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BRAIN BASAL GANGLIA Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS MEDULLA OBLONGATA
MIDBRAIN OLFACTORY BULB PITUITARY GLAND PONS RETINA SPINAL CORD THALAMUS WHITE MATTER
PRIMARY MOUSE DATA
ANTIBODIES
AND
VALIDATION
Brain proteome
Basal ganglia
BASAL GANGLIA - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:86.2 nTPM
HPA Brain:130.4 nTPM
GTEx:86.2 nTPM
FANTOM5:281.8 Scaled Tags Per Million
Pig:87.0 nTPM
Mouse:172.9 nTPM
Allen mouse:10.1 Expression energy

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA039176Antibody CAB072836Antibody CAB080075
Glial cells Not detectedNot detectedNot detected
Neuronal cells MediumMediumMedium






BASAL GANGLIA - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

130.4
Sample id Sample description nTPM
Caudate nucleus
nTPM: 84.7
1781 Male, age 74, unknown 99.3
2846 Female, age 79, unknown 91.0
2288 Male, age 75, left hemisphere 90.7
1857 Female, age 85, left hemisphere 89.5
2290 Female, age 72, unknown 88.0
1854 Male, age 80, left hemisphere 80.4
2481 Female, age 94, left hemisphere 70.8
2289 Male, age 61, right hemisphere 67.8
Globus pallidus, externus
nTPM: 64.6
2772 Female, age 79, unknown 84.2
2395 Male, age 75, both hemispheres 67.3
1996 Male, age 80, right hemisphere 58.4
2646 Male, age 61, right hemisphere 57.7
2567 Female, age 72, unknown 55.5
Globus pallidus, internus
nTPM: 65.4
2287 Male, age 75, right hemisphere 82.5
1818 Male, age 74, unknown 76.7
2483 Female, age 94, right hemisphere 64.3
2037 Male, age 80, right hemisphere 62.3
2778 Female, age 91, both hemispheres 62.0
2566 Female, age 72, unknown 58.0
2111 Female, age 85, right hemisphere 52.0
Nucleus accumbens
nTPM: 84.6
1856 Female, age 91, right hemisphere 116.2
1783 Male, age 74, unknown 95.6
1806 Female, age 85, left hemisphere 91.2
2698 Female, age 72, unknown 89.8
2824 Male, age 61, right hemisphere 84.1
2286 Male, age 75, left hemisphere 83.9
2732 Male, age 80, right hemisphere 61.1
2391 Female, age 94, left hemisphere 55.1
Nucleus basalis of Meynert
nTPM: 71.2
2821 Male, age 75, both hemispheres 81.4
2484 Female, age 94, left hemisphere 74.2
2393 Male, age 80, right hemisphere 69.3
2569 Male, age 61, both hemispheres 59.9
Nucleus of the diagonal band
nTPM: 130.4
2775 Male, age 80, right hemisphere 152.4
2029 Male, age 61, right hemisphere 142.5
2195 Female, age 85, both hemispheres 140.6
1812 Female, age 91, both hemispheres 138.5
1979 Male, age 74, unknown 77.7
Putamen
nTPM: 82.4
1937 Female, age 91, right hemisphere 97.3
1838 Male, age 80, right hemisphere 93.1
1829 Male, age 74, unknown 84.6
2466 Female, age 79, unknown 84.3
2647 Male, age 75, left hemisphere 83.1
2482 Female, age 94, left hemisphere 68.7
2489 Female, age 72, unknown 65.8
Septal nuclei
nTPM: 106.3
1960 Male, age 74, unknown 152.6
2031 Female, age 72, unknown 128.1
2629 Female, age 94, right hemisphere 119.9
2009 Female, age 91, both hemispheres 106.7
2059 Female, age 85, both hemispheres 101.3
2394 Male, age 61, left hemisphere 75.1
2199 Male, age 80, right hemisphere 60.3
Stria terminalis, bed nucleus
nTPM: 114.6
1974 Female, age 91, both hemispheres 145.4
2486 Female, age 94, both hemispheres 119.1
2201 Male, age 74, unknown 79.3

BASAL GANGLIA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

86.2
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 74.5
Samples: 246

Max nTPM: 143.9
Min nTPM: 37.0
Std nTPM: 21.6
Median nTPM: 72.7
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 143.9
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 135.8
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 131.0
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 128.2
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 127.9
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 127.2
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 124.3
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 121.4
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 119.2
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 114.5
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 111.7
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 110.9
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 109.7
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 109.5
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 109.0
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 107.3
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 107.3
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 107.2
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 106.9
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 106.8
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 106.5
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 104.3
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 102.5
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 101.1
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 100.8
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 100.7
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 100.6
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 100.5
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 100.2
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 100.1
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 99.4
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 99.3
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 99.0
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 98.6
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 98.6
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 98.3
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 98.1
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 98.0
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 98.0
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 98.0
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 97.7
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 97.5
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 97.5
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 97.3
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 96.9
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 96.1
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 96.0
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 95.6
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 95.6
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 95.5
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 95.0
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 94.9
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 94.0
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 93.7
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 93.5
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 93.3
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 92.3
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 92.2
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 91.3
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 91.3
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 91.1
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 90.9
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 90.8
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 90.0
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 89.4
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 88.8
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 88.7
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 88.5
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 88.1
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 88.0
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 87.6
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 86.6
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 86.5
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 86.4
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 86.2
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 86.0
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 85.8
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 85.1
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 84.7
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 84.3
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 83.2
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 82.9
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 81.8
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 81.7
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 81.7
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 81.3
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 81.0
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 80.9
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 80.6
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 80.5
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 80.2
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 79.4
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 79.2
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 78.9
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 78.9
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 78.8
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 78.2
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 77.9
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 77.8
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 77.3
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 76.6
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 76.2
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 75.8
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 75.5
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 75.5
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 75.4
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 74.9
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 74.9
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 74.8
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 74.7
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 74.4
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 74.3
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 74.2
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 74.1
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 73.9
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 73.7
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 73.6
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 73.6
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 73.3
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 73.2
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 73.0
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 73.0
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 72.7
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 72.7
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 72.4
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 72.3
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 72.1
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 72.0
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 71.6
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 71.4
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 71.1
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 70.5
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 70.5
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 70.4
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 70.3
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 70.2
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 70.2
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 70.0
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 69.5
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 69.4
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 69.4
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 68.2
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 68.0
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 67.8
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 67.4
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 67.2
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 67.1
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 66.6
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 66.4
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 66.4
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 65.9
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 65.8
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 65.5
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 65.2
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 64.6
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 64.2
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 64.2
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 64.2
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 64.0
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 63.9
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 63.6
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 63.6
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 63.3
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 62.5
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 61.7
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 61.4
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 61.2
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 60.8
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 60.5
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 60.2
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 60.0
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 59.6
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 59.6
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 59.1
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 58.9
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 58.9
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 58.7
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 58.6
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 57.9
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 57.8
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 57.7
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 57.5
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 57.4
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 57.2
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 57.1
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 57.1
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 56.9
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 56.8
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 56.8
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 56.3
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 56.3
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 56.2
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 55.7
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 55.3
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 55.2
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 54.7
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 54.2
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 54.2
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 53.8
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 53.8
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 53.8
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 53.5
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 53.3
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 52.4
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 51.5
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 51.5
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 51.0
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 50.8
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 50.6
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 50.3
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 50.3
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 50.2
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 50.0
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 49.6
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 49.2
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 48.8
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 48.7
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 48.5
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 48.4
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 48.3
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 48.2
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 47.6
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 47.5
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 47.4
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 47.1
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 46.6
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 46.2
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 46.2
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 46.1
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 45.9
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 45.1
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 44.3
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 44.2
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 43.3
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 43.0
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 42.5
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 42.3
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 42.2
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 41.6
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 41.6
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 41.2
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 38.8
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 38.7
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 38.2
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 37.2
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 37.0
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Brain - Nucleus accumbens (basal ganglia)
Average nTPM: 86.2
Samples: 246

Max nTPM: 147.0
Min nTPM: 40.6
Std nTPM: 20.7
Median nTPM: 88.2
GTEX-1LVAO-0011-R6b-SM-EZ6MX 60-69 years, male 147.0
GTEX-1J8Q2-0011-R6a-SM-CKZPG 60-69 years, male 144.5
GTEX-1F75A-0011-R6b-SM-9QEHD 50-59 years, male 143.3
GTEX-1AX9I-0011-R6a-SM-7P8PK 60-69 years, male 138.9
GTEX-1I1CD-0011-R6b-SM-CJI3Y 60-69 years, female 133.4
GTEX-13FHO-0011-R6b-SM-5LZX1 60-69 years, male 133.3
GTEX-18464-0011-R6a-SM-731CA 50-59 years, male 126.3
GTEX-1F7RK-0011-R6b-SM-ARZMG 20-29 years, female 121.5
GTEX-1IDJH-0011-R6a-SM-A9SLZ 70-79 years, male 121.3
GTEX-12WSC-0011-R6b-SM-5LU99 50-59 years, male 120.0
GTEX-1F75W-0011-R6a-SM-9QEI5 60-69 years, male 117.8
GTEX-1HUB1-0011-R6b-SM-ARU6W 60-69 years, male 117.8
GTEX-14BIN-0011-R6a-SM-5S2RH 50-59 years, female 117.2
GTEX-1A3MX-0011-R6a-SM-7P8S9 60-69 years, male 116.7
GTEX-17MF6-0011-R6b-SM-7LG6G 40-49 years, male 116.1
GTEX-1313W-0011-R6a-SM-5K7XO 50-59 years, female 115.7
GTEX-N7MS-0011-R6a-SM-2HMJ4 60-69 years, male 115.3
GTEX-18A6Q-0011-R6a-SM-7LG6R 60-69 years, male 114.8
GTEX-13FLV-0011-R6a-SM-5KLZ4 50-59 years, male 114.3
GTEX-1EX96-0011-R6a-SM-9OSVV 50-59 years, male 114.3
GTEX-1ICLZ-0011-R6b-SM-A9G3A 60-69 years, male 113.1
GTEX-1HR9M-0011-R6a-SM-ARU6Z 60-69 years, male 111.8
GTEX-11DXW-0011-R6a-SM-DO11N 40-49 years, male 110.5
GTEX-14E7W-0011-R6b-SM-5ZZV3 70-79 years, male 109.6
GTEX-14PN4-0011-R6b-SM-69LQU 50-59 years, male 109.4
GTEX-15RJE-0011-R6a-SM-7DHL8 40-49 years, male 109.2
GTEX-1F6I4-0011-R6a-SM-CE6R4 60-69 years, male 109.1
GTEX-1F6IF-0011-R6a-SM-9QEIO 60-69 years, male 109.1
GTEX-ZDXO-0011-R6a-SM-4WWCT 60-69 years, male 108.8
GTEX-1MJK2-0011-R6a-SM-EXUS3 50-59 years, male 108.5
GTEX-17F97-0011-R6a-SM-7EPGS 50-59 years, male 108.2
GTEX-1GTWX-0011-R6a-SM-A96RN 60-69 years, male 108.2
GTEX-1GF9V-0011-R6b-SM-CJI2Q 60-69 years, male 107.9
GTEX-13S7M-0011-R6b-SM-5O9D8 60-69 years, female 107.7
GTEX-1I1GR-0011-R6a-SM-CMKHI 60-69 years, male 107.6
GTEX-12WSH-0011-R6b-SM-5P9F4 50-59 years, male 107.2
GTEX-11OF3-0011-R6b-SM-57WBG 60-69 years, male 107.0
GTEX-13O3O-0011-R6b-SM-5P9GY 60-69 years, female 106.6
GTEX-1HBPH-0011-R6a-SM-CKZOV 40-49 years, female 106.5
GTEX-1OJC4-0011-R6a-SM-EXOIM 50-59 years, female 105.9
GTEX-1IKK5-0011-R6b-SM-A9SLY 60-69 years, male 105.8
GTEX-1E1VI-0011-R6a-SM-9OSVJ 50-59 years, male 105.1
GTEX-12WSF-0011-R6b-SM-5HL8W 70-79 years, male 105.0
GTEX-1H1ZS-0011-R6b-SM-A9G1F 70-79 years, male 104.9
GTEX-14PJM-0011-R6a-SM-6872G 50-59 years, female 104.6
GTEX-11NV4-0011-R6a-SM-57WD5 60-69 years, male 104.1
GTEX-X585-0011-R6A-SM-46MVJ 50-59 years, male 103.3
GTEX-1B8L1-0011-R6b-SM-7P8SU 60-69 years, male 103.1
GTEX-1IY9M-0011-R6a-SM-D4P28 60-69 years, male 103.1
GTEX-131XH-0011-R6a-SM-5KM2G 50-59 years, male 103.0
GTEX-13NYB-0011-R6b-SM-5MR51 40-49 years, male 102.7
GTEX-1GN1U-0011-R6a-SM-CKZNO 50-59 years, female 102.4
GTEX-1JMLX-0011-R6b-SM-EXUT9 50-59 years, male 102.2
GTEX-12ZZX-0011-R6a-SM-5HL8L 40-49 years, female 101.4
GTEX-1GZ4I-0011-R6b-SM-9WG77 50-59 years, male 101.2
GTEX-1B933-0011-R6b-SM-79OOQ 50-59 years, female 100.8
GTEX-1GMRU-0011-R6b-SM-A9G3B 50-59 years, male 100.7
GTEX-13O3Q-0011-R6a-SM-5KM2V 50-59 years, male 100.4
GTEX-14JIY-0011-R6b-SM-68714 60-69 years, male 100.4
GTEX-12WSE-0011-R6b-SM-5LZV5 20-29 years, male 100.3
GTEX-13OVL-0011-R6a-SM-5L3G4 50-59 years, male 100.3
GTEX-1GN73-0011-R6b-SM-CJI2T 60-69 years, male 100.2
GTEX-1GF9W-0011-R6b-SM-9QEIE 60-69 years, male 99.8
GTEX-144GO-0011-R6b-SM-5S2V7 60-69 years, male 99.2
GTEX-11DXY-0011-R6a-SM-DNZZF 60-69 years, male 99.2
GTEX-1JJEA-0011-R6a-SM-EXUS1 60-69 years, male 98.9
GTEX-1B8SF-0011-R6b-SM-7MXUD 60-69 years, male 98.7
GTEX-1HT8W-0011-R6a-SM-CM2SY 30-39 years, male 98.5
GTEX-13VXU-0011-R6a-SM-5SI71 50-59 years, male 98.4
GTEX-WZTO-0011-R6B-SM-4E3J6 40-49 years, male 98.1
GTEX-1J1OQ-0011-R6a-SM-ARU86 40-49 years, female 98.1
GTEX-1I1GV-0011-R6b-SM-ARU6Q 60-69 years, male 97.9
GTEX-Q2AG-0011-R6A-SM-2HML7 40-49 years, female 97.7
GTEX-14JG1-0011-R6b-SM-5YYAU 40-49 years, male 97.6
GTEX-12ZZZ-0011-R6b-SM-5EQ5B 60-69 years, male 97.5
GTEX-14BMV-0011-R6b-SM-5YY9I 50-59 years, male 97.2
GTEX-XLM4-0011-R6A-SM-4AT4B 60-69 years, male 96.9
GTEX-TSE9-0011-R6A-SM-3DB7L 60-69 years, female 96.4
GTEX-147GR-0011-R6b-SM-5S2RO 60-69 years, male 96.1
GTEX-13X6J-0011-R6a-SM-5PNUB 50-59 years, male 96.0
GTEX-WHSE-0011-R6A-SM-3P5ZP 20-29 years, male 96.0
GTEX-13G51-0011-R6b-SM-5LZX4 60-69 years, male 95.8
GTEX-1C6VR-0011-R6a-SM-7MXU8 60-69 years, male 95.8
GTEX-145LU-0011-R6a-SM-5S2V6 50-59 years, male 95.6
GTEX-15CHQ-0011-R6b-SM-69LOX 60-69 years, male 95.6
GTEX-145LS-0011-R6b-SM-5PNWL 60-69 years, female 95.5
GTEX-12ZZY-0011-R6b-SM-5EGLA 60-69 years, male 94.9
GTEX-13JVG-0011-R6a-SM-5MR3E 60-69 years, male 94.6
GTEX-14ASI-0011-R6a-SM-5S2UZ 60-69 years, male 94.6
GTEX-1EMGI-0011-R6a-SM-9OSVR 60-69 years, male 93.9
GTEX-1HGF4-0011-R6a-SM-A96S1 60-69 years, male 93.9
GTEX-17HG3-0011-R6b-SM-79OK8 30-39 years, female 93.8
GTEX-13OW6-0011-R6b-SM-5L3GR 50-59 years, male 93.7
GTEX-13NYS-0011-R6b-SM-5MR3R 60-69 years, male 93.4
GTEX-NPJ7-0011-R6a-SM-2I3G7 60-69 years, female 93.2
GTEX-15ER7-0011-R6a-SM-6M46M 20-29 years, female 93.1
GTEX-147F4-0011-R6b-SM-5S2UP 50-59 years, male 92.8
GTEX-1EKGG-0011-R6a-SM-CL538 60-69 years, male 92.7
GTEX-1GZ2Q-0011-R6a-SM-9OSWM 40-49 years, male 92.7
GTEX-S7SE-0011-R6A-SM-2XCD9 50-59 years, male 92.4
GTEX-1CB4G-0011-R6b-SM-9QEGO 60-69 years, male 92.2
GTEX-13112-0011-R6b-SM-5DUVK 50-59 years, male 91.9
GTEX-1H3NZ-0011-R6b-SM-A9G1N 60-69 years, male 91.9
GTEX-12WSD-0011-R6b-SM-5P9JU 60-69 years, female 91.4
GTEX-T2IS-0011-R6A-SM-32QP2 20-29 years, female 91.3
GTEX-1I1GQ-0011-R6b-SM-CE6SE 50-59 years, male 91.2
GTEX-1LH75-0011-R6a-SM-EXURS 50-59 years, female 91.2
GTEX-14ABY-0011-R6a-SM-5PNWR 50-59 years, male 90.9
GTEX-T6MN-0011-R6A-SM-32QP8 50-59 years, male 90.8
GTEX-1HB9E-0011-R6b-SM-A9G1P 50-59 years, male 90.5
GTEX-NL3H-0011-R6a-SM-2I3G8 60-69 years, male 90.4
GTEX-12ZZW-0011-R6a-SM-5DUVZ 50-59 years, male 90.1
GTEX-145MH-0011-R6a-SM-5PNZ7 50-59 years, male 90.1
GTEX-17EVP-0011-R6b-SM-7LT99 40-49 years, male 89.9
GTEX-139TT-0011-R6b-SM-5J2ON 60-69 years, male 89.8
GTEX-15DYW-0011-R6b-SM-6PALA 60-69 years, female 89.7
GTEX-WWYW-0011-R6A-SM-3NB3G 50-59 years, female 89.6
GTEX-1HBPI-0011-R6b-SM-A9G1T 50-59 years, male 89.5
GTEX-13FLW-0011-R6b-SM-5L3EN 50-59 years, male 89.3
GTEX-12WSM-0011-R6b-SM-5EQ6N 60-69 years, male 88.6
GTEX-1MA7X-0011-R6a-SM-EYYWR 60-69 years, male 88.6
GTEX-13N1W-0011-R6a-SM-5MR43 70-79 years, male 88.5
GTEX-QMR6-0011-R6A-SM-32PKP 50-59 years, male 88.5
GTEX-132Q8-0011-R6a-SM-5K7YN 60-69 years, male 87.9
GTEX-13X6K-0011-R6a-SM-5P9K6 60-69 years, female 87.8
GTEX-16YQH-0011-R6b-SM-7938T 30-39 years, male 87.8
GTEX-13N2G-0011-R6b-SM-5MR3P 60-69 years, male 87.2
GTEX-13SLW-0011-R6a-SM-5O9BH 70-79 years, male 87.2
GTEX-13IVO-0011-R6b-SM-5K7X9 70-79 years, male 87.1
GTEX-1C6WA-0011-R6a-SM-7PBYP 60-69 years, male 87.1
GTEX-Z93S-0011-R6b-SM-4RGNJ 50-59 years, male 86.6
GTEX-1H4P4-0011-R6a-SM-ARZLR 50-59 years, male 86.4
GTEX-13JUV-0011-R6b-SM-5LZYG 40-49 years, female 86.2
GTEX-N7MT-0011-R6a-SM-2I3G3 60-69 years, female 85.5
GTEX-11NUK-0011-R6a-SM-DO93O 50-59 years, male 85.5
GTEX-R55E-0011-R6A-SM-2TC5T 20-29 years, male 84.9
GTEX-14PQA-0011-R6b-SM-6AJAM 50-59 years, female 84.7
GTEX-11DZ1-0011-R6b-SM-DNZZG 50-59 years, male 84.7
GTEX-13SLX-0011-R6a-SM-5PNX4 50-59 years, female 84.5
GTEX-14C5O-0011-R6a-SM-5YYB6 60-69 years, male 84.3
GTEX-17EVQ-0011-R6a-SM-7189U 70-79 years, male 84.3
GTEX-ZE9C-0011-R6a-SM-4WWCW 60-69 years, male 84.3
GTEX-13RTJ-0011-R6a-SM-5SI74 60-69 years, male 84.2
GTEX-13QJC-0011-R6a-SM-5S2VI 60-69 years, female 84.1
GTEX-14BIM-0011-R6b-SM-5S2VB 60-69 years, female 84.1
GTEX-1BAJH-0011-R6b-SM-7MXT2 70-79 years, male 83.6
GTEX-144GL-0011-R6a-SM-5P9HW 50-59 years, male 83.5
GTEX-1H1DG-0011-R6a-SM-A9SK8 70-79 years, male 81.7
GTEX-1H1CY-0011-R6b-SM-CE6RP 60-69 years, female 81.4
GTEX-13FHP-0011-R6b-SM-5LZY6 50-59 years, male 80.6
GTEX-11PRG-0011-R6b-SM-DO923 50-59 years, male 80.6
GTEX-18465-0011-R6a-SM-7LG6M 50-59 years, male 80.3
GTEX-WL46-0011-R6A-SM-3LK6X 50-59 years, male 80.1
GTEX-Y8DK-0011-R6A-SM-4V6EG 60-69 years, male 80.0
GTEX-1I1GS-0011-R6b-SM-CMKHE 60-69 years, male 79.7
GTEX-P44G-0011-R6A-SM-2XCD3 30-39 years, male 79.4
GTEX-UTHO-0011-R6A-SM-3GIJW 60-69 years, male 78.6
GTEX-1R46S-0011-R6a-SM-EZ6N6 60-69 years, female 78.6
GTEX-1F88E-0011-R6a-SM-CKZNW 60-69 years, female 78.5
GTEX-NL4W-0011-R6a-SM-2I3GA 50-59 years, male 78.0
GTEX-1LVA9-0011-R6a-SM-EYYWH 50-59 years, male 77.9
GTEX-1GMR8-0011-R6b-SM-CE6RC 50-59 years, female 77.5
GTEX-1399T-0011-R6b-SM-5K7YL 60-69 years, male 77.4
GTEX-17HHY-0011-R6b-SM-7189Z 50-59 years, male 77.1
GTEX-11DYG-0011-R6a-SM-DO936 60-69 years, male 77.0
GTEX-11ONC-0011-R6a-SM-DO12A 60-69 years, male 76.9
GTEX-15DCD-0011-R6b-SM-6M46L 70-79 years, female 76.2
GTEX-1192X-0011-R6a-SM-DNZZB 50-59 years, male 76.2
GTEX-1LB8K-0011-R6a-SM-EXURT 50-59 years, male 76.1
GTEX-1F48J-0011-R6a-SM-CJI2F 50-59 years, female 75.9
GTEX-ZXG5-0011-R6a-SM-57WBZ 60-69 years, male 75.3
GTEX-11WQC-0011-R6a-SM-5BC77 60-69 years, male 75.2
GTEX-14753-0011-R6b-SM-5S2UD 60-69 years, male 75.2
GTEX-ZAB4-0011-R6a-SM-4SOKD 40-49 years, male 75.2
GTEX-1EH9U-0011-R6a-SM-CJI2C 60-69 years, male 74.8
GTEX-1B996-0011-R6b-SM-793AQ 60-69 years, male 74.6
GTEX-1IGQW-0011-R6a-SM-CM2TC 60-69 years, male 74.2
GTEX-13FXS-0011-R6b-SM-5L3F7 50-59 years, male 73.9
GTEX-1GZHY-0011-R6a-SM-9OSWL 50-59 years, female 73.6
GTEX-QVUS-0011-R6A-SM-3GACX 60-69 years, female 72.9
GTEX-1N2DW-0011-R6a-SM-EZ6MW 50-59 years, male 72.8
GTEX-1HBPM-0011-R6b-SM-ARU73 60-69 years, female 72.4
GTEX-RU72-0011-R6A-SM-2TF71 50-59 years, female 72.0
GTEX-1GN2E-0011-R6b-SM-9QEII 60-69 years, male 72.0
GTEX-T5JC-0011-R6A-SM-D3L87 20-29 years, male 72.0
GTEX-X4XX-0011-R6B-SM-46MWP 60-69 years, male 71.7
GTEX-11O72-0011-R6a-SM-DNZZQ 40-49 years, male 70.9
GTEX-QVJO-0011-R6A-SM-2S1QN 60-69 years, female 70.5
GTEX-1RLM8-0011-R6a-SM-EYYXS 50-59 years, male 70.3
GTEX-13OW8-0011-R6b-SM-5L3I3 60-69 years, male 70.1
GTEX-11TTK-0011-R6b-SM-DNZZW 60-69 years, female 70.0
GTEX-YJ89-0011-R6a-SM-4V6GN 60-69 years, male 69.9
GTEX-ZVZQ-0011-R6b-SM-57WAY 60-69 years, female 69.9
GTEX-ZE7O-0011-R6a-SM-57WCI 50-59 years, female 69.7
GTEX-1A8G6-0011-R6b-SM-7P8PE 60-69 years, male 68.7
GTEX-12584-0011-R6a-SM-5NQ7C 40-49 years, male 68.6
GTEX-1I19N-0011-R6b-SM-CY8GC 70-79 years, male 68.6
GTEX-XMD1-0011-R6A-SM-4AT5K 60-69 years, male 68.4
GTEX-X4XY-0011-R6B-SM-46MVB 60-69 years, male 68.3
GTEX-1EWIQ-0011-R6a-SM-ARU8G 70-79 years, female 68.1
GTEX-14LZ3-0011-R6a-SM-D3L8C 60-69 years, female 67.9
GTEX-NPJ8-0011-R6a-SM-2HMKB 40-49 years, male 67.6
GTEX-WVLH-0011-R6A-SM-3MJFZ 50-59 years, male 67.0
GTEX-13OVH-0011-R6b-SM-5LUAX 70-79 years, male 65.1
GTEX-ZV68-0011-R6a-SM-51MSR 50-59 years, female 65.0
GTEX-1C64N-0011-R6a-SM-7IGO9 50-59 years, male 64.5
GTEX-17JCI-0011-R6a-SM-72D6D 60-69 years, female 64.2
GTEX-1I1HK-0011-R6b-SM-CM2T9 60-69 years, male 63.8
GTEX-1LC47-0011-R6b-SM-EZ6MI 60-69 years, male 62.3
GTEX-183WM-0011-R6b-SM-72D66 70-79 years, female 61.9
GTEX-14PHW-0011-R6b-SM-5YYAR 60-69 years, female 61.0
GTEX-11GSP-0011-R6b-SM-57WBQ 60-69 years, female 60.6
GTEX-139TS-0011-R6a-SM-5J2OB 60-69 years, male 60.3
GTEX-YFC4-0011-R6b-SM-4V6E1 40-49 years, female 60.3
GTEX-ZVT3-0011-R6a-SM-51MSU 60-69 years, female 59.1
GTEX-16XZZ-0011-R6a-SM-7IGNE 60-69 years, male 58.7
GTEX-13OVJ-0011-R6b-SM-5L3GH 50-59 years, female 58.6
GTEX-1445S-0011-R6b-SM-5PNUF 60-69 years, male 58.5
GTEX-15EO6-0011-R6a-SM-7KULK 50-59 years, male 58.0
GTEX-X261-0011-R6B-SM-4E3J8 50-59 years, male 58.0
GTEX-1H3VE-0011-R6b-SM-A9G1M 40-49 years, male 57.1
GTEX-13PL6-0011-R6a-SM-5O9C5 40-49 years, female 56.4
GTEX-1E2YA-0011-R6b-SM-CE6R2 50-59 years, male 56.2
GTEX-1H23P-0011-R6b-SM-A9G1H 60-69 years, male 56.0
GTEX-OHPN-0011-R6A-SM-2I5FH 60-69 years, female 55.5
GTEX-1H3O1-0011-R6b-SM-CL54U 60-69 years, male 55.1
GTEX-1IKOH-0011-R6b-SM-A9G1W 60-69 years, female 55.0
GTEX-1IL2U-0011-R6a-SM-ARZLG 60-69 years, male 55.0
GTEX-1EN7A-0011-R6b-SM-9QEHW 40-49 years, male 54.2
GTEX-ZUA1-0011-R6b-SM-4YCDD 40-49 years, male 54.0
GTEX-131XW-0011-R6b-SM-5K7XY 50-59 years, female 53.9
GTEX-1HFI6-0011-R6b-SM-CM2SR 40-49 years, male 53.8
GTEX-16Z82-0011-R6a-SM-7IGLV 60-69 years, male 51.7
GTEX-13OW5-0011-R6b-SM-5O9BW 60-69 years, male 51.1
GTEX-145MI-0011-R6a-SM-5PNZA 60-69 years, female 50.5
GTEX-1CB4H-0011-R6b-SM-CKZNK 60-69 years, female 49.6
GTEX-S7PM-0011-R6A-SM-3NM8F 60-69 years, male 48.5
GTEX-13PDP-0011-R6b-SM-5O9D5 60-69 years, male 47.3
GTEX-X4EP-0011-R6A-SM-3P629 60-69 years, female 47.0
GTEX-PWO3-0011-R6A-SM-2I5F3 60-69 years, female 45.2
GTEX-15G19-0011-R6b-SM-7KUM3 60-69 years, male 44.9
GTEX-1F75B-0011-R6a-SM-ARZMI 50-59 years, male 44.7
GTEX-QDT8-0011-R6A-SM-32PKI 30-39 years, female 44.4
GTEX-1CB4J-0011-R6b-SM-9WG7B 60-69 years, male 43.2
GTEX-P44H-0011-R6A-SM-2XCF3 40-49 years, male 40.9
GTEX-ZF28-0011-R6a-SM-4WKHI 60-69 years, male 40.6
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Brain - Putamen (basal ganglia)
Average nTPM: 78.1
Samples: 205

Max nTPM: 129.9
Min nTPM: 39.1
Std nTPM: 20.6
Median nTPM: 75.6
GTEX-S7SE-0011-R7A-SM-2XCDI 50-59 years, male 129.9
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 127.5
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 125.1
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 121.1
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 120.4
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 118.4
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 117.6
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 117.1
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 116.5
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 115.9
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 113.9
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 113.6
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 112.0
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 108.4
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 108.0
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 108.0
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 107.8
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 107.6
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 107.6
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 107.4
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 107.0
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 106.8
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 106.2
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 105.6
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 105.4
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 105.2
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 104.8
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 104.4
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 103.5
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 103.4
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 103.3
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 102.9
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 102.6
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 102.5
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 102.4
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 102.1
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 101.4
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 100.5
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 100.3
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 100.0
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 99.4
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 98.7
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 98.6
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 98.4
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 97.0
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 97.0
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 96.9
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 96.7
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 95.8
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 95.7
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 94.9
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 94.3
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 93.3
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 92.7
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 92.4
GTEX-P44G-0011-R7A-SM-2I3F9 30-39 years, male 92.4
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 92.3
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 91.4
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 90.6
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 89.7
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 89.5
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 89.1
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 88.3
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 87.7
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 87.6
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 87.3
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 87.3
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 86.1
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 85.1
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 84.8
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 84.5
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 84.5
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 84.0
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 83.4
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 83.2
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 83.1
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 82.8
GTEX-TSE9-0011-R7A-SM-3DB7P 60-69 years, female 82.6
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 82.3
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 82.2
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 82.1
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 81.8
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 81.2
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 81.1
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 80.9
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 80.5
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 80.4
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 80.2
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 80.0
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 79.7
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 78.6
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 78.3
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 78.1
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 77.7
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 77.4
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 77.3
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 77.3
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 76.9
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 75.9
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 75.9
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 75.8
GTEX-N7MS-0011-R7a-SM-2HMKN 60-69 years, male 75.6
GTEX-R55E-0011-R7A-SM-2TC5Z 20-29 years, male 75.6
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 75.6
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 75.4
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 75.4
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 75.3
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 75.2
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 75.1
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 75.0
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 74.8
GTEX-1J1OQ-0011-R7b-SM-ARU87 40-49 years, female 74.4
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 74.4
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 74.4
GTEX-OHPN-0011-R7A-SM-2I5FI 60-69 years, female 74.3
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 74.2
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 73.7
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 73.7
GTEX-1IOXB-0011-R7b-SM-CE6SM 50-59 years, male 73.7
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 73.3
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 73.1
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 73.1
GTEX-QVJO-0011-R7A-SM-2S1QO 60-69 years, female 73.0
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 72.5
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 72.3
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 72.3
GTEX-18464-0011-R7b-SM-731CM 50-59 years, male 71.3
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 71.2
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 70.3
GTEX-RU72-0011-R7A-SM-2TF5U 50-59 years, female 70.1
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 69.0
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 68.6
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 67.0
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 66.9
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 66.6
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 66.4
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 66.4
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 65.7
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 64.6
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 64.3
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 63.7
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 63.5
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 63.4
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 62.9
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 62.4
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 62.2
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 62.2
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 61.8
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 61.8
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 61.6
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 61.6
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 61.5
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 61.1
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 60.9
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 60.8
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 60.8
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 60.7
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 60.5
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 60.3
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 59.8
GTEX-NPJ8-0011-R7a-SM-2HMJV 40-49 years, male 59.5
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 59.5
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 59.1
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 57.9
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 57.7
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 57.6
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 57.2
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 56.3
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 56.1
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 56.1
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 55.9
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 55.8
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 55.4
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 55.2
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 55.2
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 54.8
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 54.7
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 54.4
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 54.2
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 54.1
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 54.0
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 52.6
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 52.2
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 51.8
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 51.7
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 51.7
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 51.7
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 51.6
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 51.3
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 50.8
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 50.8
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 50.5
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 50.0
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 49.8
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 49.4
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 48.9
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 47.6
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 45.7
GTEX-NL3H-0011-R7a-SM-2I3G5 60-69 years, male 45.5
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 44.9
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 44.4
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 44.0
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 42.4
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 40.0
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 39.1
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BASAL GANGLIA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

281.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 146.2
FF:10164-103B2 76 years, female 146.2
Nucleus accumbens
Scaled Tags Per Million: 281.8
FF:10037-101F1 23-56 years, mixed 281.8
Putamen
Scaled Tags Per Million: 204.6
FF:10176-103C5 60 years, female 204.6
Globus pallidus
Scaled Tags Per Million: 118.6
FF:10175-103C4 60 years, female 143.6
FF:10161-103A8 76 years, female 93.6

BASAL GANGLIA - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

87.0
Pig sample Sample description nTPM
Caudate
nTPM: 87.0
Samples: 4

Max nTPM: 103.5
Min nTPM: 73.8
Sample A Female 73.8
Sample B Female 94.8
Sample C Male 103.5
Sample D Male 75.9
Putamen
nTPM: 83.0
Samples: 4

Max nTPM: 105.8
Min nTPM: 60.6
Sample A Female 60.6
Sample B Female 72.2
Sample C Male 105.8
Sample D Male 93.3
Septum
nTPM: 67.9
Samples: 4

Max nTPM: 74.0
Min nTPM: 61.4
Sample A Female 74.0
Sample B Female 70.8
Sample C Male 65.4
Sample D Male 61.4
Ventral pallidum
nTPM: 75.4
Samples: 4

Max nTPM: 82.8
Min nTPM: 70.0
Sample A Female 72.0
Sample B Female 76.9
Sample C Male 82.8
Sample D Male 70.0

BASAL GANGLIA - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

172.9
Mouse sample Sample description nTPM
Caudate putamen
nTPM: 168.2
Samples: 4

Max nTPM: 175.8
Min nTPM: 162.3
Sample A Male 162.3
Sample B Male 175.8
Sample C Female 163.3
Sample D Female 171.5
Septum
nTPM: 166.4
Samples: 4

Max nTPM: 174.2
Min nTPM: 158.7
Sample A Male 174.2
Sample B Male 170.3
Sample C Female 162.4
Sample D Female 158.7
Ventral forebrain
nTPM: 172.9
Samples: 4

Max nTPM: 180.2
Min nTPM: 166.7
Sample A Male 166.7
Sample B Male 173.7
Sample C Female 180.2
Sample D Female 170.9

BASAL GANGLIA - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

10.1
Allen experiment id Experiment description Expression energy
Striatum
Expression energy: 9.4
68080680 Antisense, RP_040929_01_D10, Mouse strain C57BL/6J (56 days, male) 9.4
Pallidum
Expression energy: 10.1
68080680 Antisense, RP_040929_01_D10, Mouse strain C57BL/6J (56 days, male) 10.1

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