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BRAIN BASAL GANGLIA Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS MEDULLA OBLONGATA
MIDBRAIN OLFACTORY BULB PITUITARY GLAND PONS RETINA SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
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VALIDATION
Brain proteome
Basal ganglia
BASAL GANGLIA - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glial cells: High
Neuronal cells: Medium
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:66.8 nTPM
HPA Brain:122.6 nTPM
GTEx:66.8 nTPM
FANTOM5:194.2 Scaled Tags Per Million
Pig:91.1 nTPM
Mouse:64.0 nTPM
Allen mouse:8.4 Expression energy

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA018883
Glial cells High
Neuronal cells Medium



BASAL GANGLIA - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

122.6
Sample id Sample description nTPM
Caudate nucleus
nTPM: 113.1
2289 Male, age 61, right hemisphere 126.1
2846 Female, age 79, unknown 119.7
2288 Male, age 75, left hemisphere 119.6
2290 Female, age 72, unknown 112.5
1857 Female, age 85, left hemisphere 111.5
1781 Male, age 74, unknown 108.6
2481 Female, age 94, left hemisphere 106.4
1854 Male, age 80, left hemisphere 100.2
Globus pallidus, externus
nTPM: 119.8
2646 Male, age 61, right hemisphere 152.0
2567 Female, age 72, unknown 140.8
2395 Male, age 75, both hemispheres 105.0
1996 Male, age 80, right hemisphere 101.4
2772 Female, age 79, unknown 99.7
Globus pallidus, internus
nTPM: 118.8
2566 Female, age 72, unknown 161.2
1818 Male, age 74, unknown 121.2
2287 Male, age 75, right hemisphere 114.2
2111 Female, age 85, right hemisphere 111.1
2778 Female, age 91, both hemispheres 110.7
2037 Male, age 80, right hemisphere 107.9
2483 Female, age 94, right hemisphere 105.3
Nucleus accumbens
nTPM: 112.1
2698 Female, age 72, unknown 136.7
1783 Male, age 74, unknown 115.3
1856 Female, age 91, right hemisphere 114.4
2391 Female, age 94, left hemisphere 110.9
2824 Male, age 61, right hemisphere 110.9
2286 Male, age 75, left hemisphere 106.4
1806 Female, age 85, left hemisphere 104.4
2732 Male, age 80, right hemisphere 97.7
Nucleus basalis of Meynert
nTPM: 122.6
2569 Male, age 61, both hemispheres 155.9
2821 Male, age 75, both hemispheres 134.7
2393 Male, age 80, right hemisphere 102.9
2484 Female, age 94, left hemisphere 97.0
Nucleus of the diagonal band
nTPM: 113.3
2195 Female, age 85, both hemispheres 123.9
1979 Male, age 74, unknown 117.2
2775 Male, age 80, right hemisphere 113.7
1812 Female, age 91, both hemispheres 109.1
2029 Male, age 61, right hemisphere 102.7
Putamen
nTPM: 113.5
2647 Male, age 75, left hemisphere 140.7
1829 Male, age 74, unknown 123.3
1937 Female, age 91, right hemisphere 111.5
1838 Male, age 80, right hemisphere 110.1
2489 Female, age 72, unknown 108.9
2482 Female, age 94, left hemisphere 102.4
2466 Female, age 79, unknown 98.0
Septal nuclei
nTPM: 107.2
2629 Female, age 94, right hemisphere 144.9
1960 Male, age 74, unknown 110.4
2059 Female, age 85, both hemispheres 103.6
2009 Female, age 91, both hemispheres 103.4
2199 Male, age 80, right hemisphere 101.2
2031 Female, age 72, unknown 93.7
2394 Male, age 61, left hemisphere 93.3
Stria terminalis, bed nucleus
nTPM: 101.8
2201 Male, age 74, unknown 110.7
1974 Female, age 91, both hemispheres 104.8
2486 Female, age 94, both hemispheres 89.9

BASAL GANGLIA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

66.8
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 65.1
Samples: 246

Max nTPM: 107.5
Min nTPM: 38.3
Std nTPM: 10.4
Median nTPM: 65.6
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 107.5
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 97.0
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 95.2
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 92.7
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 88.0
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 87.5
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 86.3
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 86.1
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 85.3
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 85.0
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 83.5
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 81.7
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 81.5
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 81.2
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 81.1
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 80.1
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 79.4
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 78.4
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 78.3
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 78.0
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 77.8
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 76.9
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 76.7
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 76.5
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 76.4
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 76.1
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 76.0
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 75.9
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 75.9
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 75.7
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 75.6
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 75.6
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 75.0
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 75.0
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 74.8
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 74.4
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 74.4
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 74.1
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 73.9
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 73.9
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 73.8
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 73.8
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 73.8
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 73.7
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 73.7
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 73.6
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 73.6
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 73.5
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 73.5
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 73.4
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 73.3
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 73.2
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 72.8
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 72.6
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 72.6
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 72.6
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 72.4
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 72.4
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 72.4
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 72.0
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 71.6
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 71.6
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 71.4
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 71.4
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 71.2
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 71.2
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 71.0
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 70.9
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 70.7
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 70.5
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 70.1
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 70.1
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 70.1
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 70.0
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 70.0
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 69.9
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 69.8
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 69.4
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 69.2
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 69.2
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 69.0
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 69.0
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 69.0
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 68.9
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 68.8
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 68.7
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 68.7
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 68.7
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 68.6
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 68.6
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 68.5
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 68.4
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 68.3
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 68.3
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 68.0
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 67.9
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 67.8
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 67.8
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 67.8
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 67.8
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 67.8
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 67.7
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 67.6
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 67.4
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 67.4
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 67.3
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 67.3
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 67.2
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 67.2
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 67.1
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 67.1
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 67.0
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 66.9
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 66.9
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 66.9
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 66.6
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 66.5
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 66.4
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 66.4
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 66.2
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 66.2
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 65.8
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 65.6
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 65.6
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 65.5
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 65.5
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 65.5
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 65.3
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 65.3
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 65.2
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 64.9
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 64.4
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 64.4
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 64.4
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 64.4
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 64.3
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 63.7
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 63.7
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 63.6
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 63.6
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 63.5
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 63.4
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 63.4
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 63.2
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 63.2
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 63.1
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 62.8
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 62.7
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 62.7
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 62.7
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 62.6
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 62.6
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 62.5
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 62.3
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 62.3
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 62.2
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 62.1
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 61.9
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 61.5
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 61.2
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 61.2
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 60.9
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 60.8
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 60.7
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 60.7
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 60.6
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 60.5
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 60.4
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 60.4
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 60.3
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 60.2
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 60.1
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 60.1
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 60.1
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 60.0
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 59.9
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 59.5
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 59.5
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 58.8
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 58.8
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 58.6
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 58.5
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 58.4
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 58.1
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 58.1
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 57.7
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 57.5
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 57.5
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 57.2
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 57.2
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 57.0
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 56.7
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 56.5
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 56.4
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 56.2
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 56.0
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 55.8
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 55.7
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 55.6
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 55.3
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 55.2
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 55.2
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 54.8
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 54.7
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 54.7
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 54.4
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 54.2
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 54.2
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 54.0
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 54.0
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 53.6
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 53.5
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 53.4
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 53.3
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 53.1
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 53.0
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 52.8
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 52.7
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 52.3
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 52.1
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 52.1
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 52.0
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 51.4
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 51.3
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 51.2
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 50.8
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 50.5
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 50.5
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 50.4
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 49.6
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 49.2
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 48.9
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 48.5
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 48.0
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 47.6
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 47.1
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 46.9
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 46.8
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 46.6
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 46.3
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 45.8
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 45.0
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 44.4
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 44.2
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 38.5
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 38.3
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Brain - Nucleus accumbens (basal ganglia)
Average nTPM: 66.8
Samples: 246

Max nTPM: 106.2
Min nTPM: 27.9
Std nTPM: 11.0
Median nTPM: 66.8
GTEX-13QJC-0011-R6a-SM-5S2VI 60-69 years, female 106.2
GTEX-13N2G-0011-R6b-SM-5MR3P 60-69 years, male 100.6
GTEX-1F75B-0011-R6a-SM-ARZMI 50-59 years, male 96.7
GTEX-ZDXO-0011-R6a-SM-4WWCT 60-69 years, male 94.8
GTEX-NPJ8-0011-R6a-SM-2HMKB 40-49 years, male 92.8
GTEX-13IVO-0011-R6b-SM-5K7X9 70-79 years, male 92.0
GTEX-12ZZY-0011-R6b-SM-5EGLA 60-69 years, male 90.5
GTEX-12WSH-0011-R6b-SM-5P9F4 50-59 years, male 88.1
GTEX-12ZZX-0011-R6a-SM-5HL8L 40-49 years, female 87.7
GTEX-NL4W-0011-R6a-SM-2I3GA 50-59 years, male 87.5
GTEX-NL3H-0011-R6a-SM-2I3G8 60-69 years, male 85.7
GTEX-1AX9I-0011-R6a-SM-7P8PK 60-69 years, male 85.7
GTEX-1GN73-0011-R6b-SM-CJI2T 60-69 years, male 85.2
GTEX-13JVG-0011-R6a-SM-5MR3E 60-69 years, male 84.5
GTEX-13FLV-0011-R6a-SM-5KLZ4 50-59 years, male 84.3
GTEX-N7MS-0011-R6a-SM-2HMJ4 60-69 years, male 83.3
GTEX-145MI-0011-R6a-SM-5PNZA 60-69 years, female 82.7
GTEX-1IKK5-0011-R6b-SM-A9SLY 60-69 years, male 81.8
GTEX-14BIN-0011-R6a-SM-5S2RH 50-59 years, female 81.7
GTEX-1CB4J-0011-R6b-SM-9WG7B 60-69 years, male 81.7
GTEX-1HB9E-0011-R6b-SM-A9G1P 50-59 years, male 81.0
GTEX-1I1CD-0011-R6b-SM-CJI3Y 60-69 years, female 81.0
GTEX-RU72-0011-R6A-SM-2TF71 50-59 years, female 80.9
GTEX-1HGF4-0011-R6a-SM-A96S1 60-69 years, male 80.5
GTEX-13N1W-0011-R6a-SM-5MR43 70-79 years, male 79.8
GTEX-1B8SF-0011-R6b-SM-7MXUD 60-69 years, male 79.7
GTEX-1HR9M-0011-R6a-SM-ARU6Z 60-69 years, male 79.6
GTEX-1A8G6-0011-R6b-SM-7P8PE 60-69 years, male 79.3
GTEX-1313W-0011-R6a-SM-5K7XO 50-59 years, female 78.9
GTEX-1C6VR-0011-R6a-SM-7MXU8 60-69 years, male 78.8
GTEX-13NYB-0011-R6b-SM-5MR51 40-49 years, male 78.4
GTEX-13OVJ-0011-R6b-SM-5L3GH 50-59 years, female 78.4
GTEX-14PJM-0011-R6a-SM-6872G 50-59 years, female 77.9
GTEX-WZTO-0011-R6B-SM-4E3J6 40-49 years, male 77.7
GTEX-147GR-0011-R6b-SM-5S2RO 60-69 years, male 77.6
GTEX-14JIY-0011-R6b-SM-68714 60-69 years, male 77.6
GTEX-1F75A-0011-R6b-SM-9QEHD 50-59 years, male 77.5
GTEX-144GL-0011-R6a-SM-5P9HW 50-59 years, male 77.3
GTEX-X585-0011-R6A-SM-46MVJ 50-59 years, male 77.0
GTEX-1ICLZ-0011-R6b-SM-A9G3A 60-69 years, male 76.4
GTEX-14ASI-0011-R6a-SM-5S2UZ 60-69 years, male 76.0
GTEX-ZV68-0011-R6a-SM-51MSR 50-59 years, female 76.0
GTEX-1I1GR-0011-R6a-SM-CMKHI 60-69 years, male 76.0
GTEX-1OJC4-0011-R6a-SM-EXOIM 50-59 years, female 76.0
GTEX-12ZZW-0011-R6a-SM-5DUVZ 50-59 years, male 75.9
GTEX-18A6Q-0011-R6a-SM-7LG6R 60-69 years, male 75.9
GTEX-11GSP-0011-R6b-SM-57WBQ 60-69 years, female 75.5
GTEX-1F6I4-0011-R6a-SM-CE6R4 60-69 years, male 75.4
GTEX-1RLM8-0011-R6a-SM-EYYXS 50-59 years, male 75.3
GTEX-ZE9C-0011-R6a-SM-4WWCW 60-69 years, male 75.1
GTEX-1GTWX-0011-R6a-SM-A96RN 60-69 years, male 75.1
GTEX-13OW5-0011-R6b-SM-5O9BW 60-69 years, male 74.8
GTEX-13OVH-0011-R6b-SM-5LUAX 70-79 years, male 74.4
GTEX-11DZ1-0011-R6b-SM-DNZZG 50-59 years, male 74.4
GTEX-1HBPI-0011-R6b-SM-A9G1T 50-59 years, male 74.3
GTEX-1IDJH-0011-R6a-SM-A9SLZ 70-79 years, male 74.3
GTEX-13O3Q-0011-R6a-SM-5KM2V 50-59 years, male 74.2
GTEX-12WSC-0011-R6b-SM-5LU99 50-59 years, male 73.9
GTEX-Q2AG-0011-R6A-SM-2HML7 40-49 years, female 73.9
GTEX-139TS-0011-R6a-SM-5J2OB 60-69 years, male 73.8
GTEX-12WSD-0011-R6b-SM-5P9JU 60-69 years, female 73.6
GTEX-11NV4-0011-R6a-SM-57WD5 60-69 years, male 73.4
GTEX-13NYS-0011-R6b-SM-5MR3R 60-69 years, male 73.4
GTEX-1H1CY-0011-R6b-SM-CE6RP 60-69 years, female 73.1
GTEX-NPJ7-0011-R6a-SM-2I3G7 60-69 years, female 72.9
GTEX-1CB4G-0011-R6b-SM-9QEGO 60-69 years, male 72.7
GTEX-1F48J-0011-R6a-SM-CJI2F 50-59 years, female 72.7
GTEX-X4EP-0011-R6A-SM-3P629 60-69 years, female 72.6
GTEX-139TT-0011-R6b-SM-5J2ON 60-69 years, male 72.5
GTEX-1H1ZS-0011-R6b-SM-A9G1F 70-79 years, male 72.3
GTEX-1I1GQ-0011-R6b-SM-CE6SE 50-59 years, male 72.3
GTEX-13PDP-0011-R6b-SM-5O9D5 60-69 years, male 72.2
GTEX-18464-0011-R6a-SM-731CA 50-59 years, male 72.2
GTEX-13S7M-0011-R6b-SM-5O9D8 60-69 years, female 72.1
GTEX-P44G-0011-R6A-SM-2XCD3 30-39 years, male 72.1
GTEX-1B996-0011-R6b-SM-793AQ 60-69 years, male 72.0
GTEX-1F7RK-0011-R6b-SM-ARZMG 20-29 years, female 71.9
GTEX-13VXU-0011-R6a-SM-5SI71 50-59 years, male 71.8
GTEX-1LB8K-0011-R6a-SM-EXURT 50-59 years, male 71.8
GTEX-13SLX-0011-R6a-SM-5PNX4 50-59 years, female 71.7
GTEX-N7MT-0011-R6a-SM-2I3G3 60-69 years, female 71.4
GTEX-1IL2U-0011-R6a-SM-ARZLG 60-69 years, male 71.3
GTEX-1MJK2-0011-R6a-SM-EXUS3 50-59 years, male 71.3
GTEX-12WSM-0011-R6b-SM-5EQ6N 60-69 years, male 71.2
GTEX-13X6K-0011-R6a-SM-5P9K6 60-69 years, female 71.1
GTEX-WWYW-0011-R6A-SM-3NB3G 50-59 years, female 71.1
GTEX-1JJEA-0011-R6a-SM-EXUS1 60-69 years, male 71.0
GTEX-13112-0011-R6b-SM-5DUVK 50-59 years, male 70.9
GTEX-1GF9V-0011-R6b-SM-CJI2Q 60-69 years, male 70.6
GTEX-1B933-0011-R6b-SM-79OOQ 50-59 years, female 70.4
GTEX-1IY9M-0011-R6a-SM-D4P28 60-69 years, male 70.0
GTEX-13X6J-0011-R6a-SM-5PNUB 50-59 years, male 69.9
GTEX-R55E-0011-R6A-SM-2TC5T 20-29 years, male 69.9
GTEX-1HUB1-0011-R6b-SM-ARU6W 60-69 years, male 69.9
GTEX-X4XX-0011-R6B-SM-46MWP 60-69 years, male 69.7
GTEX-15CHQ-0011-R6b-SM-69LOX 60-69 years, male 69.6
GTEX-144GO-0011-R6b-SM-5S2V7 60-69 years, male 69.5
GTEX-ZUA1-0011-R6b-SM-4YCDD 40-49 years, male 69.4
GTEX-12WSF-0011-R6b-SM-5HL8W 70-79 years, male 69.3
GTEX-145LS-0011-R6b-SM-5PNWL 60-69 years, female 69.3
GTEX-1I1GV-0011-R6b-SM-ARU6Q 60-69 years, male 69.1
GTEX-13O3O-0011-R6b-SM-5P9GY 60-69 years, female 68.7
GTEX-1C6WA-0011-R6a-SM-7PBYP 60-69 years, male 68.7
GTEX-Y8DK-0011-R6A-SM-4V6EG 60-69 years, male 68.6
GTEX-17HHY-0011-R6b-SM-7189Z 50-59 years, male 68.5
GTEX-1399T-0011-R6b-SM-5K7YL 60-69 years, male 68.2
GTEX-S7PM-0011-R6A-SM-3NM8F 60-69 years, male 68.2
GTEX-1F6IF-0011-R6a-SM-9QEIO 60-69 years, male 68.2
GTEX-1EN7A-0011-R6b-SM-9QEHW 40-49 years, male 68.1
GTEX-1I1HK-0011-R6b-SM-CM2T9 60-69 years, male 68.1
GTEX-ZE7O-0011-R6a-SM-57WCI 50-59 years, female 68.0
GTEX-131XH-0011-R6a-SM-5KM2G 50-59 years, male 67.9
GTEX-17F97-0011-R6a-SM-7EPGS 50-59 years, male 67.6
GTEX-145MH-0011-R6a-SM-5PNZ7 50-59 years, male 67.5
GTEX-183WM-0011-R6b-SM-72D66 70-79 years, female 67.5
GTEX-ZXG5-0011-R6a-SM-57WBZ 60-69 years, male 67.5
GTEX-1GMRU-0011-R6b-SM-A9G3B 50-59 years, male 67.5
GTEX-ZVZQ-0011-R6b-SM-57WAY 60-69 years, female 67.4
GTEX-1F75W-0011-R6a-SM-9QEI5 60-69 years, male 67.4
GTEX-Z93S-0011-R6b-SM-4RGNJ 50-59 years, male 67.3
GTEX-1JMLX-0011-R6b-SM-EXUT9 50-59 years, male 67.2
GTEX-17HG3-0011-R6b-SM-79OK8 30-39 years, female 67.1
GTEX-1BAJH-0011-R6b-SM-7MXT2 70-79 years, male 66.9
GTEX-1GZHY-0011-R6a-SM-9OSWL 50-59 years, female 66.8
GTEX-12WSE-0011-R6b-SM-5LZV5 20-29 years, male 66.7
GTEX-13RTJ-0011-R6a-SM-5SI74 60-69 years, male 66.6
GTEX-WL46-0011-R6A-SM-3LK6X 50-59 years, male 66.3
GTEX-1HFI6-0011-R6b-SM-CM2SR 40-49 years, male 66.2
GTEX-17EVQ-0011-R6a-SM-7189U 70-79 years, male 66.1
GTEX-12584-0011-R6a-SM-5NQ7C 40-49 years, male 66.0
GTEX-13G51-0011-R6b-SM-5LZX4 60-69 years, male 66.0
GTEX-15G19-0011-R6b-SM-7KUM3 60-69 years, male 65.6
GTEX-TSE9-0011-R6A-SM-3DB7L 60-69 years, female 65.6
GTEX-13FHO-0011-R6b-SM-5LZX1 60-69 years, male 65.5
GTEX-13JUV-0011-R6b-SM-5LZYG 40-49 years, female 65.5
GTEX-1CB4H-0011-R6b-SM-CKZNK 60-69 years, female 65.5
GTEX-14PN4-0011-R6b-SM-69LQU 50-59 years, male 65.4
GTEX-1HBPM-0011-R6b-SM-ARU73 60-69 years, female 65.2
GTEX-OHPN-0011-R6A-SM-2I5FH 60-69 years, female 65.1
GTEX-14PQA-0011-R6b-SM-6AJAM 50-59 years, female 65.0
GTEX-1F88E-0011-R6a-SM-CKZNW 60-69 years, female 65.0
GTEX-1H3NZ-0011-R6b-SM-A9G1N 60-69 years, male 65.0
GTEX-1I1GS-0011-R6b-SM-CMKHE 60-69 years, male 64.9
GTEX-13PL6-0011-R6a-SM-5O9C5 40-49 years, female 64.8
GTEX-12ZZZ-0011-R6b-SM-5EQ5B 60-69 years, male 64.7
GTEX-145LU-0011-R6a-SM-5S2V6 50-59 years, male 64.7
GTEX-11OF3-0011-R6b-SM-57WBG 60-69 years, male 64.6
GTEX-T2IS-0011-R6A-SM-32QP2 20-29 years, female 64.6
GTEX-13FLW-0011-R6b-SM-5L3EN 50-59 years, male 64.5
GTEX-1LC47-0011-R6b-SM-EZ6MI 60-69 years, male 64.5
GTEX-11WQC-0011-R6a-SM-5BC77 60-69 years, male 64.3
GTEX-14BIM-0011-R6b-SM-5S2VB 60-69 years, female 64.2
GTEX-UTHO-0011-R6A-SM-3GIJW 60-69 years, male 64.1
GTEX-13FXS-0011-R6b-SM-5L3F7 50-59 years, male 63.9
GTEX-14BMV-0011-R6b-SM-5YY9I 50-59 years, male 63.9
GTEX-X261-0011-R6B-SM-4E3J8 50-59 years, male 63.8
GTEX-15ER7-0011-R6a-SM-6M46M 20-29 years, female 63.7
GTEX-14JG1-0011-R6b-SM-5YYAU 40-49 years, male 63.6
GTEX-1EMGI-0011-R6a-SM-9OSVR 60-69 years, male 63.5
GTEX-13OVL-0011-R6a-SM-5L3G4 50-59 years, male 63.4
GTEX-1GN2E-0011-R6b-SM-9QEII 60-69 years, male 63.4
GTEX-15DCD-0011-R6b-SM-6M46L 70-79 years, female 63.2
GTEX-13FHP-0011-R6b-SM-5LZY6 50-59 years, male 63.1
GTEX-QVJO-0011-R6A-SM-2S1QN 60-69 years, female 63.1
GTEX-11DXY-0011-R6a-SM-DNZZF 60-69 years, male 63.1
GTEX-14ABY-0011-R6a-SM-5PNWR 50-59 years, male 63.0
GTEX-1H4P4-0011-R6a-SM-ARZLR 50-59 years, male 62.8
GTEX-WHSE-0011-R6A-SM-3P5ZP 20-29 years, male 62.6
GTEX-11ONC-0011-R6a-SM-DO12A 60-69 years, male 62.6
GTEX-S7SE-0011-R6A-SM-2XCD9 50-59 years, male 62.5
GTEX-131XW-0011-R6b-SM-5K7XY 50-59 years, female 62.4
GTEX-1IKOH-0011-R6b-SM-A9G1W 60-69 years, female 61.9
GTEX-13SLW-0011-R6a-SM-5O9BH 70-79 years, male 61.8
GTEX-1EX96-0011-R6a-SM-9OSVV 50-59 years, male 61.3
GTEX-15RJE-0011-R6a-SM-7DHL8 40-49 years, male 61.2
GTEX-13OW8-0011-R6b-SM-5L3I3 60-69 years, male 61.1
GTEX-YFC4-0011-R6b-SM-4V6E1 40-49 years, female 60.9
GTEX-1E1VI-0011-R6a-SM-9OSVJ 50-59 years, male 60.8
GTEX-1H1DG-0011-R6a-SM-A9SK8 70-79 years, male 60.8
GTEX-YJ89-0011-R6a-SM-4V6GN 60-69 years, male 60.2
GTEX-WVLH-0011-R6A-SM-3MJFZ 50-59 years, male 60.1
GTEX-1J1OQ-0011-R6a-SM-ARU86 40-49 years, female 60.1
GTEX-1B8L1-0011-R6b-SM-7P8SU 60-69 years, male 59.7
GTEX-1H23P-0011-R6b-SM-A9G1H 60-69 years, male 59.3
GTEX-1MA7X-0011-R6a-SM-EYYWR 60-69 years, male 59.1
GTEX-14LZ3-0011-R6a-SM-D3L8C 60-69 years, female 59.0
GTEX-1J8Q2-0011-R6a-SM-CKZPG 60-69 years, male 58.8
GTEX-1IGQW-0011-R6a-SM-CM2TC 60-69 years, male 58.7
GTEX-XLM4-0011-R6A-SM-4AT4B 60-69 years, male 58.4
GTEX-1E2YA-0011-R6b-SM-CE6R2 50-59 years, male 58.2
GTEX-1GZ4I-0011-R6b-SM-9WG77 50-59 years, male 58.2
GTEX-17EVP-0011-R6b-SM-7LT99 40-49 years, male 57.7
GTEX-11PRG-0011-R6b-SM-DO923 50-59 years, male 57.7
GTEX-18465-0011-R6a-SM-7LG6M 50-59 years, male 57.6
GTEX-14PHW-0011-R6b-SM-5YYAR 60-69 years, female 57.3
GTEX-15DYW-0011-R6b-SM-6PALA 60-69 years, female 57.2
GTEX-QVUS-0011-R6A-SM-3GACX 60-69 years, female 57.1
GTEX-14E7W-0011-R6b-SM-5ZZV3 70-79 years, male 56.9
GTEX-XMD1-0011-R6A-SM-4AT5K 60-69 years, male 56.6
GTEX-1LVA9-0011-R6a-SM-EYYWH 50-59 years, male 56.4
GTEX-ZF28-0011-R6a-SM-4WKHI 60-69 years, male 56.3
GTEX-13OW6-0011-R6b-SM-5L3GR 50-59 years, male 56.2
GTEX-1C64N-0011-R6a-SM-7IGO9 50-59 years, male 56.0
GTEX-PWO3-0011-R6A-SM-2I5F3 60-69 years, female 56.0
GTEX-1LH75-0011-R6a-SM-EXURS 50-59 years, female 55.5
GTEX-17JCI-0011-R6a-SM-72D6D 60-69 years, female 55.4
GTEX-T6MN-0011-R6A-SM-32QP8 50-59 years, male 55.3
GTEX-ZVT3-0011-R6a-SM-51MSU 60-69 years, female 55.1
GTEX-15EO6-0011-R6a-SM-7KULK 50-59 years, male 54.9
GTEX-ZAB4-0011-R6a-SM-4SOKD 40-49 years, male 54.7
GTEX-1R46S-0011-R6a-SM-EZ6N6 60-69 years, female 54.7
GTEX-16Z82-0011-R6a-SM-7IGLV 60-69 years, male 54.4
GTEX-X4XY-0011-R6B-SM-46MVB 60-69 years, male 54.0
GTEX-QDT8-0011-R6A-SM-32PKI 30-39 years, female 53.8
GTEX-132Q8-0011-R6a-SM-5K7YN 60-69 years, male 53.7
GTEX-1A3MX-0011-R6a-SM-7P8S9 60-69 years, male 53.7
GTEX-1HBPH-0011-R6a-SM-CKZOV 40-49 years, female 53.6
GTEX-16YQH-0011-R6b-SM-7938T 30-39 years, male 53.5
GTEX-11NUK-0011-R6a-SM-DO93O 50-59 years, male 53.5
GTEX-11DXW-0011-R6a-SM-DO11N 40-49 years, male 53.4
GTEX-1GF9W-0011-R6b-SM-9QEIE 60-69 years, male 53.3
GTEX-17MF6-0011-R6b-SM-7LG6G 40-49 years, male 52.8
GTEX-11TTK-0011-R6b-SM-DNZZW 60-69 years, female 52.7
GTEX-1GN1U-0011-R6a-SM-CKZNO 50-59 years, female 52.1
GTEX-1H3O1-0011-R6b-SM-CL54U 60-69 years, male 52.1
GTEX-11DYG-0011-R6a-SM-DO936 60-69 years, male 51.8
GTEX-P44H-0011-R6A-SM-2XCF3 40-49 years, male 51.7
GTEX-14C5O-0011-R6a-SM-5YYB6 60-69 years, male 51.6
GTEX-1EWIQ-0011-R6a-SM-ARU8G 70-79 years, female 51.3
GTEX-1GZ2Q-0011-R6a-SM-9OSWM 40-49 years, male 50.7
GTEX-1EKGG-0011-R6a-SM-CL538 60-69 years, male 50.0
GTEX-1H3VE-0011-R6b-SM-A9G1M 40-49 years, male 49.8
GTEX-1N2DW-0011-R6a-SM-EZ6MW 50-59 years, male 49.6
GTEX-1HT8W-0011-R6a-SM-CM2SY 30-39 years, male 49.5
GTEX-1I19N-0011-R6b-SM-CY8GC 70-79 years, male 49.5
GTEX-1GMR8-0011-R6b-SM-CE6RC 50-59 years, female 49.4
GTEX-QMR6-0011-R6A-SM-32PKP 50-59 years, male 48.8
GTEX-1192X-0011-R6a-SM-DNZZB 50-59 years, male 48.4
GTEX-1EH9U-0011-R6a-SM-CJI2C 60-69 years, male 47.1
GTEX-1LVAO-0011-R6b-SM-EZ6MX 60-69 years, male 47.0
GTEX-1445S-0011-R6b-SM-5PNUF 60-69 years, male 46.9
GTEX-T5JC-0011-R6A-SM-D3L87 20-29 years, male 44.6
GTEX-16XZZ-0011-R6a-SM-7IGNE 60-69 years, male 44.1
GTEX-147F4-0011-R6b-SM-5S2UP 50-59 years, male 41.9
GTEX-11O72-0011-R6a-SM-DNZZQ 40-49 years, male 41.7
GTEX-14753-0011-R6b-SM-5S2UD 60-69 years, male 27.9
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Brain - Putamen (basal ganglia)
Average nTPM: 65.3
Samples: 205

Max nTPM: 131.7
Min nTPM: 40.1
Std nTPM: 11.8
Median nTPM: 64.5
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 131.7
GTEX-NPJ8-0011-R7a-SM-2HMJV 40-49 years, male 111.6
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 103.3
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 97.0
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 92.9
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 88.7
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 87.4
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 86.4
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 86.1
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 85.6
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 85.6
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 85.0
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 84.7
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 84.5
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 83.5
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 81.3
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 80.7
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 80.1
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 79.5
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 79.5
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 78.6
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 78.2
GTEX-P44G-0011-R7A-SM-2I3F9 30-39 years, male 77.9
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 77.9
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 77.4
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 76.9
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 76.7
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 76.6
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 76.0
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 76.0
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 75.4
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 74.8
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 74.2
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 74.2
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 74.1
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 74.0
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 73.4
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 73.2
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 72.8
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 72.7
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 72.4
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 72.1
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 72.0
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 71.9
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 71.8
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 71.8
GTEX-R55E-0011-R7A-SM-2TC5Z 20-29 years, male 71.8
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 71.6
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 71.5
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 71.2
GTEX-OHPN-0011-R7A-SM-2I5FI 60-69 years, female 71.2
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 71.2
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 71.0
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 71.0
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 71.0
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 70.6
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 70.4
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 70.3
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 70.2
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 70.1
GTEX-TSE9-0011-R7A-SM-3DB7P 60-69 years, female 70.0
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 70.0
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 69.9
GTEX-N7MS-0011-R7a-SM-2HMKN 60-69 years, male 69.9
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 69.5
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 69.1
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 68.8
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 68.7
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 68.6
GTEX-S7SE-0011-R7A-SM-2XCDI 50-59 years, male 68.5
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 68.3
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 68.0
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 67.6
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 67.5
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 67.3
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 67.3
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 67.3
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 67.2
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 67.0
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 67.0
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 66.9
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 66.5
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 66.3
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 66.2
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 66.2
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 66.0
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 66.0
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 65.9
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 65.8
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 65.8
GTEX-NL3H-0011-R7a-SM-2I3G5 60-69 years, male 65.8
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 65.7
GTEX-1IOXB-0011-R7b-SM-CE6SM 50-59 years, male 65.7
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 65.5
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 65.3
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 65.3
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 65.2
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 65.0
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 65.0
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 64.7
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 64.5
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 64.5
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 64.5
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 64.2
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 64.2
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 64.2
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 64.1
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 63.9
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 63.8
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 63.7
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 63.6
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 63.3
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 63.0
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 62.8
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 62.8
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 62.7
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 62.6
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 62.5
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 62.2
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 62.0
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 62.0
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 62.0
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 61.8
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 61.7
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 61.6
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 61.5
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 61.3
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 61.3
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 61.1
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 61.0
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 60.7
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 60.7
GTEX-18464-0011-R7b-SM-731CM 50-59 years, male 60.3
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 60.0
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 60.0
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 59.7
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 59.7
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 59.6
GTEX-1J1OQ-0011-R7b-SM-ARU87 40-49 years, female 59.4
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 58.9
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 58.8
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 58.7
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 58.6
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 58.4
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 58.4
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 58.3
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 58.1
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 58.1
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 58.1
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 58.0
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 58.0
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 57.9
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 57.9
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 57.9
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 57.7
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 57.7
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 57.6
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 57.5
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 57.3
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 57.3
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 57.3
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 57.2
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 57.1
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 56.9
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 56.9
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 56.9
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 56.6
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 56.4
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 56.2
GTEX-RU72-0011-R7A-SM-2TF5U 50-59 years, female 55.9
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 55.2
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 54.9
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 54.9
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 54.6
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 54.5
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 54.4
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 54.2
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 53.6
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 53.2
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 53.0
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 52.9
GTEX-QVJO-0011-R7A-SM-2S1QO 60-69 years, female 52.7
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 51.9
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 51.8
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 51.6
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 51.3
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 51.0
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 50.3
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 50.2
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 50.1
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 49.8
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 49.2
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 49.1
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 48.6
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 48.3
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 48.2
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 47.9
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 47.8
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 47.5
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 45.8
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 45.8
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 44.9
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 44.8
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 42.8
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 40.1
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BASAL GANGLIA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

194.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 179.9
FF:10164-103B2 76 years, female 179.9
Nucleus accumbens
Scaled Tags Per Million: 194.2
FF:10037-101F1 23-56 years, mixed 194.2
Putamen
Scaled Tags Per Million: 165.8
FF:10176-103C5 60 years, female 165.8
Globus pallidus
Scaled Tags Per Million: 168.9
FF:10161-103A8 76 years, female 203.6
FF:10175-103C4 60 years, female 134.1

BASAL GANGLIA - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

91.1
Pig sample Sample description nTPM
Caudate
nTPM: 91.1
Samples: 4

Max nTPM: 100.1
Min nTPM: 81.8
Sample A Female 81.8
Sample B Female 100.1
Sample C Male 96.2
Sample D Male 86.2
Putamen
nTPM: 88.9
Samples: 4

Max nTPM: 105.6
Min nTPM: 80.4
Sample A Female 86.0
Sample B Female 83.6
Sample C Male 80.4
Sample D Male 105.6
Septum
nTPM: 87.2
Samples: 4

Max nTPM: 93.3
Min nTPM: 83.4
Sample A Female 86.0
Sample B Female 86.0
Sample C Male 83.4
Sample D Male 93.3
Ventral pallidum
nTPM: 89.1
Samples: 4

Max nTPM: 96.7
Min nTPM: 82.0
Sample A Female 82.0
Sample B Female 87.7
Sample C Male 90.1
Sample D Male 96.7

BASAL GANGLIA - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

64.0
Mouse sample Sample description nTPM
Caudate putamen
nTPM: 64.0
Samples: 4

Max nTPM: 71.0
Min nTPM: 56.9
Sample A Male 58.4
Sample B Male 56.9
Sample C Female 69.7
Sample D Female 71.0
Septum
nTPM: 54.6
Samples: 4

Max nTPM: 58.9
Min nTPM: 52.7
Sample A Male 53.2
Sample B Male 53.6
Sample C Female 52.7
Sample D Female 58.9
Ventral forebrain
nTPM: 59.2
Samples: 4

Max nTPM: 67.9
Min nTPM: 50.5
Sample A Male 50.5
Sample B Male 64.1
Sample C Female 54.3
Sample D Female 67.9

BASAL GANGLIA - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

8.4
Allen experiment id Experiment description Expression energy
Striatum
Expression energy: 8.4
68668024 Antisense, RP_050203_01_C07, Mouse strain C57BL/6J (56 days, male) 14.4
70813251 Antisense, RP_050712_03_E03, Mouse strain C57BL/6J (56 days, male) 2.4
Pallidum
Expression energy: 7.0
68668024 Antisense, RP_050203_01_C07, Mouse strain C57BL/6J (56 days, male) 12.3
70813251 Antisense, RP_050712_03_E03, Mouse strain C57BL/6J (56 days, male) 1.7

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