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BRAIN BASAL GANGLIA Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS MEDULLA OBLONGATA
MIDBRAIN OLFACTORY BULB PITUITARY GLAND PONS RETINA SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
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VALIDATION
Brain proteome
Basal ganglia
BASAL GANGLIA - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:533.0 nTPM
HPA Brain:311.9 nTPM
GTEx:533.0 nTPM
FANTOM5:729.5 Scaled Tags Per Million
Pig:285.3 nTPM
Mouse:644.8 nTPM
Allen mouse:9.7 Expression energy

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA047224Antibody HPA058546Antibody CAB008630
Glial cells Not detectedNot detectedLow
Neuronal cells Not detectedNot detectedLow





BASAL GANGLIA - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

311.9
Sample id Sample description nTPM
Caudate nucleus
nTPM: 311.9
2846 Female, age 79, unknown 345.6
2481 Female, age 94, left hemisphere 338.7
1857 Female, age 85, left hemisphere 330.6
2290 Female, age 72, unknown 323.6
1781 Male, age 74, unknown 322.8
1854 Male, age 80, left hemisphere 292.8
2288 Male, age 75, left hemisphere 291.6
2289 Male, age 61, right hemisphere 249.1
Globus pallidus, externus
nTPM: 282.1
2772 Female, age 79, unknown 335.9
1996 Male, age 80, right hemisphere 322.4
2395 Male, age 75, both hemispheres 286.2
2646 Male, age 61, right hemisphere 259.2
2567 Female, age 72, unknown 206.7
Globus pallidus, internus
nTPM: 293.3
2287 Male, age 75, right hemisphere 366.2
2483 Female, age 94, right hemisphere 342.9
1818 Male, age 74, unknown 329.3
2037 Male, age 80, right hemisphere 304.9
2778 Female, age 91, both hemispheres 259.9
2566 Female, age 72, unknown 251.8
2111 Female, age 85, right hemisphere 197.8
Nucleus accumbens
nTPM: 308.1
1856 Female, age 91, right hemisphere 381.6
2698 Female, age 72, unknown 375.4
1783 Male, age 74, unknown 341.2
1806 Female, age 85, left hemisphere 327.8
2286 Male, age 75, left hemisphere 300.5
2824 Male, age 61, right hemisphere 257.0
2391 Female, age 94, left hemisphere 249.6
2732 Male, age 80, right hemisphere 231.7
Nucleus basalis of Meynert
nTPM: 261.3
2821 Male, age 75, both hemispheres 294.2
2484 Female, age 94, left hemisphere 268.4
2569 Male, age 61, both hemispheres 264.4
2393 Male, age 80, right hemisphere 218.0
Nucleus of the diagonal band
nTPM: 299.3
2775 Male, age 80, right hemisphere 343.0
1812 Female, age 91, both hemispheres 322.1
2195 Female, age 85, both hemispheres 321.4
1979 Male, age 74, unknown 284.2
2029 Male, age 61, right hemisphere 225.9
Putamen
nTPM: 285.4
2482 Female, age 94, left hemisphere 345.3
1838 Male, age 80, right hemisphere 316.8
1937 Female, age 91, right hemisphere 300.3
2466 Female, age 79, unknown 289.8
1829 Male, age 74, unknown 264.3
2489 Female, age 72, unknown 249.4
2647 Male, age 75, left hemisphere 231.9
Septal nuclei
nTPM: 265.6
1960 Male, age 74, unknown 321.3
2629 Female, age 94, right hemisphere 281.6
2031 Female, age 72, unknown 279.7
2199 Male, age 80, right hemisphere 263.9
2009 Female, age 91, both hemispheres 259.7
2059 Female, age 85, both hemispheres 244.7
2394 Male, age 61, left hemisphere 208.5
Stria terminalis, bed nucleus
nTPM: 264.4
1974 Female, age 91, both hemispheres 296.7
2201 Male, age 74, unknown 267.2
2486 Female, age 94, both hemispheres 229.2

BASAL GANGLIA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

533.0
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 458.9
Samples: 246

Max nTPM: 970.7
Min nTPM: 194.6
Std nTPM: 117.2
Median nTPM: 442.8
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 970.7
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 898.8
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 893.4
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 798.0
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 783.8
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 753.4
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 752.0
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 748.2
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 741.0
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 733.6
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 706.0
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 690.6
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 687.6
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 658.1
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 647.7
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 644.8
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 644.6
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 633.7
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 630.2
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 622.2
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 615.1
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 609.5
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 606.6
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 603.3
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 588.9
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 587.6
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 587.2
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 586.8
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 582.9
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 577.0
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 575.2
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 573.4
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 571.5
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 569.2
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 567.5
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 566.1
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 565.9
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 565.7
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 561.6
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 559.6
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 558.5
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 557.9
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 556.6
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 554.8
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 554.3
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 554.0
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 553.6
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 552.0
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 551.2
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 549.9
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 542.1
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 538.8
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 529.8
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 528.8
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 528.7
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 525.2
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 524.9
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 523.7
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 523.6
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 522.5
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 513.3
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 506.8
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 506.2
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 506.1
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 503.6
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 501.3
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 499.1
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 499.0
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 498.9
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 497.8
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 497.6
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 492.8
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 492.8
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 491.3
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 491.1
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 491.1
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 490.7
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 487.0
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 486.4
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 485.4
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 484.5
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 484.1
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 484.0
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 483.8
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 483.2
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 482.3
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 480.7
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 479.7
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 478.1
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 477.3
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 474.6
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 474.6
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 471.9
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 471.3
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 469.8
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 469.0
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 466.7
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 462.4
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 462.1
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 461.7
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 461.5
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 460.1
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 459.4
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 456.3
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 455.4
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 454.5
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 454.0
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 453.9
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 452.6
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 451.9
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 451.1
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 451.0
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 450.1
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 448.9
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 448.4
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 447.3
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 446.3
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 445.6
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 444.4
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 444.2
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 444.2
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 443.2
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 443.0
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 442.7
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 442.4
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 441.5
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 440.7
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 438.5
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 437.0
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 435.0
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 434.8
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 434.4
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 434.4
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 433.8
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 433.7
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 433.4
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 432.5
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 426.5
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 426.4
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 426.1
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 424.7
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 424.7
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 423.6
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 423.3
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 421.1
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 419.4
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 418.5
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 417.1
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 417.1
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 416.3
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 416.1
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 415.9
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 415.0
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 414.7
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 413.5
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 412.5
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 411.7
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 411.0
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 410.0
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 409.4
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 409.4
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 407.1
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 405.0
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 403.9
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 403.6
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 402.9
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 402.8
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 402.2
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 400.9
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 397.2
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 396.7
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 396.6
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 395.7
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 395.3
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 394.2
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 393.8
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 393.0
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 392.6
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 392.4
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 391.8
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 389.2
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 387.5
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 386.7
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 386.1
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 385.5
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 384.0
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 383.9
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 383.9
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 383.9
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 382.9
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 382.2
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 382.2
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 381.3
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 379.7
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 378.7
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 377.3
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 376.8
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 372.0
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 369.9
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 369.7
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 366.9
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 364.0
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 363.7
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 361.9
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 361.5
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 360.6
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 360.1
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 359.3
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 358.4
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 354.4
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 352.3
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 351.9
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 348.7
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 348.3
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 346.8
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 346.7
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 345.8
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 344.5
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 343.6
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 339.6
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 330.0
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 328.6
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 327.8
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 326.3
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 326.2
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 319.0
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 317.3
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 317.2
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 315.5
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 312.4
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 308.5
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 307.9
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 305.5
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 302.6
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 301.3
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 292.8
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 284.1
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 284.0
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 280.1
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 276.0
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 261.5
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 261.3
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 251.3
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 246.8
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 196.4
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 194.6
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Brain - Nucleus accumbens (basal ganglia)
Average nTPM: 533.0
Samples: 246

Max nTPM: 1340.7
Min nTPM: 247.7
Std nTPM: 133.2
Median nTPM: 508.8
GTEX-14753-0011-R6b-SM-5S2UD 60-69 years, male 1340.7
GTEX-147F4-0011-R6b-SM-5S2UP 50-59 years, male 1009.6
GTEX-1HUB1-0011-R6b-SM-ARU6W 60-69 years, male 935.1
GTEX-1LVAO-0011-R6b-SM-EZ6MX 60-69 years, male 851.2
GTEX-11NV4-0011-R6a-SM-57WD5 60-69 years, male 829.0
GTEX-1F75A-0011-R6b-SM-9QEHD 50-59 years, male 828.1
GTEX-12WSF-0011-R6b-SM-5HL8W 70-79 years, male 821.0
GTEX-1LB8K-0011-R6a-SM-EXURT 50-59 years, male 781.4
GTEX-12WSH-0011-R6b-SM-5P9F4 50-59 years, male 767.0
GTEX-1J8Q2-0011-R6a-SM-CKZPG 60-69 years, male 758.0
GTEX-1BAJH-0011-R6b-SM-7MXT2 70-79 years, male 756.7
GTEX-12ZZW-0011-R6a-SM-5DUVZ 50-59 years, male 742.1
GTEX-1IGQW-0011-R6a-SM-CM2TC 60-69 years, male 734.3
GTEX-X4XY-0011-R6B-SM-46MVB 60-69 years, male 734.1
GTEX-1EKGG-0011-R6a-SM-CL538 60-69 years, male 731.9
GTEX-17EVQ-0011-R6a-SM-7189U 70-79 years, male 726.2
GTEX-12584-0011-R6a-SM-5NQ7C 40-49 years, male 722.8
GTEX-X585-0011-R6A-SM-46MVJ 50-59 years, male 720.3
GTEX-1JJEA-0011-R6a-SM-EXUS1 60-69 years, male 712.8
GTEX-1R46S-0011-R6a-SM-EZ6N6 60-69 years, female 711.6
GTEX-1AX9I-0011-R6a-SM-7P8PK 60-69 years, male 705.3
GTEX-1I1GR-0011-R6a-SM-CMKHI 60-69 years, male 703.2
GTEX-1H4P4-0011-R6a-SM-ARZLR 50-59 years, male 701.9
GTEX-13FHO-0011-R6b-SM-5LZX1 60-69 years, male 696.1
GTEX-13JVG-0011-R6a-SM-5MR3E 60-69 years, male 692.4
GTEX-13IVO-0011-R6b-SM-5K7X9 70-79 years, male 692.1
GTEX-12WSC-0011-R6b-SM-5LU99 50-59 years, male 691.9
GTEX-1LVA9-0011-R6a-SM-EYYWH 50-59 years, male 690.5
GTEX-13FLV-0011-R6a-SM-5KLZ4 50-59 years, male 681.2
GTEX-144GO-0011-R6b-SM-5S2V7 60-69 years, male 679.2
GTEX-11OF3-0011-R6b-SM-57WBG 60-69 years, male 672.1
GTEX-ZDXO-0011-R6a-SM-4WWCT 60-69 years, male 668.7
GTEX-1HR9M-0011-R6a-SM-ARU6Z 60-69 years, male 667.7
GTEX-1F7RK-0011-R6b-SM-ARZMG 20-29 years, female 664.2
GTEX-14E7W-0011-R6b-SM-5ZZV3 70-79 years, male 661.9
GTEX-1LC47-0011-R6b-SM-EZ6MI 60-69 years, male 659.7
GTEX-1IY9M-0011-R6a-SM-D4P28 60-69 years, male 659.4
GTEX-1F6I4-0011-R6a-SM-CE6R4 60-69 years, male 654.0
GTEX-1GN2E-0011-R6b-SM-9QEII 60-69 years, male 653.3
GTEX-1I1CD-0011-R6b-SM-CJI3Y 60-69 years, female 652.5
GTEX-11DYG-0011-R6a-SM-DO936 60-69 years, male 649.8
GTEX-18A6Q-0011-R6a-SM-7LG6R 60-69 years, male 649.0
GTEX-17MF6-0011-R6b-SM-7LG6G 40-49 years, male 647.8
GTEX-145LU-0011-R6a-SM-5S2V6 50-59 years, male 647.6
GTEX-1MJK2-0011-R6a-SM-EXUS3 50-59 years, male 647.2
GTEX-12ZZZ-0011-R6b-SM-5EQ5B 60-69 years, male 646.6
GTEX-1E1VI-0011-R6a-SM-9OSVJ 50-59 years, male 642.4
GTEX-139TS-0011-R6a-SM-5J2OB 60-69 years, male 641.5
GTEX-1A3MX-0011-R6a-SM-7P8S9 60-69 years, male 638.7
GTEX-1EH9U-0011-R6a-SM-CJI2C 60-69 years, male 637.2
GTEX-1A8G6-0011-R6b-SM-7P8PE 60-69 years, male 633.2
GTEX-139TT-0011-R6b-SM-5J2ON 60-69 years, male 633.1
GTEX-1HBPM-0011-R6b-SM-ARU73 60-69 years, female 632.2
GTEX-16XZZ-0011-R6a-SM-7IGNE 60-69 years, male 628.3
GTEX-1C64N-0011-R6a-SM-7IGO9 50-59 years, male 621.8
GTEX-13112-0011-R6b-SM-5DUVK 50-59 years, male 615.7
GTEX-1RLM8-0011-R6a-SM-EYYXS 50-59 years, male 615.2
GTEX-12ZZX-0011-R6a-SM-5HL8L 40-49 years, female 614.6
GTEX-12ZZY-0011-R6b-SM-5EGLA 60-69 years, male 613.6
GTEX-11DXY-0011-R6a-SM-DNZZF 60-69 years, male 613.2
GTEX-ZVT3-0011-R6a-SM-51MSU 60-69 years, female 610.0
GTEX-X261-0011-R6B-SM-4E3J8 50-59 years, male 607.0
GTEX-13O3O-0011-R6b-SM-5P9GY 60-69 years, female 606.8
GTEX-1EMGI-0011-R6a-SM-9OSVR 60-69 years, male 601.5
GTEX-11TTK-0011-R6b-SM-DNZZW 60-69 years, female 601.2
GTEX-145MH-0011-R6a-SM-5PNZ7 50-59 years, male 600.9
GTEX-1EWIQ-0011-R6a-SM-ARU8G 70-79 years, female 600.7
GTEX-11DZ1-0011-R6b-SM-DNZZG 50-59 years, male 599.7
GTEX-1F75W-0011-R6a-SM-9QEI5 60-69 years, male 599.5
GTEX-1B8L1-0011-R6b-SM-7P8SU 60-69 years, male 598.5
GTEX-ZV68-0011-R6a-SM-51MSR 50-59 years, female 598.3
GTEX-11NUK-0011-R6a-SM-DO93O 50-59 years, male 598.3
GTEX-1GMRU-0011-R6b-SM-A9G3B 50-59 years, male 595.5
GTEX-1IDJH-0011-R6a-SM-A9SLZ 70-79 years, male 594.9
GTEX-13O3Q-0011-R6a-SM-5KM2V 50-59 years, male 593.5
GTEX-1GF9W-0011-R6b-SM-9QEIE 60-69 years, male 590.1
GTEX-11DXW-0011-R6a-SM-DO11N 40-49 years, male 588.8
GTEX-13NYB-0011-R6b-SM-5MR51 40-49 years, male 585.8
GTEX-N7MS-0011-R6a-SM-2HMJ4 60-69 years, male 584.0
GTEX-1C6VR-0011-R6a-SM-7MXU8 60-69 years, male 582.0
GTEX-1EX96-0011-R6a-SM-9OSVV 50-59 years, male 577.4
GTEX-1CB4G-0011-R6b-SM-9QEGO 60-69 years, male 574.0
GTEX-13X6J-0011-R6a-SM-5PNUB 50-59 years, male 573.2
GTEX-145MI-0011-R6a-SM-5PNZA 60-69 years, female 571.7
GTEX-ZE9C-0011-R6a-SM-4WWCW 60-69 years, male 570.3
GTEX-17F97-0011-R6a-SM-7EPGS 50-59 years, male 567.1
GTEX-1GF9V-0011-R6b-SM-CJI2Q 60-69 years, male 565.7
GTEX-1MA7X-0011-R6a-SM-EYYWR 60-69 years, male 565.2
GTEX-1IKK5-0011-R6b-SM-A9SLY 60-69 years, male 563.4
GTEX-14PHW-0011-R6b-SM-5YYAR 60-69 years, female 560.1
GTEX-13FHP-0011-R6b-SM-5LZY6 50-59 years, male 560.0
GTEX-11PRG-0011-R6b-SM-DO923 50-59 years, male 558.2
GTEX-11O72-0011-R6a-SM-DNZZQ 40-49 years, male 557.7
GTEX-11ONC-0011-R6a-SM-DO12A 60-69 years, male 555.1
GTEX-1HBPH-0011-R6a-SM-CKZOV 40-49 years, female 553.1
GTEX-1192X-0011-R6a-SM-DNZZB 50-59 years, male 551.3
GTEX-1B8SF-0011-R6b-SM-7MXUD 60-69 years, male 551.0
GTEX-14PJM-0011-R6a-SM-6872G 50-59 years, female 549.4
GTEX-16Z82-0011-R6a-SM-7IGLV 60-69 years, male 546.4
GTEX-1GZ2Q-0011-R6a-SM-9OSWM 40-49 years, male 545.7
GTEX-1OJC4-0011-R6a-SM-EXOIM 50-59 years, female 543.3
GTEX-13G51-0011-R6b-SM-5LZX4 60-69 years, male 542.9
GTEX-T2IS-0011-R6A-SM-32QP2 20-29 years, female 542.6
GTEX-12WSM-0011-R6b-SM-5EQ6N 60-69 years, male 538.4
GTEX-17JCI-0011-R6a-SM-72D6D 60-69 years, female 537.9
GTEX-1F88E-0011-R6a-SM-CKZNW 60-69 years, female 536.6
GTEX-12WSE-0011-R6b-SM-5LZV5 20-29 years, male 534.9
GTEX-14BIN-0011-R6a-SM-5S2RH 50-59 years, female 532.1
GTEX-13S7M-0011-R6b-SM-5O9D8 60-69 years, female 531.6
GTEX-18464-0011-R6a-SM-731CA 50-59 years, male 531.6
GTEX-15RJE-0011-R6a-SM-7DHL8 40-49 years, male 531.4
GTEX-1313W-0011-R6a-SM-5K7XO 50-59 years, female 531.2
GTEX-1H3VE-0011-R6b-SM-A9G1M 40-49 years, male 531.0
GTEX-1N2DW-0011-R6a-SM-EZ6MW 50-59 years, male 531.0
GTEX-1H3NZ-0011-R6b-SM-A9G1N 60-69 years, male 527.3
GTEX-1HGF4-0011-R6a-SM-A96S1 60-69 years, male 525.7
GTEX-132Q8-0011-R6a-SM-5K7YN 60-69 years, male 521.9
GTEX-1GTWX-0011-R6a-SM-A96RN 60-69 years, male 515.7
GTEX-147GR-0011-R6b-SM-5S2RO 60-69 years, male 514.6
GTEX-1B933-0011-R6b-SM-79OOQ 50-59 years, female 513.2
GTEX-S7PM-0011-R6A-SM-3NM8F 60-69 years, male 512.0
GTEX-1I19N-0011-R6b-SM-CY8GC 70-79 years, male 511.2
GTEX-131XW-0011-R6b-SM-5K7XY 50-59 years, female 509.1
GTEX-11WQC-0011-R6a-SM-5BC77 60-69 years, male 508.5
GTEX-WHSE-0011-R6A-SM-3P5ZP 20-29 years, male 508.0
GTEX-1H3O1-0011-R6b-SM-CL54U 60-69 years, male 507.2
GTEX-13N1W-0011-R6a-SM-5MR43 70-79 years, male 506.5
GTEX-14JG1-0011-R6b-SM-5YYAU 40-49 years, male 505.5
GTEX-ZE7O-0011-R6a-SM-57WCI 50-59 years, female 505.2
GTEX-S7SE-0011-R6A-SM-2XCD9 50-59 years, male 504.4
GTEX-1GMR8-0011-R6b-SM-CE6RC 50-59 years, female 500.1
GTEX-13OW5-0011-R6b-SM-5O9BW 60-69 years, male 500.0
GTEX-1GZ4I-0011-R6b-SM-9WG77 50-59 years, male 497.7
GTEX-1445S-0011-R6b-SM-5PNUF 60-69 years, male 496.3
GTEX-13PL6-0011-R6a-SM-5O9C5 40-49 years, female 495.7
GTEX-UTHO-0011-R6A-SM-3GIJW 60-69 years, male 495.7
GTEX-1ICLZ-0011-R6b-SM-A9G3A 60-69 years, male 495.6
GTEX-ZVZQ-0011-R6b-SM-57WAY 60-69 years, female 495.5
GTEX-13OVL-0011-R6a-SM-5L3G4 50-59 years, male 495.2
GTEX-TSE9-0011-R6A-SM-3DB7L 60-69 years, female 495.0
GTEX-Y8DK-0011-R6A-SM-4V6EG 60-69 years, male 494.3
GTEX-14ASI-0011-R6a-SM-5S2UZ 60-69 years, male 494.1
GTEX-XLM4-0011-R6A-SM-4AT4B 60-69 years, male 494.0
GTEX-1H1CY-0011-R6b-SM-CE6RP 60-69 years, female 493.3
GTEX-1HT8W-0011-R6a-SM-CM2SY 30-39 years, male 491.8
GTEX-11GSP-0011-R6b-SM-57WBQ 60-69 years, female 490.4
GTEX-1J1OQ-0011-R6a-SM-ARU86 40-49 years, female 490.1
GTEX-1E2YA-0011-R6b-SM-CE6R2 50-59 years, male 489.9
GTEX-17HHY-0011-R6b-SM-7189Z 50-59 years, male 489.6
GTEX-1I1GQ-0011-R6b-SM-CE6SE 50-59 years, male 489.4
GTEX-14BMV-0011-R6b-SM-5YY9I 50-59 years, male 486.7
GTEX-1HBPI-0011-R6b-SM-A9G1T 50-59 years, male 486.3
GTEX-15CHQ-0011-R6b-SM-69LOX 60-69 years, male 486.2
GTEX-144GL-0011-R6a-SM-5P9HW 50-59 years, male 485.6
GTEX-QVUS-0011-R6A-SM-3GACX 60-69 years, female 484.8
GTEX-13N2G-0011-R6b-SM-5MR3P 60-69 years, male 484.5
GTEX-1JMLX-0011-R6b-SM-EXUT9 50-59 years, male 482.9
GTEX-N7MT-0011-R6a-SM-2I3G3 60-69 years, female 480.9
GTEX-1I1GS-0011-R6b-SM-CMKHE 60-69 years, male 475.6
GTEX-13SLW-0011-R6a-SM-5O9BH 70-79 years, male 475.2
GTEX-13FLW-0011-R6b-SM-5L3EN 50-59 years, male 474.6
GTEX-Z93S-0011-R6b-SM-4RGNJ 50-59 years, male 474.5
GTEX-WL46-0011-R6A-SM-3LK6X 50-59 years, male 473.3
GTEX-1F75B-0011-R6a-SM-ARZMI 50-59 years, male 473.1
GTEX-17HG3-0011-R6b-SM-79OK8 30-39 years, female 472.6
GTEX-12WSD-0011-R6b-SM-5P9JU 60-69 years, female 471.9
GTEX-15DYW-0011-R6b-SM-6PALA 60-69 years, female 470.4
GTEX-ZXG5-0011-R6a-SM-57WBZ 60-69 years, male 470.4
GTEX-13QJC-0011-R6a-SM-5S2VI 60-69 years, female 468.0
GTEX-18465-0011-R6a-SM-7LG6M 50-59 years, male 466.8
GTEX-13VXU-0011-R6a-SM-5SI71 50-59 years, male 466.2
GTEX-R55E-0011-R6A-SM-2TC5T 20-29 years, male 465.6
GTEX-WZTO-0011-R6B-SM-4E3J6 40-49 years, male 464.7
GTEX-1GN73-0011-R6b-SM-CJI2T 60-69 years, male 464.2
GTEX-1H1ZS-0011-R6b-SM-A9G1F 70-79 years, male 461.7
GTEX-14LZ3-0011-R6a-SM-D3L8C 60-69 years, female 461.4
GTEX-1I1GV-0011-R6b-SM-ARU6Q 60-69 years, male 460.9
GTEX-13NYS-0011-R6b-SM-5MR3R 60-69 years, male 459.4
GTEX-17EVP-0011-R6b-SM-7LT99 40-49 years, male 456.9
GTEX-13OW8-0011-R6b-SM-5L3I3 60-69 years, male 453.8
GTEX-14JIY-0011-R6b-SM-68714 60-69 years, male 452.7
GTEX-15ER7-0011-R6a-SM-6M46M 20-29 years, female 451.5
GTEX-14BIM-0011-R6b-SM-5S2VB 60-69 years, female 450.6
GTEX-14PQA-0011-R6b-SM-6AJAM 50-59 years, female 450.3
GTEX-T6MN-0011-R6A-SM-32QP8 50-59 years, male 450.3
GTEX-1IKOH-0011-R6b-SM-A9G1W 60-69 years, female 450.1
GTEX-1F6IF-0011-R6a-SM-9QEIO 60-69 years, male 450.0
GTEX-145LS-0011-R6b-SM-5PNWL 60-69 years, female 449.9
GTEX-1CB4H-0011-R6b-SM-CKZNK 60-69 years, female 449.3
GTEX-T5JC-0011-R6A-SM-D3L87 20-29 years, male 449.3
GTEX-1GN1U-0011-R6a-SM-CKZNO 50-59 years, female 448.4
GTEX-14C5O-0011-R6a-SM-5YYB6 60-69 years, male 445.9
GTEX-XMD1-0011-R6A-SM-4AT5K 60-69 years, male 438.9
GTEX-NL3H-0011-R6a-SM-2I3G8 60-69 years, male 438.0
GTEX-131XH-0011-R6a-SM-5KM2G 50-59 years, male 436.2
GTEX-1I1HK-0011-R6b-SM-CM2T9 60-69 years, male 434.2
GTEX-WWYW-0011-R6A-SM-3NB3G 50-59 years, female 431.6
GTEX-YJ89-0011-R6a-SM-4V6GN 60-69 years, male 430.3
GTEX-13SLX-0011-R6a-SM-5PNX4 50-59 years, female 429.8
GTEX-1EN7A-0011-R6b-SM-9QEHW 40-49 years, male 427.4
GTEX-13PDP-0011-R6b-SM-5O9D5 60-69 years, male 426.3
GTEX-13OW6-0011-R6b-SM-5L3GR 50-59 years, male 424.2
GTEX-14ABY-0011-R6a-SM-5PNWR 50-59 years, male 423.3
GTEX-1LH75-0011-R6a-SM-EXURS 50-59 years, female 423.2
GTEX-13OVH-0011-R6b-SM-5LUAX 70-79 years, male 422.8
GTEX-1C6WA-0011-R6a-SM-7PBYP 60-69 years, male 421.4
GTEX-1F48J-0011-R6a-SM-CJI2F 50-59 years, female 421.2
GTEX-1IL2U-0011-R6a-SM-ARZLG 60-69 years, male 417.9
GTEX-1HB9E-0011-R6b-SM-A9G1P 50-59 years, male 415.5
GTEX-1GZHY-0011-R6a-SM-9OSWL 50-59 years, female 415.1
GTEX-13FXS-0011-R6b-SM-5L3F7 50-59 years, male 411.8
GTEX-13X6K-0011-R6a-SM-5P9K6 60-69 years, female 410.8
GTEX-1H23P-0011-R6b-SM-A9G1H 60-69 years, male 408.7
GTEX-YFC4-0011-R6b-SM-4V6E1 40-49 years, female 406.6
GTEX-Q2AG-0011-R6A-SM-2HML7 40-49 years, female 400.8
GTEX-X4XX-0011-R6B-SM-46MWP 60-69 years, male 397.8
GTEX-1399T-0011-R6b-SM-5K7YL 60-69 years, male 392.0
GTEX-ZAB4-0011-R6a-SM-4SOKD 40-49 years, male 387.8
GTEX-NPJ7-0011-R6a-SM-2I3G7 60-69 years, female 387.3
GTEX-RU72-0011-R6A-SM-2TF71 50-59 years, female 385.6
GTEX-1CB4J-0011-R6b-SM-9WG7B 60-69 years, male 384.6
GTEX-NL4W-0011-R6a-SM-2I3GA 50-59 years, male 382.9
GTEX-13JUV-0011-R6b-SM-5LZYG 40-49 years, female 382.7
GTEX-16YQH-0011-R6b-SM-7938T 30-39 years, male 378.4
GTEX-WVLH-0011-R6A-SM-3MJFZ 50-59 years, male 378.3
GTEX-15EO6-0011-R6a-SM-7KULK 50-59 years, male 378.1
GTEX-QMR6-0011-R6A-SM-32PKP 50-59 years, male 372.8
GTEX-14PN4-0011-R6b-SM-69LQU 50-59 years, male 371.9
GTEX-13RTJ-0011-R6a-SM-5SI74 60-69 years, male 364.0
GTEX-P44G-0011-R6A-SM-2XCD3 30-39 years, male 362.3
GTEX-ZUA1-0011-R6b-SM-4YCDD 40-49 years, male 360.2
GTEX-1H1DG-0011-R6a-SM-A9SK8 70-79 years, male 358.6
GTEX-1B996-0011-R6b-SM-793AQ 60-69 years, male 352.0
GTEX-183WM-0011-R6b-SM-72D66 70-79 years, female 348.8
GTEX-13OVJ-0011-R6b-SM-5L3GH 50-59 years, female 348.4
GTEX-15DCD-0011-R6b-SM-6M46L 70-79 years, female 347.7
GTEX-1HFI6-0011-R6b-SM-CM2SR 40-49 years, male 333.0
GTEX-ZF28-0011-R6a-SM-4WKHI 60-69 years, male 324.3
GTEX-OHPN-0011-R6A-SM-2I5FH 60-69 years, female 309.3
GTEX-15G19-0011-R6b-SM-7KUM3 60-69 years, male 307.5
GTEX-QVJO-0011-R6A-SM-2S1QN 60-69 years, female 294.9
GTEX-PWO3-0011-R6A-SM-2I5F3 60-69 years, female 270.2
GTEX-X4EP-0011-R6A-SM-3P629 60-69 years, female 265.5
GTEX-P44H-0011-R6A-SM-2XCF3 40-49 years, male 256.2
GTEX-NPJ8-0011-R6a-SM-2HMKB 40-49 years, male 248.6
GTEX-QDT8-0011-R6A-SM-32PKI 30-39 years, female 247.7
Show allShow less
Brain - Putamen (basal ganglia)
Average nTPM: 486.9
Samples: 205

Max nTPM: 856.1
Min nTPM: 272.9
Std nTPM: 109.0
Median nTPM: 477.7
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 856.1
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 855.1
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 793.3
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 773.8
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 750.4
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 746.1
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 743.9
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 743.3
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 736.2
GTEX-S7SE-0011-R7A-SM-2XCDI 50-59 years, male 714.3
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 678.4
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 668.9
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 666.5
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 655.2
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 655.0
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 649.8
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 647.1
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 646.0
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 627.3
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 622.7
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 619.6
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 617.8
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 616.1
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 610.8
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 606.9
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 604.7
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 603.6
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 603.1
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 590.7
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 585.5
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 583.3
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 582.5
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 581.4
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 575.3
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 570.4
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 569.7
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 569.3
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 564.2
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 563.7
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 563.1
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 562.7
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 560.3
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 559.8
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 558.4
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 557.6
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 554.8
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 554.2
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 554.0
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 548.9
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 548.3
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 547.0
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 545.4
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 544.1
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 544.1
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 541.7
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 540.9
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 537.4
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 536.4
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 536.0
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 536.0
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 532.1
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 531.1
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 529.9
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 526.1
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 526.0
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 524.8
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 524.8
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 524.2
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 520.9
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 520.8
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 520.8
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 520.7
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 519.8
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 518.1
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 517.5
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 515.9
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 514.9
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 514.3
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 509.6
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 509.2
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 508.4
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 508.2
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 507.6
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 507.5
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 505.5
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 501.4
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 499.5
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 498.1
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 496.6
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 494.7
GTEX-RU72-0011-R7A-SM-2TF5U 50-59 years, female 491.7
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 491.2
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 490.7
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 487.9
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 487.7
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 487.6
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 487.2
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 486.0
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 485.6
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 484.9
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 483.0
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 481.1
GTEX-1IOXB-0011-R7b-SM-CE6SM 50-59 years, male 477.7
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 477.4
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 476.1
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 474.4
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 472.0
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 471.3
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 470.7
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 470.0
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 469.4
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 469.2
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 467.2
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 466.5
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 465.7
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 464.8
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 461.2
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 461.1
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 461.0
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 459.2
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 458.0
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 457.3
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 452.8
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 451.8
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 450.7
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 449.5
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 447.7
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 446.3
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 443.8
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 443.6
GTEX-P44G-0011-R7A-SM-2I3F9 30-39 years, male 443.6
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 443.3
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 440.9
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 440.8
GTEX-R55E-0011-R7A-SM-2TC5Z 20-29 years, male 440.7
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 439.1
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 438.5
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 437.3
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 437.1
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 436.6
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 433.5
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 430.0
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 428.4
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 427.3
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 426.7
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 425.0
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 424.1
GTEX-N7MS-0011-R7a-SM-2HMKN 60-69 years, male 424.1
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 422.9
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 419.3
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 418.4
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 415.3
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 413.9
GTEX-18464-0011-R7b-SM-731CM 50-59 years, male 413.8
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 413.8
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 408.9
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 407.5
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 406.9
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 406.5
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 406.3
GTEX-NL3H-0011-R7a-SM-2I3G5 60-69 years, male 403.0
GTEX-TSE9-0011-R7A-SM-3DB7P 60-69 years, female 402.4
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 397.2
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 394.9
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 393.3
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 393.1
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 392.8
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 392.5
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 390.9
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 388.6
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 381.1
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 380.3
GTEX-OHPN-0011-R7A-SM-2I5FI 60-69 years, female 379.4
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 378.5
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 377.6
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 373.2
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 370.0
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 368.8
GTEX-1J1OQ-0011-R7b-SM-ARU87 40-49 years, female 367.4
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 366.9
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 366.6
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 361.7
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 361.6
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 361.4
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 352.5
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 344.7
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 343.0
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 340.7
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 340.6
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 339.4
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 339.0
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 334.2
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 330.4
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 316.6
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 315.5
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 314.3
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 312.5
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 309.2
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 308.2
GTEX-QVJO-0011-R7A-SM-2S1QO 60-69 years, female 302.0
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 298.6
GTEX-NPJ8-0011-R7a-SM-2HMJV 40-49 years, male 297.5
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 292.6
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 287.4
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 272.9
Show allShow less

BASAL GANGLIA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

729.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 500.6
FF:10164-103B2 76 years, female 500.6
Nucleus accumbens
Scaled Tags Per Million: 604.9
FF:10037-101F1 23-56 years, mixed 604.9
Putamen
Scaled Tags Per Million: 729.5
FF:10176-103C5 60 years, female 729.5
Globus pallidus
Scaled Tags Per Million: 404.1
FF:10175-103C4 60 years, female 456.7
FF:10161-103A8 76 years, female 351.5

BASAL GANGLIA - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

285.3
Pig sample Sample description nTPM
Caudate
nTPM: 247.3
Samples: 4

Max nTPM: 303.1
Min nTPM: 207.6
Sample A Female 208.8
Sample B Female 269.6
Sample C Male 303.1
Sample D Male 207.6
Putamen
nTPM: 285.3
Samples: 4

Max nTPM: 350.2
Min nTPM: 215.1
Sample A Female 278.3
Sample B Female 215.1
Sample C Male 350.2
Sample D Male 297.6
Septum
nTPM: 249.0
Samples: 4

Max nTPM: 260.8
Min nTPM: 241.0
Sample A Female 250.4
Sample B Female 241.0
Sample C Male 260.8
Sample D Male 243.6
Ventral pallidum
nTPM: 260.1
Samples: 4

Max nTPM: 300.6
Min nTPM: 219.3
Sample A Female 219.3
Sample B Female 300.6
Sample C Male 296.0
Sample D Male 224.4

BASAL GANGLIA - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

644.8
Mouse sample Sample description nTPM
Caudate putamen
nTPM: 644.8
Samples: 4

Max nTPM: 669.8
Min nTPM: 631.6
Sample A Male 640.6
Sample B Male 669.8
Sample C Female 631.6
Sample D Female 637.1
Septum
nTPM: 627.1
Samples: 4

Max nTPM: 685.5
Min nTPM: 560.3
Sample A Male 560.3
Sample B Male 683.0
Sample C Female 685.5
Sample D Female 579.5
Ventral forebrain
nTPM: 633.1
Samples: 4

Max nTPM: 735.0
Min nTPM: 584.8
Sample A Male 623.2
Sample B Male 589.3
Sample C Female 735.0
Sample D Female 584.8

BASAL GANGLIA - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

9.7
Allen experiment id Experiment description Expression energy
Striatum
Expression energy: 7.7
69734572 Antisense, RP_050503_01_B10, Mouse strain C57BL/6J (56 days, male) 7.7
Pallidum
Expression energy: 9.7
69734572 Antisense, RP_050503_01_B10, Mouse strain C57BL/6J (56 days, male) 9.7

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