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NDUFS5
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  • NDUFS5
TISSUE PRIMARY DATA CAUDATE Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM
ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MIDBRAIN NASOPHARYNX
ORAL MUCOSA OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE
SMOOTH MUSCLE SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
ANTIBODIES
AND
VALIDATION
Dictionary
Caudate
Tissue proteome
CAUDATE - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glial cells: Low
Neuronal cells: High
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
GTEx:531.1 nTPM
FANTOM5:411.8 Scaled Tags Per Million
Pig:173.2 nTPM

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA042582
Glial cells Low
Neuronal cells High



CAUDATE - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

531.1
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 531.1
Samples: 246

Max nTPM: 1510.5
Min nTPM: 207.6
Std nTPM: 184.6
Median nTPM: 511.1
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 1510.5
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 1440.4
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 1280.1
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 1257.7
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 1071.1
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 963.8
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 948.8
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 896.6
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 888.4
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 876.1
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 864.6
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 861.8
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 843.5
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 827.1
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 816.4
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 801.2
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 797.3
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 791.9
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 775.8
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 771.6
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 764.9
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 764.4
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 753.0
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 736.3
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 721.7
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 715.8
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 711.2
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 708.9
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 706.6
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 700.7
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 699.8
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 696.7
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 692.5
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 692.1
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 689.7
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 687.9
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 687.5
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 679.5
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 677.9
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 676.9
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 675.8
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 673.8
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 665.5
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 665.3
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 655.0
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 653.3
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 652.0
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 651.5
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 648.3
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 647.7
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 641.1
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 637.3
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 624.6
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 624.2
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 615.9
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 615.7
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 614.3
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 611.8
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 609.9
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 606.5
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 605.7
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 603.6
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 603.1
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 598.0
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 596.6
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 595.9
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 592.7
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 591.5
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 591.1
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 587.8
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 587.1
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 586.4
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 584.3
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 582.6
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 580.6
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 578.2
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 577.6
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 574.1
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 574.1
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 574.1
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 573.3
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 569.0
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 566.3
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 565.5
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 564.7
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 563.6
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 562.1
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 562.0
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 557.6
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 555.8
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 555.6
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 555.5
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 555.3
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 549.6
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 549.3
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 548.1
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 547.2
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 546.2
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 543.8
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 543.7
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 538.4
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 537.3
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 533.2
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 532.6
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 532.4
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 529.6
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 529.5
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 529.2
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 528.3
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 526.1
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 524.3
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 524.2
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 521.9
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 521.5
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 521.3
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 520.1
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 517.6
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 517.1
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 515.3
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 515.0
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 513.5
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 513.2
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 513.1
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 509.0
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 507.8
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 505.7
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 505.6
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 505.0
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 505.0
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 504.2
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 504.2
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 499.8
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 497.6
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 497.1
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 494.9
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 494.8
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 494.3
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 493.5
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 492.9
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 491.4
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 489.4
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 488.6
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 488.1
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 487.5
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 486.6
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 485.5
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 477.1
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 476.8
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 476.8
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 475.1
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 474.0
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 472.0
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 468.7
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 467.5
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 466.5
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 464.9
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 464.9
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 463.2
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 461.0
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 460.6
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 458.5
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 451.4
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 450.2
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 446.3
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 445.9
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 441.7
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 438.5
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 437.5
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 436.5
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 434.4
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 429.3
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 424.4
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 422.5
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 421.8
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 420.2
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 417.4
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 416.0
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 415.8
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 412.0
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 411.8
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 409.7
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 409.5
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 408.7
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 408.5
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 406.4
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 406.2
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 406.2
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 405.9
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 405.0
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 401.8
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 401.2
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 394.3
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 393.8
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 388.3
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 385.5
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 382.2
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 377.5
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 375.7
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 372.3
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 370.2
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 369.6
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 368.7
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 368.7
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 368.4
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 367.3
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 364.2
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 361.6
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 361.3
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 361.3
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 361.2
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 357.1
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 354.3
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 354.1
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 353.3
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 353.2
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 350.8
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 347.6
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 345.4
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 345.0
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 336.7
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 336.5
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 336.0
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 334.8
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 329.0
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 326.1
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 324.0
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 322.4
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 321.9
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 317.3
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 315.3
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 314.7
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 310.1
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 307.2
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 306.9
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 305.3
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 292.9
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 292.1
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 291.2
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 287.7
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 285.4
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 269.9
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 268.9
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 268.3
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 257.9
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 236.1
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 207.6
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CAUDATE - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

411.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 411.8
FF:10164-103B2 76 years, female 411.8

CAUDATE - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

173.2
Pig sample Sample description nTPM
Caudate
nTPM: 173.2
Samples: 4

Max nTPM: 184.2
Min nTPM: 151.3
Sample A Female 176.0
Sample B Female 184.2
Sample C Male 181.2
Sample D Male 151.3

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