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BRAIN MEDULLA OBLONGATA Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS MEDULLA OBLONGATA
MIDBRAIN OLFACTORY BULB PITUITARY GLAND PONS RETINA SPINAL CORD THALAMUS WHITE MATTER
PRIMARY MOUSE DATA
ANTIBODIES
AND
VALIDATION
Brain proteome
Medulla oblongata
MEDULLA OBLONGATA - Expression summary
Mouse brain, Intensity
Medulla oblongatai

Protein expression in mouse brain using immunofluorescence is reported as mean fluorescence intensity .

73.850
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
HPA Brain:97.6 nTPM
FANTOM5:25.9 Scaled Tags Per Million
Pig:18.5 nTPM

MEDULLA OBLONGATA - Mouse brain profilei

Protein expression in mouse brain using immunofluorescence is reported as fluorescence intensity .

, antibody CAB078782
Medulla oblongata mean intensity 73.850
intensityi

Protein expression in mouse brain using immunofluorescence is reported as mean fluorescence intensity .

FRONT BACK
Nucleus of the solitary tract 57.721
Raphe magnus nucleus 39.745
Cochlear nucleus 4.271
Lateral paragigantocellular nucleus 36.632
Raphe pallidus nucleus 59.682
Facial nucleus 29.258
Hypoglossal nucleus 55.016
Ambiguus nucleus 56.172
External cuneate nucleus 33.203
Inferior olivary nucleus 22.287
Raphe obscures nucleus 54.706
Dorsal motor nucleus of vagus 23.477

MEDULLA OBLONGATA - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

97.6
Sample id Sample description nTPM
Area postrema
nTPM: 18.4
2054 Male, age 76, both hemispheres 34.0
2306 Male, age 80, both hemispheres 15.0
2799 Male, age 61, both hemispheres 6.2
Dorsal medullary reticular nucleus
nTPM: 49.1
2088 Male, age 76, both hemispheres 68.3
2040 Female, age 85, both hemispheres 41.1
2373 Male, age 61, both hemispheres 37.9
Dorsal motor vagal complex
nTPM: 43.7
2000 Male, age 74, unknown 59.7
2133 Female, age 91, both hemispheres 55.3
2807 Female, age 85, both hemispheres 50.4
2185 Male, age 76, both hemispheres 45.5
2643 Male, age 74, both hemispheres 38.4
2813 Female, age 72, unknown 37.8
2797 Male, age 61, both hemispheres 31.8
2844 Male, age 55, unknown 30.4
Gigantocellular reticular nuclei, medullary
nTPM: 82.2
2462 Male, age 74, both hemispheres 174.7
2310 Male, age 80, both hemispheres 110.7
2022 Male, age 76, right hemisphere 84.5
2387 Female, age 91, both hemispheres 78.6
1876 Female, age 85, both hemispheres 35.4
2314 Male, age 61, both hemispheres 9.7
Gigantocellular reticular nuclei, pars
nTPM: 97.6
2168 Male, age 76, both hemispheres 140.1
2330 Male, age 80, both hemispheres 132.0
2706 Male, age 80, both hemispheres 126.0
2336 Male, age 61, both hemispheres 52.7
2084 Female, age 85, both hemispheres 37.1
Inferior olive
nTPM: 18.5
2628 Female, age 91, both hemispheres 66.4
2563 Male, age 74, both hemispheres 9.2
2085 Female, age 85, both hemispheres 8.5
2178 Male, age 61, both hemispheres 5.1
2379 Male, age 80, both hemispheres 3.1
Lateral medullary reticular nucleus
nTPM: 22.0
2044 Male, age 76, both hemispheres 53.2
2190 Female, age 85, both hemispheres 25.5
2804 Female, age 91, both hemispheres 20.6
2852 Male, age 80, both hemispheres 14.1
2374 Male, age 61, both hemispheres 12.2
2305 Male, age 74, both hemispheres 6.3
Medial olivary nucleus
nTPM: 17.7
2851 Male, age 80, both hemispheres 47.7
1962 Male, age 76, both hemispheres 11.1
2138 Female, age 91, both hemispheres 8.6
1943 Male, age 61, both hemispheres 3.5
Medial vestibular nucleus
nTPM: 55.8
2134 Male, age 76, both hemispheres 71.1
2093 Male, age 80, both hemispheres 59.7
2624 Male, age 61, both hemispheres 56.4
2801 Male, age 74, both hemispheres 54.4
2803 Female, age 91, both hemispheres 48.5
2743 Female, age 85, both hemispheres 44.5
Motor hypoglossal nucleus
nTPM: 51.4
2461 Male, age 61, both hemispheres 68.2
2132 Female, age 85, both hemispheres 64.0
2125 Female, age 91, both hemispheres 51.4
2182 Male, age 80, both hemispheres 41.4
2277 Male, age 76, both hemispheres 31.9
Nucleus ambiguus
nTPM: 55.3
2096 Female, age 85, both hemispheres 102.8
2071 Male, age 76, both hemispheres 7.8
Nucleus cuneatus
nTPM: 46.3
2131 Male, age 76, both hemispheres 70.3
2100 Male, age 76, both hemispheres 68.4
2805 Female, age 91, both hemispheres 54.3
2562 Male, age 61, both hemispheres 53.9
2381 Male, age 80, both hemispheres 50.6
2808 Female, age 85, both hemispheres 39.5
2564 Male, age 74, both hemispheres 35.2
2376 Male, age 61, both hemispheres 23.4
2380 Male, age 80, both hemispheres 20.7
Nucleus gracilis
nTPM: 22.9
2299 Female, age 85, both hemispheres 27.5
2382 Male, age 80, both hemispheres 22.3
2627 Male, age 74, both hemispheres 18.8
Nucleus raphe obscurus
nTPM: 18.2
2845 Female, age 85, midline 27.6
2800 Male, age 61, midline 21.3
2142 Male, age 76, midline 5.7
Nucleus raphe pallidus
nTPM: 27.9
2145 Male, age 76, midline 37.1
2183 Male, age 80, midline 27.8
1924 Male, age 61, midline 18.8
Nucleus tractus solitarii
nTPM: 39.3
2307 Male, age 80, both hemispheres 46.9
2191 Female, age 85, both hemispheres 42.3
2656 Male, age 76, both hemispheres 38.2
2144 Female, age 91, right hemisphere 29.9
Parvicellular reticular nuclei
nTPM: 95.8
2558 Male, age 74, both hemispheres 206.6
2095 Male, age 76, both hemispheres 51.2
2119 Male, age 80, both hemispheres 29.7
Parvicellular reticular nuclei, medullary
nTPM: 64.7
2181 Male, age 80, left hemisphere 70.4
2189 Female, age 91, both hemispheres 64.6
2091 Female, age 85, both hemispheres 59.2
Peritrigeminal nucleus
nTPM: 37.9
2067 Female, age 85, both hemispheres 41.5
2179 Male, age 61, both hemispheres 40.7
2136 Male, age 76, both hemispheres 31.4
Prepositus hypoglossal nucleus
nTPM: 35.3
2086 Male, age 80, both hemispheres 43.2
2855 Female, age 85, right hemisphere 27.5
Spinal trigeminal nucleus, caudal
nTPM: 64.8
2308 Male, age 80, both hemispheres 69.8
2642 Male, age 74, both hemispheres 68.9
2390 Female, age 91, both hemispheres 66.6
2447 Male, age 76, both hemispheres 65.2
2312 Male, age 61, both hemispheres 53.5
Spinal trigeminal nucleus, interpolar
nTPM: 76.6
2625 Male, age 61, both hemispheres 101.9
2389 Female, age 91, both hemispheres 87.3
2066 Male, age 76, right hemisphere 74.9
2386 Female, age 85, both hemispheres 67.4
2033 Male, age 80, both hemispheres 51.3
Spinal vestibular nucleus
nTPM: 47.0
2796 Male, age 61, both hemispheres 62.8
2780 Male, age 80, both hemispheres 54.0
2186 Female, age 91, both hemispheres 52.8
2748 Male, age 76, both hemispheres 49.1
2806 Female, age 85, both hemispheres 45.3
2384 Male, age 74, both hemispheres 18.1
Superior vestibular nucleus
nTPM: 31.2
2015 Male, age 80, both hemispheres 37.2
2061 Male, age 76, both hemispheres 29.8
2383 Male, age 74, both hemispheres 26.7
Ventral medullary reticular nucleus
nTPM: 30.9
2060 Male, age 76, both hemispheres 51.9
2372 Male, age 61, both hemispheres 9.9
Ventrolateral medulla, A1-C1 cell groups
nTPM: 35.2
2741 Female, age 85, both hemispheres 53.4
1986 Male, age 76, both hemispheres 42.6
2302 Female, age 91, both hemispheres 40.3
2180 Male, age 61, both hemispheres 23.8
2118 Male, age 80, both hemispheres 15.9

MEDULLA OBLONGATA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

25.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Medulla oblongata
Scaled Tags Per Million: 25.9
FF:10155-103A2 76 years, female 46.1
FF:10038-101F2 18-64 years, mixed 20.9
FF:10174-103C3 60 years, female 10.7

MEDULLA OBLONGATA - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

18.5
Pig sample Sample description nTPM
Medulla oblongata
nTPM: 18.5
Samples: 4

Max nTPM: 28.2
Min nTPM: 11.0
Sample A Female 28.2
Sample B Female 20.4
Sample C Male 14.2
Sample D Male 11.0

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