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BRAIN CEREBELLUM Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS MEDULLA OBLONGATA
MIDBRAIN OLFACTORY BULB PITUITARY GLAND PONS RETINA SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
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VALIDATION
Brain proteome
Cerebellum
CEREBELLUM - Expression summary
Protein expression
Cerebellumi

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Bergmann glia - cytoplasm/membrane: Not detected
Bergmann glia - nucleus: Not detected
GLUC cells - cytoplasm/membrane: Not detected
GLUC cells - nucleus: Not detected
Granular cells - cytoplasm/membrane: Low
Granular cells - nucleus: Low
Molecular layer - neuropil: Not detected
Molecular layer cells - cytoplasm/membrane: Not detected
Molecular layer cells - nucleus: Medium
Processes in granular layer: Not detected
Processes in molecular layer: Not detected
Processes in white matter: Not detected
Purkinje cells - cytoplasm/membrane: High
Purkinje cells - dendrites: High
Purkinje cells - nucleus: Not detected
Synaptic glomeruli - capsule: Not detected
Synaptic glomeruli - core: Not detected
White matter cells - cytoplasm/membrane: Not detected
White matter cells - nucleus: Not detected
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:137.4 nTPM
HPA Brain:152.3 nTPM
GTEx:137.4 nTPM
FANTOM5:247.7 Scaled Tags Per Million
Pig:117.6 nTPM
Mouse:46.0 nTPM
Allen mouse:4.7 Expression energy

CEREBELLUM - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA018883
Bergmann glia - cytoplasm/membrane Not detected
Bergmann glia - nucleus Not detected
GLUC cells - cytoplasm/membrane Not detected
GLUC cells - nucleus Not detected
Purkinje cells - cytoplasm/membrane High
Purkinje cells - dendrites High
Purkinje cells - nucleus Not detected
Granular cells - cytoplasm/membrane Low
Granular cells - nucleus Low
Molecular layer - neuropil Not detected
Molecular layer cells - cytoplasm/membrane Not detected
Molecular layer cells - nucleus Medium
Processes in granular layer Not detected
Processes in molecular layer Not detected
Processes in white matter Not detected
Synaptic glomeruli - capsule Not detected
Synaptic glomeruli - core Not detected
White matter cells - cytoplasm/membrane Not detected
White matter cells - nucleus Not detected



CEREBELLUM - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

152.3
Sample id Sample description nTPM
Cerebellar cortex
nTPM: 136.7
1774 Male, age 80, left hemisphere 167.3
1768 Female, age 72, unknown 163.8
1769 Male, age 76, right hemisphere 144.5
1788 Male, age 55, unknown 135.9
2003 Female, age 85, right hemisphere 128.4
2055 Female, age 91, right hemisphere 125.6
2006 Male, age 61, right hemisphere 115.2
2101 Male, age 74, right hemisphere 112.8
Cerebellar nuclei
nTPM: 105.4
2882 Male, age 76, left hemisphere 133.4
2318 Male, age 74, left hemisphere 110.3
2005 Male, age 80, left hemisphere 105.4
1871 Male, age 74, unknown 104.2
2175 Male, age 61, right hemisphere 104.1
1879 Male, age 55, unknown 101.2
2783 Female, age 72, unknown 98.6
2177 Female, age 85, both hemispheres 95.9
1966 Female, age 91, left hemisphere 95.3
Flocculonodular lobe
nTPM: 152.3
1771 Male, age 80, left hemisphere 187.2
1765 Male, age 55, unknown 162.9
1835 Female, age 85, right hemisphere 149.6
2004 Male, age 61, right hemisphere 149.6
1792 Male, age 74, unknown 148.6
1767 Male, age 76, left hemisphere 143.8
2176 Female, age 91, right hemisphere 124.2
Vermis
nTPM: 142.0
1778 Female, age 91, left hemisphere 160.0
1988 Female, age 85, left hemisphere 150.2
1751 Male, age 74, right hemisphere 149.7
1766 Male, age 55, unknown 148.8
1770 Male, age 76, left hemisphere 146.3
1825 Male, age 74, unknown 146.1
1928 Female, age 72, unknown 127.2
2834 Male, age 80, left hemisphere 126.3
2460 Male, age 61, both hemispheres 123.1

CEREBELLUM - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

137.4
GTEx sample id Sample description nTPM
Brain - Cerebellar Hemisphere
Average nTPM: 123.6
Samples: 215

Max nTPM: 205.3
Min nTPM: 62.8
Std nTPM: 22.5
Median nTPM: 124.0
GTEX-13FLV-0011-R11a-SM-5LZZ7 50-59 years, male 205.3
GTEX-N7MS-0011-R11A-SM-2HMJS 60-69 years, male 196.1
GTEX-NL4W-0011-R11A-SM-2I3DW 50-59 years, male 179.6
GTEX-1313W-0011-R11a-SM-5DUXN 50-59 years, female 175.2
GTEX-NL3H-0011-R11A-SM-2I3E6 60-69 years, male 168.4
GTEX-1B933-0011-R11a-SM-7P8PM 50-59 years, female 168.2
GTEX-139TT-0011-R11b-SM-5LZV1 60-69 years, male 167.9
GTEX-13SLX-0011-R11b-SM-5O9C8 50-59 years, female 165.2
GTEX-13X6J-0011-R11a-SM-5P9HE 50-59 years, male 163.6
GTEX-145MH-0011-R11a-SM-5P9HQ 50-59 years, male 163.0
GTEX-1GN73-0011-R11b-SM-9OSX4 60-69 years, male 161.9
GTEX-NPJ8-0011-R11A-SM-2YUMS 40-49 years, male 160.6
GTEX-14E6D-0011-R11b-SM-664NP 50-59 years, male 159.1
GTEX-13PVQ-0011-R11a-SM-5O9DU 50-59 years, male 158.1
GTEX-1C64N-0011-R11b-SM-7P8Q6 50-59 years, male 157.6
GTEX-145LU-0011-R11b-SM-5P9JX 50-59 years, male 155.2
GTEX-13G51-0011-R11b-SM-5J2NE 60-69 years, male 155.0
GTEX-13VXU-0011-R11b-SM-5O9DJ 50-59 years, male 153.6
GTEX-13FXS-0011-R11a-SM-5L3DM 50-59 years, male 152.5
GTEX-14ABY-0011-R11a-SM-5SI7C 50-59 years, male 151.3
GTEX-13S7M-0011-R11b-SM-5P9HU 60-69 years, female 150.5
GTEX-13JVG-0011-R11a-SM-5KM53 60-69 years, male 150.0
GTEX-1ICLZ-0011-R11a-SM-CJI3N 60-69 years, male 149.9
GTEX-13OW7-0011-R11a-SM-5O9DY 50-59 years, male 149.5
GTEX-132Q8-0011-R11b-SM-5DUW9 60-69 years, male 149.3
GTEX-12WSD-0011-R11a-SM-9OSVC 60-69 years, female 149.3
GTEX-13OW6-0011-R11a-SM-5L3H2 50-59 years, male 148.3
GTEX-13OVH-0011-R11b-SM-5KM4X 70-79 years, male 148.0
GTEX-13O3O-0011-R11b-SM-5KM4G 60-69 years, female 147.6
GTEX-13OVJ-0011-R11a-SM-5P9H8 50-59 years, female 147.3
GTEX-1EMGI-0011-R11b-SM-9OSWX 60-69 years, male 147.0
GTEX-NPJ7-0011-R11A-SM-2I3E8 60-69 years, female 146.5
GTEX-YJ89-0011-R11a-SM-4SOKA 60-69 years, male 146.3
GTEX-13RTJ-0011-R11a-SM-5O9CK 60-69 years, male 145.6
GTEX-18A6Q-0011-R11a-SM-72D6H 60-69 years, male 145.2
GTEX-1CB4G-0011-R11a-SM-9OSWG 60-69 years, male 145.0
GTEX-1HBPI-0011-R11b-SM-CE6SH 50-59 years, male 144.4
GTEX-1HFI6-0011-R11b-SM-A96RU 40-49 years, male 144.4
GTEX-1IY9M-0011-R11b-SM-A96TI 60-69 years, male 143.2
GTEX-12WSH-0011-R11a-SM-5LZVM 50-59 years, male 142.6
GTEX-12WSE-0011-R11b-SM-5P9JW 20-29 years, male 142.3
GTEX-1H3O1-0011-R11a-SM-A96RV 60-69 years, male 142.1
GTEX-1F6I4-0011-R11b-SM-9OSWS 60-69 years, male 141.9
GTEX-1H4P4-0011-R11b-SM-CE6S8 50-59 years, male 140.9
GTEX-P44G-0011-R11A-SM-2I3FD 30-39 years, male 140.7
GTEX-WZTO-0011-R11A-SM-4E3K9 40-49 years, male 140.3
GTEX-1F52S-0011-R11a-SM-CJI23 60-69 years, female 139.8
GTEX-1I1GV-0011-R11a-SM-CJI3Z 60-69 years, male 139.3
GTEX-13FHP-0011-R11b-SM-5LZXP 50-59 years, male 138.9
GTEX-145MI-0011-R11a-SM-5P9JZ 60-69 years, female 138.9
GTEX-11OF3-0011-R11a-SM-57WCR 60-69 years, male 138.7
GTEX-1IKK5-0011-R11a-SM-C1YRX 60-69 years, male 137.2
GTEX-1I1HK-0011-R11a-SM-B2LVN 60-69 years, male 136.5
GTEX-13CF2-0011-R11b-SM-5LZXO 60-69 years, male 136.2
GTEX-Z93S-0011-R11a-SM-4RGNN 50-59 years, male 136.1
GTEX-13NZA-0011-R11b-SM-5KM4W 60-69 years, male 135.9
GTEX-X261-0011-R11A-SM-4E3JY 50-59 years, male 135.9
GTEX-1F7RK-0011-R11b-SM-9QEI2 20-29 years, female 135.6
GTEX-1H1CY-0011-R11a-SM-C1YQR 60-69 years, female 134.5
GTEX-15CHQ-0011-R11b-SM-686ZZ 60-69 years, male 134.4
GTEX-11GSP-0011-R11b-SM-5NQ7V 60-69 years, female 134.0
GTEX-1B8L1-0011-R11b-SM-793DJ 60-69 years, male 134.0
GTEX-13SLW-0011-R11a-SM-5SI8Q 70-79 years, male 133.8
GTEX-131YS-0011-R11b-SM-5EGLM 60-69 years, female 133.7
GTEX-13O3Q-0011-R11b-SM-5KM2W 50-59 years, male 133.6
GTEX-18465-0011-R11a-SM-72D78 50-59 years, male 133.4
GTEX-RVPV-0011-R11A-SM-2TF6F 60-69 years, male 133.1
GTEX-1F75A-0011-R11a-SM-AHZ35 50-59 years, male 133.0
GTEX-1GF9W-0011-R11b-SM-9OSXG 60-69 years, male 132.7
GTEX-144GL-0011-R11b-SM-5P9F6 50-59 years, male 132.4
GTEX-16GPK-0011-R11b-SM-7MKFF 60-69 years, male 132.4
GTEX-13N2G-0011-R11a-SM-5MR3F 60-69 years, male 132.2
GTEX-ZUA1-0011-R11b-SM-51MTI 40-49 years, male 131.8
GTEX-17JCI-0011-R11a-SM-7189Y 60-69 years, female 131.3
GTEX-1GMRU-0011-R11b-SM-C1YQ4 50-59 years, male 130.8
GTEX-1E1VI-0011-R11a-SM-9OSWI 50-59 years, male 130.7
GTEX-1GZ4I-0011-R11b-SM-9OSWR 50-59 years, male 130.7
GTEX-1GZHY-0011-R11a-SM-C1YRQ 50-59 years, female 130.7
GTEX-WL46-0011-R11A-SM-3MJFT 50-59 years, male 130.5
GTEX-1EKGG-0011-R11a-SM-9QEHZ 60-69 years, male 130.5
GTEX-11WQC-0011-R11b-SM-57WD6 60-69 years, male 130.1
GTEX-13OVL-0011-R11b-SM-5L3G7 50-59 years, male 129.8
GTEX-1IDJH-0011-R11b-SM-C1YRT 70-79 years, male 129.7
GTEX-Q2AG-0011-R11A-SM-2HMKZ 40-49 years, female 128.7
GTEX-1B8SF-0011-R11a-SM-79OOP 60-69 years, male 128.4
GTEX-WHSE-0011-R11A-SM-3P5YY 20-29 years, male 128.1
GTEX-1KD4Q-0011-R11b-SM-EXOIE 40-49 years, male 128.0
GTEX-ZVZQ-0011-R11a-SM-51MS6 60-69 years, female 127.8
GTEX-14ASI-0011-R11b-SM-6AJBJ 60-69 years, male 127.6
GTEX-12WSI-0011-R11b-SM-5P9EZ 50-59 years, male 127.2
GTEX-1HGF4-0011-R11a-SM-C1YRR 60-69 years, male 126.8
GTEX-13X6K-0011-R11a-SM-5P9F5 60-69 years, female 126.5
GTEX-1HSKV-0011-R11b-SM-AHZ2E 60-69 years, male 126.5
GTEX-18464-0011-R11a-SM-72D76 50-59 years, male 126.4
GTEX-14PN4-0011-R11a-SM-686ZW 50-59 years, male 125.9
GTEX-1N2DW-0011-R11b-SM-EXOIL 50-59 years, male 125.9
GTEX-1399T-0011-R11a-SM-5J2O1 60-69 years, male 125.7
GTEX-13NYB-0011-R11a-SM-5KM3Q 40-49 years, male 125.7
GTEX-13X6I-0011-R11a-SM-5P9HN 60-69 years, male 125.7
GTEX-13QIC-0011-R11b-SM-5O9BU 60-69 years, female 125.6
GTEX-1LSVX-0011-R11b-SM-EXOIA 60-69 years, male 125.3
GTEX-12ZZZ-0011-R11a-SM-5EGLC 60-69 years, male 125.2
GTEX-S7SE-0011-R11A-SM-2XCDD 50-59 years, male 124.9
GTEX-1BAJH-0011-R11b-SM-7IGLM 70-79 years, male 124.8
GTEX-1HCU6-0011-R11b-SM-AHZ2F 60-69 years, female 124.8
GTEX-X4XX-0011-R11A-SM-46MWQ 60-69 years, male 124.2
GTEX-12WSF-0011-R11a-SM-5LZVT 70-79 years, male 124.1
GTEX-1I1GR-0011-R11a-SM-CM2T5 60-69 years, male 124.0
GTEX-13FHO-0011-R11b-SM-5LZYQ 60-69 years, male 123.3
GTEX-R55E-0011-R11A-SM-2TC6I 20-29 years, male 123.3
GTEX-12WSM-0011-R11a-SM-5DUX8 60-69 years, male 122.7
GTEX-13NYS-0011-R11b-SM-5MR4P 60-69 years, male 122.3
GTEX-1H1ZS-0011-R11a-SM-C1YQM 70-79 years, male 122.2
GTEX-1J8Q2-0011-R11a-SM-A9SKI 60-69 years, male 122.1
GTEX-131XH-0011-R11a-SM-5EGLN 50-59 years, male 121.8
GTEX-11H98-0011-R11b-SM-5NQ6U 50-59 years, male 121.6
GTEX-1GMR8-0011-R11b-SM-9OSX2 50-59 years, female 121.6
GTEX-11DYG-0011-R11a-SM-DNZZP 60-69 years, male 120.8
GTEX-1F48J-0011-R11b-SM-9OSWV 50-59 years, female 120.5
GTEX-1HB9E-0011-R11b-SM-ARU79 50-59 years, male 120.0
GTEX-WWYW-0011-R11A-SM-3NB38 50-59 years, female 119.9
GTEX-ZDXO-0011-R11a-SM-4WWD9 60-69 years, male 119.5
GTEX-12ZZX-0011-R11a-SM-5DUVJ 40-49 years, female 119.2
GTEX-ZVT3-0011-R11b-SM-57WBI 60-69 years, female 118.9
GTEX-1I1GS-0011-R11a-SM-C1YRU 60-69 years, male 118.6
GTEX-1M4P7-0011-R11b-SM-EXOIK 60-69 years, male 118.5
GTEX-1GTWX-0011-R11b-SM-C1YQJ 60-69 years, male 118.2
GTEX-1B8SG-0011-R11a-SM-7P8PF 50-59 years, male 118.1
GTEX-15ER7-0011-R11a-SM-6LPIL 20-29 years, female 117.6
GTEX-1AX9I-0011-R11b-SM-7DHN4 60-69 years, male 117.6
GTEX-YFC4-0011-R11a-SM-4SOK6 40-49 years, female 117.6
GTEX-1IL2V-0011-R11a-SM-ARU6T 70-79 years, male 117.4
GTEX-OHPN-0011-R11A-SM-2I5FM 60-69 years, female 117.2
GTEX-TSE9-0011-R11A-SM-3DB7N 60-69 years, female 117.2
GTEX-WVLH-0011-R11A-SM-3MJFO 50-59 years, male 116.8
GTEX-ZE9C-0011-R11a-SM-4WKGG 60-69 years, male 116.6
GTEX-11ZUS-0011-R11b-SM-5BC7B 30-39 years, male 116.3
GTEX-XMD1-0011-R11A-SM-4AT5J 60-69 years, male 116.3
GTEX-13PLJ-0011-R11b-SM-5O9BS 60-69 years, female 116.0
GTEX-13FTY-0011-R11a-SM-5IJEA 40-49 years, female 115.4
GTEX-1IGQW-0011-R11a-SM-C1YRV 60-69 years, male 115.1
GTEX-13OW8-0011-R11a-SM-5L3GT 60-69 years, male 115.0
GTEX-1JMQJ-0011-R11a-SM-EXOJY 50-59 years, male 114.9
GTEX-14BIN-0011-R11a-SM-5SI79 50-59 years, female 114.8
GTEX-11PRG-0011-R11b-SM-DNZZY 50-59 years, male 114.8
GTEX-1LG7Y-0011-R11a-SM-EXOIH 50-59 years, male 114.6
GTEX-1A3MX-0011-R11b-SM-7DUGP 60-69 years, male 114.2
GTEX-1H1DG-0011-R11a-SM-C1YQK 70-79 years, male 114.0
GTEX-1H3VE-0011-R11b-SM-C1YRP 40-49 years, male 113.7
GTEX-1N2EE-0011-R11b-SM-EXOIJ 60-69 years, male 113.0
GTEX-1J8EW-0011-R11a-SM-AHZ37 60-69 years, female 112.7
GTEX-15G19-0011-R11b-SM-6LPIH 60-69 years, male 112.4
GTEX-1H3NZ-0011-R11b-SM-CE6SF 60-69 years, male 112.2
GTEX-Y8DK-0011-R11A-SM-4SOK2 60-69 years, male 111.9
GTEX-11DXY-0011-R11a-SM-DNZZN 60-69 years, male 111.8
GTEX-131XW-0011-R11a-SM-5DUV9 50-59 years, female 110.9
GTEX-ZAB4-0011-R11a-SM-4SOKI 40-49 years, male 110.7
GTEX-17EVQ-0011-R11a-SM-7LT9C 70-79 years, male 110.5
GTEX-X4EP-0011-R11B-SM-4QASK 60-69 years, female 110.0
GTEX-ZE7O-0011-R11a-SM-57WBC 50-59 years, female 109.8
GTEX-1F75W-0011-R11b-SM-AHZ34 60-69 years, male 109.2
GTEX-11DZ1-0011-R11b-SM-DO11W 50-59 years, male 108.8
GTEX-11EMC-0011-R11b-SM-DNZZK 60-69 years, female 108.8
GTEX-1IL2U-0011-R11a-SM-CE6SO 60-69 years, male 108.5
GTEX-1J1OQ-0011-R11a-SM-A96S3 40-49 years, female 108.3
GTEX-1I1GQ-0011-R11b-SM-CKZPA 50-59 years, male 108.1
GTEX-12126-0011-R11a-SM-5BC6X 20-29 years, male 107.8
GTEX-17EVP-0011-R11a-SM-7EWDL 40-49 years, male 107.0
GTEX-14DAQ-0011-R11a-SM-664NO 60-69 years, female 106.8
GTEX-11ZTS-0011-R11a-SM-DO113 60-69 years, female 106.7
GTEX-13JUV-0011-R11a-SM-5LZYH 40-49 years, female 106.2
GTEX-14C5O-0011-R11b-SM-6872H 60-69 years, male 106.0
GTEX-P44H-0011-R11A-SM-2XCER 40-49 years, male 105.9
GTEX-1IOXB-0011-R11a-SM-A9G1X 50-59 years, male 104.5
GTEX-UTHO-0011-R11A-SM-3GIJE 60-69 years, male 104.1
GTEX-1HUB1-0011-R11b-SM-CE6SC 60-69 years, male 103.9
GTEX-RU72-0011-R11A-SM-CM2U1 50-59 years, female 103.9
GTEX-17HII-0011-R11b-SM-7KFSX 50-59 years, male 103.4
GTEX-14BIM-0011-R11b-SM-5S2RN 60-69 years, female 103.1
GTEX-183WM-0011-R11a-SM-718A5 70-79 years, female 103.0
GTEX-15DYW-0011-R11a-SM-6LPIT 60-69 years, female 102.7
GTEX-ZF28-0011-R11a-SM-4WWEI 60-69 years, male 102.6
GTEX-16NPV-0011-R11a-SM-7IGMK 50-59 years, female 102.0
GTEX-1JJEA-0011-R11a-SM-EXUTE 60-69 years, male 101.1
GTEX-T6MN-0011-R11A-SM-32QOX 50-59 years, male 100.8
GTEX-14E7W-0011-R11a-SM-5ZZVA 70-79 years, male 100.4
GTEX-13OW5-0011-R11b-SM-5L3GG 60-69 years, male 100.0
GTEX-139UW-0011-R11a-SM-5IJGN 60-69 years, male 99.3
GTEX-QMR6-0011-R11A-SM-32PKK 50-59 years, male 98.8
GTEX-11EI6-0011-R11a-SM-DO11V 60-69 years, male 98.8
GTEX-17F97-0011-R11b-SM-7KFRQ 50-59 years, male 98.7
GTEX-16YQH-0011-R11b-SM-7LT98 30-39 years, male 98.5
GTEX-T2IS-0011-R11A-SM-32QPC 20-29 years, female 98.5
GTEX-15EO6-0011-R11b-SM-6M47M 50-59 years, male 97.5
GTEX-1R9K4-0011-R11a-SM-EZ6N9 60-69 years, male 95.6
GTEX-17HG3-0011-R11b-SM-7KFT4 30-39 years, female 94.8
GTEX-13CZV-0011-R11b-SM-5N9FN 60-69 years, male 94.2
GTEX-16XZZ-0011-R11a-SM-7EPI3 60-69 years, male 93.1
GTEX-15DCD-0011-R11a-SM-D4P1R 70-79 years, female 92.8
GTEX-X585-0011-R11B-SM-46MUZ 50-59 years, male 92.4
GTEX-1R9PO-0011-R11b-SM-EZ6NB 60-69 years, female 91.2
GTEX-12WSC-0011-R11a-SM-5GU5J 50-59 years, male 90.7
GTEX-QDT8-0011-R11A-SM-32PKD 30-39 years, female 90.3
GTEX-14C39-0011-R11b-SM-5YYAF 40-49 years, male 88.9
GTEX-1I19N-0011-R11b-SM-ARU6Y 70-79 years, male 86.1
GTEX-1CAV2-0011-R11a-SM-ARU8D 40-49 years, female 84.7
GTEX-1JMOU-0011-R11b-SM-EXUTA 60-69 years, female 84.6
GTEX-1IKOH-0011-R11a-SM-AHZ38 60-69 years, female 84.5
GTEX-11TTK-0011-R11b-SM-DO112 60-69 years, female 75.9
GTEX-1LKK1-0011-R11a-SM-EXOIG 50-59 years, female 75.3
GTEX-1LVAO-0011-R11b-SM-EXOI8 60-69 years, male 74.8
GTEX-T5JC-0011-R11A-SM-32PMB 20-29 years, male 73.5
GTEX-1JJ6O-0011-R11b-SM-EXUS2 60-69 years, male 67.7
GTEX-16Z82-0011-R11a-SM-79OKJ 60-69 years, male 67.1
GTEX-N7MT-0011-R11A-SM-2I3DZ 60-69 years, female 62.8
Show allShow less
Brain - Cerebellum
Average nTPM: 137.4
Samples: 241

Max nTPM: 192.0
Min nTPM: 80.1
Std nTPM: 19.5
Median nTPM: 136.6
GTEX-11OC5-0626-SM-5HL6M 60-69 years, male 192.0
GTEX-1I1CD-2926-SM-A96SJ 60-69 years, female 183.4
GTEX-1GN73-3026-SM-7MXV8 60-69 years, male 177.7
GTEX-12WSD-3026-SM-5LZU7 60-69 years, female 174.3
GTEX-12ZZZ-3126-SM-5LZU6 60-69 years, male 173.7
GTEX-13OW7-2926-SM-5MR3Z 50-59 years, male 173.5
GTEX-1192X-3226-SM-5987D 50-59 years, male 173.3
GTEX-139TT-2626-SM-5LZUB 60-69 years, male 172.5
GTEX-1B8L1-3226-SM-7P8OX 60-69 years, male 170.6
GTEX-Y111-2826-SM-4TT3O 50-59 years, male 170.0
GTEX-1B8SG-1926-SM-73KUB 50-59 years, male 169.5
GTEX-13O3O-3026-SM-5KM42 60-69 years, female 169.1
GTEX-13FXS-3026-SM-5LZYO 50-59 years, male 168.9
GTEX-11NUK-3026-SM-5986K 50-59 years, male 168.2
GTEX-13NYB-3226-SM-5J2ND 40-49 years, male 168.0
GTEX-WL46-2826-SM-3LK81 50-59 years, male 168.0
GTEX-N7MS-2526-SM-2D7W3 60-69 years, male 167.8
GTEX-11GSP-3126-SM-5A5LL 60-69 years, female 166.3
GTEX-X261-3126-SM-4PQZC 50-59 years, male 166.3
GTEX-YJ89-2926-SM-5P9IT 60-69 years, male 164.7
GTEX-13VXU-3026-SM-5LU3K 50-59 years, male 164.6
GTEX-12ZZY-2926-SM-5DUXO 60-69 years, male 164.4
GTEX-13OVH-2926-SM-5IJFH 70-79 years, male 163.8
GTEX-13O3Q-3026-SM-5IJGD 50-59 years, male 163.7
GTEX-11ZUS-2826-SM-5EQKW 30-39 years, male 163.3
GTEX-14ABY-3026-SM-664NE 50-59 years, male 162.9
GTEX-13S7M-3026-SM-5S2QQ 60-69 years, female 162.5
GTEX-13JVG-3226-SM-5IJGJ 60-69 years, male 162.1
GTEX-Z93S-2826-SM-57WBL 50-59 years, male 161.9
GTEX-ZAK1-2926-SM-5HL9S 50-59 years, female 161.4
GTEX-1H3O1-1826-SM-A96TO 60-69 years, male 161.3
GTEX-1LSVX-2826-SM-EVR58 60-69 years, male 159.5
GTEX-13G51-3126-SM-5IJG7 60-69 years, male 159.2
GTEX-12WSH-3126-SM-5LZW8 50-59 years, male 159.0
GTEX-NPJ8-2626-SM-2D7W2 40-49 years, male 158.9
GTEX-13PVQ-2926-SM-5L3HJ 50-59 years, male 158.5
GTEX-14E6D-2926-SM-664OP 50-59 years, male 158.3
GTEX-14PN4-3026-SM-664O4 50-59 years, male 158.1
GTEX-1C6VR-3026-SM-7IGLW 60-69 years, male 157.7
GTEX-131YS-3026-SM-5EGHY 60-69 years, female 157.6
GTEX-ZUA1-2926-SM-59HL3 40-49 years, male 157.6
GTEX-1313W-3026-SM-5LZUZ 50-59 years, female 157.5
GTEX-12WSC-2926-SM-5BC5Z 50-59 years, male 157.4
GTEX-13112-2926-SM-5DUWT 50-59 years, male 157.0
GTEX-11ONC-3026-SM-5985W 60-69 years, male 156.3
GTEX-T6MN-2526-SM-32PMN 50-59 years, male 156.2
GTEX-1HBPI-2726-SM-9WPPF 50-59 years, male 155.5
GTEX-117XS-3126-SM-5GIDP 60-69 years, male 155.1
GTEX-13OVJ-2726-SM-5IJG6 50-59 years, female 154.6
GTEX-12WSM-2126-SM-5GCOC 60-69 years, male 154.5
GTEX-1JMQJ-3126-SM-EV79G 50-59 years, male 154.4
GTEX-12WSE-2926-SM-5RQJ9 20-29 years, male 153.2
GTEX-R55E-2526-SM-2TC6H 20-29 years, male 153.2
GTEX-13OVL-3026-SM-5IJF1 50-59 years, male 152.7
GTEX-1EMGI-3126-SM-7MXUR 60-69 years, male 152.7
GTEX-14JIY-2326-SM-6AJAJ 60-69 years, male 152.6
GTEX-1C6WA-3326-SM-7MKGN 60-69 years, male 152.6
GTEX-1HSKV-2926-SM-B2LWJ 60-69 years, male 152.6
GTEX-13N2G-3126-SM-5IJGL 60-69 years, male 152.5
GTEX-1399T-3126-SM-5IJFS 60-69 years, male 152.4
GTEX-11DXY-3126-SM-5N9BT 60-69 years, male 152.3
GTEX-1C64N-3126-SM-79OO3 50-59 years, male 152.3
GTEX-1JMQK-2926-SM-D4P2T 60-69 years, male 151.9
GTEX-13QIC-3026-SM-5LU58 60-69 years, female 151.8
GTEX-13OW6-2926-SM-5KM29 50-59 years, male 151.3
GTEX-145MF-2826-SM-7EPGU 50-59 years, male 151.3
GTEX-1H4P4-2726-SM-9JGGB 50-59 years, male 150.8
GTEX-14JFF-2826-SM-6871Q 60-69 years, male 150.7
GTEX-13FHP-2926-SM-5IJG9 50-59 years, male 150.6
GTEX-13SLX-3226-SM-5YYA6 50-59 years, female 150.4
GTEX-17EVQ-2726-SM-7EWDT 70-79 years, male 150.1
GTEX-1RDX4-3226-SM-DPS14 50-59 years, female 149.7
GTEX-1JMLX-3026-SM-EV79Q 50-59 years, male 148.5
GTEX-1F75A-2926-SM-7MXVN 50-59 years, male 148.3
GTEX-11ZTS-3226-SM-5EGID 60-69 years, female 146.2
GTEX-1E1VI-2926-SM-7IGLT 50-59 years, male 145.9
GTEX-139TS-3126-SM-5LZWX 60-69 years, male 145.7
GTEX-14BIN-3326-SM-5Q5E6 50-59 years, female 145.7
GTEX-1F75W-3126-SM-7P8SJ 60-69 years, male 145.6
GTEX-15EO6-2926-SM-6M48D 50-59 years, male 144.8
GTEX-ZDXO-2926-SM-4WKFM 60-69 years, male 144.8
GTEX-ZVT3-2926-SM-5GU6M 60-69 years, female 144.5
GTEX-14E7W-2926-SM-5S2R8 70-79 years, male 144.3
GTEX-1JN1M-3126-SM-AHZ4E 60-69 years, female 144.3
GTEX-111FC-3326-SM-5GZYV 60-69 years, male 144.2
GTEX-YFC4-3026-SM-5IFJK 40-49 years, female 144.2
GTEX-12126-0926-SM-5FQTW 20-29 years, male 143.7
GTEX-17JCI-3026-SM-7EWDR 60-69 years, female 143.7
GTEX-1GZHY-3026-SM-7MXVA 50-59 years, female 143.7
GTEX-13RTJ-3126-SM-5S2Q4 60-69 years, male 143.4
GTEX-1H1ZS-2926-SM-9WPP2 70-79 years, male 143.3
GTEX-12ZZX-2826-SM-5BC6K 40-49 years, female 143.2
GTEX-1B996-2926-SM-7MXUH 60-69 years, male 143.0
GTEX-1IY9M-3126-SM-AHZ3A 60-69 years, male 142.7
GTEX-XLM4-2926-SM-4AT59 60-69 years, male 142.5
GTEX-TSE9-2926-SM-3DB77 60-69 years, female 142.1
GTEX-14JG1-2926-SM-686ZK 40-49 years, male 141.6
GTEX-14ASI-2926-SM-5Q5DG 60-69 years, male 141.5
GTEX-Q2AG-2826-SM-2HMJQ 40-49 years, female 141.5
GTEX-1I1GV-3026-SM-CNNR9 60-69 years, male 141.5
GTEX-11DYG-2926-SM-5H132 60-69 years, male 141.2
GTEX-17EVP-2926-SM-793BU 40-49 years, male 140.8
GTEX-1MJK2-3026-SM-EV7A5 50-59 years, male 140.8
GTEX-1PIIG-2826-SM-DTX7O 30-39 years, male 140.4
GTEX-1A8G6-3126-SM-731D8 60-69 years, male 140.3
GTEX-1128S-2826-SM-5N9DI 60-69 years, female 139.0
GTEX-ZAJG-3026-SM-5HL92 50-59 years, female 138.7
GTEX-11PRG-2826-SM-5BC54 50-59 years, male 138.6
GTEX-WVLH-2926-SM-3MJG5 50-59 years, male 138.2
GTEX-1EKGG-3126-SM-9WPO5 60-69 years, male 138.2
GTEX-145MH-2926-SM-5Q5D2 50-59 years, male 138.0
GTEX-16YQH-2926-SM-6LPJE 30-39 years, male 137.9
GTEX-1NV8Z-3026-SM-DTX8Z 60-69 years, male 137.7
GTEX-11DXW-1026-SM-5H11K 40-49 years, male 137.3
GTEX-11GSO-3026-SM-5Q5AL 60-69 years, male 137.3
GTEX-PWO3-1026-SM-2I5F2 60-69 years, female 137.2
GTEX-11NV4-2226-SM-5BC4T 60-69 years, male 137.1
GTEX-11EMC-3326-SM-5P9JH 60-69 years, female 137.0
GTEX-15ER7-3026-SM-6M47W 20-29 years, female 136.8
GTEX-UTHO-2926-SM-3P5Z9 60-69 years, male 136.8
GTEX-1IDJH-3126-SM-C1YQS 70-79 years, male 136.6
GTEX-1H1CY-3026-SM-9OSW7 60-69 years, female 136.4
GTEX-13X6K-2826-SM-5O9DS 60-69 years, female 136.3
GTEX-11DZ1-2926-SM-5A5KI 50-59 years, male 136.2
GTEX-131XH-2926-SM-5LZU4 50-59 years, male 135.5
GTEX-1F48J-2726-SM-7P8PW 50-59 years, female 135.4
GTEX-145MG-3126-SM-5Q5D3 50-59 years, male 135.3
GTEX-1HSMO-2926-SM-C1YR5 60-69 years, male 135.3
GTEX-11ZVC-3026-SM-59HJM 50-59 years, female 135.2
GTEX-1A3MX-2926-SM-718B7 60-69 years, male 135.2
GTEX-1H1DG-2826-SM-9JGHB 70-79 years, male 134.7
GTEX-ZZPT-2926-SM-5EQ5S 50-59 years, male 134.6
GTEX-14BMV-2926-SM-5TDEE 50-59 years, male 134.4
GTEX-1GTWX-2926-SM-7MXV4 60-69 years, male 134.4
GTEX-15G19-2826-SM-6M48K 60-69 years, male 134.3
GTEX-OHPN-2626-SM-2I5H1 60-69 years, female 134.3
GTEX-ZYY3-3026-SM-5GIEJ 60-69 years, female 134.3
GTEX-13CF2-3026-SM-5IFFX 60-69 years, male 134.1
GTEX-147GR-3126-SM-5S2PM 60-69 years, male 134.0
GTEX-X4XX-2926-SM-3NMB1 60-69 years, male 134.0
GTEX-17HG3-2826-SM-7EPGO 30-39 years, female 133.9
GTEX-14PJM-3026-SM-6LLHM 50-59 years, female 133.7
GTEX-1B8SF-3026-SM-731DX 60-69 years, male 133.6
GTEX-ZAB4-2926-SM-57WCV 40-49 years, male 133.5
GTEX-18465-2926-SM-7KFSE 50-59 years, male 133.4
GTEX-1GF9V-3026-SM-7P8R8 60-69 years, male 133.3
GTEX-1JJEA-2926-SM-C1YSK 60-69 years, male 133.3
GTEX-1CB4G-2926-SM-7MKFQ 60-69 years, male 133.1
GTEX-Y8DK-0726-SM-4TT3S 60-69 years, male 132.6
GTEX-17F97-2926-SM-7DUEQ 50-59 years, male 132.4
GTEX-13OW8-2926-SM-5L3FV 60-69 years, male 132.2
GTEX-1LG7Y-3126-SM-EV7AS 50-59 years, male 132.2
GTEX-X4EP-3026-SM-3P5YP 60-69 years, female 131.8
GTEX-144GL-2926-SM-5O99F 50-59 years, male 131.7
GTEX-1POEN-2726-SM-E9U6B 30-39 years, female 131.6
GTEX-WZTO-2826-SM-3NM8P 40-49 years, male 131.1
GTEX-17HHY-2926-SM-79OJW 50-59 years, male 130.9
GTEX-1JMPZ-2826-SM-C1YRA 30-39 years, male 130.8
GTEX-1EU9M-2926-SM-793DF 60-69 years, male 130.5
GTEX-1B933-3026-SM-731DB 50-59 years, female 130.2
GTEX-QDT8-3026-SM-32PKB 30-39 years, female 130.0
GTEX-183WM-2726-SM-7KFRF 70-79 years, female 129.2
GTEX-QVJO-1325-SM-2S1QX 60-69 years, female 129.2
GTEX-1IL2V-3026-SM-CYPSA 70-79 years, male 129.0
GTEX-145LU-2626-SM-5LU9Z 50-59 years, male 128.8
GTEX-1KWVE-2226-SM-CXZKN 30-39 years, male 128.8
GTEX-1QEPI-3026-SM-EXOIW 60-69 years, female 128.5
GTEX-XMD1-2826-SM-4AT5F 60-69 years, male 128.4
GTEX-S7SE-2526-SM-2XCDL 50-59 years, male 127.9
GTEX-T2IS-2926-SM-32QPO 20-29 years, female 127.6
GTEX-1E2YA-2926-SM-7MGWX 50-59 years, male 126.8
GTEX-ZF28-2926-SM-4WKG1 60-69 years, male 126.6
GTEX-1F52S-3026-SM-7P8PV 60-69 years, female 126.0
GTEX-RNOR-2226-SM-2TF5O 50-59 years, female 125.8
GTEX-1A8G7-3026-SM-73KTT 60-69 years, male 125.7
GTEX-1I1HK-2726-SM-AHZ2M 60-69 years, male 125.7
GTEX-NPJ7-2826-SM-2I3FU 60-69 years, female 125.6
GTEX-1HB9E-3126-SM-AHZ4M 50-59 years, male 125.6
GTEX-1R46S-3126-SM-DPRZ9 60-69 years, female 125.2
GTEX-1R9PO-2826-SM-E6CPV 60-69 years, female 124.7
GTEX-1KD4Q-3026-SM-EV7A7 40-49 years, male 124.2
GTEX-147F4-3026-SM-5Q5BJ 50-59 years, male 123.6
GTEX-WWYW-3026-SM-3NB36 50-59 years, female 123.1
GTEX-14A5I-2826-SM-5SIBF 50-59 years, female 122.9
GTEX-P44G-2526-SM-2I5EK 30-39 years, male 122.9
GTEX-11EI6-2926-SM-5985U 60-69 years, male 122.6
GTEX-13FHO-2926-SM-5L3ES 60-69 years, male 122.6
GTEX-1QP6S-3026-SM-EAZ4N 40-49 years, male 122.6
GTEX-1EX96-3126-SM-9JGGC 50-59 years, male 121.0
GTEX-13X6J-2926-SM-7EPGP 50-59 years, male 120.3
GTEX-1GZ4I-2926-SM-9JGGO 50-59 years, male 120.3
GTEX-18A6Q-2826-SM-7LTAO 60-69 years, male 120.1
GTEX-1F6IF-3026-SM-7P8QN 60-69 years, male 119.7
GTEX-1KANB-3226-SM-D4P3G 50-59 years, male 119.6
GTEX-1IKOH-2826-SM-CNNRC 60-69 years, female 119.5
GTEX-15SHU-3026-SM-6LPIB 40-49 years, female 119.4
GTEX-1EWIQ-3026-SM-7IGOJ 70-79 years, female 119.1
GTEX-ZYFD-2926-SM-5GID9 50-59 years, male 118.9
GTEX-13X6I-2926-SM-5Q5C3 60-69 years, male 118.6
GTEX-1J1OQ-3126-SM-D4P2O 40-49 years, female 118.6
GTEX-13OW5-3126-SM-5MR3Y 60-69 years, male 118.4
GTEX-15DYW-3026-SM-7KFRM 60-69 years, female 118.3
GTEX-1269C-3126-SM-5EGI6 60-69 years, female 118.1
GTEX-17HII-2926-SM-79OMK 50-59 years, male 118.0
GTEX-1PWST-3026-SM-EAZ3H 70-79 years, male 117.5
GTEX-145LS-3026-SM-5O99S 60-69 years, female 117.3
GTEX-P44H-2426-SM-2XCEJ 40-49 years, male 117.1
GTEX-14C39-3026-SM-5S2QE 40-49 years, male 115.5
GTEX-RU72-2926-SM-2TF66 50-59 years, female 115.3
GTEX-WHSE-2926-SM-3NMBG 20-29 years, male 114.9
GTEX-132Q8-2926-SM-5IFFP 60-69 years, male 114.6
GTEX-14PJO-2926-SM-686ZI 60-69 years, male 114.0
GTEX-14BIM-3126-SM-5Q5C7 60-69 years, female 113.3
GTEX-16Z82-2926-SM-6LPJJ 60-69 years, male 112.9
GTEX-1P4AB-3026-SM-EXOJS 50-59 years, male 112.6
GTEX-QMR6-1326-SM-32PLB 50-59 years, male 112.2
GTEX-PVOW-2626-SM-32PL8 40-49 years, male 111.9
GTEX-14DAQ-3026-SM-5S2QZ 60-69 years, female 111.6
GTEX-1GF9W-2726-SM-9JGGW 60-69 years, male 110.9
GTEX-16XZZ-2926-SM-6LPK4 60-69 years, male 110.2
GTEX-13JUV-3026-SM-5K7WX 40-49 years, female 109.9
GTEX-1RQEC-3026-SM-DPRXM 60-69 years, male 109.1
GTEX-1F6I4-3026-SM-7P8SI 60-69 years, male 109.0
GTEX-1HBPH-3026-SM-9WPNY 40-49 years, female 108.9
GTEX-11O72-2826-SM-5HL6W 40-49 years, male 108.6
GTEX-1BAJH-3126-SM-7MGXY 70-79 years, male 107.4
GTEX-1CB4H-3026-SM-79OLX 60-69 years, female 107.0
GTEX-1HCVE-2926-SM-9WPPJ 50-59 years, male 106.4
GTEX-14C5O-2926-SM-5RQI1 60-69 years, male 106.3
GTEX-11TTK-2826-SM-5GU5K 60-69 years, female 104.3
GTEX-QVUS-2926-SM-3GIJB 60-69 years, female 102.9
GTEX-1H3NZ-2926-SM-9WPQ8 60-69 years, male 102.6
GTEX-1RNSC-3126-SM-EVR4V 60-69 years, male 102.6
GTEX-1JMOU-2826-SM-EV79R 60-69 years, female 102.0
GTEX-1EH9U-3126-SM-7MXU5 60-69 years, male 101.5
GTEX-1JJ6O-3026-SM-C1YQH 60-69 years, male 98.3
GTEX-N7MT-1226-SM-DKPOK 60-69 years, female 96.4
GTEX-T5JC-2326-SM-32PMR 20-29 years, male 93.0
GTEX-1H3VE-2826-SM-9WPOL 40-49 years, male 90.1
GTEX-1GZ2Q-3026-SM-9JGG3 40-49 years, male 88.6
GTEX-1JJE9-3026-SM-CNNPA 70-79 years, male 80.1
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CEREBELLUM - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

247.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Cerebellum
Scaled Tags Per Million: 247.7
FF:10166-103B4 76 years, female 285.8
FF:10083-102B2 22-68 years, mixed 209.6

CEREBELLUM - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

117.6
Pig sample Sample description nTPM
Cerebellum
nTPM: 117.6
Samples: 4

Max nTPM: 155.3
Min nTPM: 93.1
Sample A Female 155.3
Sample B Female 107.6
Sample C Male 93.1
Sample D Male 114.3

CEREBELLUM - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

46.0
Mouse sample Sample description nTPM
Cerebellum
nTPM: 46.0
Samples: 4

Max nTPM: 51.1
Min nTPM: 42.6
Sample A Male 51.1
Sample B Male 43.6
Sample C Female 46.7
Sample D Female 42.6

CEREBELLUM - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

4.7
Allen experiment id Experiment description Expression energy
Cerebellum
Expression energy: 4.7
68668024 Antisense, RP_050203_01_C07, Mouse strain C57BL/6J (56 days, male) 7.7
70813251 Antisense, RP_050712_03_E03, Mouse strain C57BL/6J (56 days, male) 1.8

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