A5GW-01A 67 years, male, white, stage:Stage IIA, dead, 9 days 1235.6
TCGA-77-8140-01A 66 years, female, stage:Stage IIB, dead, 351 days 1233.8
TCGA-56-8083-01A 56 years, male, white, stage:Stage IB, alive, 150 days 1212.9
TCGA-90-7769-01A 55 years, male, white, stage:Stage IIB, alive, 358 days 1183.3
TCGA-77-8143-01A 76 years, male, stage:Stage IIIA, dead, 803 days 1182.8
TCGA-58-8391-01A 57 years, female, white, stage:Stage IIIA, alive, 2167 days 1158.2
TCGA-L3-A524-01A 45 years, female, white, stage:Stage IIB, dead, 490 days 1117.9
TCGA-60-2726-01A 56 years, male, white, stage:Stage IIA, dead, 358 days 1107.4
TCGA-85-8354-01A 53 years, male, white, stage:Stage IB, alive, 995 days 1094.1
TCGA-O2-A5IB-01A 71 years, female, white, stage:Stage III, dead, 340 days 1090.5
TCGA-NC-A5HI-01A 68 years, female, white, stage:Stage IB, alive, 1743 days 1087.6
TCGA-43-A474-01A 66 years, male, white, stage:Stage IIA, alive, 353 days 1067.9
TCGA-85-8479-01A 66 years, male, white, stage:Stage IA, alive, 468 days 1044.6
TCGA-34-2600-01A 76 years, female, white, stage:Stage IA, dead, 1874 days 1037.2
TCGA-43-6773-01A 76 years, male, white, stage:Stage IIB, dead, 116 days 1002.9
TCGA-63-A5MI-01A 65 years, male, stage:Stage IIIA, alive, 1784 days 981.8
TCGA-85-A53L-01A 63 years, male, asian, stage:Stage IIA, alive, 377 days 957.5
TCGA-33-4532-01A 68 years, male, white, stage:Stage IB, dead, 3924 days 953.8
TCGA-85-6798-01A 57 years, male, white, stage:Stage IIIA, dead, 195 days 953.4
TCGA-NC-A5HH-01A 53 years, male, white, stage:Stage IA, alive, 37 days 941.5
TCGA-NK-A5CR-01A 77 years, male, stage:Stage IB, alive, 2542 days 928.2
TCGA-56-7730-01A 73 years, male, white, stage:Stage IIA, dead, 198 days 890.9
TCGA-94-8490-01A 70 years, male, white, stage:Stage IIB, alive, 153 days 879.7
TCGA-21-1081-01A 69 years, male, white, stage:Stage IIB, dead, 284 days 878.7
TCGA-85-8664-01A 73 years, male, white, stage:Stage IIB, dead, 550 days 874.2
TCGA-66-2793-01A 68 years, male, stage:Stage IIIB, dead, 306 days 872.3
TCGA-21-1075-01A 57 years, male, white, stage:Stage IIB, alive, 2134 days 871.0
TCGA-52-7810-01A 60 years, female, white, stage:Stage IIB, alive, 923 days 863.6
TCGA-46-6026-01A 81 years, male, white, stage:Stage IIB, alive, 423 days 847.7
TCGA-33-4586-01A 57 years, male, white, stage:Stage IIIA, dead, 428 days 777.1
TCGA-56-A4BX-01A 70 years, male, white, stage:Stage IIA, alive, 405 days 762.0
TCGA-58-A46N-01A 52 years, male, white, stage:Stage IB, alive, 910 days 714.0
TCGA-77-8153-01A 77 years, female, stage:Stage IB, alive, 1992 days 641.9
TCGA-56-7223-01A 66 years, male, white, stage:Stage IIIA, dead, 442 days 633.1
TCGA-51-4081-01A 55 years, male, white, stage:Stage IIB, alive, 911 days 619.9
TCGA-77-6845-01A 69 years, male, white, stage:Stage IIB, dead, 708 days 571.6
TCGA-33-AASL-01A 57 years, female, black or african american, stage:Stage IA, dead, 826 days 437.7
TCGA-NC-A5HF-01A 74 years, male, white, stage:Stage IIIB, dead, 138 days 355.2
TCGA-63-A5MY-01A 63 years, male, stage:Stage IA, alive, 1052 days 197.1
TCGA-33-AASB-01A 66 years, male, black or african american, stage:Stage IB, dead, 211 days 80.3
Show allShow less
LUNG SQUAMOUS CELL CARCINOMA (VALIDATION) - Interactive survival scatter ploti

The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.

The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".

Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.

Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.

& Survival analysisi

Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.

B2M is not prognostic in Lung Squamous Cell Carcinoma (validation)


Stage:

Survival analysis
Current cut offi

Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.

:
Best expression cut offi

Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .

When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.

: 7185.68
Median expressioni

Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.

: N/A
Median follow up timei

Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.

: N/A
P scorei

Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.

N/A
5-year survival highi

5-year survival for patients with higher expression than the expression cutoff.

For melanoma and glioma, 3-year survival is shown.

N/A
5-year survival lowi

5-year survival for patients with lower expression than the expression cutoff.

For melanoma and glioma, 3-year survival is shown.

N/A
TCGA RNA samplesi

RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.

Average pTPM 6999.7
Number of samples 68
Samples
Sample Description pTPM
L715 69 years, female, stage:Stage IIIA, dead, 150 days 14796.2
L864 66 years, female, stage:Stage IA, alive, 2192 days 14471.1
L755 82 years, male, stage:Stage IIA, dead, 227 days 13094.8
L751 59 years, female, stage:Stage IIIA, alive, 1600 days 12485.5
L490 58 years, male, stage:Stage IA, dead, 716 days 12184.7
L633 77 years, female, stage:Stage IA, alive, 2102 days 12038.1
L472 71 years, male, stage:Stage IB, dead, 423 days 11682.1
L884 71 years, male, stage:Stage IIA, alive, 1627 days 10979.3
L685 71 years, female, stage:Stage IIB, alive, 1944 days 10252.5
L488 61 years, female, stage:Stage IIA, alive, 2993 days 9636.1
L712 61 years, male, stage:Stage IA, alive, 1698 days 9211.7
L644 67 years, male, stage:Stage IA, dead, 282 days 9171.4
L652 82 years, male, stage:Stage IA, dead, 5 days 9152.8
L442 75 years, female, stage:Stage IB, dead, 2433 days 9118.3
L767 67 years, male, stage:Stage IA, alive, 1718 days 8720.0
L650 69 years, female, stage:Stage IB, dead, 986 days 8499.3
L572 58 years, male, stage:Stage IA, alive, 2532 days 8412.3
L655 62 years, male, stage:Stage IIA, dead, 1603 days 8412.0
L856 69 years, male, stage:Stage IA, dead, 1465 days 8195.4
L824 70 years, male, stage:Stage IA, dead, 665 days 8160.0
L736 67 years, male, stage:Stage IA, dead, 1195 days 8019.9
L452 62 years, male, stage:Stage IIIA, dead, 3115 days 7968.6
L468 53 years, male, stage:Stage IB, alive, 3004 days 7852.8
L444 74 years, female, stage:Stage IIB, alive, 3337 days 7799.5
L744 75 years, male, stage:Stage IA, alive, 1614 days 7799.2
L456 48 years, male, stage:Stage IIA, dead, 1660 days 7597.9
L723 67 years, male, stage:Stage IIA, dead, 433 days 7525.0
L858 69 years, female, stage:Stage IIB, dead, 558 days 7481.9
L817 76 years, female, stage:Stage IIIA, dead, 1279 days 7255.8
L747 74 years, female, stage:Stage IA, dead, 1112 days 7226.4
L760 80 years, male, stage:Stage IIA, alive, 1895 days 7145.0
L753 61 years, male, stage:Stage IIA, alive, 1705 days 6951.8
L464 66 years, male, stage:Stage IB, dead, 1935 days 6870.8
L406 64 years, male, stage:Stage IA, alive, 3057 days 6807.7
L739 49 years, female, stage:Stage IIIA, dead, 352 days 6634.7
L466 65 years, female, stage:Stage IIIA, dead, 412 days 6529.1
L756 72 years, male, stage:Stage IB, alive, 1796 days 6423.5
L496 77 years, male, stage:Stage IB, alive, 2761 days 6367.2
L483 65 years, male, stage:Stage IB, dead, 77 days 6229.4
L788 54 years, female, stage:Stage IA, alive, 3385 days 6076.1
L852 64 years, male, stage:Stage IB, dead, 700 days 5934.6
L608 73 years, male, stage:Stage IA, alive, 2350 days 5785.9
L470 78 years, female, stage:Stage IB, dead, 1774 days 5749.2
L758 84 years, male, stage:Stage IA, dead, 1562 days 5734.6
L820 73 years, female, stage:Stage IA, alive, 2405 days 5672.6
L854 62 years, female, stage:Stage IB, alive, 2256 days 5670.4
L881 70 years, male, stage:Stage IB, alive, 1752 days 5612.0
L658 65 years, female, stage:Stage IIB, alive, 2083 days 5442.7
L642 67 years, male, stage:Stage IB, dead, 1167 days 5436.7
L539 78 years, male, stage:Stage IB, dead, 370 days 5273.6
L420 57 years, female, stage:Stage IIB, dead, 295 days 5098.9
L860 77 years, male, stage:Stage IA, alive, 2056 days 5012.8
L661 66 years, male, stage:Stage IA, dead, 1123 days 4992.3
L886 71 years, male, stage:Stage IB, dead, 1932 days 4955.3
L604 67 years, male, stage:Stage IIA, dead, 286 days 4773.4
L559 72 years, male, stage:Stage IIB, alive, 2615 days 4768.9
L563 61 years, female, stage:Stage IIB, dead, 1216 days 4636.5
L586 67 years, male, stage:Stage IIA, dead, 784 days 4632.2
L592 61 years, male, stage:Stage IB, alive, 2368 days 4487.9
L529 79 years, female, stage:Stage IA, alive, 2775 days 4258.7
L459 75 years, male, stage:Stage IIA, alive, 3181 days 4223.7
L719 63 years, male, stage:Stage IB, alive, 1615 days 3500.4
L818 67 years, male, stage:Stage IB, alive, 2480 days 2906.8
L857 69 years, male, stage:Stage IB, dead, 226 days 2782.2
L447 67 years, male, stage:Stage IIB, alive, 3203 days 2228.5
L568 77 years, female, stage:Stage IIB, dead, 71 days 2079.9
L457 46 years, female, stage:Stage IIA, alive, 2901 days 1656.4
L534 66 years, male, stage:Stage IIA, alive, 2693 days 1440.0
Show allShow less
LUNG ADENOCARCINOMA - Protein relative expression (CPTAC)
Number of samples 213
Samples
Sample ID Sample type nRPX
CPT0113210003 Tumor 1.2
CPT0011710004 Tumor 1.2
CPT0125810003 Tumor 1.1
CPT0021450003 Tumor 0.7
CPT0118200003 Tumor 0.6
CPT0104760003 Normal 0.6
CPT0105250003 Normal 0.6
CPT0105060003 Tumor 0.6
CPT0086770003 Normal 0.5
CPT0013630003 Normal 0.5
CPT0105190003 Normal 0.5
CPT0147100003 Normal 0.5
CPT0063750003 Normal 0.5
CPT0090700003 Tumor 0.5
CPT0104650003 Normal 0.5
CPT0068800003 Tumor 0.5
CPT0015420003 Normal 0.5
CPT0083780003 Tumor 0.5
CPT0110890003 Normal 0.4
CPT0090720003 Normal 0.4
CPT0147080004 Tumor 0.4
CPT0109760003 Normal 0.4
CPT0146800003 Normal 0.4
CPT0105510003 Tumor 0.4
CPT0105330003 Tumor 0.4
CPT0105710003 Tumor 0.4
CPT0067290003 Normal 0.4
CPT0090370003 Normal 0.4
CPT0112080003 Normal 0.4
CPT0102480003 Normal 0.4
CPT0092530003 Tumor 0.4
CPT0021490003 Normal 0.4
CPT0105550003 Normal 0.3
CPT0068650003 Normal 0.3
CPT0147500003 Normal 0.3
CPT0109740004 Tumor 0.3
CPT0105980003 Normal 0.3
CPT0013600003 Tumor 0.3
CPT0008450003 Tumor 0.3
CPT0111480003 Normal 0.3
CPT0091260003 Normal 0.3
CPT0090200003 Normal 0.3
CPT0068830003 Normal 0.3
CPT0001810003 Normal 0.3
CPT0118620003 Tumor 0.3
CPT0014930003 Normal 0.3
CPT0083810003 Normal 0.3
CPT0011750003 Normal 0.3
CPT0118240003 Normal 0.3
CPT0118360003 Normal 0.3
CPT0110980004 Tumor 0.2
CPT0118340003 Tumor 0.2
CPT0106110003 Tumor 0.2
CPT0069370003 Normal 0.2
CPT0000930003 Normal 0.2
CPT0090600003 Normal 0.2
CPT0105610003 Normal 0.2
CPT0067110003 Normal 0.2
CPT0146600003 Normal 0.2
CPT0147900003 Normal 0.2
CPT0105740003 Normal 0.2
CPT0089360003 Normal 0.2
CPT0148000003 Normal 0.2
CPT0067950003 Normal 0.2
CPT0023310003 Tumor 0.2
CPT0063840003 Normal 0.2
CPT0001970003 Normal 0.2
CPT0118650003 Normal 0.2
CPT0146980004 Tumor 0.2
CPT0146700003 Normal 0.2
CPT0062810003 Normal 0.2
CPT0091870003 Normal 0.2
CPT0001960003 Tumor 0.2
CPT0109850003 Normal 0.1
CPT0105370004 Normal 0.1
CPT0110860004 Tumor 0.1
CPT0115090003 Normal 0.1
CPT0148300003 Normal 0.1
CPT0082740004 Tumor 0.1
CPT0079850003 Normal 0.1
CPT0082850004 Tumor 0.1
CPT0118160003 Tumor 0.1
CPT0067070003 Tumor 0.1
CPT0013910003 Normal 0.1
CPT0146780004 Tumor 0.1
CPT0113220003 Normal 0.1
CPT0125830003 Normal 0.1
CPT0092940003 Normal 0.1
CPT0104630003 Tumor 0.1
CPT0114010003 Normal 0.1
CPT0090340003 Tumor 0.1
CPT0070080003 Normal 0.1
CPT0023320003 Normal 0.1
CPT0069550003 Normal 0.1
CPT0083420003 Normal 0.1
CPT0118600003 Normal 0.1
CPT0105940003 Tumor 0.1
CPT0069520003 Tumor 0.1
CPT0068130003 Normal 0.1
CPT0069360003 Tumor 0.1
CPT0066810003 Normal 0.1
CPT0052940004 Tumor 0.1
CPT0118180003 Normal 0.1
CPT0008420003 Normal 0.1
CPT0118890003 Normal 0.1
CPT0001390003 Normal 0.1
CPT0105010004 Normal 0.0
CPT0086310003 Tumor 0.0
CPT0014290003 Normal 0.0
CPT0102450003 Tumor 0.0
CPT0147980004 Tumor 0.0
CPT0083140003 Normal 0.0
CPT0146880004 Tumor 0.0
CPT0112060003 Tumor 0.0
CPT0084140003 Tumor 0.0
CPT0092250003 Normal 0.0
CPT0067450003 Tumor 0.0
CPT0105270003 Tumor 0.0
CPT0067250003 Tumor 0.0
CPT0147880004 Tumor 0.0
CPT0082890003 Normal 0.0
CPT0011930003 Normal 0.0
CPT0109700003 Normal 0.0
CPT0147400003 Normal 0.0
CPT0114690003 Normal 0.0
CPT0001590003 Normal 0.0
CPT0115070003 Tumor 0.0
CPT0111590003 Normal 0.0
CPT0084170003 Normal 0.0
CPT0067470004 Normal 0.0
CPT0079830003 Tumor 0.0
CPT0067770003 Normal 0.0
CPT0063730003 Tumor 0.0
CPT0090170004 Tumor 0.0
CPT0113990003 Tumor 0.0
CPT0086320003 Normal 0.0
CPT0055100004 Tumor 0.0
CPT0109710003 Normal 0.0
CPT0147480004 Tumor 0.0
CPT0008410003 Tumor 0.0
CPT0111300003 Tumor 0.0
CPT0066780003 Tumor 0.0
CPT0015410003 Tumor 0.0
CPT0104750003 Tumor 0.0
CPT0148100003 Normal 0.0
CPT0066890003 Tumor -0.1
CPT0090570004 Tumor -0.1
CPT0090860003 Tumor -0.1
CPT0001690003 Normal -0.1
CPT0147000003 Normal -0.1
CPT0067940003 Tumor -0.1
CPT0090900004 Normal -0.1
CPT0070060003 Tumor -0.1
CPT0066930003 Normal -0.1
CPT0097600003 Normal -0.1
CPT0069720003 Normal -0.1
CPT0082770003 Normal -0.1
CPT0001580009 Tumor -0.1
CPT0114880003 Normal -0.1
CPT0105680003 Normal -0.1
CPT0014860003 Tumor -0.1
CPT0001070003 Normal -0.1
CPT0109830004 Tumor -0.1
CPT0069700003 Tumor -0.1
CPT0067620003 Tumor -0.2
CPT0052170004 Tumor -0.2
CPT0148200003 Normal -0.2
CPT0063810003 Tumor -0.2
CPT0118830003 Normal -0.2
CPT0147380004 Tumor -0.2
CPT0053040004 Tumor -0.2
CPT0105230003 Tumor -0.2
CPT0051690004 Tumor -0.2
CPT0001660013 Tumor -0.2
CPT0147600003 Normal -0.2
CPT0105630003 Tumor -0.2
CPT0105600003 Tumor -0.2
CPT0118010003 Normal -0.2
CPT0014260003 Tumor -0.2
CPT0106100003 Normal -0.2
CPT0148180004 Tumor -0.2
CPT0118880003 Tumor -0.3
CPT0001800013 Tumor -0.3
CPT0068610003 Tumor -0.3
CPT0091240003 Tumor -0.3
CPT0083390004 Tumor -0.3
CPT0118570003 Tumor -0.3
CPT0000920017 Tumor -0.3
CPT0097580003 Tumor -0.3
CPT0091860003 Tumor -0.3
CPT0086750003 Tumor -0.4
CPT0104970003 Tumor -0.4
CPT0013880003 Tumor -0.4
CPT0083100003 Tumor -0.4
CPT0092930003 Tumor -0.4
CPT0114660004 Tumor -0.4
CPT0109680004 Tumor -0.4
CPT0001380003 Tumor -0.5
CPT0089340003 Tumor -0.5
CPT0068100003 Tumor -0.5
CPT0098130003 Tumor -0.5
CPT0001060010 Tumor -0.6
CPT0118810003 Tumor -0.6
CPT0117970003 Tumor -0.7
CPT0146680004 Tumor -0.7
CPT0109720004 Tumor -0.8
CPT0114840003 Tumor -0.8
CPT0147580004 Tumor -0.8
CPT0148280004 Tumor -0.9
CPT0092240003 Tumor -0.9
CPT0011910004 Tumor -0.9
CPT0146580004 Tumor N/A
CPT0148080004 Tumor N/A
Show allShow less
LUNG SQUAMOUS CELL CARCINOMA - Protein relative expression (CPTAC)
Number of samples 212
Samples
Sample ID Sample type nRPX
CPT0217420003 Tumor 1.5
CPT0217490003 Normal 1.4
CPT0086270003 Normal 1.3
CPT0104950003 Normal 1.2
CPT0091090003 Normal 1.1
CPT0197210003 Tumor 1.1
CPT0128900003 Normal 1.1
CPT0227420003 Normal 1.0
CPT0102840003 Normal 1.0
CPT0130440004 Normal 0.9
CPT0146400003 Normal 0.9
CPT0187370003 Tumor 0.9
CPT0195520003 Normal 0.9
CPT0197380003 Normal 0.9
CPT0209040003 Normal 0.9
CPT0204600003 Tumor 0.9
CPT0010050003 Tumor 0.8
CPT0237060004 Tumor 0.8
CPT0208770003 Tumor 0.8
CPT0208780003 Normal 0.8
CPT0112730003 Normal 0.8
CPT0175260003 Tumor 0.8
CPT0126470003 Normal 0.8
CPT0069900003 Normal 0.8
CPT0187380003 Normal 0.8
CPT0089880003 Tumor 0.8
CPT0245780003 Tumor 0.8
CPT0191930003 Normal 0.7
CPT0130310003 Normal 0.7
CPT0197480003 Tumor 0.7
CPT0086260003 Tumor 0.7
CPT0223820003 Normal 0.7
CPT0219390003 Normal 0.7
CPT0202020008 Tumor 0.7
CPT0147700003 Normal 0.7
CPT0234580003 Normal 0.7
CPT0237080003 Normal 0.7
CPT0111000004 Normal 0.7
CPT0117720003 Tumor 0.7
CPT0241210003 Normal 0.7
CPT0186210003 Normal 0.6
CPT0128890003 Tumor 0.6
CPT0108600003 Normal 0.6
CPT0191710003 Tumor 0.6
CPT0083990003 Normal 0.6
CPT0202040003 Normal 0.6
CPT0023500003 Normal 0.6
CPT0117770003 Normal 0.6
CPT0183250004 Tumor 0.5
CPT0079110003 Normal 0.5
CPT0130070003 Normal 0.5
CPT0197740003 Tumor 0.5
CPT0087210003 Normal 0.5
CPT0234950004 Normal 0.5
CPT0010060003 Normal 0.5
CPT0183270003 Normal 0.5
CPT0227400003 Tumor 0.5
CPT0108560003 Tumor 0.5
CPT0063430003 Tumor 0.5
CPT0105430003 Normal 0.5
CPT0079060003 Normal 0.5
CPT0192590004 Normal 0.4
CPT0237780003 Normal 0.4
CPT0196820003 Normal 0.4
CPT0245840003 Normal 0.4
CPT0197520003 Normal 0.4
CPT0079050003 Tumor 0.4
CPT0147200003 Normal 0.4
CPT0104360003 Tumor 0.4
CPT0204660003 Normal 0.4
CPT0112600003 Normal 0.4
CPT0175160003 Normal 0.4
CPT0233330003 Normal 0.4
CPT0146380004 Tumor 0.4
CPT0202350004 Tumor 0.3
CPT0068320003 Normal 0.3
CPT0197860003 Normal 0.3
CPT0112540003 Tumor 0.3
CPT0222730003 Tumor 0.3
CPT0245830003 Tumor 0.3
CPT0104930003 Tumor 0.3
CPT0098800003 Normal 0.3
CPT0197150003 Tumor 0.3
CPT0191750003 Normal 0.3
CPT0237690004 Tumor 0.3
CPT0079100003 Tumor 0.3
CPT0225470003 Normal 0.3
CPT0126390003 Tumor 0.3
CPT0147180004 Tumor 0.3
CPT0197170003 Normal 0.3
CPT0136640003 Tumor 0.3
CPT0191860003 Tumor 0.3
CPT0202400004 Normal 0.3
CPT0202720003 Tumor 0.3
CPT0204820003 Normal 0.3
CPT0175270003 Normal 0.2
CPT0209510003 Normal 0.2
CPT0238110004 Tumor 0.2
CPT0236430003 Normal 0.2
CPT0186140003 Normal 0.2
CPT0064050003 Normal 0.2
CPT0091050003 Tumor 0.2
CPT0209020004 Tumor 0.2
CPT0233160003 Normal 0.2
CPT0221220003 Normal 0.2
CPT0007740003 Tumor 0.2
CPT0218310003 Normal 0.2
CPT0136660003 Normal 0.2
CPT0126450003 Tumor 0.2
CPT0221200003 Tumor 0.2
CPT0023470003 Tumor 0.2
CPT0245790003 Normal 0.2
CPT0063500003 Normal 0.1
CPT0218280003 Tumor 0.1
CPT0175410003 Normal 0.1
CPT0126400003 Normal 0.1
CPT0245890003 Normal 0.1
CPT0237710003 Normal 0.1
CPT0146500003 Normal 0.1
CPT0227070003 Normal 0.1
CPT0205000003 Normal 0.1
CPT0063480003 Tumor 0.1
CPT0237990003 Normal 0.1
CPT0130410003 Tumor 0.1
CPT0202580004 Normal 0.1
CPT0202740003 Normal 0.1
CPT0197100003 Normal 0.1
CPT0209490003 Tumor 0.1
CPT0232690003 Normal 0.1
CPT0195510003 Tumor 0.1
CPT0234820003 Normal 0.1
CPT0123370003 Normal 0.1
CPT0130030003 Tumor 0.1
CPT0204990003 Tumor 0.0
CPT0202220004 Normal 0.0
CPT0115860003 Normal 0.0
CPT0234560003 Tumor 0.0
CPT0241170003 Tumor 0.0
CPT0219360003 Tumor 0.0
CPT0202170003 Tumor 0.0
CPT0175560003 Tumor 0.0
CPT0126830003 Normal 0.0
CPT0232670003 Tumor 0.0
CPT0063440003 Normal 0.0
CPT0222740003 Normal 0.0
CPT0233600003 Tumor 0.0
CPT0245880003 Tumor 0.0
CPT0221660003 Normal -0.1
CPT0192540004 Tumor -0.1
CPT0115830003 Tumor -0.1
CPT0130270003 Tumor -0.1
CPT0007760003 Normal -0.1
CPT0146480004 Tumor -0.1
CPT0225380003 Tumor -0.1
CPT0237570003 Normal -0.1
CPT0091620003 Normal -0.1
CPT0064040003 Tumor -0.1
CPT0237760003 Tumor -0.1
CPT0196810003 Tumor -0.1
CPT0237430003 Normal -0.1
CPT0001030003 Normal -0.1
CPT0112650003 Tumor -0.2
CPT0123350003 Tumor -0.2
CPT0238130003 Normal -0.2
CPT0186130003 Tumor -0.2
CPT0207250003 Normal -0.2
CPT0126760003 Normal -0.2
CPT0112580003 Tumor -0.2
CPT0112550003 Normal -0.2
CPT0098770003 Tumor -0.2
CPT0233640003 Normal -0.2
CPT0112660003 Normal -0.2
CPT0186180003 Tumor -0.2
CPT0234930004 Tumor -0.2
CPT0126810003 Tumor -0.2
CPT0090440003 Tumor -0.2
CPT0104380003 Normal -0.2
CPT0237970004 Tumor -0.3
CPT0102790003 Tumor -0.3
CPT0207210003 Tumor -0.3
CPT0126740003 Tumor -0.3
CPT0091610003 Tumor -0.3
CPT0069890003 Tumor -0.3
CPT0234790003 Tumor -0.4
CPT0112720003 Tumor -0.4
CPT0223790003 Tumor -0.4
CPT0083980003 Tumor -0.4
CPT0087190003 Tumor -0.4
CPT0204800003 Tumor -0.4
CPT0068280003 Tumor -0.4
CPT0190550003 Tumor -0.4
CPT0237210003 Normal -0.5
CPT0175390003 Tumor -0.5
CPT0147680004 Tumor -0.5
CPT0237200004 Tumor -0.5
CPT0101130003 Tumor -0.5
CPT0236420003 Tumor -0.5
CPT0175120003 Tumor -0.6
CPT0221650003 Tumor -0.6
CPT0237410004 Tumor -0.6
CPT0233120003 Tumor -0.6
CPT0091820003 Tumor -0.6
CPT0197090003 Tumor -0.6
CPT0233320003 Tumor -0.7
CPT0202530004 Tumor -0.7
CPT0111150004 Tumor -0.7
CPT0227020003 Tumor -0.8
CPT0001020003 Tumor -0.8
CPT0105420003 Tumor -0.8
CPT0237550004 Tumor -0.8
CPT0126670003 Tumor -0.9
CPT0126530003 Tumor -1.3
Show allShow less
LUNG CANCER - Protein expressioni

A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.

Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.

 

Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.


Antibody HPA006361

Antibody CAB002572
 Staining
  High
  Medium
  Low
  Not detected
 Intensity
  Strong
  Moderate
  Weak
  Negative
 Quantity
  >75%
  75%-25%
  <25%
  None
 Location
  Nuclear
  Cytoplasmic/membranous
  Cytoplasmic/membranous,nuclear
  None
Adenocarcinoma, NOS
Squamous cell carcinoma, NOS
Carcinoid, malignant, NOS
Neoplasm, malignant, NOS

Contact

  • NEWS ARTICLES
  • PRESS ROOM

The Project

  • INTRODUCTION
  • ORGANIZATION
  • PUBLICATIONS

The Human Protein Atlas

  • DOWNLOADABLE DATA
  • LICENCE & CITATION
  • HELP & FAQ
The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.


contact@proteinatlas.org