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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
FTH1 is not prognostic in Ovary Serous Cystadenocarcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average pTPM
7560.3
Number of samples
349
Samples
Sample
Description
pTPM
TCGA-61-2000-01A
67 years, female, white, stage:Stage IIIC, alive, 441 days
33110.4
TCGA-04-1362-01A
59 years, female, white, stage:Stage IIC, dead, 1348 days
28324.4
TCGA-29-1710-01A
54 years, female, white, stage:Stage IIIC, dead, 951 days
26943.3
TCGA-25-2404-01A
38 years, female, american indian or alaska native, stage:Stage IIIC, dead, 883 days
24623.9
TCGA-29-1711-01A
45 years, female, black or african american, stage:Stage IIIC, alive, 1053 days
23301.7
TCGA-13-1405-01A
49 years, female, white, stage:Stage IV, dead, 868 days
21890.3
TCGA-25-1630-01A
73 years, female, white, stage:Stage IIIC, dead, 1162 days
21362.4
TCGA-24-1842-01A
49 years, female, white, stage:Stage IIIC, alive, 253 days
21219.9
TCGA-29-1694-01A
45 years, female, white, stage:Stage IIIC, dead, 1187 days
21151.3
TCGA-25-1318-01A
54 years, female, white, stage:Stage IIIC, dead, 1064 days
20986.4
TCGA-29-1695-01A
62 years, female, white, stage:Stage IIIC, dead, 1229 days
20889.7
TCGA-25-1313-01A
62 years, female, white, stage:Stage IV, dead, 820 days
20671.1
TCGA-24-1563-01A
66 years, female, black or african american, stage:Stage IIIC, dead, 1451 days
20342.8
TCGA-59-2348-01A
59 years, female, white, stage:Stage IIIC, alive, 5481 days
20298.3
TCGA-23-1120-01A
60 years, female, white, stage:Stage IIIC, alive, 130 days
19599.1
TCGA-24-2298-01A
55 years, female, white, stage:Stage IIIC, dead, 1620 days
19512.7
TCGA-31-1944-01A
47 years, female, white, stage:Stage IIIC, alive, 1386 days
18035.4
TCGA-24-2023-01A
54 years, female, white, stage:Stage IIIA, dead, 1364 days
17431.2
TCGA-29-1761-01A
80 years, female, asian, stage:Stage IIIC, dead, 528 days
16711.3
TCGA-13-0765-01A
50 years, female, white, stage:Stage IIIC, dead, 1389 days
16638.1
TCGA-61-2097-01A
71 years, female, white, stage:Stage IIC, alive, 1844 days
16034.8
TCGA-24-2026-01A
79 years, female, white, stage:Stage IIIC, dead, 1059 days
15913.4
TCGA-61-1914-01A
65 years, female, stage:Stage IIIC, alive, 1722 days
15872.0
TCGA-57-1585-01A
57 years, female, white, stage:Stage IIIC, dead, 53 days
15552.3
TCGA-29-2427-01A
60 years, female, white, stage:Stage IIIC, alive, 1900 days
15479.5
TCGA-29-1705-01A
47 years, female, white, stage:Stage IIIC, dead, 555 days
15079.1
TCGA-29-1785-01A
55 years, female, white, stage:Stage IIIC, dead, 1104 days
14949.5
TCGA-24-2035-01A
65 years, female, white, stage:Stage IIIC, dead, 857 days
14880.1
TCGA-61-1737-01A
42 years, female, white, stage:Stage IV, alive, 1364 days
14861.0
TCGA-13-1483-01A
61 years, female, white, stage:Stage IIIC, dead, 895 days
14814.4
TCGA-09-0367-01A
67 years, female, native hawaiian or other pacific islander, stage:Stage IIIC, dead, 547 days
14536.7
TCGA-24-1847-01A
45 years, female, white, stage:Stage IV, alive, 343 days
14438.9
TCGA-13-0886-01A
67 years, female, white, stage:Stage IIIC, alive, 4665 days
14255.1
TCGA-61-1738-01A
60 years, female, black or african american, stage:Stage IIIC, dead, 1089 days
14155.6
TCGA-24-1928-01A
77 years, female, white, stage:Stage IIIC, dead, 336 days
14154.1
TCGA-24-1104-01A
56 years, female, white, stage:Stage IV, dead, 1933 days
14027.1
TCGA-31-1946-01A
30 years, female, stage:Stage IIIC, alive, 918 days
13604.8
TCGA-23-2084-01A
45 years, female, white, stage:Stage IV, dead, 1516 days
13600.3
TCGA-31-1951-01A
58 years, female, white, stage:Stage IIIC, alive, 684 days
13290.1
TCGA-30-1891-01A
61 years, female, white, stage:Stage IIIC, dead, 914 days
12963.8
TCGA-24-1435-01A
57 years, female, white, stage:Stage IIIC, dead, 1324 days
12959.2
TCGA-24-1603-01A
53 years, female, white, stage:Stage IIIB, dead, 2742 days
12472.5
TCGA-24-2267-01A
58 years, female, white, stage:Stage IIB, dead, 1446 days
12462.5
TCGA-23-1028-01A
43 years, female, white, stage:Stage IIIC, alive, 1503 days
12400.9
TCGA-25-2409-01A
71 years, female, white, stage:Stage IV, dead, 821 days
12312.0
TCGA-30-1718-01A
44 years, female, white, stage:Stage IIIC, dead, 1579 days
12291.4
TCGA-31-1956-01A
60 years, female, white, stage:Stage IIIB, alive, 1342 days
12196.7
TCGA-13-1411-01A
81 years, female, white, stage:Stage IIIC, dead, 531 days
12134.7
TCGA-30-1857-01A
64 years, female, white, stage:Stage IV, dead, 8 days
11976.6
TCGA-13-1506-01A
45 years, female, white, stage:Stage IIIC, dead, 1039 days
11933.8
TCGA-13-0897-01A
54 years, female, white, stage:Stage IIIC, dead, 2182 days
11749.7
TCGA-61-2002-01A
46 years, female, white, stage:Stage IIIC, alive, 547 days
11653.9
TCGA-36-1574-01A
48 years, female, asian, stage:Stage IIIC, alive, 686 days
11579.5
TCGA-13-0720-01A
48 years, female, white, stage:Stage IIIC, dead, 1355 days
11519.6
TCGA-30-1860-01A
58 years, female, white, stage:Stage IIIC, dead, 1366 days
11469.4
TCGA-25-2042-01A
60 years, female, american indian or alaska native, stage:Stage IIIC, dead, 396 days
11454.7
TCGA-24-2288-01A
70 years, female, white, stage:Stage IIIC, dead, 25 days
11417.3
TCGA-29-1781-01A
69 years, female, white, stage:Stage IIIC, alive, 255 days
11311.2
TCGA-20-0987-01A
61 years, female, white, stage:Stage IIIC, dead, 701 days
11167.3
TCGA-29-1770-01A
54 years, female, white, stage:Stage IIIC, alive, 741 days
11133.6
TCGA-24-1417-01A
54 years, female, white, stage:Stage IV, alive, 238 days
11093.5
TCGA-61-1919-01A
58 years, female, white, stage:Stage IIIC, dead, 1161 days
11059.7
TCGA-31-1953-01A
52 years, female, asian, stage:Stage IIIC, alive, 204 days
11049.6
TCGA-24-2293-01A
47 years, female, white, stage:'--, dead, 506 days
10955.4
TCGA-61-1907-01A
63 years, female, white, stage:Stage IIIC, alive, 952 days
10944.0
TCGA-30-1892-01A
52 years, female, white, stage:Stage IIIC, dead, 1484 days
10861.7
TCGA-36-1568-01A
52 years, female, stage:Stage IIIC, alive, 875 days
10834.2
TCGA-31-1959-01A
49 years, female, white, stage:Stage IV, alive, 67 days
10758.4
TCGA-25-2399-01A
80 years, female, white, stage:Stage IIIC, dead, 608 days
10743.1
TCGA-24-1413-01A
51 years, female, white, stage:Stage IIIC, alive, 192 days
10416.3
TCGA-23-2077-01A
45 years, female, white, stage:Stage IIIC, alive, 3525 days
10382.2
TCGA-24-1562-01A
67 years, female, white, stage:Stage IIIC, dead, 1384 days
10175.5
TCGA-09-1662-01A
58 years, female, white, stage:Stage IV, dead, 2717 days
9915.7
TCGA-24-1423-01A
61 years, female, white, stage:Stage IIIC, alive, 190 days
9910.6
TCGA-13-1511-01A
52 years, female, asian, stage:Stage IV, dead, 1650 days
9884.1
TCGA-25-1322-01A
62 years, female, white, stage:Stage IV, dead, 91 days
9835.8
TCGA-24-1604-01A
66 years, female, white, stage:Stage IIIC, dead, 2688 days
9787.4
TCGA-31-1950-01A
76 years, female, white, stage:Stage IIIC, alive, 571 days
9786.1
TCGA-13-0726-01A
55 years, female, white, stage:Stage IIIC, dead, 949 days
9765.2
TCGA-24-1431-01A
67 years, female, white, stage:Stage IIIC, dead, 583 days
9721.8
TCGA-25-2401-01A
64 years, female, white, stage:Stage IIIC, dead, 90 days
9646.8
TCGA-23-1027-01A
48 years, female, white, stage:Stage IIIC, dead, 976 days
9527.6
TCGA-13-1498-01A
73 years, female, white, stage:Stage IIIC, dead, 2012 days
9521.7
TCGA-13-1507-01A
77 years, female, white, stage:Stage IIIC, dead, 1993 days
9508.2
TCGA-61-1728-01A
59 years, female, white, stage:Stage IV, alive, 848 days
9496.7
TCGA-61-1998-01A
48 years, female, white, stage:Stage IIIC, alive, 168 days
9455.9
TCGA-61-2092-01A
57 years, female, white, stage:Stage IIIC, alive, 1573 days
9418.9
TCGA-24-1422-01A
82 years, female, black or african american, stage:Stage IIIC, dead, 23 days
9361.4
TCGA-24-1551-01A
53 years, female, white, stage:Stage IIIC, dead, 1579 days
9342.0
TCGA-61-1995-01A
43 years, female, white, stage:Stage IIIC, alive, 61 days
9248.0
TCGA-24-2289-01A
68 years, female, white, stage:Stage IV, dead, 2049 days
9210.9
TCGA-24-2297-01A
56 years, female, white, stage:Stage IIIC, dead, 1699 days
9038.8
TCGA-23-1109-01A
62 years, female, white, stage:Stage IIIC, dead, 1562 days
9025.3
TCGA-59-2350-01A
44 years, female, stage:Stage IV, dead, 679 days
9004.6
TCGA-24-1434-01A
59 years, female, white, stage:Stage IIIC, dead, 568 days
9003.8
TCGA-36-1576-01A
76 years, female, stage:Stage IIIC, alive, 915 days
8919.8
TCGA-24-2024-01A
72 years, female, black or african american, stage:Stage IIIC, dead, 1769 days
8848.6
TCGA-04-1648-01A
57 years, female, white, stage:Stage IIIC, dead, 871 days
8794.6
TCGA-25-2398-01A
71 years, female, white, stage:Stage IIIC, dead, 1369 days
8759.4
TCGA-61-2104-01A
53 years, female, white, stage:Stage IIC, alive, 2338 days
8740.2
TCGA-61-2008-01A
40 years, female, asian, stage:Stage IIC, alive, 932 days
8736.6
TCGA-09-2051-01A
42 years, female, white, stage:Stage IIIC, alive, 1919 days
8720.3
TCGA-23-1118-01A
45 years, female, white, stage:Stage IIIC, alive, 2616 days
8690.2
TCGA-24-1850-01A
72 years, female, white, stage:Stage IIIC, alive, 168 days
8661.8
TCGA-24-1560-01A
51 years, female, white, stage:Stage IIIC, dead, 1341 days
8650.9
TCGA-13-0911-01A
55 years, female, white, stage:Stage IV, dead, 1355 days
8622.4
TCGA-29-1691-01A
51 years, female, white, stage:Stage IIIC, dead, 1470 days
8569.8
TCGA-61-2109-01A
40 years, female, white, stage:Stage IIIC, dead, 629 days
8537.1
TCGA-61-2012-01A
81 years, female, white, stage:Stage IIC, alive, 932 days
8487.7
TCGA-24-1103-01A
50 years, female, black or african american, stage:Stage IIIC, dead, 1646 days
8351.5
TCGA-09-1666-01A
57 years, female, white, stage:Stage IIIC, alive, 1752 days
8340.1
TCGA-59-2355-01A
58 years, female, white, stage:Stage IV, dead, 65 days
8295.5
TCGA-59-A5PD-01A
55 years, female, black or african american, stage:Stage IC, dead, 624 days
8276.7
TCGA-61-1911-01A
55 years, female, white, stage:Stage IIA, alive, 1293 days
8276.3
TCGA-23-1116-01A
83 years, female, white, stage:Stage IIIC, dead, 592 days
8275.3
TCGA-25-1326-01A
61 years, female, white, stage:Stage IIIC, dead, 1249 days
8246.8
TCGA-13-1487-01A
74 years, female, white, stage:Stage IV, dead, 681 days
8208.7
TCGA-25-1319-01A
73 years, female, white, stage:Stage IIIC, dead, 1977 days
8177.3
TCGA-VG-A8LO-01A
55 years, female, black or african american, stage:Stage IV, dead, 24 days
8163.1
TCGA-25-2400-01A
76 years, female, white, stage:Stage IIIC, dead, 1278 days
8151.9
TCGA-24-2281-01A
68 years, female, white, stage:Stage IIA, alive, 1357 days
8131.3
TCGA-57-1994-01A
63 years, female, white, stage:'--, alive, 761 days
8034.4
TCGA-24-1552-01A
77 years, female, white, stage:Stage IIIC, dead, 1259 days
8026.3
TCGA-24-1546-01A
46 years, female, white, stage:Stage IIIC, dead, 1955 days
7985.2
TCGA-29-1688-01A
39 years, female, white, stage:Stage IIIC, dead, 2400 days
7974.8
TCGA-25-1635-01A
71 years, female, white, stage:Stage IIIC, dead, 1583 days
7944.2
TCGA-61-2003-01A
53 years, female, white, stage:Stage IIIC, alive, 122 days
7883.2
TCGA-61-2009-01A
65 years, female, white, stage:Stage IIIC, alive, 1212 days
7882.2
TCGA-61-2113-01A
53 years, female, white, stage:Stage IIC, dead, 676 days
7850.8
TCGA-24-1428-01A
50 years, female, white, stage:Stage IIIC, alive, 529 days
7816.7
TCGA-24-1557-01A
49 years, female, white, stage:Stage IIIC, dead, 1213 days
7792.8
TCGA-24-1616-01A
56 years, female, white, stage:Stage IIIC, dead, 1163 days
7779.9
TCGA-25-1627-01A
73 years, female, white, stage:Stage IIIC, dead, 394 days
7724.2
TCGA-13-1495-01A
60 years, female, white, stage:Stage IIIC, dead, 2749 days
7720.5
TCGA-36-1569-01A
52 years, female, white, stage:Stage IIIC, alive, 885 days
7677.1
TCGA-57-1582-01A
50 years, female, white, stage:Stage IIIC, dead, 731 days
7664.7
TCGA-24-1845-01A
42 years, female, white, stage:Stage IIIC, alive, 116 days
7572.6
TCGA-13-0797-01A
49 years, female, white, stage:Stage IIIC, alive, 2121 days
7563.5
TCGA-57-1993-01A
56 years, female, white, stage:Stage IIIC, alive, 763 days
7538.6
TCGA-24-1844-01A
64 years, female, white, stage:Stage IIIC, alive, 113 days
7467.0
TCGA-61-1900-01A
51 years, female, black or african american, stage:Stage IIIB, alive, 176 days
7369.5
TCGA-13-1489-01A
70 years, female, white, stage:Stage IIIC, dead, 2553 days
7347.5
TCGA-24-1416-01A
34 years, female, white, stage:Stage IV, alive, 194 days
7338.5
TCGA-24-1105-01A
36 years, female, white, stage:Stage IIIC, dead, 1442 days
7337.0
TCGA-24-1558-01A
73 years, female, white, stage:Stage IIIC, dead, 594 days
7304.2
TCGA-61-2111-01A
61 years, female, white, stage:Stage IV, alive, 3825 days
7285.3
TCGA-29-1777-01A
47 years, female, white, stage:Stage IIIC, alive, 374 days
7264.1
TCGA-24-2038-01A
68 years, female, white, stage:Stage IIIA, dead, 1354 days
7262.7
TCGA-24-0979-01A
53 years, female, white, stage:Stage IV, dead, 1264 days
7258.5
TCGA-24-0968-01A
59 years, female, white, stage:Stage IIIC, dead, 598 days
7229.9
TCGA-59-2352-01A
78 years, female, white, stage:Stage IIIC, dead, 286 days
7225.9
TCGA-24-1474-01A
57 years, female, black or african american, stage:Stage IIIC, dead, 676 days
7092.4
TCGA-20-0991-01A
78 years, female, white, stage:Stage IIB, alive, 797 days
7073.0
TCGA-24-2254-01A
66 years, female, white, stage:Stage IIIC, dead, 1736 days
7023.5
TCGA-13-1410-01A
57 years, female, white, stage:Stage IV, alive, 2464 days
6960.8
TCGA-29-1776-01A
63 years, female, black or african american, stage:Stage IIIC, alive, 360 days
6941.0
TCGA-24-2261-01A
76 years, female, white, stage:Stage IIIC, dead, 24 days
6923.5
TCGA-24-1846-01A
45 years, female, stage:Stage IIIC, alive, 133 days
6868.5
TCGA-29-1784-01A
55 years, female, white, stage:Stage IIIC, alive, 163 days
6846.6
TCGA-61-2101-01A
55 years, female, white, stage:Stage IIIC, dead, 1688 days
6802.6
TCGA-20-1682-01A
56 years, female, white, stage:Stage IIIC, alive, 837 days
6785.1
TCGA-59-2354-01A
63 years, female, white, stage:Stage IIIC, dead, 1046 days
6751.9
TCGA-13-0924-01A
45 years, female, white, stage:Stage IV, alive, 2614 days
6751.6
TCGA-36-1580-01A
82 years, female, stage:Stage IIIC, dead, 737 days
6727.1
TCGA-13-1404-01A
48 years, female, white, stage:Stage IIIC, alive, 2469 days
6659.8
TCGA-29-1762-01A
59 years, female, white, stage:Stage IV, dead, 2634 days
6648.9
TCGA-24-1427-01A
58 years, female, stage:Stage IIIC, alive, 147 days
6640.1
TCGA-61-1724-01A
47 years, female, white, stage:Stage IIIC, dead, 637 days
6615.7
TCGA-24-2290-01A
56 years, female, white, stage:Stage IIIC, dead, 1102 days
6565.0
TCGA-59-2363-01A
40 years, female, asian, stage:Stage IIIA, alive, 165 days
6506.2
TCGA-29-1693-01A
72 years, female, white, stage:Stage IIIC, alive, 3096 days
6477.5
TCGA-24-1924-01A
65 years, female, white, stage:Stage IIIC, dead, 919 days
6468.0
TCGA-25-1632-01A
68 years, female, white, stage:Stage IV, dead, 1799 days
6449.2
TCGA-24-1549-01A
58 years, female, white, stage:Stage IIIB, dead, 1721 days
6444.6
TCGA-04-1651-01A
53 years, female, white, stage:Stage IIIC, dead, 1102 days
6435.3
TCGA-25-1317-01A
66 years, female, white, stage:Stage IIIC, dead, 61 days
6434.6
TCGA-29-1690-01A
66 years, female, white, stage:Stage IIIC, dead, 1448 days
6426.1
TCGA-36-1570-01A
49 years, female, white, stage:Stage IIIC, alive, 655 days
6340.8
TCGA-23-1809-01A
63 years, female, white, stage:Stage IIC, alive, 16 days
6326.8
TCGA-25-1320-01A
65 years, female, white, stage:Stage IIIC, dead, 1155 days
6315.1
TCGA-30-1866-01A
61 years, female, white, stage:Stage IV, dead, 1114 days
6298.7
TCGA-24-1930-01A
53 years, female, white, stage:Stage IIIC, dead, 2467 days
6261.5
TCGA-24-2027-01A
51 years, female, white, stage:Stage IV, dead, 3337 days
6252.2
TCGA-20-1683-01A
65 years, female, white, stage:Stage IIIC, alive, 772 days
6199.4
TCGA-25-2396-01A
71 years, female, white, stage:Stage IIIC, dead, 92 days
6174.6
TCGA-61-1910-01A
56 years, female, white, stage:Stage IIC, alive, 1127 days
6164.1
TCGA-24-1425-01A
45 years, female, white, stage:Stage IIIC, alive, 181 days
6161.3
TCGA-24-1469-01A
71 years, female, white, stage:Stage IIIC, alive, 277 days
6129.0
TCGA-59-2351-01A
51 years, female, white, stage:Stage IIIC, alive, 3532 days
6126.7
TCGA-36-1581-01A
63 years, female, white, stage:Stage IIC, alive, 751 days
6120.1
TCGA-04-1365-01A
87 years, female, white, stage:Stage IIIB, alive, 947 days
6102.4
TCGA-29-1697-01A
62 years, female, white, stage:Stage IIIC, dead, 949 days
6076.2
TCGA-04-1356-01A
62 years, female, white, stage:Stage IIC, dead, 1499 days
6008.0
TCGA-24-1467-01A
51 years, female, white, stage:Stage IIIC, dead, 3224 days
5986.5
TCGA-09-1673-01A
50 years, female, white, stage:Stage IV, alive, 92 days
5912.1
TCGA-25-1312-01A
69 years, female, white, stage:Stage IV, dead, 31 days
5908.7
TCGA-24-1550-01A
49 years, female, white, stage:Stage IIIC, dead, 1249 days
5889.4
TCGA-25-1321-01A
65 years, female, white, stage:Stage IIIC, dead, 1033 days
5857.6
TCGA-24-1418-01A
68 years, female, white, stage:Stage IIIC, alive, 243 days
5848.2
TCGA-24-1426-01A
43 years, female, white, stage:Stage IIIC, alive, 163 days
5782.6
TCGA-13-1510-01A
62 years, female, white, stage:Stage IIIC, dead, 1359 days
5754.9
TCGA-13-0887-01A
42 years, female, white, stage:Stage IIIC, dead, 2028 days
5730.1
TCGA-24-2020-01A
67 years, female, white, stage:Stage IIIC, dead, 4624 days
5702.9
TCGA-36-1571-01A
53 years, female, white, stage:Stage IIIB, dead, 695 days
5673.7
TCGA-13-0883-01A
61 years, female, white, stage:Stage IIIC, dead, 2097 days
5645.4
TCGA-23-1030-01A
64 years, female, white, stage:Stage IIIC, alive, 886 days
5592.4
TCGA-29-A5NZ-01A
66 years, female, black or african american, stage:Stage IIIC, dead, 1088 days
5562.3
TCGA-25-1626-01A
65 years, female, white, stage:Stage IIIC, dead, 518 days
5487.7
TCGA-13-1497-01A
47 years, female, white, stage:Stage IIIC, alive, 3871 days
5456.7
TCGA-30-1862-01A
65 years, female, white, stage:Stage IV, dead, 186 days
5441.1
TCGA-24-0966-01A
78 years, female, black or african american, stage:Stage IIIC, alive, 232 days
5432.7
TCGA-24-1843-01A
66 years, female, white, stage:Stage IIIC, alive, 106 days
5396.6
TCGA-13-0795-01A
66 years, female, white, stage:Stage IIIC, dead, 619 days
5328.8
TCGA-09-2045-01A
50 years, female, asian, stage:Stage IV, dead, 1069 days
5303.3
TCGA-29-1701-01A
56 years, female, white, stage:Stage IIIC, dead, 515 days
5294.0
TCGA-13-0906-01A
50 years, female, white, stage:Stage IIIC, alive, 3619 days
5245.8
TCGA-13-1408-01A
59 years, female, white, stage:Stage IIIC, dead, 1680 days
5210.8
TCGA-29-1768-01A
50 years, female, white, stage:Stage IV, dead, 952 days
5193.3
TCGA-25-1315-01A
50 years, female, white, stage:Stage IIIC, dead, 1583 days
5191.0
TCGA-24-1430-01A
68 years, female, white, stage:Stage IIIC, dead, 863 days
5121.8
TCGA-24-1419-01A
62 years, female, white, stage:Stage IIIC, alive, 239 days
5063.3
TCGA-57-1584-01A
47 years, female, white, stage:Stage IIIC, alive, 643 days
5025.4
TCGA-29-2428-01A
58 years, female, white, stage:Stage IIIC, alive, 1372 days
4989.8
TCGA-25-2392-01A
75 years, female, white, stage:Stage IV, dead, 31 days
4932.4
TCGA-13-1403-01A
48 years, female, white, stage:Stage IIIC, dead, 2345 days
4929.3
TCGA-13-0923-01A
74 years, female, white, stage:Stage IIIC, alive, 2547 days
4911.9
TCGA-04-1519-01A
48 years, female, stage:Stage IIIC, alive, 24 days
4892.6
TCGA-23-1122-01A
53 years, female, white, stage:Stage IIIC, dead, 1189 days
4886.2
TCGA-24-1553-01A
53 years, female, white, stage:Stage IIIB, dead, 1767 days
4884.3
TCGA-61-1733-01A
71 years, female, white, stage:Stage IIIC, alive, 967 days
4884.0
TCGA-13-0885-01A
70 years, female, white, stage:Stage IIIC, alive, 3388 days
4823.2
TCGA-23-1111-01A
63 years, female, white, stage:Stage IIIC, alive, 98 days
4766.9
TCGA-13-0766-01A
42 years, female, white, stage:Stage IIIC, dead, 1725 days
4763.0
TCGA-13-0768-01A
73 years, female, white, stage:Stage IIIC, dead, 1784 days
4753.8
TCGA-61-2098-01A
62 years, female, white, stage:Stage IIIC, alive, 1993 days
4744.8
TCGA-04-1530-01A
68 years, female, white, stage:Stage IIIC, dead, 3622 days
4729.2
TCGA-13-1485-01A
48 years, female, white, stage:Stage IV, dead, 629 days
4718.4
TCGA-29-2414-01A
75 years, female, white, stage:Stage IIIC, dead, 2621 days
4711.0
TCGA-04-1361-01A
57 years, female, white, stage:Stage IIIB, alive, 989 days
4707.9
TCGA-61-1918-01A
45 years, female, white, stage:Stage IV, dead, 479 days
4631.0
TCGA-04-1542-01A
52 years, female, white, stage:Stage IIIB, dead, 2561 days
4611.0
TCGA-04-1331-01A
78 years, female, white, stage:Stage IIIC, dead, 1336 days
4587.5
TCGA-20-1687-01A
46 years, female, white, stage:Stage IV, alive, 81 days
4570.2
TCGA-23-1107-01A
59 years, female, white, stage:Stage IV, dead, 9 days
4552.6
TCGA-24-1424-01A
67 years, female, white, stage:Stage IIIC, alive, 183 days
4550.6
TCGA-24-2033-01A
87 years, female, white, stage:Stage IIIC, dead, 562 days
4538.0
TCGA-13-0804-01A
73 years, female, white, stage:Stage IIIC, dead, 1073 days
4510.7
TCGA-23-1123-01A
59 years, female, white, stage:Stage IIIC, dead, 1018 days
4501.4
TCGA-09-1669-01A
54 years, female, white, stage:Stage IIIA, alive, 928 days
4482.6
TCGA-25-1623-01A
71 years, female, white, stage:Stage IV, dead, 565 days
4448.8
TCGA-10-0937-01A
44 years, female, white, stage:Stage IIIC, dead, 608 days
4448.3
TCGA-61-1721-01A
38 years, female, white, stage:Stage IV, alive, 338 days
4440.0
TCGA-13-0916-01A
49 years, female, white, stage:Stage IIIC, alive, 1785 days
4428.4
TCGA-61-2110-01A
56 years, female, white, stage:Stage IIIC, dead, 1354 days
4411.0
TCGA-13-0888-01A
78 years, female, white, stage:Stage IIIC, dead, 2811 days
4377.4
TCGA-09-1670-01A
57 years, female, white, stage:Stage IIIA, alive, 547 days
4371.3
TCGA-25-1870-01A
59 years, female, white, stage:Stage IIIC, dead, 455 days
4332.9
TCGA-29-2425-01A
60 years, female, white, stage:Stage IIIC, alive, 1977 days
4313.2
TCGA-13-1492-01A
66 years, female, white, stage:Stage IIIC, dead, 3819 days
4303.5
TCGA-25-1633-01A
64 years, female, white, stage:Stage IIIC, dead, 1891 days
4301.6
TCGA-29-1783-01A
58 years, female, white, stage:Stage IIIC, alive, 220 days
4271.1
TCGA-04-1341-01A
85 years, female, white, stage:'--, alive, 33 days
4240.2
TCGA-25-1634-01A
75 years, female, white, stage:Stage IIIC, dead, 1091 days
4229.1
TCGA-24-2271-01A
55 years, female, asian, stage:Stage IIIC, dead, 962 days
4226.7
TCGA-24-1567-01A
54 years, female, white, stage:Stage IIIB, dead, 524 days
4219.4
TCGA-29-1769-01A
40 years, female, white, stage:Stage IIIC, alive, 699 days
4209.2
TCGA-25-1328-01A
38 years, female, white, stage:Stage IIIC, dead, 2009 days
4133.3
TCGA-25-1316-01A
55 years, female, white, stage:Stage IIIC, dead, 1279 days
4111.0
TCGA-24-2036-01A
50 years, female, white, stage:Stage IIIA, dead, 1947 days
4096.9
TCGA-25-1628-01A
67 years, female, white, stage:Stage IIIC, dead, 627 days
4089.2
TCGA-57-1583-01A
57 years, female, black or african american, stage:Stage IIIC, dead, 346 days
3992.6
TCGA-24-1544-01A
71 years, female, black or african american, stage:Stage IIIC, dead, 820 days
3971.3
TCGA-13-A5FT-01A
67 years, female, black or african american, stage:Stage IIIC, alive, 2143 days
3902.1
TCGA-09-0366-01A
55 years, female, white, stage:Stage IIIC, dead, 1757 days
3876.0
TCGA-09-0369-01A
56 years, female, white, stage:Stage IIIC, dead, 1082 days
3856.8
TCGA-29-1778-01A
77 years, female, white, stage:Stage IIIC, alive, 454 days
3821.6
TCGA-13-0725-01A
44 years, female, white, stage:Stage IIIC, dead, 377 days
3803.9
TCGA-13-1488-01A
59 years, female, white, stage:Stage IV, dead, 2154 days
3795.5
TCGA-13-0714-01A
55 years, female, white, stage:Stage IV, dead, 189 days
3741.0
TCGA-04-1332-01A
70 years, female, white, stage:Stage IIIC, dead, 1247 days
3723.5
TCGA-25-2393-01A
81 years, female, white, stage:Stage IIIC, dead, 1157 days
3719.5
TCGA-25-1329-01A
76 years, female, white, stage:Stage IIIC, dead, 457 days
3701.6
TCGA-29-1703-01A
56 years, female, black or african american, stage:Stage IIIC, dead, 1815 days
3690.7
TCGA-29-1763-01A
43 years, female, black or african american, stage:Stage IIC, alive, 2032 days
3681.5
TCGA-30-1861-01A
74 years, female, white, stage:Stage IIIC, dead, 1058 days
3656.2
TCGA-04-1655-01A
49 years, female, white, stage:Stage IIIB, dead, 1380 days
3646.7
TCGA-23-2078-01A
66 years, female, white, stage:Stage IIIC, alive, 2661 days
3634.8
TCGA-25-1631-01A
73 years, female, white, stage:Stage IIIC, dead, 9 days
3612.4
TCGA-13-1501-01A
50 years, female, white, stage:Stage IV, dead, 1314 days
3595.9
TCGA-04-1536-01A
60 years, female, black or african american, stage:Stage IV, dead, 885 days
3592.0
TCGA-13-0891-01A
73 years, female, white, stage:Stage IV, dead, 3128 days
3585.0
TCGA-24-2280-01A
74 years, female, white, stage:Stage IIIC, alive, 2143 days
3539.2
TCGA-29-1696-01A
43 years, female, white, stage:Stage IIIC, dead, 1032 days
3504.7
TCGA-29-1766-01A
74 years, female, white, stage:Stage IIIC, dead, 1199 days
3504.6
TCGA-57-1586-01A
66 years, female, white, stage:Stage IIIC, alive, 679 days
3439.6
TCGA-29-1774-01A
82 years, female, white, stage:Stage IIIC, alive, 527 days
3402.6
TCGA-61-2088-01A
51 years, female, white, stage:Stage IIIC, alive, 145 days
3393.3
TCGA-04-1350-01A
46 years, female, white, stage:Stage IIIC, dead, 1946 days
3375.7
TCGA-09-2054-01A
58 years, female, black or african american, stage:Stage IIIC, dead, 637 days
3366.2
TCGA-24-1471-01A
60 years, female, white, stage:Stage IIIC, alive, 36 days
3323.3
TCGA-61-2102-01A
74 years, female, white, stage:Stage IIIC, dead, 197 days
3298.3
TCGA-13-1512-01A
49 years, female, white, stage:Stage IIIC, alive, 442 days
3291.5
TCGA-23-1119-01A
64 years, female, white, stage:Stage IIIC, alive, 3953 days
3254.9
TCGA-23-1023-01A
65 years, female, white, stage:Stage IIIC, alive, 1233 days
3243.6
TCGA-25-1323-01A
72 years, female, white, stage:Stage IIIC, dead, 395 days
3234.0
TCGA-13-1505-01A
63 years, female, white, stage:Stage IIIC, alive, 1998 days
3232.9
TCGA-61-1725-01A
40 years, female, white, stage:Stage IIIC, alive, 956 days
3075.7
TCGA-13-0730-01A
71 years, female, white, stage:Stage IIIC, dead, 542 days
3012.8
TCGA-24-1565-01A
74 years, female, white, stage:Stage IIIC, dead, 312 days
2936.5
TCGA-25-1877-01A
81 years, female, white, stage:Stage IIIC, dead, 730 days
2816.3
TCGA-13-0920-01A
65 years, female, white, stage:Stage IIIC, dead, 1484 days
2774.8
TCGA-13-1499-01A
56 years, female, white, stage:Stage IIIC, alive, 3500 days
2760.0
TCGA-13-0727-01A
71 years, female, white, stage:Stage IIIC, dead, 462 days
2754.4
TCGA-13-2060-01A
51 years, female, white, stage:Stage IV, alive, 2369 days
2744.5
TCGA-04-1364-01A
61 years, female, white, stage:Stage IIIC, dead, 1024 days
2723.8
TCGA-13-1477-01A
49 years, female, white, stage:Stage IV, dead, 1662 days
2702.6
TCGA-36-1577-01A
43 years, female, asian, stage:Stage IIC, alive, 783 days
2693.3
TCGA-23-1110-01A
42 years, female, white, stage:Stage IIIC, alive, 1658 days
2690.9
TCGA-13-1509-01A
64 years, female, white, stage:Stage IV, alive, 2438 days
2667.9
TCGA-10-0931-01A
44 years, female, white, stage:Stage IIIC, dead, 1000 days
2654.9
TCGA-04-1338-01A
78 years, female, white, stage:Stage IIIC, alive, 1418 days
2651.7
TCGA-30-1853-01A
58 years, female, white, stage:Stage IIIC, dead, 1103 days
2635.4
TCGA-09-2048-01A
63 years, female, white, stage:Stage IIIC, dead, 138 days
2632.1
TCGA-61-1741-01A
76 years, female, white, stage:Stage IIIB, dead, 1024 days
2630.1
TCGA-10-0928-01A
71 years, female, white, stage:Stage IIIC, dead, 563 days
2571.9
TCGA-5X-AA5U-01A
61 years, female, black or african american, stage:Stage IIC, alive, 361 days
2533.5
TCGA-24-0982-01A
77 years, female, white, stage:Stage IIIC, dead, 679 days
2516.2
TCGA-23-1022-01A
67 years, female, white, stage:Stage IIIC, dead, 1511 days
2474.0
TCGA-13-0800-01A
52 years, female, white, stage:Stage IIIC, alive, 2661 days
2429.8
TCGA-04-1343-01A
72 years, female, white, stage:Stage IV, dead, 361 days
2403.2
TCGA-23-1113-01A
48 years, female, white, stage:Stage IV, dead, 949 days
2387.6
TCGA-13-1496-01A
65 years, female, white, stage:Stage IIIC, dead, 129 days
2375.7
TCGA-24-1923-01A
51 years, female, white, stage:Stage IIIC, dead, 690 days
2369.9
TCGA-24-1464-01A
70 years, female, white, stage:Stage IIIC, dead, 379 days
2349.1
TCGA-04-1514-01A
45 years, female, white, stage:Stage IIIA, dead, 1720 days
2324.1
TCGA-OY-A56Q-01A
78 years, female, black or african american, stage:Stage IIA, alive, 576 days
2314.9
TCGA-13-1407-01A
51 years, female, white, stage:Stage IIIC, alive, 2534 days
2103.6
TCGA-13-1409-01A
73 years, female, white, stage:Stage IIIC, dead, 1742 days
2087.4
TCGA-13-0724-01A
72 years, female, white, stage:Stage IV, dead, 83 days
1952.5
TCGA-09-0364-01A
80 years, female, white, stage:Stage IIC, dead, 887 days
1857.0
TCGA-10-0927-01A
65 years, female, stage:Stage IIIC, dead, 2490 days
1765.0
TCGA-23-1024-01A
52 years, female, white, stage:Stage IV, alive, 468 days
1607.2
TCGA-13-0762-01A
65 years, female, white, stage:Stage IIIC, alive, 3400 days
1560.7
TCGA-20-1686-01A
75 years, female, white, stage:Stage IIIC, alive, 89 days
1548.4
TCGA-10-0933-01A
77 years, female, white, stage:Stage IIIC, dead, 446 days
1388.0
TCGA-WR-A838-01A
72 years, female, black or african american, stage:Stage IIIC, dead, 304 days
1326.1
TCGA-30-1714-01A
68 years, female, white, stage:Stage IV, dead, 1158 days
1246.0
TCGA-04-1347-01A
81 years, female, white, stage:Stage IV, alive, 1919 days
1170.8
TCGA-10-0938-01A
80 years, female, white, stage:Stage IIIC, dead, 636 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
FTH1 is not prognostic in Ovary Serous Cystadenocarcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average pTPM
4039.2
Number of samples
81
Samples
Sample
Description
pTPM
DO46551
58 years, female, NA, stage:III, dead, 1055 days
12553.6
DO46611
52 years, female, NA, stage:III, dead, 734 days
11024.7
DO46538
57 years, female, NA, stage:III, dead, 1527 days
10556.7
DO46380
51 years, female, NA, stage:III, dead, 1423 days
9505.9
DO46368
57 years, female, NA, stage:III, dead, 2879 days
8914.7
DO46350
66 years, female, NA, stage:III, dead, 886 days
8119.7
DO46325
54 years, female, NA, stage:III, dead, 477 days
7046.9
DO46333
58 years, female, NA, stage:III, dead, 359 days
6516.9
DO46332
56 years, female, NA, stage:III, dead, 689 days
6493.7
DO46366
65 years, female, NA, stage:III, dead, 2054 days
6453.5
DO46586
55 years, female, NA, stage:III, dead, 1019 days
6289.3
DO46329
52 years, female, NA, stage:III, dead, 1699 days
6158.0
DO46591
58 years, female, NA, stage:III, dead, 195 days
6001.4
DO46606
73 years, female, NA, stage:III, alive, 804 days
5984.8
DO46513
54 years, female, NA, stage:IV, dead, 1883 days
5898.6
DO46388
74 years, female, NA, stage:III, dead, 413 days
5741.8
DO46546
73 years, female, NA, stage:III, dead, 1889 days
5714.6
DO46404
55 years, female, NA, stage:III, dead, 690 days
5635.8
DO46528
56 years, female, NA, stage:III, alive, 6139 days
5476.1
DO46327
54 years, female, NA, stage:III, dead, 184 days
5461.7
DO46348
58 years, female, NA, stage:IV, dead, 287 days
5454.5
DO46346
54 years, female, NA, stage:III, dead, 1187 days
5350.7
DO46354
73 years, female, NA, stage:III, dead, 843 days
5177.3
DO46576
75 years, female, NA, stage:III, alive, 133 days
4728.8
DO46344
46 years, female, NA, stage:III, dead, 642 days
4518.4
DO46400
70 years, female, NA, stage:III, dead, 719 days
4491.5
DO46493
62 years, female, NA, stage:IV, alive, 839 days
4487.0
DO46443
59 years, female, NA, stage:III, dead, 2464 days
4480.2
DO46340
62 years, female, NA, stage:III, dead, 616 days
4445.1
DO46376
58 years, female, NA, stage:III, dead, 1430 days
4371.9
DO46581
66 years, female, NA, stage:III, dead, 408 days
4269.3
DO46390
65 years, female, NA, stage:III, dead, 374 days
4187.7
DO46378
59 years, female, NA, stage:III, alive, 843 days
4099.6
DO46336
70 years, female, NA, stage:IV, dead, 664 days
3977.4
DO46330
60 years, female, NA, stage:III, dead, 684 days
3974.9
DO46568
66 years, female, NA, stage:III, dead, 320 days
3974.7
DO46448
45 years, female, NA, stage:III, dead, 654 days
3950.8
DO46342
67 years, female, NA, stage:III, dead, 1398 days
3901.3
DO46453
66 years, female, NA, stage:III, dead, 3294 days
3796.2
DO46602
74 years, female, NA, stage:III, dead, 205 days
3746.1
DO46364
45 years, female, NA, stage:III, dead, 806 days
3736.8
DO46508
50 years, female, NA, stage:III, dead, 2101 days
3614.1
DO46432
56 years, female, NA, stage:III, alive, 2218 days
3317.1
DO46571
61 years, female, NA, stage:III, dead, 243 days
3260.2
DO46382
62 years, female, NA, stage:IV, dead, 311 days
3207.6
DO46374
69 years, female, NA, stage:III, dead, 1409 days
3164.8
DO46408
56 years, female, NA, stage:III, dead, 489 days
3152.1
DO46533
46 years, female, NA, stage:III, alive, 3667 days
2972.2
DO46356
68 years, female, NA, stage:III, dead, 911 days
2873.2
DO46597
60 years, female, NA, stage:III, dead, 393 days
2868.3
DO46438
55 years, female, NA, stage:IV, alive, 2227 days
2788.1
DO46402
77 years, female, NA, stage:III, dead, 511 days
2743.9
DO46518
62 years, female, NA, stage:III, alive, 2960 days
2636.6
DO46458
67 years, female, NA, stage:IV, alive, 3787 days
2618.9
DO46360
58 years, female, NA, stage:IV, dead, 1759 days
2609.5
DO46566
78 years, female, NA, stage:III, dead, 673 days
2570.1
DO46468
67 years, female, NA, stage:III, alive, 2776 days
2525.1
DO46334
77 years, female, NA, stage:III, dead, 496 days
2441.6
DO46362
61 years, female, NA, stage:III, dead, 1639 days
2432.8
DO46392
48 years, female, NA, stage:III, dead, 628 days
2391.8
DO46372
39 years, female, NA, stage:III, dead, 1326 days
2359.2
DO46394
61 years, female, NA, stage:IV, dead, 1039 days
2313.7
DO46463
49 years, female, NA, stage:III, dead, 2451 days
2238.6
DO46560
45 years, female, NA, stage:IV, dead, 286 days
2212.1
DO46370
54 years, female, NA, stage:III, dead, 1727 days
2122.7
DO46358
60 years, female, NA, stage:III, dead, 423 days
2051.7
DO46386
49 years, female, NA, stage:III, dead, 1162 days
2035.9
DO46326
51 years, female, NA, stage:III, dead, 701 days
1995.8
DO46561
52 years, female, NA, stage:III, dead, 195 days
1953.6
DO46384
55 years, female, NA, stage:III, dead, 614 days
1868.0
DO46523
52 years, female, NA, stage:IV, alive, 1873 days
1854.0
DO46412
64 years, female, NA, stage:III, dead, 597 days
1767.4
DO46352
60 years, female, NA, stage:III, dead, 677 days
1717.8
DO46331
72 years, female, NA, stage:III, dead, 612 days
1493.1
DO46396
64 years, female, NA, stage:III, dead, 583 days
1450.9
DO46338
59 years, female, NA, stage:III, dead, 596 days
1380.3
DO46328
52 years, female, NA, stage:III, dead, 972 days
1281.6
DO46398
66 years, female, NA, stage:III, alive, 437 days
1252.7
DO46588
74 years, female, NA, stage:III, dead, 438 days
1105.9
DO46428
59 years, female, NA, stage:IV, alive, 2644 days
1022.8
DO46436
58 years, female, NA, stage:III, alive, 3193 days
843.6
Show allShow less
OVARY SEROUS CYSTADENOCARCINOMA - Protein relative expression (CPTAC)
Number of samples
108
Samples
Sample ID
Sample type
nRPX
1556af7e-c2ae-4fce-9aae-87c459_D1_D2
Normal
1.8
1c9145ad-1981-4871-aa7e-8b11de_D2
Tumor
1.7
80873a0c-1f40-4d51-bab1-3f2071_D2
Tumor
1.4
0745488e-0bfb-4d1f-8228-dedf76_D1_D2
Normal
1.4
6319b36b-533c-4e86-8e12-80552e_D3
Tumor
1.4
1de8d3d8-fc0e-4be0-8aa7-127c7b_D2
Tumor
1.3
092af714-b97a-457c-b0e9-8c20e8_D2
Normal
1.3
fe83e13f-9754-403b-8f74-d6caf8_D2
Tumor
1.3
318d53c3-216b-4de1-a098-77d6dd_D2
Tumor
1.2
3e746bea-ed68-40e6-b348-6ddf08_D2
Normal
1.2
41d0619e-b299-42e2-ac32-29e784_D2
Tumor
1.1
347e379b-77c0-4dd3-aa25-18c9d1_D2
Tumor
1.1
2b4ce90c-8036-4207-ac3e-54a76f_D2
Tumor
1.1
46c73531-f531-4ec3-97fe-b39d9d_D2
Tumor
1.1
161317f3-1a39-438e-af45-cd2502_D2
Tumor
1.1
685ec3c2-e67a-40d3-9eb3-aa01c9_D1_D2
Normal
1.1
4ccb249a-6722-491e-97e9-e3b4e7_D2
Tumor
1.1
76e77c6b-c80e-4391-bdbb-e1dcea_D2
Tumor
1.0
9b90eb78-2f50-4aeb-b010-d642f9_D2
Tumor
1.0
d38f40fb-dd78-43b2-8b7b-4b6977_D2
Tumor
1.0
e7b656bf-3c34-4ba1-bdf3-c7eefe_D2
Tumor
1.0
285fed94-1495-448e-879b-b55de9_D2
Tumor
1.0
9a7a86d3-bbf2-4d36-941d-c75c03_D1_D2
Tumor
1.0
a65d8e76-640f-4341-a561-afbb57_D2
Normal
1.0
6530147a-efe9-4df6-ac2f-03ece3_D2
Tumor
1.0
7c7ce2d7-6c8a-424e-8e6c-d14ad1_D2
Tumor
0.9
2115808b-6a0d-49bc-a8d7-b83bde_D2
Tumor
0.9
69d552be-7cb2-4bb4-b602-a27b3e_D2
Tumor
0.9
21efd60f-6a31-4b98-9477-16a905_D2
Normal
0.8
c17b0ff9-9057-4848-a0cc-abb25f_D2
Tumor
0.8
8d78194e-fbef-4819-a7b5-b73ae9_D2
Tumor
0.8
3490835c-c004-45ed-91f3-7c206f_D2
Tumor
0.8
1db5574d-aca7-403c-8100-6e705f_D2
Normal
0.8
8ed739dd-ae0f-4881-971a-db3cf4_D1_D2
Normal
0.8
15524912-685a-47ce-a824-567848_D2
Tumor
0.8
9c8e78bf-b03e-4ba0-9909-5ff070_D2
Tumor
0.8
2b73e01c-347a-4dae-a71d-752aeb_D2
Normal
0.7
3fbf076a-824b-4eac-b6dc-bf5e59_D2
Normal
0.7
340a3769-3031-41ae-bb08-a2f696_D2
Normal
0.7
e9d416e7-f661-400a-896e-388545_D2
Tumor
0.7
a583d3ff-8165-43e9-b764-23b7ef_D1_D2
Normal
0.7
2433b136-fc7b-4cea-b958-bc6efb_D2
Tumor
0.7
79b60f32-6cca-4cb6-9a1e-22a3ac_D2
Tumor
0.7
e3ebe010-cd31-4b5d-8fcb-b7103b_D2
Tumor
0.7
cfd76f9a-ce60-4ec7-8e6b-a8fc31_D3
Tumor
0.7
7d953d1d-84b6-4ecd-b1d7-1ed865_D2
Tumor
0.7
3a380577-c134-47ba-a1ce-988d7c_D2
Tumor
0.7
1abbcb28-f221-4cd4-8c01-37b9bb_D1_D2
Normal
0.7
3d3e1888-d67e-4c69-ba83-112d0f_D2
Tumor
0.7
91b287fd-eadb-442d-abcd-20b741_D2
Tumor
0.6
927f0958-db5a-4bc5-92b7-2a3695_D2
Tumor
0.6
3dcf8b3c-c0c5-4dfa-9543-5d30fb_D2
Tumor
0.6
2224c03f-b7b1-4368-887e-2b4cdf_D2
Tumor
0.6
a3a26070-fb84-406a-8280-d555e6_D2
Normal
0.6
62f5840e-6cd7-4200-b651-645e53_D2
Tumor
0.6
994f9b8e-46cb-413f-8ec8-2c2fed_D2
Normal
0.5
1b2ab076-c72f-4bbe-b9f9-657d24_D2
Tumor
0.5
35a345a4-e954-4c81-ae3f-7797cd_D2
Tumor
0.5
ce1e5dfc-2ef1-4633-af93-5ea4d9_D2
Tumor
0.5
31c15e30-21d4-4843-bd4a-9cd0d8_D2
Normal
0.5
5c3971ee-87c7-4dff-b66e-f18892_D2
Tumor
0.5
0c87932d-b6fd-4eb5-b86a-a34d07_D2
Tumor
0.5
a03d1103-b809-42c4-ad5c-5aff58_D2
Tumor
0.5
f6c215ea-5381-4521-bb61-be8e97_D2
Tumor
0.5
49bd51fe-48a1-4828-b66e-b30c38_D2
Tumor
0.5
08296da7-70ea-44df-8646-09f2cc_D2
Tumor
0.5
7069e990-4a4e-4984-a66d-4d835a_D2
Tumor
0.5
05387aad-2a1f-42c2-8d6f-950598_D3
Tumor
0.5
bd266bdd-12e4-42cb-9c49-911bfc_D2
Tumor
0.5
eb3f3494-7057-4afe-b212-e6e9a3_D2
Tumor
0.5
50997c44-1c8b-4d34-b535-4a6cc2_D2
Tumor
0.4
61f76fe6-a1c6-41b8-bdc2-2f9209_D2
Normal
0.4
28d0abdb-f682-4bd3-9425-a9c508_D2
Tumor
0.4
2f901c90-617e-46da-9fac-d68369_D2
Tumor
0.4
a8853382-b726-4ce8-98d5-ca89df_D2
Tumor
0.4
eb0a53df-7620-4024-8d2d-051142_D2
Tumor
0.4
6e209757-a7f4-45af-b5f3-2ebc02_D2
Normal
0.4
3946a96c-e0ae-442f-83b4-a9350e_D2
Tumor
0.4
d109a3c0-350e-47f5-bda0-61899c_D2
Tumor
0.3
efc971f8-54c5-4531-a792-705ecf_D2
Tumor
0.3
0cc794c3-5bf5-4621-b238-58a0f6_D2
Tumor
0.3
b9c1f22e-61f7-45ed-b3b4-5094c7_D2
Normal
0.3
2563cb02-d58a-4286-8634-7502cd_D2
Tumor
0.3
256ac9f5-1e19-44b4-92fb-fef3fc_D2
Tumor
0.2
7edfd606-4bee-4529-9fec-1ca7f0_D2
Normal
0.2
fbb41c94-aabd-49cc-90b2-882c3e_D2
Tumor
0.1
e23eb014-69c1-460a-b9d4-9786c8_D2
Normal
0.1
627e6e36-3dca-4ee5-9755-6f3510_D2
Tumor
0.1
e6850782-fd2a-4c53-b682-1852fe_D2
Tumor
0.1
51c1c79e-5a8e-4b0a-bf92-1c0cab_D2
Tumor
0.1
1772e913-f62e-446a-8cf3-720348_D2
Tumor
0.1
d4791079-c826-4fc7-9d9b-ee20ba_D2
Tumor
0.1
b22659b9-e12c-4725-a7db-a833de_D1_D2
Normal
0.1
27f3ca2d-a86f-479d-8e7e-5307c7_D2
Tumor
0.0
1a10c200-3895-4648-b951-94f99f_D2
Tumor
0.0
af95e2c6-25c4-4ab8-bf06-3e15ff_D2
Tumor
0.0
42d860a3-8a0c-4c44-a09a-9ad8cf_D2
Tumor
0.0
5ea22f5e-307b-491d-801f-8b7fa6_D2
Tumor
0.0
10c2d629-0287-4511-ac25-f29031_D2
Tumor
0.0
52c064a7-78d9-4a1a-85b4-27c6d1_D2
Tumor
-0.1
9e0d47e0-f633-468b-b82b-4d752d_D2
Tumor
-0.1
558333b0-ea23-4303-9e3c-4932b1_D2
Tumor
-0.1
8234f8ea-bdbd-45b0-bd0b-16f1e7_D2
Tumor
-0.1
8e17b45e-6a06-4e4e-913d-7b1edb_D2
Tumor
-0.2
2dc28da8-7ff1-4b9b-b5bd-17cc25_D2
Tumor
-0.3
51a4ce2f-4166-4c6b-a7e0-942d0a_D2
Tumor
-0.3
2ed8beb2-bc63-4bad-b5fe-1916a0_D2
Tumor
-0.6
74a45e5a-a35a-4c60-a4b4-f3f5ea_D2
Tumor
-0.7
Show allShow less
OVARIAN CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
